ClCG04G001902 (gene) Watermelon (Charleston Gray) v2.5

InterPro
Analysis Name: InterPro Annotations of Watermelon (Charleston Gray) v2.5
Date Performed: 2022-01-31
Position :
0
Zoom :
x 1
ATGGGTTGTGTGTTGGGGCAGCATGACTCTACAGGAAGGAAAGAGCAAGCTGTTTATTATTTGAGCAAGAAGTTCACAAGTTACGAGTTGAAATACTCATTGTTAGAAAAAACATGTTGTGCCTTAGCGTGGACAGCTCAAAGATTGAGACAGTATATGTTGTATTACACAACATTGCTTATCTCAAAAATGGATCCTATAAAGTACATTTTTGAAAAGCCATCTTTGTCTGGTAGAATAGCCAAATGGCAGGTATTGCTATCAGAATATGATATTGTCTATGTCACCAAAAAGGCCATAAAAGGGAGTGCAATTGCCGATTGTCTAGCTGAATTACCTGTTGAAGACTACGAGCCAATGAAATTTGAATTTCCGGATGAAGACATCATGACGATATCCACATTGAATGCAACACAAGATCCTGAAACATGGACAATGTTGTTTGATGGAGCCACGAACGAAATGGGGCATGGTGTAGGGGCTATTTTGATATCTCCTGATGGGAAGTTGTATCCTTTAACTGCTAAATTATACTTCGATTGCACGAATAACATGGCTGAGTATGAAGCATGCAGTATGGGAATTCAGATGGCCTATGACATGAAGATAAAAAAACTGCAAGTTTTCGGGGATTCTCTTTTAGTAGTACATCAATTGAATGGGGAGTGGGAGACAAGAGACTCTAAATTGATTCCCTATAATAAGTATATCCGAGAATTGGCCCAAACTTTTGAGTCAATCACGTTCGAGCATGTCCCACGCGAAAATAACCAGGTTGCGGATGCATTGGCCACCTTGTCTGCCATGTTTAATGTGGCTCGCAATGAAGAAATTCAGCCTATAAGTATTGAGAAGCGTGAAACACCAGCATATTGCCTAAGTGTTGAGCAGGAACCTGACGGGAAGCCTTGGTATCATGACATTAAGCACTACATCACATGTCGAGAATATCCGCTAGGAGCTTCTGAAAACGATAAGCGCACCATTAGAAAGTTGGCCATGAGTTTCTTTTTGAATGGAGATGTGTTGTACAAGAGAAATTACGATATGACTCTCCTGAGATGTGTTGATGCTTTTGAAGCAAAGAGAATTCTAGAAGAAGTTCACGAGGGAGTTTGTGGGACGCATACAAATGGACACATGATGTCAAGACAAGCTTTACGTGCGGGATATTATTGGTTGACTATGGAGTCAGATTGCATTAAGTATGCAAGAAAATGCCACAAATGCCAGATATATGCAGATAAAGTGCATGCTCCATCTTCCCCCCTACACGTGTTAACGGCCTCGTGGCCTTTCTCTATGTGGGGAATGGATGTAATTGGGCCCATTGAGCCAAAGGTGTCAAATGGTCATCGATTCATTTTGGTAGCCATAAACTACTTTACTAAGTGGGTGGAGGCTGCCTCGTACAAGAGTGTTACCAAGCAAGCCGTTGTCAAGTTCATAAGAAAGGACATTATATGTTGGTATGGCTTGCCTAAACGTATCATCACTGATAATGGGAGGAACTTAAATAACAAATTGATGGAGGAATTGTGTACCCAGTTCAAAGTCAAACATTCTAACACTACTCCTTATCGCCCTAGGATGAATGGAGCAGTGGAGGCGGCAAATAAAAATATCAAGAGAATTATCCAGAAAATGACGGTCACATATAAAGATTGGCATGAAATGTTACCGTTTGCGCTACACGGTTACCGAACATCAGTTCGTACATCGACTGGGGCAACGCCATTTTCTTTGGTGTATGGTTTGGAGGCTGTCTTGCCTATTGAGGTCGAGGTGCCATCCCTCACGGTAATTCAAGAAGTAGAGTTAGAAGAAGCAGAATGGATTCAAACAAGAAAAGTTCGACGTCGTTGTTTTCAGGAAGGAGATTTGGTGTTGAAAAGGATCTTGCCATCTCAGAAGGATCATAGAGGAAAGTGGACCCCTAATTATGAGGGACCATATGTGGTAAAAAAGGCATTCACTGGAGGAGCTTTGATTTTGACAAATATGGATGGGACCGATTTGCCCAATCCGTTAAGTGTAGATTACGTGAAGAAGTACTATGCATAG200400600800100012001400160018002000Expect = 1.8E-12 / Score = 47.4Score = 23.540461Expect = 2.3E-13 / Score = 52.2Score = Score = Expect = 1.63815E-45 / Score = 156.479Expect = 2.3E-54 / Score = 185.7Expect = 1.3E-32 / Score = 114.6Expect = 9.7E-18 / Score = 64.4Expect = 1.4E-7 / Score = 31.4Expect = 1.9E-24 / Score = 85.8Score = 15.590564Score = Score = Score = SequencePF00665PS50994G3DSA:1.10.340.70PTHR24559:SF322PTHR24559cd09279G3DSA:3.30.420.10G3DSA:3.30.420.10PF17917PF17921PF13456PS50879SSF53098SSF53098SSF56672
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001584Integrase, catalytic corePFAMPF00665rvecoord: 432..529
e-value: 1.8E-12
score: 47.4
IPR001584Integrase, catalytic corePROSITEPS50994INTEGRASEcoord: 428..587
score: 23.540461
NoneNo IPR availableGENE3D1.10.340.70coord: 322..413
e-value: 2.3E-13
score: 52.2
NoneNo IPR availablePANTHERPTHR24559:SF322RNA-DIRECTED DNA POLYMERASE (REVERSE TRANSCRIPTASE), RIBONUCLEASE H-LIKE PROTEINcoord: 12..505
NoneNo IPR availablePANTHERPTHR24559TRANSPOSON TY3-I GAG-POL POLYPROTEINcoord: 12..505
NoneNo IPR availableCDDcd09279RNase_HI_likecoord: 144..266
e-value: 1.63815E-45
score: 156.479
IPR036397Ribonuclease H superfamilyGENE3D3.30.420.10coord: 424..623
e-value: 2.3E-54
score: 185.7
IPR036397Ribonuclease H superfamilyGENE3D3.30.420.10coord: 145..282
e-value: 1.3E-32
score: 114.6
IPR041373Reverse transcriptase, RNase H-like domainPFAMPF17917RT_RNaseHcoord: 1..90
e-value: 9.7E-18
score: 64.4
IPR041588Integrase zinc-binding domainPFAMPF17921Integrase_H2C2coord: 361..413
e-value: 1.4E-7
score: 31.4
IPR002156Ribonuclease H domainPFAMPF13456RVT_3coord: 148..265
e-value: 1.9E-24
score: 85.8
IPR002156Ribonuclease H domainPROSITEPS50879RNASE_Hcoord: 140..269
score: 15.590564
IPR012337Ribonuclease H-like superfamilySUPERFAMILY53098Ribonuclease H-likecoord: 430..593
IPR012337Ribonuclease H-like superfamilySUPERFAMILY53098Ribonuclease H-likecoord: 142..264
IPR043502DNA/RNA polymerase superfamilySUPERFAMILY56672DNA/RNA polymerasescoord: 2..90