ClCG01G011070.1 (mRNA) Watermelon (Charleston Gray) v2.5

Overview


Name	ClCG01G011070.1
Type	mRNA
Organism	Citrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
Description	Unknown protein
Location	CG_Chr01: 17581216 .. 17581689 (-)
Sequence length	348
RNA-Seq Expression	ClCG01G011070.1
Synteny	ClCG01G011070.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTTGATGCAGCTTCACTTTGTCTCCAAAATGCTGATGCAGCTTCGCTCCATCTCCAAATATGCTGATGCTGCTTCGCTCATCTCCAAAGTGTTGGTGTCGCTTCATGCCATCTCCAAAATGTTGGTGTGGCTTTGCTCTATCTCCAAAATGTTGGTGCTGCTTTGTCTCCTCTATGAAATGTTGGTGCAGCTTTGATCCTACTTCGAAATGTTGGTGCAACTTTTCTCCTACTTTGAAATGCTGGTGTAGCTCCGCTCCTCCTCCAAAATGATGGTGAAGCTTTGCTCCTCCTCCAAAATGTTGGTGCAACTCTACTCTTCCTCCAAGATGTTGGTGCAGCTAAGCTCATCCTCTGAAATAATGGTGCAACTCAAGTTTGATGCTTTGGTGCTGATTCTCTACCTCCAAGTTGATGGTTGCACCGCTGTTTTTCCATCTCCAAGTTTGATGGTTGCACGAATTGTTGCCTGA

mRNA sequence

ATGTTGATGCAGCTTCACTTTGTCTCCAAAATGCTGATGCAGCTTCGCTCCATCTCCAAATATGCTGATGCTGCTTCGCTCATCTCCAAAGTGTTGGTGTCGCTTCATGCCATCTCCAAAATGTTGCTCCGCTCCTCCTCCAAAATGATGGTGAAGCTTTGCTCCTCCTCCAAAATGTTGGTGCAACTCTACTCTTCCTCCAAGATGTTGGTGCAGCTAAGCTCATCCTCTGAAATAATGGTGCAACTCAAGTTTGATGCTTTGGTGCTGATTCTCTACCTCCAAGTTGATGGTTGCACCGCTGTTTTTCCATCTCCAAGTTTGATGGTTGCACGAATTGTTGCCTGA

Coding sequence (CDS)

ATGTTGATGCAGCTTCACTTTGTCTCCAAAATGCTGATGCAGCTTCGCTCCATCTCCAAATATGCTGATGCTGCTTCGCTCATCTCCAAAGTGTTGGTGTCGCTTCATGCCATCTCCAAAATGTTGCTCCGCTCCTCCTCCAAAATGATGGTGAAGCTTTGCTCCTCCTCCAAAATGTTGGTGCAACTCTACTCTTCCTCCAAGATGTTGGTGCAGCTAAGCTCATCCTCTGAAATAATGGTGCAACTCAAGTTTGATGCTTTGGTGCTGATTCTCTACCTCCAAGTTGATGGTTGCACCGCTGTTTTTCCATCTCCAAGTTTGATGGTTGCACGAATTGTTGCCTGA

Protein sequence

MLMQLHFVSKMLMQLRSISKYADAASLISKVLVSLHAISKMLLRSSSKMMVKLCSSSKMLVQLYSSSKMLVQLSSSSEIMVQLKFDALVLILYLQVDGCTAVFPSPSLMVARIVA

Homology

The following BLAST results are available for this feature:

BLAST of ClCG01G011070.1 vs.


Match Name	E-value	Identity	Description

BLAST of ClCG01G011070.1 vs.


Match Name	E-value	Identity	Description

BLAST of ClCG01G011070.1 vs.


Match Name	E-value	Identity	Description

BLAST of ClCG01G011070.1 vs.


Match Name	E-value	Identity	Description

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
ClCG01G011070	ClCG01G011070	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
ClCG01G011070.1-exon	ClCG01G011070.1-exon-CG_Chr01:17581216..17581437	exon
ClCG01G011070.1-exon	ClCG01G011070.1-exon-CG_Chr01:17581564..17581689	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
ClCG01G011070.1-cds	ClCG01G011070.1-cds-CG_Chr01:17581216..17581437	CDS
ClCG01G011070.1-cds	ClCG01G011070.1-cds-CG_Chr01:17581564..17581689	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
ClCG01G011070.1	ClCG01G011070.1-protein	polypeptide