CcUC10G187420 (gene) Watermelon (PI 537277) v1

Overview


Name	CcUC10G187420
Type	gene
Organism	Citrullus colocynthis (Watermelon (PI 537277) v1)
Description	Nucleolar protein 12
Location	CicolChr10: 1443025 .. 1446878 (-)
RNA-Seq Expression	CcUC10G187420
Synteny	CcUC10G187420

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CCCAGACCTAAAATTTGGAGACATTTTTTTGGAGAAAACAAAAACAAAATCTGCACGTAACCTTAAACAAAAGGAAGAAACCCGTTGGGAATCCGACACGGGATAGCCCTAGGGTTTCAAATTTCATCTTCTTCATCCATTCGCCTCAATTACATTCGACCTTTACATTCGCAGCAAATTCCTGAAGAACAATAATGGGGAAGAAGAAAACCACCGACCCCATAAATGACCCCGACGAAAGCGCAACTGTCTCTGCTCCGTTCAGCGTTTTCGAGACTTTGTTCGGCAGGGCCGGAGTAGAAAACCCCGGCGTTTCTATCTTCTCCAATGACAATCCTTTTCGTAGGAAAGATTCAGATTCCATTCCTGCACCTGCTGAAAAATCTCCTAATACTTGCTCTGATGGAAAGGGTAGGAAGAAGGGCAAGGAGAAAAGGGTTGGTACTGATTTGGATTCTGCTGAGGAAGCTGTTAAAAGTTCGTCGGAGATTAAGAAATTCAAGAGGAAGGAGAAGACTCGTGACCCTGAATTGGATAATGTAGATGATGATGGGGAAAGGGGTTCCGAATCGCAAGGCGTATTGAAGAAGAATAAGAAGAAAGGTACTGTTTTGGGTTCTGAAACTACAGAAAGGAGTCCTGAATTTGACGGAGAATTGAAGATAGATGAGCAAAGGACTGATAGTAAACTCGGAGAGAATGTGAAATTTATGAAAGATAGGAAGAAGAGGAAGAGAGATGAACTTGAGAGAGAGTATGAAGCGAAAAAGTATGGTGTAGCAGAAGTAGCTGAAGATGAAGGGGAAGGTTCAGGGGGGAATGTTGTTGGGAAGAAGAGGAAAGCATTGGACGATCCTTCAGAGATGATGGTTACGAAGGAGGGATTTGATGACGAAAGCAAGCTTTTGAGAACTGTGTTTGTTGGGAACTTGCCATTGAAAGTTAAGAAGAAAGCTCTAGCCAAGGAGTTTAGCCAATTTGGAGAGATAGAATCTGTTAGGATCCGGTCTGTACCAATTGACATTGCCAATGTAAGCTTCGCTTTTTATTTGTTAATTATCTTGAATTTATCAATCTCCAACCTTACAAATTTTGTATTCTTTCTCTAATCAGAGCAAAAAACCGAGGAAGGGGGCAATCCTTTCTAAGAAACTCAATGAAGCTGCGGACAGGTAATGTTTCTATATCATAATGTTGTTTAACCTTTTGACTGTTTGTTCTGCAACTGAATTCGATCAATGTTGTTTGATTGTTTCTATCTTAAATACATGTTCTTCAATTAATACCAAAATTAGAGAGCGAGTTAGAGAGAGAGAGATCTTGGTTTTAGGATGATCAGGCTTAGTTCAATGTGGTCTTTTGCTACCTTGAGTTCTAAAGAGACCTTGATTTTAGGAAATGTTTGTAGGAAATAATACCTGGATATGGTTGCTTTATTCTTTAGCAAAACAAATCTTTATACATTCTTATTGATGACAATGAACTATCTGCAGTTCTCATGCATACGTTGTTTTTAAAACGGAGGAATCAGCACAGGCCTCTTTGTCGCATAACATGGCTGTGGTATGATTTACTCTTTTCTTTTCTTGTTAGCTTTATGAAGTTGAAACTTTTGTGCTTTGACTATTTCCATTTTTGATGATTGATTACTTTGTATTGTGAATTTAGTTTGCCGGAAATCATATACGGGTTGATAGAGCATGTCCACCACATAAAAAGTTGAAAGTAGGAAATGGGCCAATCTATGATCCCAAGAGAACTGTTTTTGTGGGTAACCTTCCATTTGATGTAAAGGTAACCTTTTATCTCTCACCCAAGTTTTCTTCCCTCTTTCCTTGCGTTTAAGTTATATTCTGTAGAGTTGATTTATGGTTTTACACATTTACATGTTTTCAGGATGAAGAATTGTACCAATTATTTTGTGGAATCGGCAATATGGGATCCAATGTTGAGGCTATTCGGGTCATTAGAGATCCCAAGGTGAATGTGGGGAAGGGCTTTGCGTATGTCTTCTTTAAAACAAGGGTATGATCAGATTTTTCAACATTAACATTCATTCATTTATATAGTATGTCTTCTTTAAAACAAGGGTATGATCAGATTTTTCAACATTAACATTCATTCATTTATATAAATAATCTTCGTTATCAGTTGATCATGTCACTAGTTTCATAGTTTTGAACAAAGATCTTTAGCTTATTGGTGACCAGGTCATTAGTTGATGAGGTTGACAAGTCCATTGTTTTGGTTGAGAAACTTTGATGGTGTTTTAATTAATTAGTCCTTTTCTCTCTATAATCGGATTATTACAAGTCCTGCCCTTTGCATTATGCTCATGGCGATCTCCACTAAGCATGGGGAGGCCTTATCATCTACTCTTAGGCCAGTCTTTGCATTATGTTCATGAATCATTCTTGACCAACTTGCACTAGTATTAGGGAGGCTTCATCTGCGCAAGTCAGAGACAAGTCAACAAGGACTTTGAGTTATTAAGGTTCCGTTCGGTAACTATTTGATTTTTAGTTTTTAGTTTTTGAAAATTAAGTCTATAACCACTCCGTCCACCTCAAATTCTTGCTCTTTTATCTACTTTTTACCAATATTTTAAAAAACTAAGCTAAATTTTGAAAACTAAAAAAAAAGTAGTTTTGAAAAAGGAATTTTTATTTTTGGAATTTGGCTAAGAATACAACTCATTTACTTAAGAAAGATGAAACTATAGGAAGAAATTGAGAGTAAATATACTTAATTTTCAAAAACTGACAACAAAATACCAAATGGTTATCAAACGGAGTCTGAGTTTTCCAGGGTCTGAGTTGAGTTGACCAAGTGTGTATCTCTAAACATTCCAAGCGTTGTTACCTAGCCACTAGGGAATTAATTAGTTATATATAGGCTGAGAGCATATTGAGAATTTTCAGATAGTCTATGGAGATACAAATTCTTTTTTCCTTGCAGGAGTAAATTGGCTTCCAAAAGCTAGAAATGTATTAACTTCTTATTCTTTCTCTATCTTCCCTGATTACCTCTATTCTTAAAAGACATATGCATGCTTTACCATTAGTTTACATCATTTATCTTGCAATGTCATGCTATCATGGGTTGCTTATATTTCCTGGATGTGCAGGAAGCAGCAAACTCTGTAGTTGATAATCAAAAACTAGAGTTGCATGGTCGAAAACTGAGGCTCTTTCATGCCAAACGAAATCTGGCATCAACTCCGCTTAAGAAACGAAATAGGCCACATACGGAAGCTGATCGGACCCCAGTAAAGAAAAATGCAGGGGATTCAGGTTTAGGGACACCAGACAGCAGCAAGGGGGTAACGCCAAAAGCGGCTGTTGCATCCTATCAGGGCCTGCGTGCGAGCAAAAGCGGTTCCCAGAAGAAGATCCATACCAAAGGCAGTAGCACGAAATGGCTGAAATCACATTCAAACAGTAAAGAGAAGCCAATAGATCACAAGAGGAAAAGACCAGAGAAGACAAGTGAAAGAAAAGCGAAAAGACCAGCAGTTGCCAACAGAAAGGCAGCAGTGAAAGCGACGAAAAAAGGCATTGCAGCCCCAAAACAGGCCGGGGTGAAGCGCAAGTCCGATAGCCGAACTCCAGGGAGCTCTCACAGAAACAAGAGAGTCAAAAGGTTTAGATAGATAGGAAACACTGGAGAATACAAAGTTCATGTTGTGGACTGAACTGAATTCTTTAAAACCTTCTCTGTATTATGTTACGTGGCTTATTAACTTACTTTTCGTTCAAGGAAAAGTTAACACTAATCAACTTTTTTCATGCTGTTCTTGTGTCTAATCGACTTGTCACTAAGTAGGCGTTGTTAACTATTTGGTTTTTTTGGCT

mRNA sequence

CCCAGACCTAAAATTTGGAGACATTTTTTTGGAGAAAACAAAAACAAAATCTGCACGTAACCTTAAACAAAAGGAAGAAACCCGTTGGGAATCCGACACGGGATAGCCCTAGGGTTTCAAATTTCATCTTCTTCATCCATTCGCCTCAATTACATTCGACCTTTACATTCGCAGCAAATTCCTGAAGAACAATAATGGGGAAGAAGAAAACCACCGACCCCATAAATGACCCCGACGAAAGCGCAACTGTCTCTGCTCCGTTCAGCGTTTTCGAGACTTTGTTCGGCAGGGCCGGAGTAGAAAACCCCGGCGTTTCTATCTTCTCCAATGACAATCCTTTTCGTAGGAAAGATTCAGATTCCATTCCTGCACCTGCTGAAAAATCTCCTAATACTTGCTCTGATGGAAAGGGTAGGAAGAAGGGCAAGGAGAAAAGGGTTGGTACTGATTTGGATTCTGCTGAGGAAGCTGTTAAAAGTTCGTCGGAGATTAAGAAATTCAAGAGGAAGGAGAAGACTCGTGACCCTGAATTGGATAATGTAGATGATGATGGGGAAAGGGGTTCCGAATCGCAAGGCGTATTGAAGAAGAATAAGAAGAAAGGTACTGTTTTGGGTTCTGAAACTACAGAAAGGAGTCCTGAATTTGACGGAGAATTGAAGATAGATGAGCAAAGGACTGATAGTAAACTCGGAGAGAATGTGAAATTTATGAAAGATAGGAAGAAGAGGAAGAGAGATGAACTTGAGAGAGAGTATGAAGCGAAAAAGTATGGTGTAGCAGAAGTAGCTGAAGATGAAGGGGAAGGTTCAGGGGGGAATGTTGTTGGGAAGAAGAGGAAAGCATTGGACGATCCTTCAGAGATGATGGTTACGAAGGAGGGATTTGATGACGAAAGCAAGCTTTTGAGAACTGTGTTTGTTGGGAACTTGCCATTGAAAGTTAAGAAGAAAGCTCTAGCCAAGGAGTTTAGCCAATTTGGAGAGATAGAATCTGTTAGGATCCGGTCTGTACCAATTGACATTGCCAATAGCAAAAAACCGAGGAAGGGGGCAATCCTTTCTAAGAAACTCAATGAAGCTGCGGACAGTTCTCATGCATACGTTGTTTTTAAAACGGAGGAATCAGCACAGGCCTCTTTGTCGCATAACATGGCTGTGTTTGCCGGAAATCATATACGGGTTGATAGAGCATGTCCACCACATAAAAAGTTGAAAGTAGGAAATGGGCCAATCTATGATCCCAAGAGAACTGTTTTTGTGGGTAACCTTCCATTTGATGTAAAGGATGAAGAATTGTACCAATTATTTTGTGGAATCGGCAATATGGGATCCAATGTTGAGGCTATTCGGGTCATTAGAGATCCCAAGGTGAATGTGGGGAAGGGCTTTGCGTATGTCTTCTTTAAAACAAGGGAAGCAGCAAACTCTGTAGTTGATAATCAAAAACTAGAGTTGCATGGTCGAAAACTGAGGCTCTTTCATGCCAAACGAAATCTGGCATCAACTCCGCTTAAGAAACGAAATAGGCCACATACGGAAGCTGATCGGACCCCAGTAAAGAAAAATGCAGGGGATTCAGGTTTAGGGACACCAGACAGCAGCAAGGGGGTAACGCCAAAAGCGGCTGTTGCATCCTATCAGGGCCTGCGTGCGAGCAAAAGCGGTTCCCAGAAGAAGATCCATACCAAAGGCAGTAGCACGAAATGGCTGAAATCACATTCAAACAGTAAAGAGAAGCCAATAGATCACAAGAGGAAAAGACCAGAGAAGACAAGTGAAAGAAAAGCGAAAAGACCAGCAGTTGCCAACAGAAAGGCAGCAGTGAAAGCGACGAAAAAAGGCATTGCAGCCCCAAAACAGGCCGGGGTGAAGCGCAAGTCCGATAGCCGAACTCCAGGGAGCTCTCACAGAAACAAGAGAGTCAAAAGGTTTAGATAGATAGGAAACACTGGAGAATACAAAGTTCATGTTGTGGACTGAACTGAATTCTTTAAAACCTTCTCTGTATTATGTTACGTGGCTTATTAACTTACTTTTCGTTCAAGGAAAAGTTAACACTAATCAACTTTTTTCATGCTGTTCTTGTGTCTAATCGACTTGTCACTAAGTAGGCGTTGTTAACTATTTGGTTTTTTTGGCT

Coding sequence (CDS)

ATGGGGAAGAAGAAAACCACCGACCCCATAAATGACCCCGACGAAAGCGCAACTGTCTCTGCTCCGTTCAGCGTTTTCGAGACTTTGTTCGGCAGGGCCGGAGTAGAAAACCCCGGCGTTTCTATCTTCTCCAATGACAATCCTTTTCGTAGGAAAGATTCAGATTCCATTCCTGCACCTGCTGAAAAATCTCCTAATACTTGCTCTGATGGAAAGGGTAGGAAGAAGGGCAAGGAGAAAAGGGTTGGTACTGATTTGGATTCTGCTGAGGAAGCTGTTAAAAGTTCGTCGGAGATTAAGAAATTCAAGAGGAAGGAGAAGACTCGTGACCCTGAATTGGATAATGTAGATGATGATGGGGAAAGGGGTTCCGAATCGCAAGGCGTATTGAAGAAGAATAAGAAGAAAGGTACTGTTTTGGGTTCTGAAACTACAGAAAGGAGTCCTGAATTTGACGGAGAATTGAAGATAGATGAGCAAAGGACTGATAGTAAACTCGGAGAGAATGTGAAATTTATGAAAGATAGGAAGAAGAGGAAGAGAGATGAACTTGAGAGAGAGTATGAAGCGAAAAAGTATGGTGTAGCAGAAGTAGCTGAAGATGAAGGGGAAGGTTCAGGGGGGAATGTTGTTGGGAAGAAGAGGAAAGCATTGGACGATCCTTCAGAGATGATGGTTACGAAGGAGGGATTTGATGACGAAAGCAAGCTTTTGAGAACTGTGTTTGTTGGGAACTTGCCATTGAAAGTTAAGAAGAAAGCTCTAGCCAAGGAGTTTAGCCAATTTGGAGAGATAGAATCTGTTAGGATCCGGTCTGTACCAATTGACATTGCCAATAGCAAAAAACCGAGGAAGGGGGCAATCCTTTCTAAGAAACTCAATGAAGCTGCGGACAGTTCTCATGCATACGTTGTTTTTAAAACGGAGGAATCAGCACAGGCCTCTTTGTCGCATAACATGGCTGTGTTTGCCGGAAATCATATACGGGTTGATAGAGCATGTCCACCACATAAAAAGTTGAAAGTAGGAAATGGGCCAATCTATGATCCCAAGAGAACTGTTTTTGTGGGTAACCTTCCATTTGATGTAAAGGATGAAGAATTGTACCAATTATTTTGTGGAATCGGCAATATGGGATCCAATGTTGAGGCTATTCGGGTCATTAGAGATCCCAAGGTGAATGTGGGGAAGGGCTTTGCGTATGTCTTCTTTAAAACAAGGGAAGCAGCAAACTCTGTAGTTGATAATCAAAAACTAGAGTTGCATGGTCGAAAACTGAGGCTCTTTCATGCCAAACGAAATCTGGCATCAACTCCGCTTAAGAAACGAAATAGGCCACATACGGAAGCTGATCGGACCCCAGTAAAGAAAAATGCAGGGGATTCAGGTTTAGGGACACCAGACAGCAGCAAGGGGGTAACGCCAAAAGCGGCTGTTGCATCCTATCAGGGCCTGCGTGCGAGCAAAAGCGGTTCCCAGAAGAAGATCCATACCAAAGGCAGTAGCACGAAATGGCTGAAATCACATTCAAACAGTAAAGAGAAGCCAATAGATCACAAGAGGAAAAGACCAGAGAAGACAAGTGAAAGAAAAGCGAAAAGACCAGCAGTTGCCAACAGAAAGGCAGCAGTGAAAGCGACGAAAAAAGGCATTGCAGCCCCAAAACAGGCCGGGGTGAAGCGCAAGTCCGATAGCCGAACTCCAGGGAGCTCTCACAGAAACAAGAGAGTCAAAAGGTTTAGATAG

Protein sequence

MGKKKTTDPINDPDESATVSAPFSVFETLFGRAGVENPGVSIFSNDNPFRRKDSDSIPAPAEKSPNTCSDGKGRKKGKEKRVGTDLDSAEEAVKSSSEIKKFKRKEKTRDPELDNVDDDGERGSESQGVLKKNKKKGTVLGSETTERSPEFDGELKIDEQRTDSKLGENVKFMKDRKKRKRDELEREYEAKKYGVAEVAEDEGEGSGGNVVGKKRKALDDPSEMMVTKEGFDDESKLLRTVFVGNLPLKVKKKALAKEFSQFGEIESVRIRSVPIDIANSKKPRKGAILSKKLNEAADSSHAYVVFKTEESAQASLSHNMAVFAGNHIRVDRACPPHKKLKVGNGPIYDPKRTVFVGNLPFDVKDEELYQLFCGIGNMGSNVEAIRVIRDPKVNVGKGFAYVFFKTREAANSVVDNQKLELHGRKLRLFHAKRNLASTPLKKRNRPHTEADRTPVKKNAGDSGLGTPDSSKGVTPKAAVASYQGLRASKSGSQKKIHTKGSSTKWLKSHSNSKEKPIDHKRKRPEKTSERKAKRPAVANRKAAVKATKKGIAAPKQAGVKRKSDSRTPGSSHRNKRVKRFR

Homology

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BLAST of CcUC10G187420 vs. NCBI nr
Match: XP_038905328.1 (nucleolar protein 12 [Benincasa hispida])

HSP 1 Score: 963.0 bits (2488), Expect = 1.2e-276
Identity = 521/589 (88.46%), Postives = 540/589 (91.68%), Query Frame = 0


Query: 1   MGKKKTTDPINDPDESATVSAPFSVFETLFGRAGVENPGVSIFSNDNPFRRKDSDSIPAP 60
           MGKKKTTDP N PD+ ATVSAPFSVFETLFGRAGVENPGVSIFS+DNPFRRKDSDS PAP
Sbjct: 1   MGKKKTTDPKNTPDDIATVSAPFSVFETLFGRAGVENPGVSIFSSDNPFRRKDSDSNPAP 60

Query: 61  AEKSPNTCSDG------KGRKKGKEKRVGTDLDSAEEAVKSSSEIKKFKRKEKTRDPELD 120
           AEKSP   SD       K RKKGKEKRVGTDLDSAEE VKSSSEIKK K+KEK+RD  LD
Sbjct: 61  AEKSPTGTSDTRYVDDVKSRKKGKEKRVGTDLDSAEEGVKSSSEIKKSKKKEKSRDRGLD 120

Query: 121 NV--DDDGERGSESQGVLKKNKKKGTVLGSETTERSPEFDGELKIDEQRTDSKLGENVKF 180
           NV  DDDGERGS+SQGVLKKNKKK  VLGSETTE+SPEF GELK+D+QR DSKLGENVK 
Sbjct: 121 NVDDDDDGERGSKSQGVLKKNKKKSAVLGSETTEKSPEFSGELKMDDQRVDSKLGENVKS 180

Query: 181 MKDRKKRKRDELEREYEAKKYGVAEVAEDEGEGSGGNVVGKKRKALDDPSEMMVTKEGFD 240
           MK+RKKRKRDELEREYE KKYGV+EVAEDEGEGSGGNVVGKKRKALDD SEMMVTKEGFD
Sbjct: 181 MKERKKRKRDELEREYETKKYGVSEVAEDEGEGSGGNVVGKKRKALDDSSEMMVTKEGFD 240

Query: 241 DESKLLRTVFVGNLPLKVKKKALAKEFSQFGEIESVRIRSVPIDIANSKKPRKGAILSKK 300
           DESKLLRTVFVGNLPLKVKKKAL KEFSQFGEIESVRIRSVPIDIANSKKPRKGAILSKK
Sbjct: 241 DESKLLRTVFVGNLPLKVKKKALGKEFSQFGEIESVRIRSVPIDIANSKKPRKGAILSKK 300

Query: 301 LNEAADSSHAYVVFKTEESAQASLSHNMAVFAGNHIRVDRACPPHKKLKVGNGPIYDPKR 360
           LNEAADSSHA+VVFKTEESAQA+LSHNMAVFAGNHIRVDRACPPHKKLKVGNGPIYDPKR
Sbjct: 301 LNEAADSSHAFVVFKTEESAQAALSHNMAVFAGNHIRVDRACPPHKKLKVGNGPIYDPKR 360

Query: 361 TVFVGNLPFDVKDEELYQLFCGIGNMGSNVEAIRVIRDPKVNVGKGFAYVFFKTREAANS 420
           TVFVGNLPFDVKDEELYQLFCGI NMGS+VEAIRVIRDPKVNVGKGFAYVFFKTREAANS
Sbjct: 361 TVFVGNLPFDVKDEELYQLFCGISNMGSSVEAIRVIRDPKVNVGKGFAYVFFKTREAANS 420

Query: 421 VVDNQKLELHGRKLRLFHAKRNLASTPLKKRNRPHTEADRTPVKKNAGDSGLGTPDSSKG 480
           VV+NQKLEL GR LRLFHAK N  STPL KR RP TEAD TP KKNA  SG+GTPDSSK 
Sbjct: 421 VVNNQKLELRGRTLRLFHAKPNPTSTPLTKRKRPPTEADYTPAKKNAVASGVGTPDSSKR 480

Query: 481 VTPKAAVASYQGLRASKSGSQKKIHTKGSSTKWLKSHSNSKEKPIDHKRKRPEKTSERKA 540
           VTPKA +ASYQGLRASKSGSQKKIHTKGSSTKW KSHSNSKEKP+DHKRKRPEKTSERK 
Sbjct: 481 VTPKATIASYQGLRASKSGSQKKIHTKGSSTKWPKSHSNSKEKPVDHKRKRPEKTSERKG 540

Query: 541 KRPAVANRKAAVKATKKGIAAPKQAGVKRKSDSRTPGSSHRNKRVKRFR 582
           KRPAVANRKA VKATK G+A+PKQAGVKRKSDSRTPGSS RNKRVKRFR
Sbjct: 541 KRPAVANRKAVVKATKNGVASPKQAGVKRKSDSRTPGSSQRNKRVKRFR 589

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BLAST of CcUC10G187420 vs. NCBI nr
Match: KAA0053031.1 (nucleolar protein 12 [Cucumis melo var. makuwa] >TYK11486.1 nucleolar protein 12 [Cucumis melo var. makuwa])

HSP 1 Score: 877.5 bits (2266), Expect = 6.5e-251
Identity = 486/584 (83.22%), Postives = 509/584 (87.16%), Query Frame = 0


Query: 1   MGKKKTTDPINDPDESATVSAPFSVFETLFGRAGVENPGVSIFSNDNPFRRKDSDSIPAP 60
           MGK K TD  N PDE  TV+ PFSVF+TLFG AGVENP VSIFS+DNPFRRKDSDSI  P
Sbjct: 1   MGKNKITDLKNPPDEIPTVATPFSVFDTLFGSAGVENPTVSIFSSDNPFRRKDSDSISPP 60

Query: 61  AEKSPNTCSDGKGRKKGKEKRVGTDLDSAEEAVKSSSEIKKFKR--KEKTRDPELDNVDD 120
             ++         R KGKEKRVG DLDS  E VK+SSEIKK K+  KEK+RD ELDNVDD
Sbjct: 61  LAEN--------SRTKGKEKRVGIDLDST-EGVKTSSEIKKSKKKEKEKSRDRELDNVDD 120

Query: 121 DGERGSESQGVLKKNKKKGTVLGSETTERSPEFDGELKIDEQRTDSKLGENVKFMKDRKK 180
           DGERG ESQG LK N+KKGT LGSET+E+S  FD           SKLGENVK MK+RKK
Sbjct: 121 DGERGFESQGGLKDNRKKGTALGSETSEKSRGFD----------RSKLGENVKLMKERKK 180

Query: 181 RKRDELEREYEAKKYGVAEVAEDEGEGSGGNVVGKKRKALDDPSEMMVTKEGFDDESKLL 240
           RKRDELEREYEAKKYGV++VAEDE EGSGGNVVGKKRKALDDPSEM+VTKEGFDDESKLL
Sbjct: 181 RKRDELEREYEAKKYGVSDVAEDEVEGSGGNVVGKKRKALDDPSEMLVTKEGFDDESKLL 240

Query: 241 RTVFVGNLPLKVKKKALAKEFSQFGEIESVRIRSVPIDIANSKKPRKGAILSKKLNEAAD 300
           RTVFVGNLPLKVKKKALAKEFSQFGEI+SVRIRSVPIDIANSKKPRKGAI+SKKLNEAAD
Sbjct: 241 RTVFVGNLPLKVKKKALAKEFSQFGEIDSVRIRSVPIDIANSKKPRKGAIISKKLNEAAD 300

Query: 301 SSHAYVVFKTEESAQASLSHNMAVFAGNHIRVDRACPPHKKLKVGNGPIYDPKRTVFVGN 360
           SSHAYVVFKTEESAQASLSHNMAVFAGNHIRVDRACPPHKKLKVGNGPIYDPKRTVFVGN
Sbjct: 301 SSHAYVVFKTEESAQASLSHNMAVFAGNHIRVDRACPPHKKLKVGNGPIYDPKRTVFVGN 360

Query: 361 LPFDVKDEELYQLFCGIGNMGSNVEAIRVIRDPKVNVGKGFAYVFFKTREAANSVVDNQK 420
           LPFDVKDEELYQLFCGI  MGS+VEA+RVIRDPKVNVGKGFAYVFFKTREAANSVV+NQK
Sbjct: 361 LPFDVKDEELYQLFCGIDTMGSSVEAVRVIRDPKVNVGKGFAYVFFKTREAANSVVNNQK 420

Query: 421 LELHGRKLRLFHAKRNLASTPLKKRNRPHTEADRTPVKKNAGDSGLGTPDSSKGVTPKAA 480
           LEL GR LRLFHAK N  STP KKRNRP TEAD TP KKNA DSGLGTPDSSK VTPKA 
Sbjct: 421 LELRGRTLRLFHAKTNPTSTPFKKRNRPPTEADHTPAKKNAVDSGLGTPDSSKRVTPKAT 480

Query: 481 VASYQGLRASKSGSQKKIHTKGSSTKWLKSHSNSKEKPIDH-KRKRPEKTSERKAKRPAV 540
            ASYQGLRASKSGSQKKIHTKGSSTKW KSHSNSKEKPIDH KRK PEKTSERK KRPAV
Sbjct: 481 NASYQGLRASKSGSQKKIHTKGSSTKWPKSHSNSKEKPIDHKKRKGPEKTSERKGKRPAV 540

Query: 541 ANRKAAVKATKKGIAAPKQAGVKRKSDSRTPGSSHRNKRVKRFR 582
           ANRKA   ATK GIA PKQAG+KRKSDSR+PGSSHRNKRVK+FR
Sbjct: 541 ANRKAVANATKNGIATPKQAGLKRKSDSRSPGSSHRNKRVKKFR 565

[Close]

BLAST of CcUC10G187420 vs. NCBI nr
Match: XP_008448668.1 (PREDICTED: nucleolar protein 12 [Cucumis melo])

HSP 1 Score: 876.7 bits (2264), Expect = 1.1e-250
Identity = 485/584 (83.05%), Postives = 508/584 (86.99%), Query Frame = 0


Query: 1   MGKKKTTDPINDPDESATVSAPFSVFETLFGRAGVENPGVSIFSNDNPFRRKDSDSIPAP 60
           MGK K TD  N PDE  TV+ PFSVF+TLFG AGVENP VSIFS+DNPFRRKDSDSI  P
Sbjct: 1   MGKNKITDLKNPPDEIPTVATPFSVFDTLFGSAGVENPSVSIFSSDNPFRRKDSDSISPP 60

Query: 61  AEKSPNTCSDGKGRKKGKEKRVGTDLDSAEEAVKSSSEIKKFKR--KEKTRDPELDNVDD 120
             ++         R KGKEKRVG DLDS  E VK+SSEIKK K+  KEK+RD ELDNVDD
Sbjct: 61  LAEN--------SRTKGKEKRVGIDLDST-EGVKTSSEIKKSKKKEKEKSRDRELDNVDD 120

Query: 121 DGERGSESQGVLKKNKKKGTVLGSETTERSPEFDGELKIDEQRTDSKLGENVKFMKDRKK 180
           DGERG ESQG LK N+KKGT LGSET+E+S  FD           SKLGENVK MK+RKK
Sbjct: 121 DGERGFESQGGLKDNRKKGTALGSETSEKSRGFD----------RSKLGENVKLMKERKK 180

Query: 181 RKRDELEREYEAKKYGVAEVAEDEGEGSGGNVVGKKRKALDDPSEMMVTKEGFDDESKLL 240
           RKRDELEREYEAKKYGV++VAEDE EGSGGNVVGKKRKALDDPSEM+VTKEGFDDESKLL
Sbjct: 181 RKRDELEREYEAKKYGVSDVAEDEVEGSGGNVVGKKRKALDDPSEMLVTKEGFDDESKLL 240

Query: 241 RTVFVGNLPLKVKKKALAKEFSQFGEIESVRIRSVPIDIANSKKPRKGAILSKKLNEAAD 300
           RTVFVGNLPLKVKKKALAKEFSQFGEI+SVRIRSVPIDIANSKKPRKGAI+SKKLNEAAD
Sbjct: 241 RTVFVGNLPLKVKKKALAKEFSQFGEIDSVRIRSVPIDIANSKKPRKGAIISKKLNEAAD 300

Query: 301 SSHAYVVFKTEESAQASLSHNMAVFAGNHIRVDRACPPHKKLKVGNGPIYDPKRTVFVGN 360
           SSHAYVVFKTEESAQASLSHNMAVFAGNHIRVDRACPPHKKLKVGNGPIYDPKRTVFVGN
Sbjct: 301 SSHAYVVFKTEESAQASLSHNMAVFAGNHIRVDRACPPHKKLKVGNGPIYDPKRTVFVGN 360

Query: 361 LPFDVKDEELYQLFCGIGNMGSNVEAIRVIRDPKVNVGKGFAYVFFKTREAANSVVDNQK 420
           LPFDVKDEELYQLFCGI  MGS+VEA+RVIRDPKVNVGKGFAYVFFKTREA NSVV+NQK
Sbjct: 361 LPFDVKDEELYQLFCGIDTMGSSVEAVRVIRDPKVNVGKGFAYVFFKTREAVNSVVNNQK 420

Query: 421 LELHGRKLRLFHAKRNLASTPLKKRNRPHTEADRTPVKKNAGDSGLGTPDSSKGVTPKAA 480
           LEL GR LRLFHAK N  STP KKRNRP TEAD TP KKNA DSGLGTPDSSK VTPKA 
Sbjct: 421 LELRGRTLRLFHAKTNPTSTPFKKRNRPPTEADHTPAKKNAVDSGLGTPDSSKRVTPKAT 480

Query: 481 VASYQGLRASKSGSQKKIHTKGSSTKWLKSHSNSKEKPIDH-KRKRPEKTSERKAKRPAV 540
            ASYQGLRASKSGSQKKIHTKGSSTKW KSHSNSKEKPIDH KRK PEKTSERK KRPAV
Sbjct: 481 NASYQGLRASKSGSQKKIHTKGSSTKWPKSHSNSKEKPIDHKKRKGPEKTSERKGKRPAV 540

Query: 541 ANRKAAVKATKKGIAAPKQAGVKRKSDSRTPGSSHRNKRVKRFR 582
           ANRKA   ATK GIA PKQAG+KRKSDSR+PGSSHRNKRVK+FR
Sbjct: 541 ANRKAVANATKNGIATPKQAGLKRKSDSRSPGSSHRNKRVKKFR 565

[Close]

BLAST of CcUC10G187420 vs. NCBI nr
Match: KGN55740.1 (hypothetical protein Csa_010366 [Cucumis sativus])

HSP 1 Score: 862.4 bits (2227), Expect = 2.2e-246
Identity = 478/585 (81.71%), Postives = 506/585 (86.50%), Query Frame = 0


Query: 1   MGKKKTTDPINDPDESATVSAPFSVFETLFGRAGVENPGVSIFSNDNPFRRKDSDSIPAP 60
           MG  K TDP N  +E+ TV++ FSVF+TLFG AGVENP VSIFS DNPFRRK SDS+P P
Sbjct: 1   MGNNKITDPKNPSEETPTVASTFSVFDTLFGSAGVENPPVSIFSTDNPFRRKASDSVPPP 60

Query: 61  AEKSPNTCSDGKGRKKGKEKRVGTDLDSAEEAVKSSSEIKKFKRKEKTR--DPELDNVDD 120
             +          RKKGK+KRVG DLDS  E VK+SSEIKK K+KEK +  D ELDNVDD
Sbjct: 61  PAEI--------SRKKGKDKRVGIDLDST-EGVKTSSEIKKSKKKEKKKSLDRELDNVDD 120

Query: 121 DGERGSESQGVLK-KNKKKGTVLGSETTERSPEFDGELKIDEQRTDSKLGENVKFMKDRK 180
           DGERG ESQG LK  +KKKGTVLGSET+E+S  F+G          SKLGENVK MK+RK
Sbjct: 121 DGERGFESQGGLKDSSKKKGTVLGSETSEKSHGFEG----------SKLGENVKLMKERK 180

Query: 181 KRKRDELEREYEAKKYGVAEVAEDEGEGSGGNVVGKKRKALDDPSEMMVTKEGFDDESKL 240
           KRKRDELEREYEAKKYGV++VAEDE EGSGGNVVGKKRKALDDPSEM+VTKEGFDDESKL
Sbjct: 181 KRKRDELEREYEAKKYGVSDVAEDEVEGSGGNVVGKKRKALDDPSEMLVTKEGFDDESKL 240

Query: 241 LRTVFVGNLPLKVKKKALAKEFSQFGEIESVRIRSVPIDIANSKKPRKGAILSKKLNEAA 300
           LRTVFVGNLPLKVKKKALAKEFSQFGEI+SVRIRSVPIDIANSKKPRKGAI+SKKLNEAA
Sbjct: 241 LRTVFVGNLPLKVKKKALAKEFSQFGEIDSVRIRSVPIDIANSKKPRKGAIISKKLNEAA 300

Query: 301 DSSHAYVVFKTEESAQASLSHNMAVFAGNHIRVDRACPPHKKLKVGNGPIYDPKRTVFVG 360
           DSSHAYVVFKTEESAQASLSHNMAVFAGNHIRVDRACPPHKKLKVGNGPIYDPKRTVFVG
Sbjct: 301 DSSHAYVVFKTEESAQASLSHNMAVFAGNHIRVDRACPPHKKLKVGNGPIYDPKRTVFVG 360

Query: 361 NLPFDVKDEELYQLFCGIGNMGSNVEAIRVIRDPKVNVGKGFAYVFFKTREAANSVVDNQ 420
           NLPFDVKDEELYQLFCGI NMGS+VEA+RVIRDPKVNVGKGFAYVFFKTREAANSVV+NQ
Sbjct: 361 NLPFDVKDEELYQLFCGIDNMGSSVEAVRVIRDPKVNVGKGFAYVFFKTREAANSVVNNQ 420

Query: 421 KLELHGRKLRLFHAKRNLASTPLKKRNRPHTEADRTPVKKNAGDSGLGTPDSSKGVTPKA 480
            LEL GR LRLFH K N  STP KKRNRP TEADRTP KK   DSGLGTPDSSK VTPKA
Sbjct: 421 LLELRGRTLRLFHTKTNPTSTPFKKRNRPPTEADRTPAKKKYVDSGLGTPDSSKRVTPKA 480

Query: 481 AVASYQGLRASKSGSQKKIHTKGSSTKWLKSHSNSKEKPIDHKRKR-PEKTSERKAKRPA 540
              SYQGLRASKSGSQKKIHTKGSSTKW KSHSNSKEKPIDHK++R PEKTSERK KRPA
Sbjct: 481 TNVSYQGLRASKSGSQKKIHTKGSSTKWPKSHSNSKEKPIDHKKRRGPEKTSERKGKRPA 540

Query: 541 VANRKAAVKATKKGIAAPKQAGVKRKSDSRTPGSSHRNKRVKRFR 582
           VANRKA   ATK GIA PKQ G+KRKSDSR+PGSSHRNKRVKRFR
Sbjct: 541 VANRKAVAMATKNGIATPKQTGLKRKSDSRSPGSSHRNKRVKRFR 566

[Close]

BLAST of CcUC10G187420 vs. NCBI nr
Match: NP_001267538.1 (uncharacterized LOC101206555 [Cucumis sativus] >ACA50448.1 putative RNA recognition motif-containing protein [Cucumis sativus])

HSP 1 Score: 859.8 bits (2220), Expect = 1.4e-245
Identity = 477/585 (81.54%), Postives = 505/585 (86.32%), Query Frame = 0


Query: 1   MGKKKTTDPINDPDESATVSAPFSVFETLFGRAGVENPGVSIFSNDNPFRRKDSDSIPAP 60
           MG  K TDP N  +E+ TV++ FSVF+TLFG AGVENP VSIFS DNPFRRK SDS+P P
Sbjct: 1   MGNNKITDPKNPSEETPTVASTFSVFDTLFGSAGVENPPVSIFSTDNPFRRKASDSVPPP 60

Query: 61  AEKSPNTCSDGKGRKKGKEKRVGTDLDSAEEAVKSSSEIKKFKRKEKTR--DPELDNVDD 120
             +          RKKGK+KRVG DLDS  E VK+SSEIKK K+KEK +  D ELDNVDD
Sbjct: 61  PAEI--------SRKKGKDKRVGIDLDST-EGVKTSSEIKKSKKKEKKKSLDRELDNVDD 120

Query: 121 DGERGSESQGVLK-KNKKKGTVLGSETTERSPEFDGELKIDEQRTDSKLGENVKFMKDRK 180
           DGERG ESQG LK  +KKKGTVLGSET+E+S  F+G          SKLGENVK MK+RK
Sbjct: 121 DGERGFESQGGLKDSSKKKGTVLGSETSEKSHGFEG----------SKLGENVKLMKERK 180

Query: 181 KRKRDELEREYEAKKYGVAEVAEDEGEGSGGNVVGKKRKALDDPSEMMVTKEGFDDESKL 240
           KRKRDELEREYEAKKYGV++VAEDE EGSGGNVVGKKRKALDDPSEM+VTKEGFDDESKL
Sbjct: 181 KRKRDELEREYEAKKYGVSDVAEDEVEGSGGNVVGKKRKALDDPSEMLVTKEGFDDESKL 240

Query: 241 LRTVFVGNLPLKVKKKALAKEFSQFGEIESVRIRSVPIDIANSKKPRKGAILSKKLNEAA 300
           LRTVFVGNLPLKVKKKALAKEFSQFGEI+SVRIRSVPIDIANSKKPRKGAI+SKKLNEAA
Sbjct: 241 LRTVFVGNLPLKVKKKALAKEFSQFGEIDSVRIRSVPIDIANSKKPRKGAIISKKLNEAA 300

Query: 301 DSSHAYVVFKTEESAQASLSHNMAVFAGNHIRVDRACPPHKKLKVGNGPIYDPKRTVFVG 360
           DSSHAYVVFKTEESA ASLSHNMAVFAGNHIRVDRACPPHKKLKVGNGPIYDPKRTVFVG
Sbjct: 301 DSSHAYVVFKTEESAWASLSHNMAVFAGNHIRVDRACPPHKKLKVGNGPIYDPKRTVFVG 360

Query: 361 NLPFDVKDEELYQLFCGIGNMGSNVEAIRVIRDPKVNVGKGFAYVFFKTREAANSVVDNQ 420
           NLPFDVKDEELYQLFCGI NMGS+VEA+RVIRDPKVNVGKGFAYVFFKTREAANSVV+NQ
Sbjct: 361 NLPFDVKDEELYQLFCGIDNMGSSVEAVRVIRDPKVNVGKGFAYVFFKTREAANSVVNNQ 420

Query: 421 KLELHGRKLRLFHAKRNLASTPLKKRNRPHTEADRTPVKKNAGDSGLGTPDSSKGVTPKA 480
            LEL GR LRLFH K N  STP KKRNRP TEADRTP KK   DSGLGTPDSSK VTPKA
Sbjct: 421 LLELRGRTLRLFHTKTNPTSTPFKKRNRPPTEADRTPAKKKYVDSGLGTPDSSKRVTPKA 480

Query: 481 AVASYQGLRASKSGSQKKIHTKGSSTKWLKSHSNSKEKPIDHKRKR-PEKTSERKAKRPA 540
              SYQGLRASKSGSQKKIHTKGSSTKW KSHSNSKEKPIDHK++R PEKTSERK KRPA
Sbjct: 481 TNVSYQGLRASKSGSQKKIHTKGSSTKWPKSHSNSKEKPIDHKKRRGPEKTSERKGKRPA 540

Query: 541 VANRKAAVKATKKGIAAPKQAGVKRKSDSRTPGSSHRNKRVKRFR 582
           VANRKA   ATK GIA PKQ G+KRKSDSR+PGSSHRNKRVKRFR
Sbjct: 541 VANRKAVAMATKNGIATPKQTGLKRKSDSRSPGSSHRNKRVKRFR 566

[Close]

BLAST of CcUC10G187420 vs. ExPASy Swiss-Prot
Match: O13741 (Nucleolar protein 12 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=nop12 PE=1 SV=1)

HSP 1 Score: 137.5 bits (345), Expect = 4.8e-31
Identity = 117/362 (32.32%), Postives = 183/362 (50.55%), Query Frame = 0


Query: 124 SESQGVLKKNKKKGTVLGSETTERSPEFDGELKIDEQRTDSKLGENVKFMKDRKKRKRDE 183
           S+S+ + K   K+ TVL  +  E       E   +   +D+K  +N+K    +KK+K ++
Sbjct: 34  SQSKPIPKPVAKETTVLTKKDVEVEEANGVEEAAETIESDTKEVQNIKPKSKKKKKKLND 93

Query: 184 LEREYEAKKYG--VAEVAEDEGEGSGG-------------NVVGKKRKALDDPSEMMVTK 243
              + E K +   +AE  E++ + S G             +V+ ++    D  SE  V +
Sbjct: 94  SSDDIEGKYFEELLAEEDEEKDKDSAGLINDEEDKSPAKQSVLEERTSQEDVKSEREVAE 153

Query: 244 EGFDDESKLLRTVFVGNLPLKV-----KKKALAKEFSQFGEIESVRIRSVPIDIANSKKP 303
           +  ++  K  +TVFV NLP +V       K L K F QFG ++S+R RS+    A    P
Sbjct: 154 KLANELEKSDKTVFVNNLPARVVTNKGDYKDLTKHFRQFGAVDSIRFRSLAFSEA---IP 213

Query: 304 RKGAILSKKLNEAADSSHAYVVFKTEESAQASLSHNMAVFAGNHIRVDRACPPHKKLKVG 363
           RK A   KK +   D+ +AY+VF+   SA+++LS N  +F   H+RVD    P  +    
Sbjct: 214 RKVAFFEKKFHSERDTVNAYIVFRDSSSARSALSLNGTMFMDRHLRVDSVSHPMPQ---- 273

Query: 364 NGPIYDPKRTVFVGNLPFDVKDEELYQLFCGIGNMGSNVEAIRVIRDPKVNVGKGFAYVF 423
                D KR VFVGNL F+ ++E L++ F   G+ GS ++ +R++RDPK N+GKGFAY+ 
Sbjct: 274 -----DTKRCVFVGNLAFEAEEEPLWRYF---GDCGS-IDYVRIVRDPKTNLGKGFAYIQ 333

Query: 424 FK-TREAANSVVDNQKLELHGRKLRLFHAKRNL-ASTPLKKRNRPHTEADRTPVKKNAGD 464
           FK T     +++ N+K    GR LR+  AK     S    KR    T   +   +K  G 
Sbjct: 334 FKDTMGVDKALLLNEKKMPEGRTLRIMRAKSTKPKSITRSKRGDEKTRTLQGRARKLIGK 379

[Close]

BLAST of CcUC10G187420 vs. ExPASy Swiss-Prot
Match: Q5M9F1 (RNA-binding protein 34 OS=Rattus norvegicus OX=10116 GN=Rbm34 PE=1 SV=1)

HSP 1 Score: 117.9 bits (294), Expect = 3.9e-25
Identity = 116/346 (33.53%), Postives = 166/346 (47.98%), Query Frame = 0


Query: 170 VKFMKDRKKRKRDELEREYEAKKYGVAEVAEDEGEG-----SGGNVVGKKRKALD----- 229
           VK + D  KR  +   RE       + E+ +D+G+G     S G V     +ALD     
Sbjct: 106 VKKLSDADKRLAN---RESALANADLEEIRQDQGQGRRRSQSRGKVT--DGEALDVALSL 165

Query: 230 DPSEMMVTKEGFDDESKLL---RTVFVGNLPLKVKKKALAKEFSQFGEIESVRIRSV-PI 289
           +      TK   + E + L   RTVFVGNLP+   KK L   F ++G++ESVR RSV P 
Sbjct: 166 NEDGRQRTKVPLNPEEERLKNERTVFVGNLPVTCNKKKLKSFFKEYGQVESVRFRSVMPA 225

Query: 290 DIANSKKPRKGAILSKKLNEAADSSHAYVVFKTEESAQASLSHNMAVFA-GNHIRVDRAC 349
           +   SKK    A + +K +    S +AYVVFK E +A  +L  N A  A G  IRVD A 
Sbjct: 226 EGTLSKKL---AAIKRKFHPDQKSINAYVVFKEERAAAKALQRNGAQIAEGFRIRVDLAS 285

Query: 350 PPHKKLKVGNGPIYDPKRTVFVGNLPFDVKDEELYQLFCGIGNMGSNVEAIRVIRDPKVN 409
               +           KR+VFVGNLP+ V +  L + F   G    ++ A+R++R+P   
Sbjct: 286 ETASR----------DKRSVFVGNLPYRVDESALEEHFLDCG----SIVAVRIVRNPLTG 345

Query: 410 VGKGFAYVFFKTREAANSVVDNQKLELHGRKLRLFHAKRNLASTPLKKRN-RPHTEADRT 469
           VG+GF YV F+  +A +  +     EL GRKLR+    R++    LK++N  P  + D +
Sbjct: 346 VGRGFGYVLFENTDAVHLALKLNNSELMGRKLRVM---RSVNKEKLKQQNSNPSVKKDGS 405

Query: 470 PVKKNAGDSGLGTPDSSKGVTPKAAVASYQGLRASKSGSQKKIHTK 500
             K+        T    K  +  A +     L   K G +KK  TK
Sbjct: 406 KSKQRLN----FTSKEGKSHSKNAFIGEKAVLMKKKKGQKKKGQTK 422

[Close]

BLAST of CcUC10G187420 vs. ExPASy Swiss-Prot
Match: Q5AHI7 (Nucleolar protein 12 OS=Candida albicans (strain SC5314 / ATCC MYA-2876) OX=237561 GN=NOP12 PE=3 SV=2)

HSP 1 Score: 112.1 bits (279), Expect = 2.2e-23
Identity = 141/466 (30.26%), Postives = 212/466 (45.49%), Query Frame = 0


Query: 88  SAEEAVKSSSEIKKFKR----KEKTRDPELDNVDDDGERGSESQGVLKKNKKKGTVLGSE 147
           S +E VK    + K  +    K++T + E        E   E +    ++ +      +E
Sbjct: 31  SKDELVKKQRTVIKIPKVTAPKQQTNENESTLNQSANESDEEEEEYNDESNEGDDSDDAE 90

Query: 148 TTERSPEFDGELK-IDEQRTDSKLGENVKFMKDRKKRKRDELEREYEAKKYGVAEVAEDE 207
            TE + + D E + ++ Q  D  L E        +  ++DE +   EAK    ++VAE+ 
Sbjct: 91  QTEPTSKNDDENENLEAQYFDKLLSE--------QNEEQDESKESSEAKS---SKVAEER 150

Query: 208 GEGSGGNVVGKKRKALDDPSEMMVTKEGFDDESKLLRTVFVGNLPLKV-KKKALAKE--- 267
            +      V  K K L+                K  RTVFVGN+P  V   K +AK    
Sbjct: 151 TKAKVATTVDLKEKELE----------------KADRTVFVGNVPADVITSKIIAKNFKN 210

Query: 268 -FSQFGEIESVRIRSVPIDIANSKKPRKGAILSKKLNEAADSSHAYVVFKTEESAQASLS 327
            F  +G+I+S+R RS+  D      PRK A   K L+++ DS +AY+V+K + ++ A+  
Sbjct: 211 LFKHYGKIDSIRYRSISFD---EHLPRKVAFAKKNLHKSRDSVNAYIVYKEKPASIAAKE 270

Query: 328 HNMAVFAGNHIRVDRACPPHKKLKVGNGPIYDPKRTVFVGNLPFDVKDEELYQLFCGIGN 387
            N  VF  +H+RVD    P  K         D KRT+FVGNL F+ K+E L++ F     
Sbjct: 271 LNATVFEDHHLRVDHVSHPAPK---------DNKRTIFVGNLDFEEKEETLWKYF--NSK 330

Query: 388 MGSNVEAIRVIRDPKVNVGKGFAYVFFKTREAANS--VVDNQKLEL----HGRKLRLFHA 447
           +  +VE++R+IRD K N+GKGFA V FK   + N   +++++ LE      GRKLR+  A
Sbjct: 331 LDQDVESVRIIRDSKTNLGKGFALVQFKDTLSVNKALLLNDKPLETGTQKKGRKLRISRA 390

Query: 448 KRNLASTPLKKRNRPHTEADRTPVKKNAGDSGLGTPDSSKGVTPKAAVASYQGLRASKSG 507
           K N A   L   N      D    K  AG S     D+ K    +A     +  R S  G
Sbjct: 391 KSN-AKPSLMSPN----HFDNQKKKFAAGKSQQKLNDNQKTKIGRAQSTLGKADR-STVG 449

Query: 508 SQKKI------HTKGSSTKWLKSHSNSKEKPIDHKRKRPEKTSERK 532
             K+I       TKG + K +K     K+      R+R  K  E +
Sbjct: 451 KAKRIILEGQRATKGEAIKGIKGSKKGKKVKKPRIRERSTKFKEER 449

[Close]

BLAST of CcUC10G187420 vs. ExPASy Swiss-Prot
Match: Q6BTS9 (Nucleolar protein 12 OS=Debaryomyces hansenii (strain ATCC 36239 / CBS 767 / BCRC 21394 / JCM 1990 / NBRC 0083 / IGC 2968) OX=284592 GN=NOP12 PE=3 SV=2)

HSP 1 Score: 109.8 bits (273), Expect = 1.1e-22
Identity = 126/437 (28.83%), Postives = 196/437 (44.85%), Query Frame = 0


Query: 152 DGELKIDEQRTDSKLGENVKFMKDRKKRKRDELEREYEAKKYG---------VAEVAEDE 211
           D    I+E   D +     +  + +K R++ +L  + E+K Y            +V +DE
Sbjct: 58  DQSESIEETEEDKERDIKAEAKRAKKTRQKKDLNEDLESKYYNKLLKEQDEEAPKVEKDE 117

Query: 212 ----GEGSGGNVVGKKRKALDDPSEMMVTKEGFDDE-SKLLRTVFVGNLPLKV-----KK 271
               G GS  +   ++ ++ +  S+   T +  ++E  K  RTVFVGN+   V       
Sbjct: 118 KVESGSGSDSDSDDEEDQSGETKSKRAKTVDLKENELEKAERTVFVGNVNASVVGSKPMY 177

Query: 272 KALAKEFSQFGEIESVRIRSVPIDIANSKKPRKGAILSKKLNEAADSSHAYVVF-KTEES 331
           K   K FSQ+G+I+S+R RS+  D A    PRK A   KKL+ + D+ +AYVVF + E S
Sbjct: 178 KKFKKLFSQYGKIQSIRFRSISFDDA---VPRKVAFAKKKLHSSRDTLNAYVVFAEKEPS 237

Query: 332 AQASLSHNMAVFAGNHIRVDRACPPHKKLKVGNGPIYDPKRTVFVGNLPFDVKDEELYQL 391
            +     N   F   H+RVD    P  K         D KRT+FVGNL F+ K+E L++ 
Sbjct: 238 LKCVPKLNATEFEHAHLRVDHVAHPAPK---------DNKRTIFVGNLDFEEKEETLWRY 297

Query: 392 FCGIGNMGSNVEAIRVIRDPKVNVGKGFAYVFFKTREAANSVV---DNQKLELHGRKLRL 451
           F       ++VE++RVIRD K NVGKGFA V FK   + N  +   D        RKLR+
Sbjct: 298 F--NSKTDNDVESVRVIRDAKTNVGKGFALVQFKDTLSVNKSLLLNDKPMSAEKKRKLRI 357

Query: 452 FHAKRNLASTPLKKRNRPHTEADRTPVKKNAGDSGLGTPDSSKGVTPKAAVASYQGLRAS 511
             AK +   + L      H +  +     N         D  +    +A     +  RA+
Sbjct: 358 SKAKAHTKPSILSPN---HIDNSKKAYASNKSKMSAKLSDQQRTKLGRAQTVLNKSDRAT 417

Query: 512 KSGSQKKIH----TKGSSTKWLKSHSNSKEKPIDHKRKRPEKTSERKAKRPAVANRKAAV 562
              S+  I     +KG S   +K   +++               +RK K+P + +R    
Sbjct: 418 AGKSRNIIEGQRASKGDSIAGIKGLKSNR---------------DRKIKKPRIRDRSTKF 462

[Close]

BLAST of CcUC10G187420 vs. ExPASy Swiss-Prot
Match: Q6C2Q7 (Nucleolar protein 12 OS=Yarrowia lipolytica (strain CLIB 122 / E 150) OX=284591 GN=NOP12 PE=3 SV=1)

HSP 1 Score: 106.7 bits (265), Expect = 9.1e-22
Identity = 153/511 (29.94%), Postives = 229/511 (44.81%), Query Frame = 0


Query: 95  SSSEIKKFKRKEKTRDPELDNVDDDGERGSESQGVLKKNKKKGTVLGSETTERSPEFDGE 154
           SS   +K +R  K  DP  D  +D  E   E +   +  + +      E  E   E D +
Sbjct: 17  SSGPRQKPQRAGKV-DPVRDQQEDKMEVEDEEEDEEEDEEDEEEDEEDEEDEEEKEEDDD 76

Query: 155 LKIDEQRTDSKLGENVKFMKDRKKRKRD--ELEREYEAKKYGVAEVAEDE---GEGSGGN 214
              DE+  +  +   +K  K  KK K +  +LE +Y AK     EVAE++    E S   
Sbjct: 77  DDDDEEEIEEPV---IKKSKKNKKSKEESADLEDQYMAKL--AEEVAEEKPMVAETSAEE 136

Query: 215 V-VGKKRKALDDPSEMMV---TKEGFDDESKLL----RTVFVGNLPLKV--------KKK 274
           + V +     +D  E+ V   TK+  +  +K L     T+FVGN+  +V          K
Sbjct: 137 IKVDEPESDSEDEPELDVDEETKKKLEATNKELDKADYTIFVGNVSSEVITDKTVYNNFK 196

Query: 275 ALAKEFSQFGEIESVRIRSVPIDIANSKKPRKGAILSKKLNEAADSSHAYVVFKTEESAQ 334
           AL   F+  G + SVR RS+     +   PRK A +S++ +   D+ +AY+VFK  +S +
Sbjct: 197 AL---FAAIGTVASVRFRSISF---SKLLPRKVAFISQQFHSKRDTVNAYIVFKNVKSVK 256

Query: 335 ASLSHNMAVFAGNHIRVDRACPPHKKLKVGNGPIYDPKRTVFVGNLPFDVKDEELYQLFC 394
            +L+ N +VF G H+RVD    P  +         D KR VFVG L F+ ++E L++ F 
Sbjct: 257 GALTLNGSVFKGFHMRVDSVAHPGAQ---------DHKRCVFVGALDFEEQEESLWEAFS 316

Query: 395 GIGNMGSNVEAIRVIRDPKVNVGKGFAYVFFKTREAANSVV--------DNQKLELHGRK 454
             G    +VE +R++RDPK NVGKGFAYV FK   +    +        +  K   + RK
Sbjct: 317 SCG----DVEYVRIVRDPKTNVGKGFAYVQFKDVNSVEQALLLNGKGINELSKSTTNKRK 376

Query: 455 LRLFHAKRNLASTPLKKRNRPHTEADRTPVKKNAGDSGLGTPDSSKGVTPKAAVAS--YQ 514
           LR+  AK   +    K+ +  +    +T        S  G   S  G   KA + S   +
Sbjct: 377 LRVSRAKSQHSQERAKQADMKNIRNAKTEGLSRDEKSHFGRAQSRLGKAGKAQLQSIVQE 436

Query: 515 GLRASKSGSQKKIHTKGSSTKWLKSHSNSKEKPIDHKRKRPEKTSERKAKRPAVANRKAA 570
           GLRA K     K++   S  + +K + N  EKP    + R EK   RKA      N    
Sbjct: 437 GLRAKKEDG--KVNLARSKRRGVKPNKNRVEKP---GQSRAEK---RKAMFGTPTNGAPG 494

[Close]

BLAST of CcUC10G187420 vs. ExPASy TrEMBL
Match: A0A5A7UHL8 (Nucleolar protein 12 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold139G001480 PE=4 SV=1)

HSP 1 Score: 877.5 bits (2266), Expect = 3.1e-251
Identity = 486/584 (83.22%), Postives = 509/584 (87.16%), Query Frame = 0


Query: 1   MGKKKTTDPINDPDESATVSAPFSVFETLFGRAGVENPGVSIFSNDNPFRRKDSDSIPAP 60
           MGK K TD  N PDE  TV+ PFSVF+TLFG AGVENP VSIFS+DNPFRRKDSDSI  P
Sbjct: 1   MGKNKITDLKNPPDEIPTVATPFSVFDTLFGSAGVENPTVSIFSSDNPFRRKDSDSISPP 60

Query: 61  AEKSPNTCSDGKGRKKGKEKRVGTDLDSAEEAVKSSSEIKKFKR--KEKTRDPELDNVDD 120
             ++         R KGKEKRVG DLDS  E VK+SSEIKK K+  KEK+RD ELDNVDD
Sbjct: 61  LAEN--------SRTKGKEKRVGIDLDST-EGVKTSSEIKKSKKKEKEKSRDRELDNVDD 120

Query: 121 DGERGSESQGVLKKNKKKGTVLGSETTERSPEFDGELKIDEQRTDSKLGENVKFMKDRKK 180
           DGERG ESQG LK N+KKGT LGSET+E+S  FD           SKLGENVK MK+RKK
Sbjct: 121 DGERGFESQGGLKDNRKKGTALGSETSEKSRGFD----------RSKLGENVKLMKERKK 180

Query: 181 RKRDELEREYEAKKYGVAEVAEDEGEGSGGNVVGKKRKALDDPSEMMVTKEGFDDESKLL 240
           RKRDELEREYEAKKYGV++VAEDE EGSGGNVVGKKRKALDDPSEM+VTKEGFDDESKLL
Sbjct: 181 RKRDELEREYEAKKYGVSDVAEDEVEGSGGNVVGKKRKALDDPSEMLVTKEGFDDESKLL 240

Query: 241 RTVFVGNLPLKVKKKALAKEFSQFGEIESVRIRSVPIDIANSKKPRKGAILSKKLNEAAD 300
           RTVFVGNLPLKVKKKALAKEFSQFGEI+SVRIRSVPIDIANSKKPRKGAI+SKKLNEAAD
Sbjct: 241 RTVFVGNLPLKVKKKALAKEFSQFGEIDSVRIRSVPIDIANSKKPRKGAIISKKLNEAAD 300

Query: 301 SSHAYVVFKTEESAQASLSHNMAVFAGNHIRVDRACPPHKKLKVGNGPIYDPKRTVFVGN 360
           SSHAYVVFKTEESAQASLSHNMAVFAGNHIRVDRACPPHKKLKVGNGPIYDPKRTVFVGN
Sbjct: 301 SSHAYVVFKTEESAQASLSHNMAVFAGNHIRVDRACPPHKKLKVGNGPIYDPKRTVFVGN 360

Query: 361 LPFDVKDEELYQLFCGIGNMGSNVEAIRVIRDPKVNVGKGFAYVFFKTREAANSVVDNQK 420
           LPFDVKDEELYQLFCGI  MGS+VEA+RVIRDPKVNVGKGFAYVFFKTREAANSVV+NQK
Sbjct: 361 LPFDVKDEELYQLFCGIDTMGSSVEAVRVIRDPKVNVGKGFAYVFFKTREAANSVVNNQK 420

Query: 421 LELHGRKLRLFHAKRNLASTPLKKRNRPHTEADRTPVKKNAGDSGLGTPDSSKGVTPKAA 480
           LEL GR LRLFHAK N  STP KKRNRP TEAD TP KKNA DSGLGTPDSSK VTPKA 
Sbjct: 421 LELRGRTLRLFHAKTNPTSTPFKKRNRPPTEADHTPAKKNAVDSGLGTPDSSKRVTPKAT 480

Query: 481 VASYQGLRASKSGSQKKIHTKGSSTKWLKSHSNSKEKPIDH-KRKRPEKTSERKAKRPAV 540
            ASYQGLRASKSGSQKKIHTKGSSTKW KSHSNSKEKPIDH KRK PEKTSERK KRPAV
Sbjct: 481 NASYQGLRASKSGSQKKIHTKGSSTKWPKSHSNSKEKPIDHKKRKGPEKTSERKGKRPAV 540

Query: 541 ANRKAAVKATKKGIAAPKQAGVKRKSDSRTPGSSHRNKRVKRFR 582
           ANRKA   ATK GIA PKQAG+KRKSDSR+PGSSHRNKRVK+FR
Sbjct: 541 ANRKAVANATKNGIATPKQAGLKRKSDSRSPGSSHRNKRVKKFR 565

[Close]

BLAST of CcUC10G187420 vs. ExPASy TrEMBL
Match: A0A1S3BK91 (nucleolar protein 12 OS=Cucumis melo OX=3656 GN=LOC103490769 PE=4 SV=1)

HSP 1 Score: 876.7 bits (2264), Expect = 5.3e-251
Identity = 485/584 (83.05%), Postives = 508/584 (86.99%), Query Frame = 0


Query: 1   MGKKKTTDPINDPDESATVSAPFSVFETLFGRAGVENPGVSIFSNDNPFRRKDSDSIPAP 60
           MGK K TD  N PDE  TV+ PFSVF+TLFG AGVENP VSIFS+DNPFRRKDSDSI  P
Sbjct: 1   MGKNKITDLKNPPDEIPTVATPFSVFDTLFGSAGVENPSVSIFSSDNPFRRKDSDSISPP 60

Query: 61  AEKSPNTCSDGKGRKKGKEKRVGTDLDSAEEAVKSSSEIKKFKR--KEKTRDPELDNVDD 120
             ++         R KGKEKRVG DLDS  E VK+SSEIKK K+  KEK+RD ELDNVDD
Sbjct: 61  LAEN--------SRTKGKEKRVGIDLDST-EGVKTSSEIKKSKKKEKEKSRDRELDNVDD 120

Query: 121 DGERGSESQGVLKKNKKKGTVLGSETTERSPEFDGELKIDEQRTDSKLGENVKFMKDRKK 180
           DGERG ESQG LK N+KKGT LGSET+E+S  FD           SKLGENVK MK+RKK
Sbjct: 121 DGERGFESQGGLKDNRKKGTALGSETSEKSRGFD----------RSKLGENVKLMKERKK 180

Query: 181 RKRDELEREYEAKKYGVAEVAEDEGEGSGGNVVGKKRKALDDPSEMMVTKEGFDDESKLL 240
           RKRDELEREYEAKKYGV++VAEDE EGSGGNVVGKKRKALDDPSEM+VTKEGFDDESKLL
Sbjct: 181 RKRDELEREYEAKKYGVSDVAEDEVEGSGGNVVGKKRKALDDPSEMLVTKEGFDDESKLL 240

Query: 241 RTVFVGNLPLKVKKKALAKEFSQFGEIESVRIRSVPIDIANSKKPRKGAILSKKLNEAAD 300
           RTVFVGNLPLKVKKKALAKEFSQFGEI+SVRIRSVPIDIANSKKPRKGAI+SKKLNEAAD
Sbjct: 241 RTVFVGNLPLKVKKKALAKEFSQFGEIDSVRIRSVPIDIANSKKPRKGAIISKKLNEAAD 300

Query: 301 SSHAYVVFKTEESAQASLSHNMAVFAGNHIRVDRACPPHKKLKVGNGPIYDPKRTVFVGN 360
           SSHAYVVFKTEESAQASLSHNMAVFAGNHIRVDRACPPHKKLKVGNGPIYDPKRTVFVGN
Sbjct: 301 SSHAYVVFKTEESAQASLSHNMAVFAGNHIRVDRACPPHKKLKVGNGPIYDPKRTVFVGN 360

Query: 361 LPFDVKDEELYQLFCGIGNMGSNVEAIRVIRDPKVNVGKGFAYVFFKTREAANSVVDNQK 420
           LPFDVKDEELYQLFCGI  MGS+VEA+RVIRDPKVNVGKGFAYVFFKTREA NSVV+NQK
Sbjct: 361 LPFDVKDEELYQLFCGIDTMGSSVEAVRVIRDPKVNVGKGFAYVFFKTREAVNSVVNNQK 420

Query: 421 LELHGRKLRLFHAKRNLASTPLKKRNRPHTEADRTPVKKNAGDSGLGTPDSSKGVTPKAA 480
           LEL GR LRLFHAK N  STP KKRNRP TEAD TP KKNA DSGLGTPDSSK VTPKA 
Sbjct: 421 LELRGRTLRLFHAKTNPTSTPFKKRNRPPTEADHTPAKKNAVDSGLGTPDSSKRVTPKAT 480

Query: 481 VASYQGLRASKSGSQKKIHTKGSSTKWLKSHSNSKEKPIDH-KRKRPEKTSERKAKRPAV 540
            ASYQGLRASKSGSQKKIHTKGSSTKW KSHSNSKEKPIDH KRK PEKTSERK KRPAV
Sbjct: 481 NASYQGLRASKSGSQKKIHTKGSSTKWPKSHSNSKEKPIDHKKRKGPEKTSERKGKRPAV 540

Query: 541 ANRKAAVKATKKGIAAPKQAGVKRKSDSRTPGSSHRNKRVKRFR 582
           ANRKA   ATK GIA PKQAG+KRKSDSR+PGSSHRNKRVK+FR
Sbjct: 541 ANRKAVANATKNGIATPKQAGLKRKSDSRSPGSSHRNKRVKKFR 565

[Close]

BLAST of CcUC10G187420 vs. ExPASy TrEMBL
Match: A0A0A0L184 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G009460 PE=4 SV=1)

HSP 1 Score: 862.4 bits (2227), Expect = 1.0e-246
Identity = 478/585 (81.71%), Postives = 506/585 (86.50%), Query Frame = 0


Query: 1   MGKKKTTDPINDPDESATVSAPFSVFETLFGRAGVENPGVSIFSNDNPFRRKDSDSIPAP 60
           MG  K TDP N  +E+ TV++ FSVF+TLFG AGVENP VSIFS DNPFRRK SDS+P P
Sbjct: 1   MGNNKITDPKNPSEETPTVASTFSVFDTLFGSAGVENPPVSIFSTDNPFRRKASDSVPPP 60

Query: 61  AEKSPNTCSDGKGRKKGKEKRVGTDLDSAEEAVKSSSEIKKFKRKEKTR--DPELDNVDD 120
             +          RKKGK+KRVG DLDS  E VK+SSEIKK K+KEK +  D ELDNVDD
Sbjct: 61  PAEI--------SRKKGKDKRVGIDLDST-EGVKTSSEIKKSKKKEKKKSLDRELDNVDD 120

Query: 121 DGERGSESQGVLK-KNKKKGTVLGSETTERSPEFDGELKIDEQRTDSKLGENVKFMKDRK 180
           DGERG ESQG LK  +KKKGTVLGSET+E+S  F+G          SKLGENVK MK+RK
Sbjct: 121 DGERGFESQGGLKDSSKKKGTVLGSETSEKSHGFEG----------SKLGENVKLMKERK 180

Query: 181 KRKRDELEREYEAKKYGVAEVAEDEGEGSGGNVVGKKRKALDDPSEMMVTKEGFDDESKL 240
           KRKRDELEREYEAKKYGV++VAEDE EGSGGNVVGKKRKALDDPSEM+VTKEGFDDESKL
Sbjct: 181 KRKRDELEREYEAKKYGVSDVAEDEVEGSGGNVVGKKRKALDDPSEMLVTKEGFDDESKL 240

Query: 241 LRTVFVGNLPLKVKKKALAKEFSQFGEIESVRIRSVPIDIANSKKPRKGAILSKKLNEAA 300
           LRTVFVGNLPLKVKKKALAKEFSQFGEI+SVRIRSVPIDIANSKKPRKGAI+SKKLNEAA
Sbjct: 241 LRTVFVGNLPLKVKKKALAKEFSQFGEIDSVRIRSVPIDIANSKKPRKGAIISKKLNEAA 300

Query: 301 DSSHAYVVFKTEESAQASLSHNMAVFAGNHIRVDRACPPHKKLKVGNGPIYDPKRTVFVG 360
           DSSHAYVVFKTEESAQASLSHNMAVFAGNHIRVDRACPPHKKLKVGNGPIYDPKRTVFVG
Sbjct: 301 DSSHAYVVFKTEESAQASLSHNMAVFAGNHIRVDRACPPHKKLKVGNGPIYDPKRTVFVG 360

Query: 361 NLPFDVKDEELYQLFCGIGNMGSNVEAIRVIRDPKVNVGKGFAYVFFKTREAANSVVDNQ 420
           NLPFDVKDEELYQLFCGI NMGS+VEA+RVIRDPKVNVGKGFAYVFFKTREAANSVV+NQ
Sbjct: 361 NLPFDVKDEELYQLFCGIDNMGSSVEAVRVIRDPKVNVGKGFAYVFFKTREAANSVVNNQ 420

Query: 421 KLELHGRKLRLFHAKRNLASTPLKKRNRPHTEADRTPVKKNAGDSGLGTPDSSKGVTPKA 480
            LEL GR LRLFH K N  STP KKRNRP TEADRTP KK   DSGLGTPDSSK VTPKA
Sbjct: 421 LLELRGRTLRLFHTKTNPTSTPFKKRNRPPTEADRTPAKKKYVDSGLGTPDSSKRVTPKA 480

Query: 481 AVASYQGLRASKSGSQKKIHTKGSSTKWLKSHSNSKEKPIDHKRKR-PEKTSERKAKRPA 540
              SYQGLRASKSGSQKKIHTKGSSTKW KSHSNSKEKPIDHK++R PEKTSERK KRPA
Sbjct: 481 TNVSYQGLRASKSGSQKKIHTKGSSTKWPKSHSNSKEKPIDHKKRRGPEKTSERKGKRPA 540

Query: 541 VANRKAAVKATKKGIAAPKQAGVKRKSDSRTPGSSHRNKRVKRFR 582
           VANRKA   ATK GIA PKQ G+KRKSDSR+PGSSHRNKRVKRFR
Sbjct: 541 VANRKAVAMATKNGIATPKQTGLKRKSDSRSPGSSHRNKRVKRFR 566

[Close]

BLAST of CcUC10G187420 vs. ExPASy TrEMBL
Match: B7SHL1 (Putative RNA recognition motif-containing protein OS=Cucumis sativus OX=3659 PE=2 SV=1)

HSP 1 Score: 859.8 bits (2220), Expect = 6.8e-246
Identity = 477/585 (81.54%), Postives = 505/585 (86.32%), Query Frame = 0


Query: 1   MGKKKTTDPINDPDESATVSAPFSVFETLFGRAGVENPGVSIFSNDNPFRRKDSDSIPAP 60
           MG  K TDP N  +E+ TV++ FSVF+TLFG AGVENP VSIFS DNPFRRK SDS+P P
Sbjct: 1   MGNNKITDPKNPSEETPTVASTFSVFDTLFGSAGVENPPVSIFSTDNPFRRKASDSVPPP 60

Query: 61  AEKSPNTCSDGKGRKKGKEKRVGTDLDSAEEAVKSSSEIKKFKRKEKTR--DPELDNVDD 120
             +          RKKGK+KRVG DLDS  E VK+SSEIKK K+KEK +  D ELDNVDD
Sbjct: 61  PAEI--------SRKKGKDKRVGIDLDST-EGVKTSSEIKKSKKKEKKKSLDRELDNVDD 120

Query: 121 DGERGSESQGVLK-KNKKKGTVLGSETTERSPEFDGELKIDEQRTDSKLGENVKFMKDRK 180
           DGERG ESQG LK  +KKKGTVLGSET+E+S  F+G          SKLGENVK MK+RK
Sbjct: 121 DGERGFESQGGLKDSSKKKGTVLGSETSEKSHGFEG----------SKLGENVKLMKERK 180

Query: 181 KRKRDELEREYEAKKYGVAEVAEDEGEGSGGNVVGKKRKALDDPSEMMVTKEGFDDESKL 240
           KRKRDELEREYEAKKYGV++VAEDE EGSGGNVVGKKRKALDDPSEM+VTKEGFDDESKL
Sbjct: 181 KRKRDELEREYEAKKYGVSDVAEDEVEGSGGNVVGKKRKALDDPSEMLVTKEGFDDESKL 240

Query: 241 LRTVFVGNLPLKVKKKALAKEFSQFGEIESVRIRSVPIDIANSKKPRKGAILSKKLNEAA 300
           LRTVFVGNLPLKVKKKALAKEFSQFGEI+SVRIRSVPIDIANSKKPRKGAI+SKKLNEAA
Sbjct: 241 LRTVFVGNLPLKVKKKALAKEFSQFGEIDSVRIRSVPIDIANSKKPRKGAIISKKLNEAA 300

Query: 301 DSSHAYVVFKTEESAQASLSHNMAVFAGNHIRVDRACPPHKKLKVGNGPIYDPKRTVFVG 360
           DSSHAYVVFKTEESA ASLSHNMAVFAGNHIRVDRACPPHKKLKVGNGPIYDPKRTVFVG
Sbjct: 301 DSSHAYVVFKTEESAWASLSHNMAVFAGNHIRVDRACPPHKKLKVGNGPIYDPKRTVFVG 360

Query: 361 NLPFDVKDEELYQLFCGIGNMGSNVEAIRVIRDPKVNVGKGFAYVFFKTREAANSVVDNQ 420
           NLPFDVKDEELYQLFCGI NMGS+VEA+RVIRDPKVNVGKGFAYVFFKTREAANSVV+NQ
Sbjct: 361 NLPFDVKDEELYQLFCGIDNMGSSVEAVRVIRDPKVNVGKGFAYVFFKTREAANSVVNNQ 420

Query: 421 KLELHGRKLRLFHAKRNLASTPLKKRNRPHTEADRTPVKKNAGDSGLGTPDSSKGVTPKA 480
            LEL GR LRLFH K N  STP KKRNRP TEADRTP KK   DSGLGTPDSSK VTPKA
Sbjct: 421 LLELRGRTLRLFHTKTNPTSTPFKKRNRPPTEADRTPAKKKYVDSGLGTPDSSKRVTPKA 480

Query: 481 AVASYQGLRASKSGSQKKIHTKGSSTKWLKSHSNSKEKPIDHKRKR-PEKTSERKAKRPA 540
              SYQGLRASKSGSQKKIHTKGSSTKW KSHSNSKEKPIDHK++R PEKTSERK KRPA
Sbjct: 481 TNVSYQGLRASKSGSQKKIHTKGSSTKWPKSHSNSKEKPIDHKKRRGPEKTSERKGKRPA 540

Query: 541 VANRKAAVKATKKGIAAPKQAGVKRKSDSRTPGSSHRNKRVKRFR 582
           VANRKA   ATK GIA PKQ G+KRKSDSR+PGSSHRNKRVKRFR
Sbjct: 541 VANRKAVAMATKNGIATPKQTGLKRKSDSRSPGSSHRNKRVKRFR 566

[Close]

BLAST of CcUC10G187420 vs. ExPASy TrEMBL
Match: A0A6J1E378 (nucleolar protein 12 OS=Cucurbita moschata OX=3662 GN=LOC111430358 PE=4 SV=1)

HSP 1 Score: 801.2 bits (2068), Expect = 2.9e-228
Identity = 456/607 (75.12%), Postives = 491/607 (80.89%), Query Frame = 0


Query: 1   MGKKKTTDPINDPDESATVSAPFSVFETLFGRAGVENPGVSIFSNDNPFRRKDSDSIP-- 60
           MGKKKT  P +  +E A  SAP SVFETLFG  G E+ GVSIFS DNPFRRKD+   P  
Sbjct: 1   MGKKKTNGPKSSSEEVAIGSAPSSVFETLFGNVGAESDGVSIFSTDNPFRRKDTSLTPVA 60

Query: 61  APAEKSP------NTCSDGKGRKKGKEKRVGTDLDSAEEAVKSSSEIKKFKRKEKTRDPE 120
           A AEKSP      +T  D K RKK KEKRVG DLDSAE  VKSSSE+KK KRKEK+RD E
Sbjct: 61  AVAEKSPSGGADDHTIDDVKSRKKSKEKRVGMDLDSAENGVKSSSEVKKSKRKEKSRDRE 120

Query: 121 LDN---VDDDGERGSESQGVLKKNKKKGTVLGSETTERSPEFDGELKIDEQRTDSKLGEN 180
           LDN     DD ERG +S+GV+KKNK+ G  +GS       EF GELKIDEQR+DSKLG +
Sbjct: 121 LDNEVIEKDDEERGFQSRGVVKKNKRNGAEIGS-------EFSGELKIDEQRSDSKLGVD 180

Query: 181 VKFMKDRKKRKRDELEREYEAKKYGVAEVAEDEGEGSGGNVVGKKRKALDDPSEMMVTKE 240
           VK  K++KKRKRDELEREYEAKKYG +EVAEDE EGSGG VVGKKRKA+DD SEM+VTKE
Sbjct: 181 VKLTKEKKKRKRDELEREYEAKKYGASEVAEDEVEGSGGTVVGKKRKAMDDFSEMLVTKE 240

Query: 241 GFDDESKLLRTVFVGNLPLKVKKKALAKEFSQFGEIESVRIRSVPIDIANSKKPRKGAIL 300
           GFDDESKLLRTVFVGNLPLKVKKKAL KEFSQFGEIESVRIRSVP  +ANSKKPRKGAIL
Sbjct: 241 GFDDESKLLRTVFVGNLPLKVKKKALGKEFSQFGEIESVRIRSVP--LANSKKPRKGAIL 300

Query: 301 SKKLNEAADSSHAYVVFKTEESAQASLSHNMAVFAGNHIRVDRACPPHKKLKVGNGPIYD 360
           SKK+NE ADSSHAYVVFKTEESAQASLSHNMAVFAGNHIRVDRACPP KKLKVG+ PIYD
Sbjct: 301 SKKVNEDADSSHAYVVFKTEESAQASLSHNMAVFAGNHIRVDRACPPRKKLKVGSSPIYD 360

Query: 361 PKRTVFVGNLPFDVKDEELYQLFCGIGNMGSNVEAIRVIRDPKVNVGKGFAYVFFKTREA 420
           PKRTVFVGNLPFDVKDEELYQLFCGI N+GS+VEA+RVIRDP VN+GKGFAYVFFKT+EA
Sbjct: 361 PKRTVFVGNLPFDVKDEELYQLFCGIENVGSSVEAVRVIRDPNVNIGKGFAYVFFKTKEA 420

Query: 421 ANSVVDNQKLELHGRKLRLFHAKRNLASTPLKKRNRPHTEADRTPVKKNAGDSGLGTPDS 480
           ANSV++NQKL+L  R LRLFHAK NL STPLKKRN P TE DR+  KK A DSGL TPDS
Sbjct: 421 ANSVINNQKLQLRDRALRLFHAKPNLTSTPLKKRNNPSTEVDRS-AKKRAVDSGLRTPDS 480

Query: 481 SKGVTPKAAVASYQGLRASKSGSQKKIHTKGSSTKWLKSHSNSKEKPIDHKR-------- 540
           SK VTPKA VASYQGLRASK GSQKK   KGS TKW KSHSNSKEK + HKR        
Sbjct: 481 SKRVTPKATVASYQGLRASKPGSQKKNQAKGSGTKWTKSHSNSKEKRVAHKRRRPEDFPE 540

Query: 541 -------KRPEKTSERKAKRPAVANRKAAVKATKKGIAAPKQAGVKRKSDSRTPGSSHRN 582
                  KRPEK SERK KRPAVANRKA   A++ G+AAPKQ GVKRKSDSRTP SSHRN
Sbjct: 541 RTSERKGKRPEKMSERKGKRPAVANRKAVANASRNGVAAPKQGGVKRKSDSRTPESSHRN 597

[Close]

BLAST of CcUC10G187420 vs. TAIR 10
Match: AT5G46840.1 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 368.2 bits (944), Expect = 1.2e-101
Identity = 272/592 (45.95%), Postives = 346/592 (58.45%), Query Frame = 0


Query: 1   MGKKKT--TDPINDPDESATVSAPFSVFETLFGRAGVENPG-VSIFSNDNPFRRKDSDSI 60
           MGKKK+  T+P +  DES T      +F TLF    VE+ G  S+FS DNPFRRK    I
Sbjct: 1   MGKKKSKVTEPESQNDESQT------IFSTLFS-GEVESSGFASLFSADNPFRRKQPQEI 60

Query: 61  PAPAEKSPNTCSDGKGRKKGKEKRVGTDLDSAEEAVKSSSEIKKFKRKEKTRDPELDNVD 120
                K  +   + KG K+  E       +  EE      + KK K+++K        + 
Sbjct: 61  -----KESSIPDEKKGDKRNAEN------EEEEEETDLPVKTKKSKKEKK--------LT 120

Query: 121 DDGERGSESQGVLKKNKKKGTVLGSETTERSPEFDGELKIDEQRTDSKLGENVKFMKDRK 180
           D G                                     DE+ T S+  E    +  RK
Sbjct: 121 DSG-------------------------------------DEKETISEAVEESGLVSKRK 180

Query: 181 KRKRDELEREYEAKKYGVAEVAEDEGEGSGGNVVGKKRKALDDPSEMMVTKEGFDDESKL 240
           KRKRDE+E EYE KKYG  E+ E +        VG+KRK  D+ ++ MV+KEGFDDESKL
Sbjct: 181 KRKRDEIENEYETKKYGSVEMKEKK--------VGEKRKKADEVADTMVSKEGFDDESKL 240

Query: 241 LRTVFVGNLPLKVKKKALAKEFSQFGEIESVRIRSVPIDIANSKKPRKGAILSKKLNEAA 300
           LRTVFVGNLPLKVKKK + KEFS+FGE+ESVRIRSVP  I +SK+ RKGAI+ K++NE A
Sbjct: 241 LRTVFVGNLPLKVKKKVILKEFSKFGEVESVRIRSVP--IVDSKRTRKGAIMLKQINEKA 300

Query: 301 DSSHAYVVFKTEESAQASLSHNMAVFAGNHIRVDRACPPHKKLKVGNGP-IYDPKRTVFV 360
            S HAYVVF+TE+SA ASL+HNM++  GNH+RVDRACPP KK K  +   +YDPKRTVF+
Sbjct: 301 SSVHAYVVFETEQSAAASLAHNMSLIDGNHVRVDRACPPRKKQKGHDDTHLYDPKRTVFM 360

Query: 361 GNLPFDVKDEELYQLFCGIGNMGSNVEAIRVIRDPKVNVGKGFAYVFFKTREAANSVVDN 420
           GNLPFDVKDEE+YQLF G  N+ +++EA+RVIRDP +N+GKG AYV FKTREAAN V+  
Sbjct: 361 GNLPFDVKDEEVYQLFTGKSNLENSIEAVRVIRDPHLNIGKGIAYVLFKTREAANLVLKK 420

Query: 421 QKLELHGRKLRLFHAKRNLASTPLKKRNRPHTEADRTPVKKNAGDSGLGTPDSSKGVTPK 480
             L+L  R+LR+   K     TP K+++ P +EA  +P +K      + TP      TP 
Sbjct: 421 GYLKLRERELRISRVK---PDTPSKRKSNP-SEA-YSPAQKRLQKDKVVTP------TPT 480

Query: 481 A-AVASYQGLRASKSGSQKKIHTKGSSTKWLKSHSNSKEKP-----IDHKRKRPEKTS-E 540
             A  SYQG+RASKSG  KK       T + KS + +K +P      D+K+      S E
Sbjct: 481 GKANLSYQGVRASKSGDDKK-------TPYQKSSAQTKMRPRGSSSNDNKKSGNNSASKE 501

Query: 541 RKAKRPAVANRKAAVKAT-KKGIAAPKQAGVKRKSDSRTPGSSHRNKRVKRF 581
           R  KRPAVA RKA   A   K     + AG KRK ++RTP S  + K+ KRF
Sbjct: 541 RSQKRPAVAARKAKANAKGSKESGGKRFAGTKRKQENRTPESFSKKKKTKRF 501

[Close]

BLAST of CcUC10G187420 vs. TAIR 10
Match: AT5G46840.2 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 329.3 bits (843), Expect = 6.1e-90
Identity = 207/379 (54.62%), Postives = 260/379 (68.60%), Query Frame = 0


Query: 211 VGKKRKALDDPSEMMVTKEGFDDESKLLRTVFVGNLPLKVKKKALAKEFSQFGEIESVRI 270
           VG+KRK  D+ ++ MV+KEGFDDESKLLRTVFVGNLPLKVKKK + KEFS+FGE+ESVRI
Sbjct: 6   VGEKRKKADEVADTMVSKEGFDDESKLLRTVFVGNLPLKVKKKVILKEFSKFGEVESVRI 65

Query: 271 RSVPIDIANSKKPRKGAILSKKLNEAADSSHAYVVFKTEESAQASLSHNMAVFAGNHIRV 330
           RSVP  I +SK+ RKGAI+ K++NE A S HAYVVF+TE+SA ASL+HNM++  GNH+RV
Sbjct: 66  RSVP--IVDSKRTRKGAIMLKQINEKASSVHAYVVFETEQSAAASLAHNMSLIDGNHVRV 125

Query: 331 DRACPPHKKLKVGNGP-IYDPKRTVFVGNLPFDVKDEELYQLFCGIGNMGSNVEAIRVIR 390
           DRACPP KK K  +   +YDPKRTVF+GNLPFDVKDEE+YQLF G  N+ +++EA+RVIR
Sbjct: 126 DRACPPRKKQKGHDDTHLYDPKRTVFMGNLPFDVKDEEVYQLFTGKSNLENSIEAVRVIR 185

Query: 391 DPKVNVGKGFAYVFFKTREAANSVVDNQKLELHGRKLRLFHAKRNLASTPLKKRNRPHTE 450
           DP +N+GKG AYV FKTREAAN V+    L+L  R+LR+   K     TP K+++ P +E
Sbjct: 186 DPHLNIGKGIAYVLFKTREAANLVLKKGYLKLRERELRISRVK---PDTPSKRKSNP-SE 245

Query: 451 ADRTPVKKNAGDSGLGTPDSSKGVTPKA-AVASYQGLRASKSGSQKKIHTKGSSTKWLKS 510
           A  +P +K      + TP      TP   A  SYQG+RASKSG  KK       T + KS
Sbjct: 246 A-YSPAQKRLQKDKVVTP------TPTGKANLSYQGVRASKSGDDKK-------TPYQKS 305

Query: 511 HSNSKEKP-----IDHKRKRPEKTS-ERKAKRPAVANRKAAVKAT-KKGIAAPKQAGVKR 570
            + +K +P      D+K+      S ER  KRPAVA RKA   A   K     + AG KR
Sbjct: 306 SAQTKMRPRGSSSNDNKKSGNNSASKERSQKRPAVAARKAKANAKGSKESGGKRFAGTKR 364

Query: 571 KSDSRTPGSSHRNKRVKRF 581
           K ++RTP S  + K+ KRF
Sbjct: 366 KQENRTPESFSKKKKTKRF 364

[Close]

BLAST of CcUC10G187420 vs. TAIR 10
Match: AT2G18510.1 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 66.2 bits (160), Expect = 9.7e-11
Identity = 63/253 (24.90%), Postives = 116/253 (45.85%), Query Frame = 0


Query: 240 TVFVGNLPLKVKKKALAKEFSQFGEIESVRIRSVPIDIANSKKPRKGAILSKKLNEAADS 299
           TV+VG L  ++ ++ L + F Q G + +V    VP D   +                   
Sbjct: 26  TVYVGGLDAQLSEELLWELFVQAGPVVNV---YVPKDRVTN----------------LHQ 85

Query: 300 SHAYVVFKTEESAQASLS-HNMAVFAGNHIRVDRACPPHKKLKVGNGPIYDPKRTVFVGN 359
           ++ ++ +++EE A  ++   NM    G  IRV++A    K L VG          +F+GN
Sbjct: 86  NYGFIEYRSEEDADYAIKVLNMIKLHGKPIRVNKASQDKKSLDVG--------ANLFIGN 145

Query: 360 LPFDVKDEELYQLFCGIGNMGSNVEAIRVIRDPKVNVGKGFAYVFFKTREAANSVVDNQK 419
           L  DV ++ LY  F   G + SN    +++RDP     +GF ++ + + EA+++ +++  
Sbjct: 146 LDPDVDEKLLYDTFSAFGVIASNP---KIMRDPDTGNSRGFGFISYDSFEASDAAIESMT 205

Query: 420 LE-LHGRKLRLFH--------------AKRNLAST-PLKKRNRPHTEADRTPVKKNAGDS 476
            + L  R++ + +              A+R LA+T P  +++RPHT     P       +
Sbjct: 206 GQYLSNRQITVSYAYKKDTKGERHGTPAERLLAATNPTAQKSRPHTLFAMGPPSSAPQVN 248

[Close]

BLAST of CcUC10G187420 vs. TAIR 10
Match: AT4G24770.1 (31-kDa RNA binding protein )

HSP 1 Score: 65.9 bits (159), Expect = 1.3e-10
Identity = 73/251 (29.08%), Postives = 107/251 (42.63%), Query Frame = 0


Query: 185 EREYEAKKYGVAEVAEDEGEGSGGNVVGKKRKALDDPSEMMVTKEGFDDESKLLRTVFVG 244
           E E   +   V+E  E EG+ S G+ V +  ++  D SE  V++     E      +FVG
Sbjct: 97  ETENSLESQDVSEGDESEGDASEGD-VSEGDESEGDVSEGAVSERAEFPEPSEEAKLFVG 156

Query: 245 NLPLKVKKKALAKEFSQFGEIESVRIRSVPIDIANSKKPRKGAILSKKLNEAADSSHAY- 304
           NL   V  +ALA  F Q G +E                     I     N   D S  + 
Sbjct: 157 NLAYDVNSQALAMLFEQAGTVE---------------------IAEVIYNRETDQSRGFG 216

Query: 305 --VVFKTEESAQASLSHNMAVFAGNHIRVDRACPPHKKLKVGNGP-IYDPKRTVFVGNLP 364
              +   +E+  A    N     G  + V++A P  +  +    P +Y+P   V+VGNLP
Sbjct: 217 FVTMSSVDEAETAVEKFNRYDLNGRLLTVNKAAP--RGSRPERAPRVYEPAFRVYVGNLP 276

Query: 365 FDVKDEELYQLFCGIGNMGSNVEAIRVIRDPKVNVGKGFAYVFFKTREAAN---SVVDNQ 424
           +DV +  L QLF      G  VEA RV+ D +    +GF +V     +  N   S +D Q
Sbjct: 277 WDVDNGRLEQLF---SEHGKVVEA-RVVYDRETGRSRGFGFVTMSDVDELNEAISALDGQ 317

Query: 425 KLELHGRKLRL 429
            LE  GR +R+
Sbjct: 337 NLE--GRAIRV 317

[Close]

BLAST of CcUC10G187420 vs. TAIR 10
Match: AT5G50250.1 (chloroplast RNA-binding protein 31B )

HSP 1 Score: 58.9 bits (141), Expect = 1.5e-08
Identity = 66/238 (27.73%), Postives = 98/238 (41.18%), Query Frame = 0


Query: 201 DEGEGSGGNVVGKKRKALDDPSEMMVTKEGFDDESKLLRTVFVGNLPLKVKKKALAKEFS 260
           +E EG  G++ G       D S       GF +  +  + +FVGNLP  V  +ALA  F 
Sbjct: 78  EEEEGEDGSIGG--TSVTVDESFESEDGVGFPEPPEEAK-LFVGNLPYDVDSQALAMLFE 137

Query: 261 QFGEIESVRIRSVPIDIANSKKPRKGAILSKKLNEAADSSHAY---VVFKTEESAQASLS 320
           Q G +E                     I     N   D S  +    +   EE+ +A   
Sbjct: 138 QAGTVE---------------------ISEVIYNRDTDQSRGFGFVTMSTVEEAEKAVEK 197

Query: 321 HNMAVFAGNHIRVDRACP----PHKKLKVGNGPIYDPKRTVFVGNLPFDVKDEELYQLFC 380
            N     G  + V+RA P    P ++ +V     YD    ++VGNLP+DV    L +LF 
Sbjct: 198 FNSFEVNGRRLTVNRAAPRGSRPERQPRV-----YDAAFRIYVGNLPWDVDSGRLERLF- 257

Query: 381 GIGNMGSNVEAIRVIRDPKVNVGKGFAYVFFKTREAAN---SVVDNQKLELHGRKLRL 429
                G  V+A RV+ D +    +GF +V        N   + +D Q LE  GR +++
Sbjct: 258 --SEHGKVVDA-RVVSDRETGRSRGFGFVQMSNENEVNVAIAALDGQNLE--GRAIKV 280

The following BLAST results are available for this feature:

BLAST of CcUC10G187420 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038905328.1	1.2e-276	88.46	nucleolar protein 12 [Benincasa hispida]	[more]
KAA0053031.1	6.5e-251	83.22	nucleolar protein 12 [Cucumis melo var. makuwa] >TYK11486.1 nucleolar protein 12...	[more]
XP_008448668.1	1.1e-250	83.05	PREDICTED: nucleolar protein 12 [Cucumis melo]	[more]
KGN55740.1	2.2e-246	81.71	hypothetical protein Csa_010366 [Cucumis sativus]	[more]
NP_001267538.1	1.4e-245	81.54	uncharacterized LOC101206555 [Cucumis sativus] >ACA50448.1 putative RNA recognit...	[more]

BLAST of CcUC10G187420 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O13741	4.8e-31	32.32	Nucleolar protein 12 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=2...	[more]
Q5M9F1	3.9e-25	33.53	RNA-binding protein 34 OS=Rattus norvegicus OX=10116 GN=Rbm34 PE=1 SV=1	[more]
Q5AHI7	2.2e-23	30.26	Nucleolar protein 12 OS=Candida albicans (strain SC5314 / ATCC MYA-2876) OX=2375...	[more]
Q6BTS9	1.1e-22	28.83	Nucleolar protein 12 OS=Debaryomyces hansenii (strain ATCC 36239 / CBS 767 / BCR...	[more]
Q6C2Q7	9.1e-22	29.94	Nucleolar protein 12 OS=Yarrowia lipolytica (strain CLIB 122 / E 150) OX=284591 ...	[more]

BLAST of CcUC10G187420 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7UHL8	3.1e-251	83.22	Nucleolar protein 12 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold139...	[more]
A0A1S3BK91	5.3e-251	83.05	nucleolar protein 12 OS=Cucumis melo OX=3656 GN=LOC103490769 PE=4 SV=1	[more]
A0A0A0L184	1.0e-246	81.71	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G009460 PE=4 SV=1	[more]
B7SHL1	6.8e-246	81.54	Putative RNA recognition motif-containing protein OS=Cucumis sativus OX=3659 PE=...	[more]
A0A6J1E378	2.9e-228	75.12	nucleolar protein 12 OS=Cucurbita moschata OX=3662 GN=LOC111430358 PE=4 SV=1	[more]

BLAST of CcUC10G187420 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G46840.1	1.2e-101	45.95	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]
AT5G46840.2	6.1e-90	54.62	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]
AT2G18510.1	9.7e-11	24.90	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]
AT4G24770.1	1.3e-10	29.08	31-kDa RNA binding protein	[more]
AT5G50250.1	1.5e-08	27.73	chloroplast RNA-binding protein 31B	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000504	RNA recognition motif domain	SMART	SM00360	rrm1_1	coord: 240..331 e-value: 1.8E-9 score: 47.5 coord: 353..429 e-value: 4.0E-17 score: 72.9
IPR000504	RNA recognition motif domain	PFAM	PF00076	RRM_1	coord: 354..426 e-value: 2.8E-11 score: 43.1 coord: 241..273 e-value: 8.5E-6 score: 25.5
IPR000504	RNA recognition motif domain	PROSITE	PS50102	RRM	coord: 239..335 score: 13.140219
IPR000504	RNA recognition motif domain	PROSITE	PS50102	RRM	coord: 352..433 score: 16.687742
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	GENE3D	3.30.70.330		coord: 347..438 e-value: 8.7E-21 score: 75.9
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	GENE3D	3.30.70.330		coord: 236..340 e-value: 4.5E-18 score: 67.2
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 36..169
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 432..581
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 68..169
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 508..536
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..20
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 442..456
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 485..507
None	No IPR available	PANTHER	PTHR23236:SF25	RNA-BINDING PROTEIN 34	coord: 45..579
None	No IPR available	PANTHER	PTHR23236	EUKARYOTIC TRANSLATION INITIATION FACTOR 4B/4H	coord: 45..579
IPR034220	RBM34, RNA recognition motif 1	CDD	cd12394	RRM1_RBM34	coord: 239..331 e-value: 2.86495E-32 score: 117.361
IPR035979	RNA-binding domain superfamily	SUPERFAMILY	54928	RNA-binding domain, RBD	coord: 347..443
IPR035979	RNA-binding domain superfamily	SUPERFAMILY	54928	RNA-binding domain, RBD	coord: 239..346

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CcUC10G187420.1	CcUC10G187420.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0003723	RNA binding
molecular_function	GO:0003676	nucleic acid binding