CcUC10G204850 (gene) Watermelon (PI 537277) v1

Overview


Name	CcUC10G204850
Type	gene
Organism	Citrullus colocynthis (Watermelon (PI 537277) v1)
Description	Unknown protein
Location	CicolChr10: 32122166 .. 32122753 (-)
RNA-Seq Expression	CcUC10G204850
Synteny	CcUC10G204850

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCTCCGAGGCCAGGACCGATGGTGGAGCCATTGACAACTTCACCCAAGTTCGAAAGCGAGGCCCCCATCGCCGGCGACGGCAGAGTTCCAAATCAAAACCTCAAAACTTCCCACAATTTCTTCAGGTCATCTTCATCACCGGCGGCAAAAAGAACCTTCAAGATTGGTTTTAAGCACAAAACCGCGTCCCACGTCCGGCAGTTTTAGCAATTTCGAACCCAGACACGGATTTCGATGAAAACCCACAAATAAATACAATTTCTAAAGAGAACTTTTGCCTTTTCCGGACAGGAAAGTGGGTGGGGGAAAGGCAAATGGGGGCAAAAACCAAAAGGGGTCGCGACAAGCGAGCTACAAGGAAAAGTAACGAAGAGAGGAAACGACGCGACGGATTTAGGCTGTGAAAATTCACCAAATCGAAGAGAATTTTGGAGGGCTAAGCCCAGGTGGAAGGAAGCGAGTGGTGGGTCGTTGGGGAATTTACTACTTGTGATGATTTGGATTTGGGTTTTCTTATCTCGGCCATTGAAGAACTTCGAAGCCCCGACTATGGGTCATAGATGGAGAGCAAGTGGAAGACTTTGA

mRNA sequence

ATGTCTCCGAGGCCAGGACCGATGGTGGAGCCATTGACAACTTCACCCAAGTTCGAAAGCGAGGCCCCCATCGCCGGCGACGGCAGAGTTCCAAATCAAAACCTCAAAACTTCCCACAATTTCTTCAGGTCATCTTCATCACCGGCGGCAAAAAGAACCTTCAAGATTGGTTTTAAGCACAAAACCGCGTCCCACGAAAGTGGGTGGGGGAAAGGCAAATGGGGGCAAAAACCAAAAGGGGTCGCGACAAGCGAGCTACAAGGAAAAGTAACGAAGAGAGGAAACGACGCGACGGATTTAGGCTGTGAAAATTCACCAAATCGAAGAGAATTTTGGAGGGCTAAGCCCAGGTGGAAGGAAGCGAGTGGTGGGTCGTTGGGGAATTTACTACTTGTGATGATTTGGATTTGGGTTTTCTTATCTCGGCCATTGAAGAACTTCGAAGCCCCGACTATGGGTCATAGATGGAGAGCAAGTGGAAGACTTTGA

Coding sequence (CDS)

ATGTCTCCGAGGCCAGGACCGATGGTGGAGCCATTGACAACTTCACCCAAGTTCGAAAGCGAGGCCCCCATCGCCGGCGACGGCAGAGTTCCAAATCAAAACCTCAAAACTTCCCACAATTTCTTCAGGTCATCTTCATCACCGGCGGCAAAAAGAACCTTCAAGATTGGTTTTAAGCACAAAACCGCGTCCCACGAAAGTGGGTGGGGGAAAGGCAAATGGGGGCAAAAACCAAAAGGGGTCGCGACAAGCGAGCTACAAGGAAAAGTAACGAAGAGAGGAAACGACGCGACGGATTTAGGCTGTGAAAATTCACCAAATCGAAGAGAATTTTGGAGGGCTAAGCCCAGGTGGAAGGAAGCGAGTGGTGGGTCGTTGGGGAATTTACTACTTGTGATGATTTGGATTTGGGTTTTCTTATCTCGGCCATTGAAGAACTTCGAAGCCCCGACTATGGGTCATAGATGGAGAGCAAGTGGAAGACTTTGA

Protein sequence

MSPRPGPMVEPLTTSPKFESEAPIAGDGRVPNQNLKTSHNFFRSSSSPAAKRTFKIGFKHKTASHESGWGKGKWGQKPKGVATSELQGKVTKRGNDATDLGCENSPNRREFWRAKPRWKEASGGSLGNLLLVMIWIWVFLSRPLKNFEAPTMGHRWRASGRL

Homology

The following BLAST results are available for this feature:

BLAST of CcUC10G204850 vs.


Match Name	E-value	Identity	Description

BLAST of CcUC10G204850 vs.


Match Name	E-value	Identity	Description

BLAST of CcUC10G204850 vs.


Match Name	E-value	Identity	Description

BLAST of CcUC10G204850 vs.


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..48
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 31..48
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 62..102

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CcUC10G204850.1	CcUC10G204850.1	mRNA