CcUC06G120520 (gene) Watermelon (PI 537277) v1

Overview


Name	CcUC06G120520
Type	gene
Organism	Citrullus colocynthis (Watermelon (PI 537277) v1)
Description	Unknown protein
Location	CicolChr06: 22288586 .. 22288966 (+)
RNA-Seq Expression	CcUC06G120520
Synteny	CcUC06G120520

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCCACTAATCTCCTCACTTTTGCCCCTGCCGGCATCCGTGCCTGTGCCGCCTCCGCCGACCGAAGATCCGACCATAACCGCCGGAAAACCTCCTCCTCTTCCAACTGGTGGGCCCCAGTCTTTGGCTGGTCCTCCGAACCCGACTATATCGACTCCGGCAACAAGGCCGAACCTCAAGACCTCACCGGCGGTACTTCAAAATCGGATGTGGAGACGAAATCCGTTAGGGCTCGATTTTCACCCGGCTGCTTCACGGAGGCGAAGGCTCGGCAGCTGCGCATGATGACGACGAAGACGGAGTCATTTCACGACGTTATGTACCACTCGGCGATCGCTTCTCGCCTCGCTTCCGACTTCAAAACTCACGCCGATTCCTGA

mRNA sequence

ATGGCCACTAATCTCCTCACTTTTGCCCCTGCCGGCATCCGTGCCTGTGCCGCCTCCGCCGACCGAAGATCCGACCATAACCGCCGGAAAACCTCCTCCTCTTCCAACTGGTGGGCCCCAGTCTTTGGCTGGTCCTCCGAACCCGACTATATCGACTCCGGCAACAAGGCCGAACCTCAAGACCTCACCGGCGGTACTTCAAAATCGGATGTGGAGACGAAATCCGTTAGGGCTCGATTTTCACCCGGCTGCTTCACGGAGGCGAAGGCTCGGCAGCTGCGCATGATGACGACGAAGACGGAGTCATTTCACGACGTTATGTACCACTCGGCGATCGCTTCTCGCCTCGCTTCCGACTTCAAAACTCACGCCGATTCCTGA

Coding sequence (CDS)

ATGGCCACTAATCTCCTCACTTTTGCCCCTGCCGGCATCCGTGCCTGTGCCGCCTCCGCCGACCGAAGATCCGACCATAACCGCCGGAAAACCTCCTCCTCTTCCAACTGGTGGGCCCCAGTCTTTGGCTGGTCCTCCGAACCCGACTATATCGACTCCGGCAACAAGGCCGAACCTCAAGACCTCACCGGCGGTACTTCAAAATCGGATGTGGAGACGAAATCCGTTAGGGCTCGATTTTCACCCGGCTGCTTCACGGAGGCGAAGGCTCGGCAGCTGCGCATGATGACGACGAAGACGGAGTCATTTCACGACGTTATGTACCACTCGGCGATCGCTTCTCGCCTCGCTTCCGACTTCAAAACTCACGCCGATTCCTGA

Protein sequence

MATNLLTFAPAGIRACAASADRRSDHNRRKTSSSSNWWAPVFGWSSEPDYIDSGNKAEPQDLTGGTSKSDVETKSVRARFSPGCFTEAKARQLRMMTTKTESFHDVMYHSAIASRLASDFKTHADS

Homology

[Close]

BLAST of CcUC06G120520 vs. NCBI nr
Match: XP_038880363.1 (uncharacterized protein LOC120072011 [Benincasa hispida])

HSP 1 Score: 238.4 bits (607), Expect = 3.3e-59
Identity = 119/126 (94.44%), Postives = 120/126 (95.24%), Query Frame = 0


Query: 1   MATNLLTFAPAGIRACAASADRRSDHNRRKTSSSSNWWAPVFGWSSEPDYIDSGNKAEPQ 60
           MATNLLTF PAGIRACAASADRRSDHNRRKTSSSSNWWAPVFGWSSEPDYIDS NKAEPQ
Sbjct: 1   MATNLLTFPPAGIRACAASADRRSDHNRRKTSSSSNWWAPVFGWSSEPDYIDSANKAEPQ 60

Query: 61  DLTGGTSKSDVETKSVRARFSPGCFTEAKARQLRMMTTKTESFHDVMYHSAIASRLASDF 120
           DL GG SKSD ETKSVRARFSPGCFTEAKARQLRMMTT+TESFHDVMYHSAIASRLASDF
Sbjct: 61  DLAGGVSKSDPETKSVRARFSPGCFTEAKARQLRMMTTETESFHDVMYHSAIASRLASDF 120

Query: 121 KTHADS 127
           KT ADS
Sbjct: 121 KTRADS 126

[Close]

BLAST of CcUC06G120520 vs. NCBI nr
Match: XP_011656185.1 (uncharacterized protein LOC105435656 [Cucumis sativus] >KGN65295.1 hypothetical protein Csa_019984 [Cucumis sativus])

HSP 1 Score: 229.2 bits (583), Expect = 2.0e-56
Identity = 112/126 (88.89%), Postives = 120/126 (95.24%), Query Frame = 0


Query: 1   MATNLLTFAPAGIRACAASADRRSDHNRRKTSSSSNWWAPVFGWSSEPDYIDSGNKAEPQ 60
           MATNLLTF PAGIRACA+SADRRSDH+RRKTSSSSNWWAPVFGWSSEPDYIDSGNKAEPQ
Sbjct: 1   MATNLLTFPPAGIRACASSADRRSDHSRRKTSSSSNWWAPVFGWSSEPDYIDSGNKAEPQ 60

Query: 61  DLTGGTSKSDVETKSVRARFSPGCFTEAKARQLRMMTTKTESFHDVMYHSAIASRLASDF 120
           +L GG+SK D+ETKS+R RFSPGCFTEAKARQLRMMTT+TESFHDVMYHSAIASRLASDF
Sbjct: 61  NLAGGSSKPDLETKSLRGRFSPGCFTEAKARQLRMMTTETESFHDVMYHSAIASRLASDF 120

Query: 121 KTHADS 127
           K+  DS
Sbjct: 121 KSREDS 126

[Close]

BLAST of CcUC06G120520 vs. NCBI nr
Match: XP_016903293.1 (PREDICTED: uncharacterized protein LOC103502747 [Cucumis melo] >KAA0046733.1 uncharacterized protein E6C27_scaffold216G00140 [Cucumis melo var. makuwa] >TYK14510.1 uncharacterized protein E5676_scaffold15G00250 [Cucumis melo var. makuwa])

HSP 1 Score: 217.2 bits (552), Expect = 7.9e-53
Identity = 110/127 (86.61%), Postives = 115/127 (90.55%), Query Frame = 0


Query: 1   MATNLLTFAPAGIRACAASADRRSDHNRRKTSSSSNWWAPVFGWSSEPDYIDS-GNKAEP 60
           MATNLLTF PAGIRACAASADRRSD NRRK SSS+NWWAPVFGWSSEPDYIDS  NKAEP
Sbjct: 1   MATNLLTFTPAGIRACAASADRRSDLNRRKASSSTNWWAPVFGWSSEPDYIDSAANKAEP 60

Query: 61  QDLTGGTSKSDVETKSVRARFSPGCFTEAKARQLRMMTTKTESFHDVMYHSAIASRLASD 120
           Q+L G  SK D+ETKSVR RFSPGCFTEAKARQLRMMTT+TESFHDVMYHSAIASRLASD
Sbjct: 61  QNLAGAASKPDLETKSVRGRFSPGCFTEAKARQLRMMTTETESFHDVMYHSAIASRLASD 120

Query: 121 FKTHADS 127
           FK+  DS
Sbjct: 121 FKSRGDS 127

[Close]

BLAST of CcUC06G120520 vs. NCBI nr
Match: KAG6589876.1 (hypothetical protein SDJN03_15299, partial [Cucurbita argyrosperma subsp. sororia] >KAG7023547.1 hypothetical protein SDJN02_14573, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 195.3 bits (495), Expect = 3.2e-46
Identity = 100/129 (77.52%), Postives = 110/129 (85.27%), Query Frame = 0


Query: 1   MATNLLTFAPAGIRACAASADRRSDHNRRKT---SSSSNWWAPVFGWSSEPDYIDSGNKA 60
           MAT+L TFAP  IRACA+SA    DHNRRKT   SSSSNWWAPVFGWSSEPDYIDSGNK+
Sbjct: 1   MATSLFTFAPTSIRACASSA----DHNRRKTSSSSSSSNWWAPVFGWSSEPDYIDSGNKS 60

Query: 61  EPQDLTGGTSKSDVETKSVRARFSPGCFTEAKARQLRMMTTKTESFHDVMYHSAIASRLA 120
            P++L  G SKSD ETKS R RFSPGCFTE+KARQLR+MT +TESFHDVMYHSAIASRLA
Sbjct: 61  NPKNLADGVSKSDPETKSARNRFSPGCFTESKARQLRLMTMETESFHDVMYHSAIASRLA 120

Query: 121 SDFKTHADS 127
           +DFK+ ADS
Sbjct: 121 TDFKSRADS 125

[Close]

BLAST of CcUC06G120520 vs. NCBI nr
Match: XP_022960569.1 (uncharacterized protein LOC111461308 [Cucurbita moschata])

HSP 1 Score: 193.0 bits (489), Expect = 1.6e-45
Identity = 99/130 (76.15%), Postives = 109/130 (83.85%), Query Frame = 0


Query: 1   MATNLLTFAPAGIRACAASADRRSDHNRRK----TSSSSNWWAPVFGWSSEPDYIDSGNK 60
           MATNL TFAP  IRACA+SA    DHNRRK    +SSSSNWWAPVFGWSSEPDYIDSGNK
Sbjct: 1   MATNLFTFAPTSIRACASSA----DHNRRKASSSSSSSSNWWAPVFGWSSEPDYIDSGNK 60

Query: 61  AEPQDLTGGTSKSDVETKSVRARFSPGCFTEAKARQLRMMTTKTESFHDVMYHSAIASRL 120
           + P++L  G SKSD ETKS R RFSPGCFTE+KARQLR+MT +TESFHDVMYHSAIASRL
Sbjct: 61  SNPKNLADGVSKSDPETKSSRNRFSPGCFTESKARQLRLMTMETESFHDVMYHSAIASRL 120

Query: 121 ASDFKTHADS 127
           A+DFK+  DS
Sbjct: 121 ATDFKSRGDS 126

[Close]

BLAST of CcUC06G120520 vs. ExPASy TrEMBL
Match: A0A0A0LTN7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G303705 PE=4 SV=1)

HSP 1 Score: 229.2 bits (583), Expect = 9.7e-57
Identity = 112/126 (88.89%), Postives = 120/126 (95.24%), Query Frame = 0


Query: 1   MATNLLTFAPAGIRACAASADRRSDHNRRKTSSSSNWWAPVFGWSSEPDYIDSGNKAEPQ 60
           MATNLLTF PAGIRACA+SADRRSDH+RRKTSSSSNWWAPVFGWSSEPDYIDSGNKAEPQ
Sbjct: 1   MATNLLTFPPAGIRACASSADRRSDHSRRKTSSSSNWWAPVFGWSSEPDYIDSGNKAEPQ 60

Query: 61  DLTGGTSKSDVETKSVRARFSPGCFTEAKARQLRMMTTKTESFHDVMYHSAIASRLASDF 120
           +L GG+SK D+ETKS+R RFSPGCFTEAKARQLRMMTT+TESFHDVMYHSAIASRLASDF
Sbjct: 61  NLAGGSSKPDLETKSLRGRFSPGCFTEAKARQLRMMTTETESFHDVMYHSAIASRLASDF 120

Query: 121 KTHADS 127
           K+  DS
Sbjct: 121 KSREDS 126

[Close]

BLAST of CcUC06G120520 vs. ExPASy TrEMBL
Match: A0A5D3CSV6 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold15G00250 PE=4 SV=1)

HSP 1 Score: 217.2 bits (552), Expect = 3.8e-53
Identity = 110/127 (86.61%), Postives = 115/127 (90.55%), Query Frame = 0


Query: 1   MATNLLTFAPAGIRACAASADRRSDHNRRKTSSSSNWWAPVFGWSSEPDYIDS-GNKAEP 60
           MATNLLTF PAGIRACAASADRRSD NRRK SSS+NWWAPVFGWSSEPDYIDS  NKAEP
Sbjct: 1   MATNLLTFTPAGIRACAASADRRSDLNRRKASSSTNWWAPVFGWSSEPDYIDSAANKAEP 60

Query: 61  QDLTGGTSKSDVETKSVRARFSPGCFTEAKARQLRMMTTKTESFHDVMYHSAIASRLASD 120
           Q+L G  SK D+ETKSVR RFSPGCFTEAKARQLRMMTT+TESFHDVMYHSAIASRLASD
Sbjct: 61  QNLAGAASKPDLETKSVRGRFSPGCFTEAKARQLRMMTTETESFHDVMYHSAIASRLASD 120

Query: 121 FKTHADS 127
           FK+  DS
Sbjct: 121 FKSRGDS 127

[Close]

BLAST of CcUC06G120520 vs. ExPASy TrEMBL
Match: A0A1S4E4Y4 (uncharacterized protein LOC103502747 OS=Cucumis melo OX=3656 GN=LOC103502747 PE=4 SV=1)

HSP 1 Score: 217.2 bits (552), Expect = 3.8e-53
Identity = 110/127 (86.61%), Postives = 115/127 (90.55%), Query Frame = 0


Query: 1   MATNLLTFAPAGIRACAASADRRSDHNRRKTSSSSNWWAPVFGWSSEPDYIDS-GNKAEP 60
           MATNLLTF PAGIRACAASADRRSD NRRK SSS+NWWAPVFGWSSEPDYIDS  NKAEP
Sbjct: 1   MATNLLTFTPAGIRACAASADRRSDLNRRKASSSTNWWAPVFGWSSEPDYIDSAANKAEP 60

Query: 61  QDLTGGTSKSDVETKSVRARFSPGCFTEAKARQLRMMTTKTESFHDVMYHSAIASRLASD 120
           Q+L G  SK D+ETKSVR RFSPGCFTEAKARQLRMMTT+TESFHDVMYHSAIASRLASD
Sbjct: 61  QNLAGAASKPDLETKSVRGRFSPGCFTEAKARQLRMMTTETESFHDVMYHSAIASRLASD 120

Query: 121 FKTHADS 127
           FK+  DS
Sbjct: 121 FKSRGDS 127

[Close]

BLAST of CcUC06G120520 vs. ExPASy TrEMBL
Match: A0A6J1HBD8 (uncharacterized protein LOC111461308 OS=Cucurbita moschata OX=3662 GN=LOC111461308 PE=4 SV=1)

HSP 1 Score: 193.0 bits (489), Expect = 7.7e-46
Identity = 99/130 (76.15%), Postives = 109/130 (83.85%), Query Frame = 0


Query: 1   MATNLLTFAPAGIRACAASADRRSDHNRRK----TSSSSNWWAPVFGWSSEPDYIDSGNK 60
           MATNL TFAP  IRACA+SA    DHNRRK    +SSSSNWWAPVFGWSSEPDYIDSGNK
Sbjct: 1   MATNLFTFAPTSIRACASSA----DHNRRKASSSSSSSSNWWAPVFGWSSEPDYIDSGNK 60

Query: 61  AEPQDLTGGTSKSDVETKSVRARFSPGCFTEAKARQLRMMTTKTESFHDVMYHSAIASRL 120
           + P++L  G SKSD ETKS R RFSPGCFTE+KARQLR+MT +TESFHDVMYHSAIASRL
Sbjct: 61  SNPKNLADGVSKSDPETKSSRNRFSPGCFTESKARQLRLMTMETESFHDVMYHSAIASRL 120

Query: 121 ASDFKTHADS 127
           A+DFK+  DS
Sbjct: 121 ATDFKSRGDS 126

[Close]

BLAST of CcUC06G120520 vs. ExPASy TrEMBL
Match: A0A6J1JBM9 (uncharacterized protein LOC111485309 OS=Cucurbita maxima OX=3661 GN=LOC111485309 PE=4 SV=1)

HSP 1 Score: 190.7 bits (483), Expect = 3.8e-45
Identity = 98/127 (77.17%), Postives = 106/127 (83.46%), Query Frame = 0


Query: 1   MATNLLTFAPAGIRACAASADRRSDHNRRKT-SSSSNWWAPVFGWSSEPDYIDSGNKAEP 60
           MATNL TFAP  IRACA+SA    DHNRRKT SSSSNWWAPVFGWSSEPDYIDS NK+ P
Sbjct: 1   MATNLFTFAPTSIRACASSA----DHNRRKTSSSSSNWWAPVFGWSSEPDYIDSANKSNP 60

Query: 61  QDLTGGTSKSDVETKSVRARFSPGCFTEAKARQLRMMTTKTESFHDVMYHSAIASRLASD 120
           +    G SKSD ETKS R RFSPGCFTE+KARQLR+MT +TESFHDVMYHSAIASRLA+D
Sbjct: 61  KTPADGVSKSDPETKSARNRFSPGCFTESKARQLRLMTMETESFHDVMYHSAIASRLATD 120

Query: 121 FKTHADS 127
           FK+  DS
Sbjct: 121 FKSRGDS 123

[Close]

BLAST of CcUC06G120520 vs. TAIR 10
Match: AT1G52720.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G15630.1); Has 61 Blast hits to 61 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 61; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 90.9 bits (224), Expect = 7.9e-19
Identity = 55/119 (46.22%), Postives = 69/119 (57.98%), Query Frame = 0


Query: 1   MATNLLTFAPAGIRACAASADRRSDHNRRKTSSSSNWWAPVFGWSSEPDYIDSGNKAEPQ 60
           MA  +   A   IRA + S     D NR+K   S+ WWAP+FG  S+PDY++     E  
Sbjct: 1   MALIITCSALPTIRASSGSGSLNPDQNRKK---SAAWWAPLFGLPSDPDYLN----IESS 60

Query: 61  DLTGGTSKSDVETKSVRARFSPGCFTEAKARQLRMMTTKTESFHDVMYHSAIASRLASD 120
             T    K+D+       +F  GCFTE KA+QLR  T +  +FHDVMYHSAIASRLASD
Sbjct: 61  CSTVNPDKTDISGSG--QKFRRGCFTEEKAKQLRRKTAEASTFHDVMYHSAIASRLASD 110

[Close]

BLAST of CcUC06G120520 vs. TAIR 10
Match: AT3G15630.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G52720.1); Has 61 Blast hits to 61 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 61; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 87.4 bits (215), Expect = 8.8e-18
Identity = 55/121 (45.45%), Postives = 70/121 (57.85%), Query Frame = 0


Query: 1   MATNLLTFAPAGIRACAASADRRSDHNRRKTSSSSNWWAPVFGWSSEPDYIDSGNKAEPQ 60
           MAT +   A + IRA +      SD  R+K  SS +WWAP+FG SSEPDY++     E  
Sbjct: 1   MATIISCSALSSIRASS-----ESDPARKKPVSSVSWWAPLFGMSSEPDYVNKTVNLE-- 60

Query: 61  DLTGGTSKSDVETKSVRARFSPGCFTEAKARQLRMMTTKTESFHDVMYHSAIASRLASDF 120
                +     E +S+R      C TE KA+QLR  T +  +FHDVMYHSAIASRLASD 
Sbjct: 61  -----SDLDKAEKRSLRC-----CLTEEKAKQLRRKTAEASTFHDVMYHSAIASRLASDV 104

Query: 121 K 122
           +
Sbjct: 121 R 104

The following BLAST results are available for this feature:

BLAST of CcUC06G120520 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038880363.1	3.3e-59	94.44	uncharacterized protein LOC120072011 [Benincasa hispida]	[more]
XP_011656185.1	2.0e-56	88.89	uncharacterized protein LOC105435656 [Cucumis sativus] >KGN65295.1 hypothetical ...	[more]
XP_016903293.1	7.9e-53	86.61	PREDICTED: uncharacterized protein LOC103502747 [Cucumis melo] >KAA0046733.1 unc...	[more]
KAG6589876.1	3.2e-46	77.52	hypothetical protein SDJN03_15299, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_022960569.1	1.6e-45	76.15	uncharacterized protein LOC111461308 [Cucurbita moschata]	[more]

BLAST of CcUC06G120520 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of CcUC06G120520 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LTN7	9.7e-57	88.89	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G303705 PE=4 SV=1	[more]
A0A5D3CSV6	3.8e-53	86.61	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A1S4E4Y4	3.8e-53	86.61	uncharacterized protein LOC103502747 OS=Cucumis melo OX=3656 GN=LOC103502747 PE=...	[more]
A0A6J1HBD8	7.7e-46	76.15	uncharacterized protein LOC111461308 OS=Cucurbita moschata OX=3662 GN=LOC1114613...	[more]
A0A6J1JBM9	3.8e-45	77.17	uncharacterized protein LOC111485309 OS=Cucurbita maxima OX=3661 GN=LOC111485309...	[more]

BLAST of CcUC06G120520 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G52720.1	7.9e-19	46.22	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT3G15630.1	8.8e-18	45.45	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 49..73
None	No IPR available	PANTHER	PTHR34198:SF18	PROTEIN, PUTATIVE-RELATED	coord: 1..125
None	No IPR available	PANTHER	PTHR34198	OS01G0175100 PROTEIN	coord: 1..125

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CcUC06G120520.1	CcUC06G120520.1	mRNA