CcUC10G201760.1 (mRNA) Watermelon (PI 537277) v1

Overview


Name	CcUC10G201760.1
Type	mRNA
Organism	Citrullus colocynthis (Watermelon (PI 537277) v1)
Description	protein ROOT PRIMORDIUM DEFECTIVE 1
Location	CicolChr10: 28971750 .. 28973009 (-)
Sequence length	1260
RNA-Seq Expression	CcUC10G201760.1
Synteny	CcUC10G201760.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGGTATGAAATTTCATTTGAATCCGCATTGTCTCTTTCGAAATCTACTTTTTCCAGAATCCCATTCGGCCCCTTCAATCATTTCTGTCAAAGGAGATGGAGAAAGCCAGTGGAAAACGCTCAAACTCGATTAGAAGATAGAACAAGGGATCTCAAGCTCGACAAACTCGCAACCCAACTTCGAAAATTCAGGATAATCCTCAAACTCCATGAGCTCATGATCGATCGGAAACGCGGGCCTTTTGTCTCCTTACAAATCATGTCTCGATGGCGAAACATTGTTGGACTTAAAATCGGAATTGGGGAGTTCGTTCATAAGTACCCCCATGTGTTCGACGTATTTCCCCATCCTGTAAGGAGGAATTTATGCTGTAGAATCACCGGAAAGATGGCTGCCTTGATGAAACAAGAGGAGAATGTTATTAACGATCTCGAAATCGAGACTGTACAGCGATTGAAGAAGTTGCTAATGATGTCTGTCAATGGGGCTCTTCATGTTCATGCTTTGAGACTAATCAGCAAGGAATTGGGGTTGCCTGATGGGTTTAGAGAATCGATTCTTGAGAAGTATTCGGATGATTTCAGATTGGTTGATTTGGAGATTGTTGAATTGGTTGAGAAACATGAGAATGGAGTTGTGGCTGAGGTTGAACAATGGAGGGAAAGAGAGTTTAGAGAGAAATGGCTGAGCGAATTCGATGTTAAATATGCCTTTCCTATTAACTTCCCAACTGGGTTTAGAATAGAGGGAGGTTTTAGAGAGAAAATGAGGAATTGGCAGAGGCTTCCATATGTAAAACCATATGAGAAGAGACAAGGCTTTGGTTTTCGTCCTTCTGGGGCGATGCAGCGCCATGAGAAGCGAGCTGTGGCTGTTCTTCATGAGCTTTTGAGCTTGACTGTGGAAAAGCTGGTTGATGTTGAGCGACTTGCCCATTTTAGGAGAGATTTCGCCATCGAAGTCAATATCCGTGAGCTTCTACTGAAGCACCCTGGGATATTCTACATATCAACCAAGGGGAACACTCAATTCGTTTTCCTTAGAGAGGCTTATGCTAAAGGGTGCTTGGTAGATCCCAATCCAATATACATTGTTAGAAGGAAGATGCAGGACCTTGTTCTCTTAGGACGTCGACACACCAAGCAGTTGGAATCATCCATGGAAATCAAGGAAAATGACAATGCAGCCTATAATGAGGACTGGTTATCTAAAAGTGAAGGGAGCTGGGTTTTGCCAATACTACAGGGCTTTGATTGA

mRNA sequence

ATGAGGTATGAAATTTCATTTGAATCCGCATTGTCTCTTTCGAAATCTACTTTTTCCAGAATCCCATTCGGCCCCTTCAATCATTTCTGTCAAAGGAGATGGAGAAAGCCAGTGGAAAACGCTCAAACTCGATTAGAAGATAGAACAAGGGATCTCAAGCTCGACAAACTCGCAACCCAACTTCGAAAATTCAGGATAATCCTCAAACTCCATGAGCTCATGATCGATCGGAAACGCGGGCCTTTTGTCTCCTTACAAATCATGTCTCGATGGCGAAACATTGTTGGACTTAAAATCGGAATTGGGGAGTTCGTTCATAAGTACCCCCATGTGTTCGACGTATTTCCCCATCCTGTAAGGAGGAATTTATGCTGTAGAATCACCGGAAAGATGGCTGCCTTGATGAAACAAGAGGAGAATGTTATTAACGATCTCGAAATCGAGACTGTACAGCGATTGAAGAAGTTGCTAATGATGTCTGTCAATGGGGCTCTTCATGTTCATGCTTTGAGACTAATCAGCAAGGAATTGGGGTTGCCTGATGGGTTTAGAGAATCGATTCTTGAGAAGTATTCGGATGATTTCAGATTGGTTGATTTGGAGATTGTTGAATTGGTTGAGAAACATGAGAATGGAGTTGTGGCTGAGGTTGAACAATGGAGGGAAAGAGAGTTTAGAGAGAAATGGCTGAGCGAATTCGATGTTAAATATGCCTTTCCTATTAACTTCCCAACTGGGTTTAGAATAGAGGGAGGTTTTAGAGAGAAAATGAGGAATTGGCAGAGGCTTCCATATGTAAAACCATATGAGAAGAGACAAGGCTTTGGTTTTCGTCCTTCTGGGGCGATGCAGCGCCATGAGAAGCGAGCTGTGGCTGTTCTTCATGAGCTTTTGAGCTTGACTGTGGAAAAGCTGGTTGATGTTGAGCGACTTGCCCATTTTAGGAGAGATTTCGCCATCGAAGTCAATATCCGTGAGCTTCTACTGAAGCACCCTGGGATATTCTACATATCAACCAAGGGGAACACTCAATTCGTTTTCCTTAGAGAGGCTTATGCTAAAGGGTGCTTGGTAGATCCCAATCCAATATACATTGTTAGAAGGAAGATGCAGGACCTTGTTCTCTTAGGACGTCGACACACCAAGCAGTTGGAATCATCCATGGAAATCAAGGAAAATGACAATGCAGCCTATAATGAGGACTGGTTATCTAAAAGTGAAGGGAGCTGGGTTTTGCCAATACTACAGGGCTTTGATTGA

Coding sequence (CDS)

ATGAGGTATGAAATTTCATTTGAATCCGCATTGTCTCTTTCGAAATCTACTTTTTCCAGAATCCCATTCGGCCCCTTCAATCATTTCTGTCAAAGGAGATGGAGAAAGCCAGTGGAAAACGCTCAAACTCGATTAGAAGATAGAACAAGGGATCTCAAGCTCGACAAACTCGCAACCCAACTTCGAAAATTCAGGATAATCCTCAAACTCCATGAGCTCATGATCGATCGGAAACGCGGGCCTTTTGTCTCCTTACAAATCATGTCTCGATGGCGAAACATTGTTGGACTTAAAATCGGAATTGGGGAGTTCGTTCATAAGTACCCCCATGTGTTCGACGTATTTCCCCATCCTGTAAGGAGGAATTTATGCTGTAGAATCACCGGAAAGATGGCTGCCTTGATGAAACAAGAGGAGAATGTTATTAACGATCTCGAAATCGAGACTGTACAGCGATTGAAGAAGTTGCTAATGATGTCTGTCAATGGGGCTCTTCATGTTCATGCTTTGAGACTAATCAGCAAGGAATTGGGGTTGCCTGATGGGTTTAGAGAATCGATTCTTGAGAAGTATTCGGATGATTTCAGATTGGTTGATTTGGAGATTGTTGAATTGGTTGAGAAACATGAGAATGGAGTTGTGGCTGAGGTTGAACAATGGAGGGAAAGAGAGTTTAGAGAGAAATGGCTGAGCGAATTCGATGTTAAATATGCCTTTCCTATTAACTTCCCAACTGGGTTTAGAATAGAGGGAGGTTTTAGAGAGAAAATGAGGAATTGGCAGAGGCTTCCATATGTAAAACCATATGAGAAGAGACAAGGCTTTGGTTTTCGTCCTTCTGGGGCGATGCAGCGCCATGAGAAGCGAGCTGTGGCTGTTCTTCATGAGCTTTTGAGCTTGACTGTGGAAAAGCTGGTTGATGTTGAGCGACTTGCCCATTTTAGGAGAGATTTCGCCATCGAAGTCAATATCCGTGAGCTTCTACTGAAGCACCCTGGGATATTCTACATATCAACCAAGGGGAACACTCAATTCGTTTTCCTTAGAGAGGCTTATGCTAAAGGGTGCTTGGTAGATCCCAATCCAATATACATTGTTAGAAGGAAGATGCAGGACCTTGTTCTCTTAGGACGTCGACACACCAAGCAGTTGGAATCATCCATGGAAATCAAGGAAAATGACAATGCAGCCTATAATGAGGACTGGTTATCTAAAAGTGAAGGGAGCTGGGTTTTGCCAATACTACAGGGCTTTGATTGA

Protein sequence

MRYEISFESALSLSKSTFSRIPFGPFNHFCQRRWRKPVENAQTRLEDRTRDLKLDKLATQLRKFRIILKLHELMIDRKRGPFVSLQIMSRWRNIVGLKIGIGEFVHKYPHVFDVFPHPVRRNLCCRITGKMAALMKQEENVINDLEIETVQRLKKLLMMSVNGALHVHALRLISKELGLPDGFRESILEKYSDDFRLVDLEIVELVEKHENGVVAEVEQWREREFREKWLSEFDVKYAFPINFPTGFRIEGGFREKMRNWQRLPYVKPYEKRQGFGFRPSGAMQRHEKRAVAVLHELLSLTVEKLVDVERLAHFRRDFAIEVNIRELLLKHPGIFYISTKGNTQFVFLREAYAKGCLVDPNPIYIVRRKMQDLVLLGRRHTKQLESSMEIKENDNAAYNEDWLSKSEGSWVLPILQGFD

Homology

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BLAST of CcUC10G201760.1 vs. NCBI nr
Match: XP_038903898.1 (protein ROOT PRIMORDIUM DEFECTIVE 1 [Benincasa hispida] >XP_038903899.1 protein ROOT PRIMORDIUM DEFECTIVE 1 [Benincasa hispida] >XP_038903900.1 protein ROOT PRIMORDIUM DEFECTIVE 1 [Benincasa hispida])

HSP 1 Score: 803.9 bits (2075), Expect = 6.6e-229
Identity = 397/419 (94.75%), Postives = 404/419 (96.42%), Query Frame = 0


Query: 1   MRYEISFESALSLSKSTFSRIPFGPFNHFCQRRWRKPVENAQTRLEDRTRDLKLDKLATQ 60
           MRY+IS ESALSLSK   SRIPFGPFNHFCQRRWRKPVENAQTRLEDRTRDLKLDKLATQ
Sbjct: 1   MRYKISLESALSLSKPKISRIPFGPFNHFCQRRWRKPVENAQTRLEDRTRDLKLDKLATQ 60

Query: 61  LRKFRIILKLHELMIDRKRGPFVSLQIMSRWRNIVGLKIGIGEFVHKYPHVFDVFPHPVR 120
            +KFRIILKL ELMIDRKRGPFVSLQIMSRWRNIVGLKIGIGEFVHKYPHVFDVFPHPVR
Sbjct: 61  FQKFRIILKLRELMIDRKRGPFVSLQIMSRWRNIVGLKIGIGEFVHKYPHVFDVFPHPVR 120

Query: 121 RNLCCRITGKMAALMKQEENVINDLEIETVQRLKKLLMMSVNGALHVHALRLISKELGLP 180
           RNLCCRITGKM ALMKQEENVINDLEIETVQRLKKLLMMSVNGALHVHALRLISKELGLP
Sbjct: 121 RNLCCRITGKMTALMKQEENVINDLEIETVQRLKKLLMMSVNGALHVHALRLISKELGLP 180

Query: 181 DGFRESILEKYSDDFRLVDLEIVELVEKHENGVVAEVEQWREREFREKWLSEFDVKYAFP 240
           DGF ESILEKYSDDFRLVDLEIVELVEKHENG VAEVEQWREREFREKWLSEFDVKYAFP
Sbjct: 181 DGFGESILEKYSDDFRLVDLEIVELVEKHENGAVAEVEQWREREFREKWLSEFDVKYAFP 240

Query: 241 INFPTGFRIEGGFREKMRNWQRLPYVKPYEKRQGFGFRPSGAMQRHEKRAVAVLHELLSL 300
           INFPTGFRIEGGFREK+RNWQRLPY KPYEKRQGFGFR SG MQRHEKRAVAVLHELLSL
Sbjct: 241 INFPTGFRIEGGFREKLRNWQRLPYAKPYEKRQGFGFRSSGGMQRHEKRAVAVLHELLSL 300

Query: 301 TVEKLVDVERLAHFRRDFAIEVNIRELLLKHPGIFYISTKGNTQFVFLREAYAKGCLVDP 360
           TVEKLVD+ERL HFRRDFAIEVNIRELLLKHPGIFYISTKGNTQ VFLREAYAKGCL++P
Sbjct: 301 TVEKLVDIERLVHFRRDFAIEVNIRELLLKHPGIFYISTKGNTQIVFLREAYAKGCLIEP 360

Query: 361 NPIYIVRRKMQDLVLLGRRHTKQLESSMEIKENDNAAYNEDWLSKSEGSWVLPILQGFD 420
           NPIYIVRRKMQDLVLLGRRHTKQLESSMEIKEND+AAYN DWLSKSEGSWVLPILQGFD
Sbjct: 361 NPIYIVRRKMQDLVLLGRRHTKQLESSMEIKENDSAAYNGDWLSKSEGSWVLPILQGFD 419

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BLAST of CcUC10G201760.1 vs. NCBI nr
Match: XP_004136766.1 (protein ROOT PRIMORDIUM DEFECTIVE 1 [Cucumis sativus] >XP_011652162.1 protein ROOT PRIMORDIUM DEFECTIVE 1 [Cucumis sativus] >KGN59407.1 hypothetical protein Csa_001413 [Cucumis sativus])

HSP 1 Score: 772.7 bits (1994), Expect = 1.6e-219
Identity = 377/419 (89.98%), Postives = 398/419 (94.99%), Query Frame = 0


Query: 1   MRYEISFESALSLSKSTFSRIPFGPFNHFCQRRWRKPVENAQTRLEDRTRDLKLDKLATQ 60
           MRY I FES + LSK TFSRIPFGPFNHFCQ+RWRKP+ NAQTRLEDRTRDLKLDKLATQ
Sbjct: 1   MRYAILFESPIFLSKPTFSRIPFGPFNHFCQKRWRKPIVNAQTRLEDRTRDLKLDKLATQ 60

Query: 61  LRKFRIILKLHELMIDRKRGPFVSLQIMSRWRNIVGLKIGIGEFVHKYPHVFDVFPHPVR 120
           L+KFR+ILKL+ELM +RKRGPFVSLQIMSRWRNIVG++IGIGEF+HKYPH+FD+FPHPVR
Sbjct: 61  LKKFRVILKLYELMNNRKRGPFVSLQIMSRWRNIVGVRIGIGEFLHKYPHLFDLFPHPVR 120

Query: 121 RNLCCRITGKMAALMKQEENVINDLEIETVQRLKKLLMMSVNGALHVHALRLISKELGLP 180
           RNLCCRITGKM ALMKQEENVIND+EIETVQRLKKLLMMSVNG LHVHALRLIS+ELGLP
Sbjct: 121 RNLCCRITGKMTALMKQEENVINDMEIETVQRLKKLLMMSVNGTLHVHALRLISRELGLP 180

Query: 181 DGFRESILEKYSDDFRLVDLEIVELVEKHENGVVAEVEQWREREFREKWLSEFDVKYAFP 240
           DGFRESILEKYSDDFRLVDLEIVELVEKH+NG +AEVE+WREREFREKWLSEFDVKYAFP
Sbjct: 181 DGFRESILEKYSDDFRLVDLEIVELVEKHKNGAIAEVEKWREREFREKWLSEFDVKYAFP 240

Query: 241 INFPTGFRIEGGFREKMRNWQRLPYVKPYEKRQGFGFRPSGAMQRHEKRAVAVLHELLSL 300
           INFPTGF IEGGFREK+RNWQRLPY +PYEKRQGFG R SG +QRHEKRAVAVLHELLSL
Sbjct: 241 INFPTGFIIEGGFREKLRNWQRLPYTQPYEKRQGFGHRSSGGVQRHEKRAVAVLHELLSL 300

Query: 301 TVEKLVDVERLAHFRRDFAIEVNIRELLLKHPGIFYISTKGNTQFVFLREAYAKGCLVDP 360
           TVEKLVDVERL HFRRDFAIEVNIRELLLKHPGIFYISTKG TQ VFLREAYAKGCLV+P
Sbjct: 301 TVEKLVDVERLVHFRRDFAIEVNIRELLLKHPGIFYISTKGTTQIVFLREAYAKGCLVEP 360

Query: 361 NPIYIVRRKMQDLVLLGRRHTKQLESSMEIKENDNAAYNEDWLSKSEGSWVLPILQGFD 420
           NPIYIVRRKMQDLVLLGRRHTKQLESSMEIKENDNA  N DWLSKSEGSWVLPILQGFD
Sbjct: 361 NPIYIVRRKMQDLVLLGRRHTKQLESSMEIKENDNATENGDWLSKSEGSWVLPILQGFD 419

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BLAST of CcUC10G201760.1 vs. NCBI nr
Match: XP_008443210.1 (PREDICTED: protein ROOT PRIMORDIUM DEFECTIVE 1 [Cucumis melo] >XP_008443211.1 PREDICTED: protein ROOT PRIMORDIUM DEFECTIVE 1 [Cucumis melo] >XP_008443212.1 PREDICTED: protein ROOT PRIMORDIUM DEFECTIVE 1 [Cucumis melo] >XP_008443213.1 PREDICTED: protein ROOT PRIMORDIUM DEFECTIVE 1 [Cucumis melo])

HSP 1 Score: 771.5 bits (1991), Expect = 3.6e-219
Identity = 379/419 (90.45%), Postives = 397/419 (94.75%), Query Frame = 0


Query: 1   MRYEISFESALSLSKSTFSRIPFGPFNHFCQRRWRKPVENAQTRLEDRTRDLKLDKLATQ 60
           MRYEI FES   LSK TFSRIPFGPFNHFCQ+RWRKPV +AQTRLE RTRDLKLDKLATQ
Sbjct: 1   MRYEIFFESPFFLSKPTFSRIPFGPFNHFCQKRWRKPVVSAQTRLEGRTRDLKLDKLATQ 60

Query: 61  LRKFRIILKLHELMIDRKRGPFVSLQIMSRWRNIVGLKIGIGEFVHKYPHVFDVFPHPVR 120
           L+KFR+ILKLHELM +RKRGPFVSLQIMSRWRNIVG++IGIGEF+HKYPHVFDVFPHPVR
Sbjct: 61  LQKFRVILKLHELMTNRKRGPFVSLQIMSRWRNIVGVRIGIGEFLHKYPHVFDVFPHPVR 120

Query: 121 RNLCCRITGKMAALMKQEENVINDLEIETVQRLKKLLMMSVNGALHVHALRLISKELGLP 180
           RNLCCRITGKM ALMKQEENVIND+EIETVQRLKKLLMMSVNG LHVHALRLIS+ELGLP
Sbjct: 121 RNLCCRITGKMTALMKQEENVINDMEIETVQRLKKLLMMSVNGTLHVHALRLISRELGLP 180

Query: 181 DGFRESILEKYSDDFRLVDLEIVELVEKHENGVVAEVEQWREREFREKWLSEFDVKYAFP 240
           DGFRESILEKYSDDFRLVDLEIVELVEKHE+G VAEVE+WREREFREKWLSEFDVKYAFP
Sbjct: 181 DGFRESILEKYSDDFRLVDLEIVELVEKHEDGAVAEVEKWREREFREKWLSEFDVKYAFP 240

Query: 241 INFPTGFRIEGGFREKMRNWQRLPYVKPYEKRQGFGFRPSGAMQRHEKRAVAVLHELLSL 300
           INFPTGF IEGGFREK+RNWQRLPY +PYEKRQ FG R SG +QRHEKRAVAVLHELLSL
Sbjct: 241 INFPTGFIIEGGFREKLRNWQRLPYTQPYEKRQRFGHRSSGGVQRHEKRAVAVLHELLSL 300

Query: 301 TVEKLVDVERLAHFRRDFAIEVNIRELLLKHPGIFYISTKGNTQFVFLREAYAKGCLVDP 360
           TVEKLVDV+RL HFRRDFAIEVNIRELLLKHPG+FYISTKG TQ VFLREAYAKGCLV+P
Sbjct: 301 TVEKLVDVDRLVHFRRDFAIEVNIRELLLKHPGVFYISTKGTTQIVFLREAYAKGCLVEP 360

Query: 361 NPIYIVRRKMQDLVLLGRRHTKQLESSMEIKENDNAAYNEDWLSKSEGSWVLPILQGFD 420
           NPIYIVRRKMQDLVLLGRRHTKQLESSMEIKENDNAA N DWLSKSEGSWVLPILQGFD
Sbjct: 361 NPIYIVRRKMQDLVLLGRRHTKQLESSMEIKENDNAADNGDWLSKSEGSWVLPILQGFD 419

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BLAST of CcUC10G201760.1 vs. NCBI nr
Match: KAA0053914.1 (protein ROOT PRIMORDIUM DEFECTIVE 1 [Cucumis melo var. makuwa] >TYK25491.1 protein ROOT PRIMORDIUM DEFECTIVE 1 [Cucumis melo var. makuwa])

HSP 1 Score: 750.0 bits (1935), Expect = 1.1e-212
Identity = 367/404 (90.84%), Postives = 386/404 (95.54%), Query Frame = 0


Query: 16  STFSRIPFGPFNHFCQRRWRKPVENAQTRLEDRTRDLKLDKLATQLRKFRIILKLHELMI 75
           S+ SRIPFGPFNHFCQ+RWRKPV +AQTRLE RTRDLKLDKLATQL+KFR+ILKLHELM 
Sbjct: 27  SSSSRIPFGPFNHFCQKRWRKPVVSAQTRLEGRTRDLKLDKLATQLQKFRVILKLHELMT 86

Query: 76  DRKRGPFVSLQIMSRWRNIVGLKIGIGEFVHKYPHVFDVFPHPVRRNLCCRITGKMAALM 135
           +RKRGPFVSLQIMSRWRNIVG++IGIGEF+HKYPHVFDVFPHPVRRNLCCRITGKM ALM
Sbjct: 87  NRKRGPFVSLQIMSRWRNIVGVRIGIGEFLHKYPHVFDVFPHPVRRNLCCRITGKMTALM 146

Query: 136 KQEENVINDLEIETVQRLKKLLMMSVNGALHVHALRLISKELGLPDGFRESILEKYSDDF 195
           KQEENVIND+EIETVQRLKKLLMMSVNG LHVHALRLIS+ELGLPDGFRESILEKYSDDF
Sbjct: 147 KQEENVINDMEIETVQRLKKLLMMSVNGTLHVHALRLISRELGLPDGFRESILEKYSDDF 206

Query: 196 RLVDLEIVELVEKHENGVVAEVEQWREREFREKWLSEFDVKYAFPINFPTGFRIEGGFRE 255
           RLVDLEIVELVEKHE+G VAEVE+WREREFREKWLSEFDVKYAFPINFPTGF IEGGFRE
Sbjct: 207 RLVDLEIVELVEKHEDGAVAEVEKWREREFREKWLSEFDVKYAFPINFPTGFIIEGGFRE 266

Query: 256 KMRNWQRLPYVKPYEKRQGFGFRPSGAMQRHEKRAVAVLHELLSLTVEKLVDVERLAHFR 315
           K+RNWQRLPY +PYEKRQ FG R SG +QRHEKRAVAVLHELLSLTVEKLVDV+RL HFR
Sbjct: 267 KLRNWQRLPYTQPYEKRQRFGHRSSGGVQRHEKRAVAVLHELLSLTVEKLVDVDRLVHFR 326

Query: 316 RDFAIEVNIRELLLKHPGIFYISTKGNTQFVFLREAYAKGCLVDPNPIYIVRRKMQDLVL 375
           RDFAIEVNIRELLLKHPG+FYISTKG TQ VFLREAYAKGCLV+PNPIYIVRRKMQDLVL
Sbjct: 327 RDFAIEVNIRELLLKHPGVFYISTKGTTQIVFLREAYAKGCLVEPNPIYIVRRKMQDLVL 386

Query: 376 LGRRHTKQLESSMEIKENDNAAYNEDWLSKSEGSWVLPILQGFD 420
           LGRRHTKQLESSMEIKENDNAA N DWLSKSEGSWVLPILQGFD
Sbjct: 387 LGRRHTKQLESSMEIKENDNAADNGDWLSKSEGSWVLPILQGFD 430

[Close]

BLAST of CcUC10G201760.1 vs. NCBI nr
Match: XP_022937832.1 (protein ROOT PRIMORDIUM DEFECTIVE 1 isoform X1 [Cucurbita moschata] >XP_022937840.1 protein ROOT PRIMORDIUM DEFECTIVE 1 isoform X1 [Cucurbita moschata])

HSP 1 Score: 744.6 bits (1921), Expect = 4.7e-211
Identity = 368/413 (89.10%), Postives = 384/413 (92.98%), Query Frame = 0


Query: 7   FESALSLSKSTFSRIPFGPFNHFCQRRWRKPVENAQTRLEDRTRDLKLDKLATQLRKFRI 66
           FESA SLS + FSR+ FGPFNHFCQRRW KP   AQTRLEDRTRDLKLDKLATQ+RK RI
Sbjct: 4   FESAFSLSTTDFSRLRFGPFNHFCQRRWGKPAVTAQTRLEDRTRDLKLDKLATQIRKLRI 63

Query: 67  ILKLHELMIDRKRGPFVSLQIMSRWRNIVGLKIGIGEFVHKYPHVFDVFPHPVRRNLCCR 126
           I KL ELMIDRKRGPFVSLQIMSRWRN VGL+IGIG+FVHKYPHVFDVFPHP+RRNLCCR
Sbjct: 64  IFKLRELMIDRKRGPFVSLQIMSRWRNFVGLRIGIGDFVHKYPHVFDVFPHPLRRNLCCR 123

Query: 127 ITGKMAALMKQEENVINDLEIETVQRLKKLLMMSVNGALHVHALRLISKELGLPDGFRES 186
           ITGKMAALMKQEENVIND EIETVQRLKKLLMMSVNG LH+HALRLISKELGLPDGFRES
Sbjct: 124 ITGKMAALMKQEENVINDSEIETVQRLKKLLMMSVNGTLHIHALRLISKELGLPDGFRES 183

Query: 187 ILEKYSDDFRLVDLEIVELVEKHENGVVAEVEQWREREFREKWLSEFDVKYAFPINFPTG 246
           IL KYSDDFRLVDLEIVELV+KHEN  VAEVEQWREREFREKWLSEFDVK+AFPINFPTG
Sbjct: 184 ILVKYSDDFRLVDLEIVELVDKHENVAVAEVEQWREREFREKWLSEFDVKFAFPINFPTG 243

Query: 247 FRIEGGFREKMRNWQRLPYVKPYEKRQGFGFRPSGAMQRHEKRAVAVLHELLSLTVEKLV 306
           F+I+GGFREK+RNWQRLPY KPYEKRQGFG R  G M R EKRAVAVLHELLSLTVEKLV
Sbjct: 244 FKIKGGFREKLRNWQRLPYAKPYEKRQGFGVRSCGGMHRREKRAVAVLHELLSLTVEKLV 303

Query: 307 DVERLAHFRRDFAIEVNIRELLLKHPGIFYISTKGNTQFVFLREAYAKGCLVDPNPIYIV 366
           DVERL HFRRDFAIEVNIRELLLKHPGIFYISTKGNTQ VFLREAYAKGCLV+PNPIYIV
Sbjct: 304 DVERLVHFRRDFAIEVNIRELLLKHPGIFYISTKGNTQIVFLREAYAKGCLVEPNPIYIV 363

Query: 367 RRKMQDLVLLGRRHTKQLESSMEIKENDNAAYNEDWLSKSEGSWVLPILQGFD 420
           RRKMQDL+LLGRRHTKQLESSMEIKE+ +AA N DWLSKSEGSWVLPILQGFD
Sbjct: 364 RRKMQDLLLLGRRHTKQLESSMEIKEHISAADNGDWLSKSEGSWVLPILQGFD 416

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BLAST of CcUC10G201760.1 vs. ExPASy Swiss-Prot
Match: Q689D6 (Protein ROOT PRIMORDIUM DEFECTIVE 1 OS=Arabidopsis thaliana OX=3702 GN=RPD1 PE=1 SV=1)

HSP 1 Score: 255.0 bits (650), Expect = 1.5e-66
Identity = 143/360 (39.72%), Postives = 213/360 (59.17%), Query Frame = 0


Query: 36  KPVENAQT--RLEDRTRDLKLDKLATQLRKFRIILKLHELMIDRKRGPFVSLQIMSRWRN 95
           KP   + T  + +DR RD   D      +K R ++K H L++ +     +++ ++     
Sbjct: 32  KPFSQSTTIPKKQDRVRDHGYDNYMEVEKKIRKVVKFHSLILSQPNHT-IAISLLDTLAR 91

Query: 96  IVGL---KIGIGEFVHKYPHVFDVFPHPVRRNLCCRITGKMAALMKQEENVINDLEIETV 155
            +GL   +   G F+ K+PHVF+++ HPV+R L CR+T K    ++ E   + D   + V
Sbjct: 92  RLGLGFKQHEPGAFLLKFPHVFEIYEHPVQRILYCRLTRKALDQIRHEHEAVLDQIPDAV 151

Query: 156 QRLKKLLMMSVNGALHVHALRLISKELGLPDGFRESILEKYSDDFRLVDLE-----IVEL 215
            RL+KL+MMS  G + +  +R+   E GLP+ F  S++ K+   FRL+D E      +E+
Sbjct: 152 TRLRKLVMMSNTGRIRLEHVRIARTEFGLPEDFEYSVILKHPQFFRLIDGEETRDKYIEI 211

Query: 216 VEKHENGVVAEVEQWREREFREKWLSEFDVKYAFPINFPTGFRIEGGFREKMRNWQRLPY 275
           VEK  N  +  +E+ RE E+R K +   DV+++F +NFP GF+I   FR  +  WQRLPY
Sbjct: 212 VEKDPNLSICAIERVREIEYRTKGIDAEDVRFSFVVNFPPGFKIGKYFRIAVWKWQRLPY 271

Query: 276 VKPYEKRQGFGFRPSGAMQRHEKRAVAVLHELLSLTVEKLVDVERLAHFRRDFAIEVNIR 335
             PYE   G+  R   A  R EKR+VA +HELLSLTVEK + +ER+AHFR    +   ++
Sbjct: 272 WSPYEDISGYDLRSMEAQNRLEKRSVACIHELLSLTVEKKITLERIAHFRNVMNLPKKLK 331

Query: 336 ELLLKHPGIFYISTKGN---TQFVFLREAYAKGCLVDPNPIYIVRRKMQDLVLLGRRHTK 383
           E LL+H GIFYIST+GN      VFLRE Y +G LV+PN +Y+ RR++ +LVL+  R  K
Sbjct: 332 EFLLQHQGIFYISTRGNYGKLHTVFLREGYKRGELVEPNDVYLARRRLAELVLMSPRKAK 390

[Close]

BLAST of CcUC10G201760.1 vs. ExPASy Swiss-Prot
Match: Q65XL5 (Protein WHAT'S THIS FACTOR 1 homolog, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=Os05g0571100 PE=2 SV=1)

HSP 1 Score: 156.0 bits (393), Expect = 9.4e-37
Identity = 108/360 (30.00%), Postives = 192/360 (53.33%), Query Frame = 0


Query: 48  RTRDLKLDKLATQLRKFRIILKLHELMIDRKRGPFVSLQIMSRWRNIVGL--KIGIGEFV 107
           R +++  D +  + +K +++LKL  +++       +SL+ + R+R  +GL  K  +   +
Sbjct: 63  RRKEIPFDNVIQRDKKLKLVLKLRNILVSNP-DRVMSLRDLGRFRRDLGLTRKRRLIALL 122

Query: 108 HKYPHVFDVFPHPVRRNLCCRITGKMAALMKQEENVINDLEIETVQRLKKLLMMSVNGAL 167
            ++P VF+V    V  +L  R+T     L   E ++ N+ E   V +L+KLLMMS +  +
Sbjct: 123 KRFPGVFEVVEEGV-YSLRFRLTPAAERLYLDELHLKNESEGLAVTKLRKLLMMSQDKRI 182

Query: 168 HVHALRLISKELGLPDGFRESILEKYSDDFRLVDLEI---VELVEKHENGVVAEVEQWRE 227
            +  +  +  +LGLP  FR++I  +Y   FR+V ++    +EL        V+  E   E
Sbjct: 183 LIEKIAHLKNDLGLPPEFRDTICLRYPQYFRVVQMDRGPGLELTHWDPELAVSAAEV-AE 242

Query: 228 REFREKWLSEFDVKYAFPINF-----PTGFRIEGGFREKMRNWQRLPYVKPYEKRQGFGF 287
            E R +   E ++    P+ F     P G ++  G   ++  ++ +PY+ PY     F  
Sbjct: 243 EENRAREEQERNLIIDRPLKFNRVKLPQGLKLSRGEARRVAQFKEMPYISPY---SDFSH 302

Query: 288 RPSGAMQRHEKRAVAVLHELLSLTVEKLVDVERLAHFRRDFAIEVNIRELLLKHPGIFYI 347
             SG+ ++ EK A  V+HE+LSLT+EK   V+ L HFR +F    ++R +L++HP +FY+
Sbjct: 303 LRSGSAEK-EKHACGVVHEILSLTLEKRTLVDHLTHFREEFRFSQSLRGMLIRHPDMFYV 362

Query: 348 STKGNTQFVFLREAYAKGCLVDPNPIYIVRRKMQDLVLLGRRHTKQLESSMEIKENDNAA 398
           S KG+   VFLREAY    LV+ + + +++ KM+ LV + R   + + ++ E  +  N A
Sbjct: 363 SLKGDRDSVFLREAYKNSQLVEKSKLVLLKEKMRALVAVPRFPRRGVPATSEEADRTNGA 415

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BLAST of CcUC10G201760.1 vs. ExPASy Swiss-Prot
Match: A0MFS5 (Protein WHAT'S THIS FACTOR 1 homolog, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At4g01037 PE=3 SV=1)

HSP 1 Score: 152.9 bits (385), Expect = 8.0e-36
Identity = 107/356 (30.06%), Postives = 185/356 (51.97%), Query Frame = 0


Query: 32  RRWRKPVENAQTRLEDRTRDLKLDKLATQLRKFRIILKLHELMIDRKRGPFVSLQIMSRW 91
           R+ R  VE  +  ++ R ++L  D +  + +K +++L + ++++ +     +SL+ + ++
Sbjct: 63  RKTRVVVEPVRAAVK-RRKELTFDSVVQRDKKLKLVLNIRKILVSQP-DRMMSLRGLGKY 122

Query: 92  RNIVGLK--IGIGEFVHKYPHVFDVFPHPVRRNLCCRITGKMAALMKQEENVINDLEIET 151
           R  +GLK        + KYP VF++       +L  ++T +   L   E  + N+LE   
Sbjct: 123 RRDLGLKKRRRFIALLRKYPGVFEIVEEGA-YSLRFKMTSEAERLYLDEMRIRNELEDVL 182

Query: 152 VQRLKKLLMMSVNGALHVHALRLISKELGLPDGFRESILEKYSDDFRLVDL---EIVELV 211
           V +L+KL+MMS++  + +  +  +  +LGLP  FR++I ++Y   FR+V       +EL 
Sbjct: 183 VVKLRKLVMMSIDKRILLEKISHLKTDLGLPLEFRDTICQRYPQYFRVVPTPRGPALELT 242

Query: 212 EKHENGVVAEVE----QWREREFREKWLSEFDVKYAFPINFPTGFRIEGGFREKMRNWQR 271
                  V+  E      R RE  E+ L          +  P G  +      K+  ++ 
Sbjct: 243 HWDPELAVSAAELSEDDNRTRESEERNLIIDRPPKFNRVKLPRGLNLSKSETRKISQFRD 302

Query: 272 LPYVKPYEKRQGFGFRPSGAMQRHEKRAVAVLHELLSLTVEKLVDVERLAHFRRDFAIEV 331
           + Y+ PY   + F    SG +++ EK A  V+HELLSLT EK   V+ L HFR +F    
Sbjct: 303 MQYISPY---KDFSHLRSGTLEK-EKHACGVIHELLSLTTEKRTLVDHLTHFREEFRFSQ 362

Query: 332 NIRELLLKHPGIFYISTKGNTQFVFLREAYAKGCLVDPNPIYIVRRKMQDLVLLGR 379
            +R +L++HP +FY+S KG    VFLREAY    L+D +P+ +V+ KM+ LV + R
Sbjct: 363 QLRGMLIRHPDLFYVSLKGERDSVFLREAYRNSELIDKDPLTLVKEKMRALVSVPR 411

[Close]

BLAST of CcUC10G201760.1 vs. ExPASy Swiss-Prot
Match: B6TTV8 (Protein WHAT'S THIS FACTOR 1, chloroplastic OS=Zea mays OX=4577 GN=WTF1 PE=1 SV=1)

HSP 1 Score: 151.8 bits (382), Expect = 1.8e-35
Identity = 112/371 (30.19%), Postives = 193/371 (52.02%), Query Frame = 0


Query: 48  RTRDLKLDKLATQLRKFRIILKLHELMIDRKRGPFVSLQIMSRWRNIVGL--KIGIGEFV 107
           R ++   D +  + +K +++LKL  +++  +    +SL+ + R+R  +GL  K  +   +
Sbjct: 57  RRKEAPFDTVIQRDKKLKLVLKLRNILV-AQPDRVMSLRELGRFRRDLGLTRKRRLIALL 116

Query: 108 HKYPHVFDVFPHPVRRNLCCRITGKMAALMKQEENVINDLEIETVQRLKKLLMMSVNGAL 167
            ++P VFDV    V  +L  R+T     L   E  + N+ E   V +L+KLLMMS    +
Sbjct: 117 RRFPGVFDVVEEGV-YSLRFRLTPAAERLYLDELRLRNESEGLAVAKLRKLLMMSQEKRI 176

Query: 168 HVHALRLISKELGLPDGFRESILEKYSDDFRLVDLE---IVELVEKHENGVVAEVEQWRE 227
            +  +  +  +LGLP  FR+++  +Y   FR+V ++    +EL        V+  E   E
Sbjct: 177 LIEKVAHLKHDLGLPPEFRDTVCLRYPQYFRVVRMDRGPALELTHWDPELAVSAAE-LAE 236

Query: 228 REFREKWLSEFDVKYAFPINF-----PTGFRIEGGFREKMRNWQRLPYVKPYEKRQGFGF 287
            E R +   E ++    P+ F     P G ++  G   ++  ++ +PY+ PY     F  
Sbjct: 237 EESRAREAEERNLIIDRPLKFNRVRLPKGLKLTRGEARRIARFKEMPYISPY---ADFSH 296

Query: 288 RPSGAMQRHEKRAVAVLHELLSLTVEKLVDVERLAHFRRDFAIEVNIRELLLKHPGIFYI 347
             SG+ ++ EK A  V+HE+LSLTVEK   V+ L HFR +F    ++R ++++HP +FY+
Sbjct: 297 LRSGSDEK-EKHACGVVHEILSLTVEKRTLVDHLTHFREEFRFSQSLRGMIIRHPDMFYV 356

Query: 348 STKGNTQFVFLREAYAKGCLVDPNPIYIVRRKMQDLVLLGRRHTKQLESSMEIKENDNAA 407
           S KG+   VFLREAY    LV+ N + +++ KM+ LV + R   +    + E  E  N +
Sbjct: 357 SFKGDRDSVFLREAYKDSQLVEKNQLVLLKEKMRALVAVPRFPRRAAVGTGEEAEGMNGS 416

[Close]

BLAST of CcUC10G201760.1 vs. ExPASy Swiss-Prot
Match: Q9ZUZ6 (Protein WHAT'S THIS FACTOR 9, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=WTF9 PE=4 SV=1)

HSP 1 Score: 109.4 bits (272), Expect = 1.0e-22
Identity = 86/290 (29.66%), Postives = 137/290 (47.24%), Query Frame = 0


Query: 101 IGEFVHKYPHVFDVFPHPVRRNLCCRITGKMAALMKQEENVINDLEIETVQRLKKLLMMS 160
           I  F+ K+P +F+ F  P       R+T +   L +QE  V      +   RLKKL++MS
Sbjct: 85  IAHFLRKFPSIFEEFVGPEYNLPWFRLTPEATELDRQERVVYQTSADDLRDRLKKLILMS 144

Query: 161 VNGALHVHALRLISKELGLPDGFRESILEKYSDDFRLVDLE--IVELVEKHENG-VVAEV 220
            +  L +  ++ +   LGLPD + +         FR VD+E  +  L   +  G  V  V
Sbjct: 145 KDNVLPLSIVQGMKWYLGLPDDYLQFPDMNLDSSFRFVDMEDGVKGLAVDYNGGDKVLSV 204

Query: 221 EQWREREFREKWLSEFDVKYAFPINFPTGFRIEGGFREKMRNWQRLPYVKPYEKRQGFGF 280
            Q    + R   +S  +++  FP+    G R+     + +  +Q+LPYV PY+       
Sbjct: 205 LQKNAMKKRRGEVSLEEIE--FPLFPSKGCRLRVKIEDWLMEFQKLPYVSPYDDYSCLD- 264

Query: 281 RPSGAMQRHEKRAVAVLHELLSLTVEKLVDVERLAHFRRDFAIEVNIRELLLKHPGIFYI 340
            PS  +   EKR V  LHELL L VE   + ++L   ++ F +   + +   +HP IFY+
Sbjct: 265 -PSSDIA--EKRVVGFLHELLCLFVEHSAERKKLLCLKKHFGLPQKVHKAFERHPQIFYL 324

Query: 341 STKGNTQFVFLREAYAKGCLVDPNPIYIVRRKM------QDLVLLGRRHT 382
           S K  T    LRE Y     V+ +P+  VR+K        +L+L  RR++
Sbjct: 325 SMKNKTCTAILREPYRDKASVETHPVLGVRKKYIQLMKNSELILKSRRNS 368

[Close]

BLAST of CcUC10G201760.1 vs. ExPASy TrEMBL
Match: A0A0A0LFE1 (PORR domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G816690 PE=4 SV=1)

HSP 1 Score: 772.7 bits (1994), Expect = 7.8e-220
Identity = 377/419 (89.98%), Postives = 398/419 (94.99%), Query Frame = 0


Query: 1   MRYEISFESALSLSKSTFSRIPFGPFNHFCQRRWRKPVENAQTRLEDRTRDLKLDKLATQ 60
           MRY I FES + LSK TFSRIPFGPFNHFCQ+RWRKP+ NAQTRLEDRTRDLKLDKLATQ
Sbjct: 1   MRYAILFESPIFLSKPTFSRIPFGPFNHFCQKRWRKPIVNAQTRLEDRTRDLKLDKLATQ 60

Query: 61  LRKFRIILKLHELMIDRKRGPFVSLQIMSRWRNIVGLKIGIGEFVHKYPHVFDVFPHPVR 120
           L+KFR+ILKL+ELM +RKRGPFVSLQIMSRWRNIVG++IGIGEF+HKYPH+FD+FPHPVR
Sbjct: 61  LKKFRVILKLYELMNNRKRGPFVSLQIMSRWRNIVGVRIGIGEFLHKYPHLFDLFPHPVR 120

Query: 121 RNLCCRITGKMAALMKQEENVINDLEIETVQRLKKLLMMSVNGALHVHALRLISKELGLP 180
           RNLCCRITGKM ALMKQEENVIND+EIETVQRLKKLLMMSVNG LHVHALRLIS+ELGLP
Sbjct: 121 RNLCCRITGKMTALMKQEENVINDMEIETVQRLKKLLMMSVNGTLHVHALRLISRELGLP 180

Query: 181 DGFRESILEKYSDDFRLVDLEIVELVEKHENGVVAEVEQWREREFREKWLSEFDVKYAFP 240
           DGFRESILEKYSDDFRLVDLEIVELVEKH+NG +AEVE+WREREFREKWLSEFDVKYAFP
Sbjct: 181 DGFRESILEKYSDDFRLVDLEIVELVEKHKNGAIAEVEKWREREFREKWLSEFDVKYAFP 240

Query: 241 INFPTGFRIEGGFREKMRNWQRLPYVKPYEKRQGFGFRPSGAMQRHEKRAVAVLHELLSL 300
           INFPTGF IEGGFREK+RNWQRLPY +PYEKRQGFG R SG +QRHEKRAVAVLHELLSL
Sbjct: 241 INFPTGFIIEGGFREKLRNWQRLPYTQPYEKRQGFGHRSSGGVQRHEKRAVAVLHELLSL 300

Query: 301 TVEKLVDVERLAHFRRDFAIEVNIRELLLKHPGIFYISTKGNTQFVFLREAYAKGCLVDP 360
           TVEKLVDVERL HFRRDFAIEVNIRELLLKHPGIFYISTKG TQ VFLREAYAKGCLV+P
Sbjct: 301 TVEKLVDVERLVHFRRDFAIEVNIRELLLKHPGIFYISTKGTTQIVFLREAYAKGCLVEP 360

Query: 361 NPIYIVRRKMQDLVLLGRRHTKQLESSMEIKENDNAAYNEDWLSKSEGSWVLPILQGFD 420
           NPIYIVRRKMQDLVLLGRRHTKQLESSMEIKENDNA  N DWLSKSEGSWVLPILQGFD
Sbjct: 361 NPIYIVRRKMQDLVLLGRRHTKQLESSMEIKENDNATENGDWLSKSEGSWVLPILQGFD 419

[Close]

BLAST of CcUC10G201760.1 vs. ExPASy TrEMBL
Match: A0A1S3B7J9 (protein ROOT PRIMORDIUM DEFECTIVE 1 OS=Cucumis melo OX=3656 GN=LOC103486860 PE=4 SV=1)

HSP 1 Score: 771.5 bits (1991), Expect = 1.7e-219
Identity = 379/419 (90.45%), Postives = 397/419 (94.75%), Query Frame = 0


Query: 1   MRYEISFESALSLSKSTFSRIPFGPFNHFCQRRWRKPVENAQTRLEDRTRDLKLDKLATQ 60
           MRYEI FES   LSK TFSRIPFGPFNHFCQ+RWRKPV +AQTRLE RTRDLKLDKLATQ
Sbjct: 1   MRYEIFFESPFFLSKPTFSRIPFGPFNHFCQKRWRKPVVSAQTRLEGRTRDLKLDKLATQ 60

Query: 61  LRKFRIILKLHELMIDRKRGPFVSLQIMSRWRNIVGLKIGIGEFVHKYPHVFDVFPHPVR 120
           L+KFR+ILKLHELM +RKRGPFVSLQIMSRWRNIVG++IGIGEF+HKYPHVFDVFPHPVR
Sbjct: 61  LQKFRVILKLHELMTNRKRGPFVSLQIMSRWRNIVGVRIGIGEFLHKYPHVFDVFPHPVR 120

Query: 121 RNLCCRITGKMAALMKQEENVINDLEIETVQRLKKLLMMSVNGALHVHALRLISKELGLP 180
           RNLCCRITGKM ALMKQEENVIND+EIETVQRLKKLLMMSVNG LHVHALRLIS+ELGLP
Sbjct: 121 RNLCCRITGKMTALMKQEENVINDMEIETVQRLKKLLMMSVNGTLHVHALRLISRELGLP 180

Query: 181 DGFRESILEKYSDDFRLVDLEIVELVEKHENGVVAEVEQWREREFREKWLSEFDVKYAFP 240
           DGFRESILEKYSDDFRLVDLEIVELVEKHE+G VAEVE+WREREFREKWLSEFDVKYAFP
Sbjct: 181 DGFRESILEKYSDDFRLVDLEIVELVEKHEDGAVAEVEKWREREFREKWLSEFDVKYAFP 240

Query: 241 INFPTGFRIEGGFREKMRNWQRLPYVKPYEKRQGFGFRPSGAMQRHEKRAVAVLHELLSL 300
           INFPTGF IEGGFREK+RNWQRLPY +PYEKRQ FG R SG +QRHEKRAVAVLHELLSL
Sbjct: 241 INFPTGFIIEGGFREKLRNWQRLPYTQPYEKRQRFGHRSSGGVQRHEKRAVAVLHELLSL 300

Query: 301 TVEKLVDVERLAHFRRDFAIEVNIRELLLKHPGIFYISTKGNTQFVFLREAYAKGCLVDP 360
           TVEKLVDV+RL HFRRDFAIEVNIRELLLKHPG+FYISTKG TQ VFLREAYAKGCLV+P
Sbjct: 301 TVEKLVDVDRLVHFRRDFAIEVNIRELLLKHPGVFYISTKGTTQIVFLREAYAKGCLVEP 360

Query: 361 NPIYIVRRKMQDLVLLGRRHTKQLESSMEIKENDNAAYNEDWLSKSEGSWVLPILQGFD 420
           NPIYIVRRKMQDLVLLGRRHTKQLESSMEIKENDNAA N DWLSKSEGSWVLPILQGFD
Sbjct: 361 NPIYIVRRKMQDLVLLGRRHTKQLESSMEIKENDNAADNGDWLSKSEGSWVLPILQGFD 419

[Close]

BLAST of CcUC10G201760.1 vs. ExPASy TrEMBL
Match: A0A5A7UFE6 (Protein ROOT PRIMORDIUM DEFECTIVE 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G006380 PE=4 SV=1)

HSP 1 Score: 750.0 bits (1935), Expect = 5.4e-213
Identity = 367/404 (90.84%), Postives = 386/404 (95.54%), Query Frame = 0


Query: 16  STFSRIPFGPFNHFCQRRWRKPVENAQTRLEDRTRDLKLDKLATQLRKFRIILKLHELMI 75
           S+ SRIPFGPFNHFCQ+RWRKPV +AQTRLE RTRDLKLDKLATQL+KFR+ILKLHELM 
Sbjct: 27  SSSSRIPFGPFNHFCQKRWRKPVVSAQTRLEGRTRDLKLDKLATQLQKFRVILKLHELMT 86

Query: 76  DRKRGPFVSLQIMSRWRNIVGLKIGIGEFVHKYPHVFDVFPHPVRRNLCCRITGKMAALM 135
           +RKRGPFVSLQIMSRWRNIVG++IGIGEF+HKYPHVFDVFPHPVRRNLCCRITGKM ALM
Sbjct: 87  NRKRGPFVSLQIMSRWRNIVGVRIGIGEFLHKYPHVFDVFPHPVRRNLCCRITGKMTALM 146

Query: 136 KQEENVINDLEIETVQRLKKLLMMSVNGALHVHALRLISKELGLPDGFRESILEKYSDDF 195
           KQEENVIND+EIETVQRLKKLLMMSVNG LHVHALRLIS+ELGLPDGFRESILEKYSDDF
Sbjct: 147 KQEENVINDMEIETVQRLKKLLMMSVNGTLHVHALRLISRELGLPDGFRESILEKYSDDF 206

Query: 196 RLVDLEIVELVEKHENGVVAEVEQWREREFREKWLSEFDVKYAFPINFPTGFRIEGGFRE 255
           RLVDLEIVELVEKHE+G VAEVE+WREREFREKWLSEFDVKYAFPINFPTGF IEGGFRE
Sbjct: 207 RLVDLEIVELVEKHEDGAVAEVEKWREREFREKWLSEFDVKYAFPINFPTGFIIEGGFRE 266

Query: 256 KMRNWQRLPYVKPYEKRQGFGFRPSGAMQRHEKRAVAVLHELLSLTVEKLVDVERLAHFR 315
           K+RNWQRLPY +PYEKRQ FG R SG +QRHEKRAVAVLHELLSLTVEKLVDV+RL HFR
Sbjct: 267 KLRNWQRLPYTQPYEKRQRFGHRSSGGVQRHEKRAVAVLHELLSLTVEKLVDVDRLVHFR 326

Query: 316 RDFAIEVNIRELLLKHPGIFYISTKGNTQFVFLREAYAKGCLVDPNPIYIVRRKMQDLVL 375
           RDFAIEVNIRELLLKHPG+FYISTKG TQ VFLREAYAKGCLV+PNPIYIVRRKMQDLVL
Sbjct: 327 RDFAIEVNIRELLLKHPGVFYISTKGTTQIVFLREAYAKGCLVEPNPIYIVRRKMQDLVL 386

Query: 376 LGRRHTKQLESSMEIKENDNAAYNEDWLSKSEGSWVLPILQGFD 420
           LGRRHTKQLESSMEIKENDNAA N DWLSKSEGSWVLPILQGFD
Sbjct: 387 LGRRHTKQLESSMEIKENDNAADNGDWLSKSEGSWVLPILQGFD 430

[Close]

BLAST of CcUC10G201760.1 vs. ExPASy TrEMBL
Match: A0A6J1FCB5 (protein ROOT PRIMORDIUM DEFECTIVE 1 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111444101 PE=4 SV=1)

HSP 1 Score: 744.6 bits (1921), Expect = 2.3e-211
Identity = 368/413 (89.10%), Postives = 384/413 (92.98%), Query Frame = 0


Query: 7   FESALSLSKSTFSRIPFGPFNHFCQRRWRKPVENAQTRLEDRTRDLKLDKLATQLRKFRI 66
           FESA SLS + FSR+ FGPFNHFCQRRW KP   AQTRLEDRTRDLKLDKLATQ+RK RI
Sbjct: 4   FESAFSLSTTDFSRLRFGPFNHFCQRRWGKPAVTAQTRLEDRTRDLKLDKLATQIRKLRI 63

Query: 67  ILKLHELMIDRKRGPFVSLQIMSRWRNIVGLKIGIGEFVHKYPHVFDVFPHPVRRNLCCR 126
           I KL ELMIDRKRGPFVSLQIMSRWRN VGL+IGIG+FVHKYPHVFDVFPHP+RRNLCCR
Sbjct: 64  IFKLRELMIDRKRGPFVSLQIMSRWRNFVGLRIGIGDFVHKYPHVFDVFPHPLRRNLCCR 123

Query: 127 ITGKMAALMKQEENVINDLEIETVQRLKKLLMMSVNGALHVHALRLISKELGLPDGFRES 186
           ITGKMAALMKQEENVIND EIETVQRLKKLLMMSVNG LH+HALRLISKELGLPDGFRES
Sbjct: 124 ITGKMAALMKQEENVINDSEIETVQRLKKLLMMSVNGTLHIHALRLISKELGLPDGFRES 183

Query: 187 ILEKYSDDFRLVDLEIVELVEKHENGVVAEVEQWREREFREKWLSEFDVKYAFPINFPTG 246
           IL KYSDDFRLVDLEIVELV+KHEN  VAEVEQWREREFREKWLSEFDVK+AFPINFPTG
Sbjct: 184 ILVKYSDDFRLVDLEIVELVDKHENVAVAEVEQWREREFREKWLSEFDVKFAFPINFPTG 243

Query: 247 FRIEGGFREKMRNWQRLPYVKPYEKRQGFGFRPSGAMQRHEKRAVAVLHELLSLTVEKLV 306
           F+I+GGFREK+RNWQRLPY KPYEKRQGFG R  G M R EKRAVAVLHELLSLTVEKLV
Sbjct: 244 FKIKGGFREKLRNWQRLPYAKPYEKRQGFGVRSCGGMHRREKRAVAVLHELLSLTVEKLV 303

Query: 307 DVERLAHFRRDFAIEVNIRELLLKHPGIFYISTKGNTQFVFLREAYAKGCLVDPNPIYIV 366
           DVERL HFRRDFAIEVNIRELLLKHPGIFYISTKGNTQ VFLREAYAKGCLV+PNPIYIV
Sbjct: 304 DVERLVHFRRDFAIEVNIRELLLKHPGIFYISTKGNTQIVFLREAYAKGCLVEPNPIYIV 363

Query: 367 RRKMQDLVLLGRRHTKQLESSMEIKENDNAAYNEDWLSKSEGSWVLPILQGFD 420
           RRKMQDL+LLGRRHTKQLESSMEIKE+ +AA N DWLSKSEGSWVLPILQGFD
Sbjct: 364 RRKMQDLLLLGRRHTKQLESSMEIKEHISAADNGDWLSKSEGSWVLPILQGFD 416

[Close]

BLAST of CcUC10G201760.1 vs. ExPASy TrEMBL
Match: A0A6J1I6W3 (protein ROOT PRIMORDIUM DEFECTIVE 1 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111470166 PE=4 SV=1)

HSP 1 Score: 735.3 bits (1897), Expect = 1.4e-208
Identity = 364/413 (88.14%), Postives = 381/413 (92.25%), Query Frame = 0


Query: 7   FESALSLSKSTFSRIPFGPFNHFCQRRWRKPVENAQTRLEDRTRDLKLDKLATQLRKFRI 66
           FESA SLS + FSR+ FGPFNHFCQRRW KP   AQTRLEDR RDLKLD LATQ+RK RI
Sbjct: 4   FESAFSLSTTDFSRLRFGPFNHFCQRRWGKPAVTAQTRLEDRIRDLKLDTLATQIRKLRI 63

Query: 67  ILKLHELMIDRKRGPFVSLQIMSRWRNIVGLKIGIGEFVHKYPHVFDVFPHPVRRNLCCR 126
           I KL ELMIDRKRGPFVSLQIMSRWRN VGL+IGIG+FVHKYPHVFDVFPHP+RRNLCCR
Sbjct: 64  IFKLRELMIDRKRGPFVSLQIMSRWRNFVGLRIGIGDFVHKYPHVFDVFPHPLRRNLCCR 123

Query: 127 ITGKMAALMKQEENVINDLEIETVQRLKKLLMMSVNGALHVHALRLISKELGLPDGFRES 186
           ITGKMAALMKQEENVIND EIETVQRLKKLLMMS NG LH+HALRLISKELGLPDGFRES
Sbjct: 124 ITGKMAALMKQEENVINDSEIETVQRLKKLLMMSANGTLHIHALRLISKELGLPDGFRES 183

Query: 187 ILEKYSDDFRLVDLEIVELVEKHENGVVAEVEQWREREFREKWLSEFDVKYAFPINFPTG 246
           IL KYSDDFRLVDLEIVELV+KHEN  VAEVEQWREREFREKWLSEFDVK+AFPINFPTG
Sbjct: 184 ILVKYSDDFRLVDLEIVELVDKHENVAVAEVEQWREREFREKWLSEFDVKFAFPINFPTG 243

Query: 247 FRIEGGFREKMRNWQRLPYVKPYEKRQGFGFRPSGAMQRHEKRAVAVLHELLSLTVEKLV 306
           ++I+GGFREK+RNWQRLPY KPYEKRQGFG R  G M RHEKRAVAVLHELLSLTVEKLV
Sbjct: 244 YKIKGGFREKLRNWQRLPYAKPYEKRQGFGVRSCGGMHRHEKRAVAVLHELLSLTVEKLV 303

Query: 307 DVERLAHFRRDFAIEVNIRELLLKHPGIFYISTKGNTQFVFLREAYAKGCLVDPNPIYIV 366
           DVERL HFRRDFAIEVNIRELLLKHPGIFYISTKGNTQ VFLREAYAKGCLV+PNPIYIV
Sbjct: 304 DVERLVHFRRDFAIEVNIRELLLKHPGIFYISTKGNTQIVFLREAYAKGCLVEPNPIYIV 363

Query: 367 RRKMQDLVLLGRRHTKQLESSMEIKENDNAAYNEDWLSKSEGSWVLPILQGFD 420
           RRKMQDL+LLGRRHTKQLESSMEIKE+ +AA N D LSKSEGSWVLPILQGFD
Sbjct: 364 RRKMQDLLLLGRRHTKQLESSMEIKEHVSAADNGDCLSKSEGSWVLPILQGFD 416

[Close]

BLAST of CcUC10G201760.1 vs. TAIR 10
Match: AT5G45790.2 (Ubiquitin carboxyl-terminal hydrolase family protein )

HSP 1 Score: 494.2 bits (1271), Expect = 1.0e-139
Identity = 245/422 (58.06%), Postives = 324/422 (76.78%), Query Frame = 0


Query: 1   MRYEISFESALSLSKSTFSRIPFGPFNHFCQRRWRKPVENAQTRLEDRTRDLKLDKLATQ 60
           +RY  S   AL+    T S     P   + QRRW KPV++AQTRLE+RTRD +LDK+  Q
Sbjct: 23  LRYS-SIREALTHQNPTKSSF-LCPLYFYNQRRWLKPVDSAQTRLENRTRDHQLDKIIPQ 82

Query: 61  LRKFRIILKLHELMIDRKRGPFVSLQIMSRWRNIVGLKIGIGEFVHKYPHVFDVFPHPVR 120
           +RK  IIL++ +LM  +KRGPFVSLQ+MSRW+N+VGL + +G F+ KYPH F++F HP  
Sbjct: 83  IRKLNIILEISKLMSSKKRGPFVSLQLMSRWKNLVGLNVNVGAFIGKYPHAFEIFTHPFS 142

Query: 121 RNLCCRITGKMAALMKQEENVINDLEIETVQRLKKLLMMSVNGALHVHALRLISKELGLP 180
           +NLCC+IT K   L+ +EENV+ + E++ V+R+KKLL++S +G L VHALRLI KELGLP
Sbjct: 143 KNLCCKITEKFKVLIDEEENVVRECEVDAVKRVKKLLLLSKHGVLRVHALRLIRKELGLP 202

Query: 181 DGFRESILEKYSDDFRLVDLEIVELVEKHENGV-VAEVEQWREREFREKWLSEFDVKYAF 240
           + FR+SIL KYS +FRLVDLE +ELV++ +  + VA+VE+WRE E+REKWLS+F+  YAF
Sbjct: 203 EDFRDSILAKYSSEFRLVDLETLELVDRDDESLCVAKVEEWREVEYREKWLSKFETNYAF 262

Query: 241 PINFPTGFRIEGGFREKMRNWQRLPYVKPYEKRQGFGFRPSGAMQRHEKRAVAVLHELLS 300
           PI+ PTGF+IE GFRE+++NWQR+PYVKPY++++      S  ++R EKR VAV+HELLS
Sbjct: 263 PIHLPTGFKIEKGFREELKNWQRVPYVKPYDRKE-----ISRGLERFEKRVVAVIHELLS 322

Query: 301 LTVEKLVDVERLAHFRRDFAIEVNIRELLLKHPGIFYISTKGNTQFVFLREAYAKGCLVD 360
           LTVEK+V+VERLAHFR+D  IEVN+RE++LKHPGIFY+STKG++Q +FLREAY+KGCL++
Sbjct: 323 LTVEKMVEVERLAHFRKDLGIEVNVREVILKHPGIFYVSTKGSSQTLFLREAYSKGCLIE 382

Query: 361 PNPIYIVRRKMQDLVLLGRRHTKQL-----ESSMEIKEND-NAAYNEDWLSKSEGSWVLP 416
           PNPIY VRRKM DLVLL  R+++ L     E+  E K  D   + NEDW    +G WVLP
Sbjct: 383 PNPIYNVRRKMLDLVLLKTRYSRMLLQREDETHREEKSRDVLISSNEDWEGGRDGDWVLP 437

[Close]

BLAST of CcUC10G201760.1 vs. TAIR 10
Match: AT5G45790.1 (Ubiquitin carboxyl-terminal hydrolase family protein )

HSP 1 Score: 421.4 bits (1082), Expect = 8.5e-118
Identity = 201/341 (58.94%), Postives = 269/341 (78.89%), Query Frame = 0


Query: 82  FVSLQIMSRWRNIVGLKIGIGEFVHKYPHVFDVFPHPVRRNLCCRITGKMAALMKQEENV 141
           F + ++MSRW+N+VGL + +G F+ KYPH F++F HP  +NLCC+IT K   L+ +EENV
Sbjct: 17  FSTNKLMSRWKNLVGLNVNVGAFIGKYPHAFEIFTHPFSKNLCCKITEKFKVLIDEEENV 76

Query: 142 INDLEIETVQRLKKLLMMSVNGALHVHALRLISKELGLPDGFRESILEKYSDDFRLVDLE 201
           + + E++ V+R+KKLL++S +G L VHALRLI KELGLP+ FR+SIL KYS +FRLVDLE
Sbjct: 77  VRECEVDAVKRVKKLLLLSKHGVLRVHALRLIRKELGLPEDFRDSILAKYSSEFRLVDLE 136

Query: 202 IVELVEKHENGV-VAEVEQWREREFREKWLSEFDVKYAFPINFPTGFRIEGGFREKMRNW 261
            +ELV++ +  + VA+VE+WRE E+REKWLS+F+  YAFPI+ PTGF+IE GFRE+++NW
Sbjct: 137 TLELVDRDDESLCVAKVEEWREVEYREKWLSKFETNYAFPIHLPTGFKIEKGFREELKNW 196

Query: 262 QRLPYVKPYEKRQGFGFRPSGAMQRHEKRAVAVLHELLSLTVEKLVDVERLAHFRRDFAI 321
           QR+PYVKPY++++      S  ++R EKR VAV+HELLSLTVEK+V+VERLAHFR+D  I
Sbjct: 197 QRVPYVKPYDRKE-----ISRGLERFEKRVVAVIHELLSLTVEKMVEVERLAHFRKDLGI 256

Query: 322 EVNIRELLLKHPGIFYISTKGNTQFVFLREAYAKGCLVDPNPIYIVRRKMQDLVLLGRRH 381
           EVN+RE++LKHPGIFY+STKG++Q +FLREAY+KGCL++PNPIY VRRKM DLVLL  R+
Sbjct: 257 EVNVREVILKHPGIFYVSTKGSSQTLFLREAYSKGCLIEPNPIYNVRRKMLDLVLLKTRY 316

Query: 382 TKQL-----ESSMEIKEND-NAAYNEDWLSKSEGSWVLPIL 416
           ++ L     E+  E K  D   + NEDW    +G WVLPIL
Sbjct: 317 SRMLLQREDETHREEKSRDVLISSNEDWEGGRDGDWVLPIL 352

[Close]

BLAST of CcUC10G201760.1 vs. TAIR 10
Match: AT4G33495.1 (Ubiquitin carboxyl-terminal hydrolase family protein )

HSP 1 Score: 255.0 bits (650), Expect = 1.1e-67
Identity = 143/360 (39.72%), Postives = 213/360 (59.17%), Query Frame = 0


Query: 36  KPVENAQT--RLEDRTRDLKLDKLATQLRKFRIILKLHELMIDRKRGPFVSLQIMSRWRN 95
           KP   + T  + +DR RD   D      +K R ++K H L++ +     +++ ++     
Sbjct: 32  KPFSQSTTIPKKQDRVRDHGYDNYMEVEKKIRKVVKFHSLILSQPNHT-IAISLLDTLAR 91

Query: 96  IVGL---KIGIGEFVHKYPHVFDVFPHPVRRNLCCRITGKMAALMKQEENVINDLEIETV 155
            +GL   +   G F+ K+PHVF+++ HPV+R L CR+T K    ++ E   + D   + V
Sbjct: 92  RLGLGFKQHEPGAFLLKFPHVFEIYEHPVQRILYCRLTRKALDQIRHEHEAVLDQIPDAV 151

Query: 156 QRLKKLLMMSVNGALHVHALRLISKELGLPDGFRESILEKYSDDFRLVDLE-----IVEL 215
            RL+KL+MMS  G + +  +R+   E GLP+ F  S++ K+   FRL+D E      +E+
Sbjct: 152 TRLRKLVMMSNTGRIRLEHVRIARTEFGLPEDFEYSVILKHPQFFRLIDGEETRDKYIEI 211

Query: 216 VEKHENGVVAEVEQWREREFREKWLSEFDVKYAFPINFPTGFRIEGGFREKMRNWQRLPY 275
           VEK  N  +  +E+ RE E+R K +   DV+++F +NFP GF+I   FR  +  WQRLPY
Sbjct: 212 VEKDPNLSICAIERVREIEYRTKGIDAEDVRFSFVVNFPPGFKIGKYFRIAVWKWQRLPY 271

Query: 276 VKPYEKRQGFGFRPSGAMQRHEKRAVAVLHELLSLTVEKLVDVERLAHFRRDFAIEVNIR 335
             PYE   G+  R   A  R EKR+VA +HELLSLTVEK + +ER+AHFR    +   ++
Sbjct: 272 WSPYEDISGYDLRSMEAQNRLEKRSVACIHELLSLTVEKKITLERIAHFRNVMNLPKKLK 331

Query: 336 ELLLKHPGIFYISTKGN---TQFVFLREAYAKGCLVDPNPIYIVRRKMQDLVLLGRRHTK 383
           E LL+H GIFYIST+GN      VFLRE Y +G LV+PN +Y+ RR++ +LVL+  R  K
Sbjct: 332 EFLLQHQGIFYISTRGNYGKLHTVFLREGYKRGELVEPNDVYLARRRLAELVLMSPRKAK 390

[Close]

BLAST of CcUC10G201760.1 vs. TAIR 10
Match: AT1G06440.1 (Ubiquitin carboxyl-terminal hydrolase family protein )

HSP 1 Score: 243.8 bits (621), Expect = 2.4e-64
Identity = 140/358 (39.11%), Postives = 211/358 (58.94%), Query Frame = 0


Query: 48  RTRDLKLDKLATQLRKFRIILKLHELMIDRKRG--PFVSLQIMSRWRNIVGLKIGIGEFV 107
           R+RD   +KL  + +    ++ + +L +       P +S++ +SR    + L  G   F+
Sbjct: 34  RSRDPVFEKLMDKYKNLLKVIAIQDLTLANPTADPPSLSIEFLSRLSQKLHLNRGAASFL 93

Query: 108 HKYPHVFDVFPHPVRRNLCCRITGKMAALMKQEENVINDLEIETVQRLKKLLMMSVNGAL 167
            KYPH+F V   PV+    CR+T     + +QE   I       V RL +LL MS++ ++
Sbjct: 94  RKYPHIFHVLYDPVKAEPFCRLTDVAMEISRQEALAITATLSLVVDRLVRLLSMSISKSI 153

Query: 168 HVHALRLISKELGLPDGFRESILEKYSDDFRLVD-----LEIVELVEKHENGV--VAEVE 227
            + A+  + +ELGLPD F +S++ K    F+L D       I+ELV++ E  +   A VE
Sbjct: 154 PLRAVFKVWRELGLPDDFEDSVISKNPHLFKLSDGHESNTHILELVQEEEKRLEFEAAVE 213

Query: 228 QWREREFREKWLS--EFDVKYAFPINFPTGFRIEGGFREKMRNWQRLPYVKPYEKRQGFG 287
           +WR  E  ++  S    +++++F  ++P G R+   F+ K++ WQRLPYV PYE   G  
Sbjct: 214 KWRVVECSKEDCSVDRTEIQFSFKHSYPPGMRLSKTFKAKVKEWQRLPYVGPYEDMVGKK 273

Query: 288 FRPSGAMQRHEKRAVAVLHELLSLTVEKLVDVERLAHFRRDFAIEVNIRELLLKHPGIFY 347
              SG M   EKRAVA+ HE L+LTVEK+V+VE+++HFR+ F I++NIR+L L HPG+FY
Sbjct: 274 KSRSGVM-GIEKRAVAIAHEFLNLTVEKMVEVEKISHFRKCFGIDLNIRDLFLDHPGMFY 333

Query: 348 ISTKGNTQFVFLREAYAKGCLVDPNPIYIVRRKMQDLVLLGRRHTKQLESSMEIKEND 395
           +STKG    VFLREAY +G L+DPNP+Y  RRK+ DLVLLGR        +  + E +
Sbjct: 334 VSTKGKRHTVFLREAYERGRLIDPNPVYDARRKLLDLVLLGRHAALSESGNTSMSEQE 390

[Close]

BLAST of CcUC10G201760.1 vs. TAIR 10
Match: AT3G58520.1 (Ubiquitin carboxyl-terminal hydrolase family protein )

HSP 1 Score: 157.1 bits (396), Expect = 3.0e-38
Identity = 104/319 (32.60%), Postives = 168/319 (52.66%), Query Frame = 0


Query: 78  KRGP--FVSLQIMSRWRNIVGLKIGIGEFVHKYPHVFDVFPHPVRRNL-CCRITGKMAAL 137
           KR P  F++ + ++ W+ ++GL + +  F+ +YP +F  FPH    +L C ++T     L
Sbjct: 62  KRSPTGFLTAKSVADWQKLLGLTVPVLRFLRRYPTLFHEFPHARYASLPCFKLTDTALML 121

Query: 138 MKQEENVINDLEIETVQRLKKLLMMSVNGALHVHALRLISKELGLPDGFRESILEKYSDD 197
             QEE +    E +TV+RL ++LMM  +  + + +L  +  +LGLPD + ++++ KY D 
Sbjct: 122 DSQEEIIHQSHEADTVERLCRVLMMMRSKTVSLRSLHSLKFDLGLPDNYEKTLVMKYPDH 181

Query: 198 FRLVD-------LEIVE---------LVEKHENGVVAEVEQWREREFREKWLSEFDVKYA 257
           F  V        L++V+         L +++E+  V+  E+ R REF+            
Sbjct: 182 FCFVKASNGNPCLKLVKWRDEFAFSALQKRNEDNDVSG-EESRYREFKRG-----QSTLT 241

Query: 258 FPINFPTGFRIEGGFREKMRNWQRLPYVKPYEKRQGFGFRPSGAMQRHEKRAVAVLHELL 317
           FP++FP G+  +   +  M  +Q+LPY+ PY+        P   +   EKRAVAVLHELL
Sbjct: 242 FPMSFPRGYGAQKKVKAWMDEFQKLPYISPYDDPSNID--PESDLM--EKRAVAVLHELL 301

Query: 318 SLTVEKLVDVERLAHFRRDFAIEVNIRELLLKHPGIFYISTKGNTQFVFLREAYAKGCLV 377
           SLT+ K      L   R +  I      L  ++PGIFY+S K  T  V L+E Y +G LV
Sbjct: 302 SLTIHKKTKRNYLRSMRAELNIPHKFTRLFTRYPGIFYLSLKCKTTTVILKEGYRRGKLV 361

The following BLAST results are available for this feature:

BLAST of CcUC10G201760.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038903898.1	6.6e-229	94.75	protein ROOT PRIMORDIUM DEFECTIVE 1 [Benincasa hispida] >XP_038903899.1 protein ...	[more]
XP_004136766.1	1.6e-219	89.98	protein ROOT PRIMORDIUM DEFECTIVE 1 [Cucumis sativus] >XP_011652162.1 protein RO...	[more]
XP_008443210.1	3.6e-219	90.45	PREDICTED: protein ROOT PRIMORDIUM DEFECTIVE 1 [Cucumis melo] >XP_008443211.1 PR...	[more]
KAA0053914.1	1.1e-212	90.84	protein ROOT PRIMORDIUM DEFECTIVE 1 [Cucumis melo var. makuwa] >TYK25491.1 prote...	[more]
XP_022937832.1	4.7e-211	89.10	protein ROOT PRIMORDIUM DEFECTIVE 1 isoform X1 [Cucurbita moschata] >XP_02293784...	[more]

BLAST of CcUC10G201760.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q689D6	1.5e-66	39.72	Protein ROOT PRIMORDIUM DEFECTIVE 1 OS=Arabidopsis thaliana OX=3702 GN=RPD1 PE=1...	[more]
Q65XL5	9.4e-37	30.00	Protein WHAT'S THIS FACTOR 1 homolog, chloroplastic OS=Oryza sativa subsp. japon...	[more]
A0MFS5	8.0e-36	30.06	Protein WHAT'S THIS FACTOR 1 homolog, chloroplastic OS=Arabidopsis thaliana OX=3...	[more]
B6TTV8	1.8e-35	30.19	Protein WHAT'S THIS FACTOR 1, chloroplastic OS=Zea mays OX=4577 GN=WTF1 PE=1 SV=...	[more]
Q9ZUZ6	1.0e-22	29.66	Protein WHAT'S THIS FACTOR 9, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=W...	[more]

BLAST of CcUC10G201760.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LFE1	7.8e-220	89.98	PORR domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G816690 PE=4 S...	[more]
A0A1S3B7J9	1.7e-219	90.45	protein ROOT PRIMORDIUM DEFECTIVE 1 OS=Cucumis melo OX=3656 GN=LOC103486860 PE=4...	[more]
A0A5A7UFE6	5.4e-213	90.84	Protein ROOT PRIMORDIUM DEFECTIVE 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5...	[more]
A0A6J1FCB5	2.3e-211	89.10	protein ROOT PRIMORDIUM DEFECTIVE 1 isoform X1 OS=Cucurbita moschata OX=3662 GN=...	[more]
A0A6J1I6W3	1.4e-208	88.14	protein ROOT PRIMORDIUM DEFECTIVE 1 isoform X1 OS=Cucurbita maxima OX=3661 GN=LO...	[more]

BLAST of CcUC10G201760.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G45790.2	1.0e-139	58.06	Ubiquitin carboxyl-terminal hydrolase family protein	[more]
AT5G45790.1	8.5e-118	58.94	Ubiquitin carboxyl-terminal hydrolase family protein	[more]
AT4G33495.1	1.1e-67	39.72	Ubiquitin carboxyl-terminal hydrolase family protein	[more]
AT1G06440.1	2.4e-64	39.11	Ubiquitin carboxyl-terminal hydrolase family protein	[more]
AT3G58520.1	3.0e-38	32.60	Ubiquitin carboxyl-terminal hydrolase family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 381..401
None	No IPR available	PANTHER	PTHR31476:SF12	UBIQUITIN CARBOXYL-TERMINAL HYDROLASE FAMILY PROTEIN	coord: 15..418
IPR021099	Plant organelle RNA recognition domain	PFAM	PF11955	PORR	coord: 50..378 e-value: 4.5E-108 score: 361.1
IPR045040	PORR family	PANTHER	PTHR31476	PROTEIN WHAT'S THIS FACTOR 1 HOMOLOG, CHLOROPLASTIC	coord: 15..418

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
CcUC10G201760	CcUC10G201760	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CcUC10G201760.1-exon	CcUC10G201760.1-exon-CicolChr10:28971750..28973009	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CcUC10G201760.1-cds	CcUC10G201760.1-cds-CicolChr10:28971750..28973009	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
CcUC10G201760.1	CcUC10G201760.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0003723	RNA binding
molecular_function	GO:0016787	hydrolase activity