Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCTAAACTTTGGTTTCTTTGCCTCATTGTGGCCGAGATCTTGCTGATTCAAGCAATGGCTTCGGATCTCCTTCTGTCTGCGGCGCCGGAGCCACTAGAGACCGGGACTAGAGAAGGGTATGGAGTGGCGGAGGCGCCAGAGATCCGGCGACTGGGAAAGCACCACGGCGATGACTCTGTGGCCGGCGGGGGAGTCATCATCGGCGGCCTTGTAACGGCAATTTTTGCAGCTGTTTTCTGTTATATTCGGGTTACTAAAAAAAAAGATGGAGTTGATTCGGTTCATTGA
mRNA sequence
ATGGCTAAACTTTGGTTTCTTTGCCTCATTGTGGCCGAGATCTTGCTGATTCAAGCAATGGCTTCGGATCTCCTTCTGTCTGCGGCGCCGGAGCCACTAGAGACCGGGACTAGAGAAGGGTATGGAGTGGCGGAGGCGCCAGAGATCCGGCGACTGGGAAAGCACCACGGCGATGACTCTGTGGCCGGCGGGGGAGTCATCATCGGCGGCCTTGTAACGGCAATTTTTGCAGCTGTTTTCTGTTATATTCGGGTTACTAAAAAAAAAGATGGAGTTGATTCGGTTCATTGA
Coding sequence (CDS)
ATGGCTAAACTTTGGTTTCTTTGCCTCATTGTGGCCGAGATCTTGCTGATTCAAGCAATGGCTTCGGATCTCCTTCTGTCTGCGGCGCCGGAGCCACTAGAGACCGGGACTAGAGAAGGGTATGGAGTGGCGGAGGCGCCAGAGATCCGGCGACTGGGAAAGCACCACGGCGATGACTCTGTGGCCGGCGGGGGAGTCATCATCGGCGGCCTTGTAACGGCAATTTTTGCAGCTGTTTTCTGTTATATTCGGGTTACTAAAAAAAAAGATGGAGTTGATTCGGTTCATTGA
Protein sequence
MAKLWFLCLIVAEILLIQAMASDLLLSAAPEPLETGTREGYGVAEAPEIRRLGKHHGDDSVAGGGVIIGGLVTAIFAAVFCYIRVTKKKDGVDSVH
Homology
BLAST of ClCG02G001520 vs. NCBI nr
Match:
KAA0031619.1 (hypothetical protein E6C27_scaffold139G003870 [Cucumis melo var. makuwa] >TYK07071.1 hypothetical protein E5676_scaffold13G003890 [Cucumis melo var. makuwa])
HSP 1 Score: 147.5 bits (371), Expect = 5.8e-32
Identity = 84/102 (82.35%), Postives = 86/102 (84.31%), Query Frame = 0
Query: 1 MAKLWFL-CLIVAEILLIQAMAS-----DLLLSAAPEPLETGTREGYGVAEAPEIRRLGK 60
MAK L CLIVAEILLIQAM S DL LSAAPEP E GTREG VAEAPEIRRLGK
Sbjct: 1 MAKTCLLFCLIVAEILLIQAMTSIATTTDLPLSAAPEPAEKGTREGSDVAEAPEIRRLGK 60
Query: 61 HHGDDSVAGGGVIIGGLVTAIFAAVFCYIRVTKKKDGVDSVH 97
HHGD SVAGGGVIIGGLVTAIFAAVFCYIRVT+K+DGVDSVH
Sbjct: 61 HHGDKSVAGGGVIIGGLVTAIFAAVFCYIRVTRKRDGVDSVH 102
BLAST of ClCG02G001520 vs. NCBI nr
Match:
KAG6572323.1 (hypothetical protein SDJN03_29051, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 138.7 bits (348), Expect = 2.7e-29
Identity = 76/101 (75.25%), Postives = 84/101 (83.17%), Query Frame = 0
Query: 1 MAKLWFLCLIVAEILLIQAMASDLL-----LSAAPEPLETGTREGYGVAEAPEIRRLGKH 60
MAK+ LCLI+A+ILLIQAMAS +SAAPEP ET EG G+AEAPEIRRLGKH
Sbjct: 1 MAKISLLCLILAQILLIQAMASTATTTTSHVSAAPEPSETDNVEGPGLAEAPEIRRLGKH 60
Query: 61 HGDDSVAGGGVIIGGLVTAIFAAVFCYIRVTKKKDGVDSVH 97
H D SVAGGGVIIGGLVTA+FAAVFCYIRVT+K+DGVDSVH
Sbjct: 61 HVDKSVAGGGVIIGGLVTAVFAAVFCYIRVTRKRDGVDSVH 101
BLAST of ClCG02G001520 vs. NCBI nr
Match:
KAG7011935.1 (hypothetical protein SDJN02_26843, partial [Cucurbita argyrosperma subsp. argyrosperma])
HSP 1 Score: 134.8 bits (338), Expect = 3.9e-28
Identity = 75/101 (74.26%), Postives = 83/101 (82.18%), Query Frame = 0
Query: 1 MAKLWFLCLIVAEILLIQAMASDLL-----LSAAPEPLETGTREGYGVAEAPEIRRLGKH 60
MAK+ L LI+A+ILLIQAMAS +SAAPEP ET EG G+AEAPEIRRLGKH
Sbjct: 1 MAKISLLSLILAQILLIQAMASTATTTTSHVSAAPEPSETDNVEGPGLAEAPEIRRLGKH 60
Query: 61 HGDDSVAGGGVIIGGLVTAIFAAVFCYIRVTKKKDGVDSVH 97
H D SVAGGGVIIGGLVTA+FAAVFCYIRVT+K+DGVDSVH
Sbjct: 61 HVDKSVAGGGVIIGGLVTAVFAAVFCYIRVTRKRDGVDSVH 101
BLAST of ClCG02G001520 vs. NCBI nr
Match:
KAE8645753.1 (hypothetical protein Csa_020263 [Cucumis sativus])
HSP 1 Score: 111.3 bits (277), Expect = 4.6e-21
Identity = 65/91 (71.43%), Postives = 71/91 (78.02%), Query Frame = 0
Query: 1 MAKLWFL-CLIVAEILLIQAM------ASDLLLSAAPEPLETGTREGYGVAEAPEIRRLG 60
MAK+ L CLIV EI LIQA+ ++L LS APE E GTREG VAEAPEIRRLG
Sbjct: 1 MAKICLLFCLIVGEIFLIQAITTSIATTTELPLSVAPESSEKGTREGSEVAEAPEIRRLG 60
Query: 61 KHHGDDSVAGGGVIIGGLVTAIFAAVFCYIR 85
KHHGD S+AGGGVIIGGLVTA+FAAVFCYIR
Sbjct: 61 KHHGDKSMAGGGVIIGGLVTAVFAAVFCYIR 91
BLAST of ClCG02G001520 vs. NCBI nr
Match:
KAF3964431.1 (hypothetical protein CMV_011281 [Castanea mollissima])
HSP 1 Score: 94.7 bits (234), Expect = 4.5e-16
Identity = 51/82 (62.20%), Postives = 59/82 (71.95%), Query Frame = 0
Query: 11 VAEILLIQAMASDLLLSAAPEPLETGTREGYGVAEAPEIRRLGKHHGDDSVAGGGVIIGG 70
V + ++ +A + S A P G +E VAEAP IRRLGKHH D SVAGGGVIIGG
Sbjct: 111 VGTLRVVARLADQPVSSVAESP--EGNKENSNVAEAPVIRRLGKHHSDKSVAGGGVIIGG 170
Query: 71 LVTAIFAAVFCYIRVTKKKDGV 93
LVTAIFAAVFCYIRVT+K+D V
Sbjct: 171 LVTAIFAAVFCYIRVTRKRDDV 190
BLAST of ClCG02G001520 vs. ExPASy TrEMBL
Match:
A0A5D3C590 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold13G003890 PE=4 SV=1)
HSP 1 Score: 147.5 bits (371), Expect = 2.8e-32
Identity = 84/102 (82.35%), Postives = 86/102 (84.31%), Query Frame = 0
Query: 1 MAKLWFL-CLIVAEILLIQAMAS-----DLLLSAAPEPLETGTREGYGVAEAPEIRRLGK 60
MAK L CLIVAEILLIQAM S DL LSAAPEP E GTREG VAEAPEIRRLGK
Sbjct: 1 MAKTCLLFCLIVAEILLIQAMTSIATTTDLPLSAAPEPAEKGTREGSDVAEAPEIRRLGK 60
Query: 61 HHGDDSVAGGGVIIGGLVTAIFAAVFCYIRVTKKKDGVDSVH 97
HHGD SVAGGGVIIGGLVTAIFAAVFCYIRVT+K+DGVDSVH
Sbjct: 61 HHGDKSVAGGGVIIGGLVTAIFAAVFCYIRVTRKRDGVDSVH 102
BLAST of ClCG02G001520 vs. ExPASy TrEMBL
Match:
A0A0A0K3N0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G045480 PE=4 SV=1)
HSP 1 Score: 134.0 bits (336), Expect = 3.2e-28
Identity = 75/103 (72.82%), Postives = 83/103 (80.58%), Query Frame = 0
Query: 1 MAKLWFL-CLIVAEILLIQAM------ASDLLLSAAPEPLETGTREGYGVAEAPEIRRLG 60
MAK+ L CLIV EI LIQA+ ++L LS APE E GTREG VAEAPEIRRLG
Sbjct: 1 MAKICLLFCLIVGEIFLIQAITTSIATTTELPLSVAPESSEKGTREGSEVAEAPEIRRLG 60
Query: 61 KHHGDDSVAGGGVIIGGLVTAIFAAVFCYIRVTKKKDGVDSVH 97
KHHGD S+AGGGVIIGGLVTA+FAAVFCYIRVT+K+DGVDSVH
Sbjct: 61 KHHGDKSMAGGGVIIGGLVTAVFAAVFCYIRVTRKRDGVDSVH 103
BLAST of ClCG02G001520 vs. ExPASy TrEMBL
Match:
A0A2N9IXN3 (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS56997 PE=4 SV=1)
HSP 1 Score: 94.4 bits (233), Expect = 2.8e-16
Identity = 57/118 (48.31%), Postives = 72/118 (61.02%), Query Frame = 0
Query: 1 MAKLWFLCLIVAEILLIQAMAS---------------------DLLLSAAPEPLET---- 60
M +L CLI+AEIL++QAMA ++ A +P+ +
Sbjct: 1 MGRLGLFCLILAEILVVQAMAEKSEGSELNPFGLKAQNKNGALGVVARVADQPVSSIAES 60
Query: 61 -GTREGYGVAEAPEIRRLGKHHGDDSVAGGGVIIGGLVTAIFAAVFCYIRVTKKKDGV 93
++E VAEAP IRR+GKHH D S+AGGGVIIGGL TAIFA VFCYIRVT+K+DGV
Sbjct: 61 PESKEYSDVAEAPVIRRMGKHHSDKSLAGGGVIIGGLATAIFAVVFCYIRVTRKRDGV 118
BLAST of ClCG02G001520 vs. ExPASy TrEMBL
Match:
A5BAN6 (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VITISV_044272 PE=4 SV=1)
HSP 1 Score: 94.0 bits (232), Expect = 3.7e-16
Identity = 52/96 (54.17%), Postives = 67/96 (69.79%), Query Frame = 0
Query: 1 MAKLWFLCLIVAEILLIQAMAS-------DLLLSAAPEPLETGTREGYGVAEAPEIRRLG 60
M +L +CL++AEIL++QA+A ++ A +P G E VAEAP RRLG
Sbjct: 1 MGRLILVCLLLAEILVVQALAGGSGXDPLGSVVRVADQPSPGGGXESLEVAEAPANRRLG 60
Query: 61 KHHGDDSVAGGGVIIGGLVTAIFAAVFCYIRVTKKK 90
KHH D S+AGGGVIIGGL TAIFAAVFCYIR+T+++
Sbjct: 61 KHHVDRSIAGGGVIIGGLATAIFAAVFCYIRITRRR 96
BLAST of ClCG02G001520 vs. ExPASy TrEMBL
Match:
A0A7N2R9A0 (Uncharacterized protein OS=Quercus lobata OX=97700 PE=4 SV=1)
HSP 1 Score: 92.8 bits (229), Expect = 8.3e-16
Identity = 51/82 (62.20%), Postives = 59/82 (71.95%), Query Frame = 0
Query: 11 VAEILLIQAMASDLLLSAAPEPLETGTREGYGVAEAPEIRRLGKHHGDDSVAGGGVIIGG 70
V + ++ +A + S A P G +E VAEAPEIRRLGKHH D SVAGGGVIIGG
Sbjct: 42 VGTLRVVARLADQPVSSVAGSP--EGNKEYSNVAEAPEIRRLGKHHSDKSVAGGGVIIGG 101
Query: 71 LVTAIFAAVFCYIRVTKKKDGV 93
LVTAIFAAVFCYIRVT+K+ V
Sbjct: 102 LVTAIFAAVFCYIRVTRKRADV 121
BLAST of ClCG02G001520 vs. TAIR 10
Match:
AT3G09280.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: root; Has 31 Blast hits to 31 proteins in 9 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 31; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )
HSP 1 Score: 54.3 bits (129), Expect = 6.3e-08
Identity = 39/96 (40.62%), Postives = 51/96 (53.12%), Query Frame = 0
Query: 2 AKLWFLCLIVAEILLIQAMASDLLLSAAPEPLETGTREGYG-VAEAPEIRRL------GK 61
AK LC ++ + + A +S+ + P + G E G AEAPE+ L G
Sbjct: 3 AKHIVLCFLLTYVFSMAAASSE---AEPPATRKLGRHEWPGEEAEAPEVSHLEETVRRGH 62
Query: 62 HHG--DDSVAGGGVIIGGLVTAIFAAVFCYIRVTKK 89
HH + SVAGGGVI+GGL T VFCYIR T+K
Sbjct: 63 HHSTVERSVAGGGVILGGLATTFLVVVFCYIRATRK 95
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| KAA0031619.1 | 5.8e-32 | 82.35 | hypothetical protein E6C27_scaffold139G003870 [Cucumis melo var. makuwa] >TYK070... | [more] |
| KAG6572323.1 | 2.7e-29 | 75.25 | hypothetical protein SDJN03_29051, partial [Cucurbita argyrosperma subsp. sorori... | [more] |
| KAG7011935.1 | 3.9e-28 | 74.26 | hypothetical protein SDJN02_26843, partial [Cucurbita argyrosperma subsp. argyro... | [more] |
| KAE8645753.1 | 4.6e-21 | 71.43 | hypothetical protein Csa_020263 [Cucumis sativus] | [more] |
| KAF3964431.1 | 4.5e-16 | 62.20 | hypothetical protein CMV_011281 [Castanea mollissima] | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| Match Name | E-value | Identity | Description | |
|---|
| A0A5D3C590 | 2.8e-32 | 82.35 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... | [more] |
| A0A0A0K3N0 | 3.2e-28 | 72.82 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G045480 PE=4 SV=1 | [more] |
| A0A2N9IXN3 | 2.8e-16 | 48.31 | Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS56997 PE=4 SV=1 | [more] |
| A5BAN6 | 3.7e-16 | 54.17 | Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VITISV_044272 PE=4 SV=1 | [more] |
| A0A7N2R9A0 | 8.3e-16 | 62.20 | Uncharacterized protein OS=Quercus lobata OX=97700 PE=4 SV=1 | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| AT3G09280.1 | 6.3e-08 | 40.63 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... | [more] |
