Sequences
The following sequences are available for this feature:
Legend: exon CDS polypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGTTCTGCCACTCCAAGTCGCCAAATTCCAAATAACCCACCAAGAAGGGGTCAGATCAAGGTTAAAATTGGTAAGGATTTTGCCACCTCAGCAGCCTCTGCAGCATCCTATATCGCCACCGCACTCGCCGGATTCATCCCAGATCCTACCCCGCCGGAGAATGCTCCGCCGCCCCCTCCGCCCCCTGCCGGTACTTAG
ATGGGTTCTGCCACTCCAAGTCGCCAAATTCCAAATAACCCACCAAGAAGGGGTCAGATCAAGGTTAAAATTGGTAAGGATTTTGCCACCTCAGCAGCCTCTGCAGCATCCTATATCGCCACCGCACTCGCCGGATTCATCCCAGATCCTACCCCGCCGGAGAATGCTCCGCCGCCCCCTCCGCCCCCTGCCGGTACTTAG
ATGGGTTCTGCCACTCCAAGTCGCCAAATTCCAAATAACCCACCAAGAAGGGGTCAGATCAAGGTTAAAATTGGTAAGGATTTTGCCACCTCAGCAGCCTCTGCAGCATCCTATATCGCCACCGCACTCGCCGGATTCATCCCAGATCCTACCCCGCCGGAGAATGCTCCGCCGCCCCCTCCGCCCCCTGCCGGTACTTAG
MGSATPSRQIPNNPPRRGQIKVKIGKDFATSAASAASYIATALAGFIPDPTPPENAPPPPPPPAGT
Homology
BLAST of CcUC03G044330 vs. NCBI nr
Match:
KGN65654.1 (hypothetical protein Csa_019816 [Cucumis sativus])
HSP 1 Score: 80.1 bits (196), Expect = 7.9e-12
Identity = 41/54 (75.93%), Postives = 46/54 (85.19%), Query Frame = 0
BLAST of CcUC03G044330 vs. NCBI nr
Match:
TYK02876.1 (hypothetical protein E5676_scaffold968G00050 [Cucumis melo var. makuwa])
HSP 1 Score: 65.9 bits (159), Expect = 1.5e-07
Identity = 32/47 (68.09%), Postives = 38/47 (80.85%), Query Frame = 0
BLAST of CcUC03G044330 vs. ExPASy TrEMBL
Match:
A0A0A0LX95 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G479110 PE=4 SV=1)
HSP 1 Score: 80.1 bits (196), Expect = 3.8e-12
Identity = 41/54 (75.93%), Postives = 46/54 (85.19%), Query Frame = 0
BLAST of CcUC03G044330 vs. ExPASy TrEMBL
Match:
A0A5D3BXB9 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold968G00050 PE=4 SV=1)
HSP 1 Score: 65.9 bits (159), Expect = 7.4e-08
Identity = 32/47 (68.09%), Postives = 38/47 (80.85%), Query Frame = 0
The following BLAST results are available for this feature:
Match Name E-value Identity Description
KGN65654.1 7.9e-12 75.93 hypothetical protein Csa_019816 [Cucumis sativus] [more] TYK02876.1 1.5e-07 68.09 hypothetical protein E5676_scaffold968G00050 [Cucumis melo var. makuwa] [more]
Match Name E-value Identity Description
Match Name E-value Identity Description
A0A0A0LX95 3.8e-12 75.93 Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G479110 PE=4 SV=1 [more] A0A5D3BXB9 7.4e-08 68.09 Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
Match Name E-value Identity Description
InterPro
Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31
A T G G G T T C T G C C A C T C C A A G T C G C C A A A T T C C A A A T A A C C C A C C A A G A A G G G G T C A G A T C A A G G T T A A A A T T G G T A A G G A T T T T G C C A C C T C A G C A G C C T C T G C A G C A T C C T A T A T C G C C A C C G C A C T C G C C G G A T T C A T C C C A G A T C C T A C C C C G C C G G A G A A T G C T C C G C C G C C C C C T C C G C C C C C T G C C G G T A C T T A G 20 40 60 80 100 120 140 160 180 200 Score = Score = Sequence mobidb-lite mobidb-lite
IPR Term IPR Description Source Source Term Source Description Alignment
None No IPR available MOBIDB_LITE mobidb-lite disorder_prediction coord: 50..66 None No IPR available MOBIDB_LITE mobidb-lite disorder_prediction coord: 46..66
Relationships
The following mRNA feature(s) are a part of this gene:
