Clc11G01220 (gene) Watermelon (cordophanus) v2

Overview


Name	Clc11G01220
Type	gene
Organism	Citrullus lanatus subsp. cordophanus cv. cordophanus (Watermelon (cordophanus) v2)
Description	40S ribosomal protein S5-like
Location	ClcChr11: 1310816 .. 1313670 (-)
RNA-Seq Expression	Clc11G01220
Synteny	Clc11G01220

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTGTGGTGAGAGAATCTCATCCCATCTCATAAAAGTGTGTTGTGAGAGAAGATTCATTCTTGAAAAAGGAGAGTCAACCTAGGAAAGCACTACCAATCTCGAGGCATTTTGAGTTGTATTTCCAACGTCATTTAATTGATTTATTTCCTTCTAGAACGTTATTTTGTAGCTATGATTTCTGATTGAATGGAGTTCATTTTTTATCATTGGTAATGAGTTAAATCCTCCTGGGGGTTCGACAATGTGGATGCCCTAGGCTTGTTATGGCTTAAGTAATGTTTACAAATATAGCAAAATTTTACTGTGTATTTTGCTATTAGTCGTAAATATTTTCAGCAGTTTTGTCATTTAAGATAATTTTTCATATGTTAACTTGTTTCAAAATCATTAAAGATTTATTTACTAATTTAAATTTAATTTTTTTAATTTTTTTTATAAATTTTTTCAAAACTATCCATCAAAATCTACATTGTAGGACATCAAATTTTTTATTTTTTATTTTTATTTTTATTATTATTATTATTATTTTAAATTAAGACTTCTATTTTAAGTCGACATCAATATTTTAAACTTGGATGATAGTATATATATAATATTTGATTTTAGGGTTTTTTCCTTCCCCGTTTCCCTCCCACTATTTCAGCCGCCTCCTTCCCCATTTTTTTTCTAGGGCTAAATACAAACACATTCCTCCGCTTGCAGCCGATTACTATTCGTCTTCCTCACCCTTCCACTTTCCTCCTTTGCTCGGCGGCCTACTACGGTAACACCCTCCCCTTCATACTTTTGATTCTGTTAAGCCTCTGGTTGTTGCTCTTATTGTTATTGTTTTTCTATGGAGTTCTTCAGTATTATAGGTAAATTTTACTTTTTTTGCGAGTAACTGCGGGTTTTTCGAGTTTTTTTGTTTCTGATATTTGCAGGAATTGGTCGAAGTATATATATATTCTCCGTTCCTTGGATTGAAATACTAGATCTATTATGTTTCTATCACTCTTGTTCATATTAGTTTTACCTCTCCTGCACTGGTATGAATAAAATGGATCTGATCTTTTAAGACCCATCTCTTCTGGGGAAGTTTGAACTCTTGCTGATAACTCCTTTCTCACTCAAGCTGTAAAGAAATGATGTTGGGATTAAGATAAGCCATGGACGAAAGTTCTGGAATATAATGTTATGTTCTAATTATTTCAGTTATATGCATTTGTATCCAATTTACTCCCTGGTTGTGAGTATGCCTACTATTGACCATAGTGTTTTCTCCAGTTTGTAGTGCACTTAACTTGTACAACTTTATATTAGCACACTTAACATGTTGTTTATAGAGAGTATACTGAGCACTTAGGGATGCCCTATTGAGTCATGGGGAGTTTTCGTTTTACAGACAGACAGATACTAAGATTTTTGGCCGAGCTTGACCCCTGTTTTATTCTTTTTTCTTTTTTCTTTATTTTTATAGGAAGCTCTGGCTGTCAAAATTATATTATGTGATCATTGACATATTAATCTATCATTAGGGAATTGAATAATACGAAGTAAAGTCTTATTTATCTAATTTTTTTAGTTTGGATTTATTACTTTTGTTGAAAAGCATGATTGTTAATGAAATCCATAGACATTTGTGGAAATTTGTCTCAGGTGTTTCTCTCTCTGTGCTTTTTCTTCTCACTATATTTTCCATTCGGAATGGGGGTATTTGCTTCTTGGAGAATGTGTGGATTGGTGATAGTCGTCTTTTTCATTTTCATTGCCTTTATAATTTCTCTCTGGAAAAATGTATTTGGCTTCTCTTTGCAACTTTTGTGCTGCAACTGTGTTTTATGACGCCAATTTGAGGAGAAATTTGAACAATAGAGTCCCTGATCCCTCCTATCATCTGGTTTTTTGGGAGGTCTCTCTCTGGCCTAGTGTGGGAGATGGGAGAATGAGGAACCCTTTATTAGAAATGGTCCTATTCTTATGGTGCTTCTCATTTATCACCTTTACAGTTGAACCTTATTAGGTTTTTGAATTCGTGATATTGCCTGCATTTTTTGGGGTGAAAATTGTGGCCTTTTATAAGTTAAGGCTAGAGACAGGATGTTCTGGAGTAACATTTGAGTGTTGAGAAGTTTATGACCATCTAATTTGCACAAGGGAGAATGAAAATGATTAGGTATCTGGATACACATTACATGATTTATCCATCTAGTGCTCACCTTTTCTTTGTTCTGATATTCTTCAGGAATAATGGCTGTCGAAGTTGATGTGGTAAACCAGGAGCTGACCCAGCCTCATCACGATGTGAAGCTGTTCAATAGGTGGACCTTTGATGATGTTCAGGTGAATGACATCTCTCTGGTTGATTACATTGGGGTTGCACCTGCCAAGCATGCCACCTATGTCCCTCACACTGCTGGGAGGTACTCTGTCAAGCGTTTTCGAAAAGCTCAGTGCCCAATTGTGGAGAGGCTCACGAATTCACTGATGATGCATGGCCGAAACAATGGGAAGAAACTCATGGCTGTCAGGATTATCAAGCATGCAATGGAGATTATTCATCTTCTAACTGATCTCAATCCAATTCAAGTCATTGTCGACGCCGTTGTTAACAGTGGACCACGTGAAGATGCTACTCGAATTGGTTCGGCTGGTGTTGTAAGACGTCAAGCTGTGGATATATCCCCTCTGCGACGTGTTAACCAAGCAATCTATCTTCTTACGACCGGTGCTCGTGAGGCAGCCTTCAGAAATATCAAAACAATTGCAGAATGCTTGGCTGATGAACTTATTAATGCAGCAAAGGGATCGTCCAACAGTTATGCAATCAAGAAAAAGGATGAGATTGAGAGAGTTGCGAAGGCCAATCGTTGA

mRNA sequence

ATGTGTGGTGAGAGAATCTCATCCCATCTCATAAAACCGATTACTATTCGTCTTCCTCACCCTTCCACTTTCCTCCTTTGCTCGGCGGCCTACTACGGAATAATGGCTGTCGAAGTTGATGTGGTAAACCAGGAGCTGACCCAGCCTCATCACGATGTGAAGCTGTTCAATAGGTGGACCTTTGATGATGTTCAGGTGAATGACATCTCTCTGGTTGATTACATTGGGGTTGCACCTGCCAAGCATGCCACCTATGTCCCTCACACTGCTGGGAGGTACTCTGTCAAGCGTTTTCGAAAAGCTCAGTGCCCAATTGTGGAGAGGCTCACGAATTCACTGATGATGCATGGCCGAAACAATGGGAAGAAACTCATGGCTGTCAGGATTATCAAGCATGCAATGGAGATTATTCATCTTCTAACTGATCTCAATCCAATTCAAGTCATTGTCGACGCCGTTGTTAACAGTGGACCACGTGAAGATGCTACTCGAATTGGTTCGGCTGGTGTTGTAAGACGTCAAGCTGTGGATATATCCCCTCTGCGACGTGTTAACCAAGCAATCTATCTTCTTACGACCGGTGCTCGTGAGGCAGCCTTCAGAAATATCAAAACAATTGCAGAATGCTTGGCTGATGAACTTATTAATGCAGCAAAGGGATCGTCCAACAGTTATGCAATCAAGAAAAAGGATGAGATTGAGAGAGTTGCGAAGGCCAATCGTTGA

Coding sequence (CDS)

ATGTGTGGTGAGAGAATCTCATCCCATCTCATAAAACCGATTACTATTCGTCTTCCTCACCCTTCCACTTTCCTCCTTTGCTCGGCGGCCTACTACGGAATAATGGCTGTCGAAGTTGATGTGGTAAACCAGGAGCTGACCCAGCCTCATCACGATGTGAAGCTGTTCAATAGGTGGACCTTTGATGATGTTCAGGTGAATGACATCTCTCTGGTTGATTACATTGGGGTTGCACCTGCCAAGCATGCCACCTATGTCCCTCACACTGCTGGGAGGTACTCTGTCAAGCGTTTTCGAAAAGCTCAGTGCCCAATTGTGGAGAGGCTCACGAATTCACTGATGATGCATGGCCGAAACAATGGGAAGAAACTCATGGCTGTCAGGATTATCAAGCATGCAATGGAGATTATTCATCTTCTAACTGATCTCAATCCAATTCAAGTCATTGTCGACGCCGTTGTTAACAGTGGACCACGTGAAGATGCTACTCGAATTGGTTCGGCTGGTGTTGTAAGACGTCAAGCTGTGGATATATCCCCTCTGCGACGTGTTAACCAAGCAATCTATCTTCTTACGACCGGTGCTCGTGAGGCAGCCTTCAGAAATATCAAAACAATTGCAGAATGCTTGGCTGATGAACTTATTAATGCAGCAAAGGGATCGTCCAACAGTTATGCAATCAAGAAAAAGGATGAGATTGAGAGAGTTGCGAAGGCCAATCGTTGA

Protein sequence

MCGERISSHLIKPITIRLPHPSTFLLCSAAYYGIMAVEVDVVNQELTQPHHDVKLFNRWTFDDVQVNDISLVDYIGVAPAKHATYVPHTAGRYSVKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIIKHAMEIIHLLTDLNPIQVIVDAVVNSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGAREAAFRNIKTIAECLADELINAAKGSSNSYAIKKKDEIERVAKANR

Homology

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BLAST of Clc11G01220 vs. NCBI nr
Match: XP_038888890.1 (40S ribosomal protein S5-like isoform X1 [Benincasa hispida])

HSP 1 Score: 411.4 bits (1056), Expect = 5.4e-111
Identity = 210/210 (100.00%), Postives = 210/210 (100.00%), Query Frame = 0


Query: 32  YGIMAVEVDVVNQELTQPHHDVKLFNRWTFDDVQVNDISLVDYIGVAPAKHATYVPHTAG 91
           YGIMAVEVDVVNQELTQPHHDVKLFNRWTFDDVQVNDISLVDYIGVAPAKHATYVPHTAG
Sbjct: 12  YGIMAVEVDVVNQELTQPHHDVKLFNRWTFDDVQVNDISLVDYIGVAPAKHATYVPHTAG 71

Query: 92  RYSVKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIIKHAMEIIHLLTDLNPIQVIVD 151
           RYSVKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIIKHAMEIIHLLTDLNPIQVIVD
Sbjct: 72  RYSVKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIIKHAMEIIHLLTDLNPIQVIVD 131

Query: 152 AVVNSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGAREAAFRNIKTIAECLA 211
           AVVNSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGAREAAFRNIKTIAECLA
Sbjct: 132 AVVNSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGAREAAFRNIKTIAECLA 191

Query: 212 DELINAAKGSSNSYAIKKKDEIERVAKANR 242
           DELINAAKGSSNSYAIKKKDEIERVAKANR
Sbjct: 192 DELINAAKGSSNSYAIKKKDEIERVAKANR 221

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BLAST of Clc11G01220 vs. NCBI nr
Match: XP_008447164.1 (PREDICTED: 40S ribosomal protein S5-like isoform X1 [Cucumis melo])

HSP 1 Score: 410.2 bits (1053), Expect = 1.2e-110
Identity = 209/214 (97.66%), Postives = 212/214 (99.07%), Query Frame = 0


Query: 28  SAAYYGIMAVEVDVVNQELTQPHHDVKLFNRWTFDDVQVNDISLVDYIGVAPAKHATYVP 87
           S ++ GIMAVE+DVVNQELTQPHHDVKLFNRWTFDDVQVNDISLVDYIGVAPAKHATYVP
Sbjct: 7   SLSHLGIMAVEIDVVNQELTQPHHDVKLFNRWTFDDVQVNDISLVDYIGVAPAKHATYVP 66

Query: 88  HTAGRYSVKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIIKHAMEIIHLLTDLNPIQ 147
           HTAGRYSVKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIIKHAMEIIHLLTDLNPIQ
Sbjct: 67  HTAGRYSVKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIIKHAMEIIHLLTDLNPIQ 126

Query: 148 VIVDAVVNSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGAREAAFRNIKTIA 207
           VIVDAVVNSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGAREAAFRNIKTIA
Sbjct: 127 VIVDAVVNSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGAREAAFRNIKTIA 186

Query: 208 ECLADELINAAKGSSNSYAIKKKDEIERVAKANR 242
           ECLADELINAAKGSSNSYAIKKKDEIERVAKANR
Sbjct: 187 ECLADELINAAKGSSNSYAIKKKDEIERVAKANR 220

[Close]

BLAST of Clc11G01220 vs. NCBI nr
Match: XP_008456864.1 (PREDICTED: 40S ribosomal protein S5-like [Cucumis melo])

HSP 1 Score: 409.1 bits (1050), Expect = 2.7e-110
Identity = 209/214 (97.66%), Postives = 211/214 (98.60%), Query Frame = 0


Query: 28  SAAYYGIMAVEVDVVNQELTQPHHDVKLFNRWTFDDVQVNDISLVDYIGVAPAKHATYVP 87
           S+ + G MAVEVDVVNQELTQPHHDVKLFNRWTFDDVQVNDISLVDYIGVAPAKHATYVP
Sbjct: 40  SSTFSGTMAVEVDVVNQELTQPHHDVKLFNRWTFDDVQVNDISLVDYIGVAPAKHATYVP 99

Query: 88  HTAGRYSVKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIIKHAMEIIHLLTDLNPIQ 147
           HTAGRYSVKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIIKHAMEIIHLLTDLNPIQ
Sbjct: 100 HTAGRYSVKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIIKHAMEIIHLLTDLNPIQ 159

Query: 148 VIVDAVVNSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGAREAAFRNIKTIA 207
           VIVDAVVNSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGAREAAFRNIKTIA
Sbjct: 160 VIVDAVVNSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGAREAAFRNIKTIA 219

Query: 208 ECLADELINAAKGSSNSYAIKKKDEIERVAKANR 242
           ECLADELINAAKGSSNSYAIKKKDEIERVAKANR
Sbjct: 220 ECLADELINAAKGSSNSYAIKKKDEIERVAKANR 253

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BLAST of Clc11G01220 vs. NCBI nr
Match: KAE8652818.1 (hypothetical protein Csa_022860 [Cucumis sativus])

HSP 1 Score: 407.9 bits (1047), Expect = 6.0e-110
Identity = 208/216 (96.30%), Postives = 211/216 (97.69%), Query Frame = 0


Query: 26  LCSAAYYGIMAVEVDVVNQELTQPHHDVKLFNRWTFDDVQVNDISLVDYIGVAPAKHATY 85
           LCS   +GIMAVEVDV +QELTQ HHDVKLFNRWTFDDVQVNDISLVDY+GVAPAKHATY
Sbjct: 264 LCSYQQFGIMAVEVDVASQELTQSHHDVKLFNRWTFDDVQVNDISLVDYVGVAPAKHATY 323

Query: 86  VPHTAGRYSVKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIIKHAMEIIHLLTDLNP 145
           VPHTAGRYSVKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIIKHAMEIIHLLTDLNP
Sbjct: 324 VPHTAGRYSVKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIIKHAMEIIHLLTDLNP 383

Query: 146 IQVIVDAVVNSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGAREAAFRNIKT 205
           IQVIVDAVVNSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGAREAAFRNIKT
Sbjct: 384 IQVIVDAVVNSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGAREAAFRNIKT 443

Query: 206 IAECLADELINAAKGSSNSYAIKKKDEIERVAKANR 242
           IAECLADELINAAKGSSNSYAIKKKDEIERVAKANR
Sbjct: 444 IAECLADELINAAKGSSNSYAIKKKDEIERVAKANR 479

[Close]

BLAST of Clc11G01220 vs. NCBI nr
Match: XP_038888891.1 (40S ribosomal protein S5-like isoform X2 [Benincasa hispida] >XP_038888892.1 40S ribosomal protein S5-like isoform X2 [Benincasa hispida] >XP_038888893.1 40S ribosomal protein S5-like isoform X2 [Benincasa hispida] >XP_038893011.1 40S ribosomal protein S5-like [Benincasa hispida] >XP_038893013.1 40S ribosomal protein S5-like [Benincasa hispida] >KAA0032160.1 40S ribosomal protein S5-like isoform X1 [Cucumis melo var. makuwa] >TYK14405.1 40S ribosomal protein S5-like isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 404.8 bits (1039), Expect = 5.1e-109
Identity = 207/207 (100.00%), Postives = 207/207 (100.00%), Query Frame = 0


Query: 35  MAVEVDVVNQELTQPHHDVKLFNRWTFDDVQVNDISLVDYIGVAPAKHATYVPHTAGRYS 94
           MAVEVDVVNQELTQPHHDVKLFNRWTFDDVQVNDISLVDYIGVAPAKHATYVPHTAGRYS
Sbjct: 1   MAVEVDVVNQELTQPHHDVKLFNRWTFDDVQVNDISLVDYIGVAPAKHATYVPHTAGRYS 60

Query: 95  VKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIIKHAMEIIHLLTDLNPIQVIVDAVV 154
           VKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIIKHAMEIIHLLTDLNPIQVIVDAVV
Sbjct: 61  VKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIIKHAMEIIHLLTDLNPIQVIVDAVV 120

Query: 155 NSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGAREAAFRNIKTIAECLADEL 214
           NSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGAREAAFRNIKTIAECLADEL
Sbjct: 121 NSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGAREAAFRNIKTIAECLADEL 180

Query: 215 INAAKGSSNSYAIKKKDEIERVAKANR 242
           INAAKGSSNSYAIKKKDEIERVAKANR
Sbjct: 181 INAAKGSSNSYAIKKKDEIERVAKANR 207

[Close]

BLAST of Clc11G01220 vs. ExPASy Swiss-Prot
Match: Q9ZUT9 (40S ribosomal protein S5-1 OS=Arabidopsis thaliana OX=3702 GN=RPS5A PE=1 SV=1)

HSP 1 Score: 357.5 bits (916), Expect = 1.2e-97
Identity = 183/207 (88.41%), Postives = 197/207 (95.17%), Query Frame = 0


Query: 36  AVEVDV-VNQELTQPHHDVKLFNRWTFDDVQVNDISLVDYIGVAPAKHATYVPHTAGRYS 95
           + E+D  + Q+LT   ++VKLFNRW+FDDV V DISLVDYIGV P+KHAT+VPHTAGRYS
Sbjct: 4   SAEIDAEIQQQLT---NEVKLFNRWSFDDVSVTDISLVDYIGVQPSKHATFVPHTAGRYS 63

Query: 96  VKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIIKHAMEIIHLLTDLNPIQVIVDAVV 155
           VKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRI+KHAMEIIHLL+DLNPIQVI+DA+V
Sbjct: 64  VKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAMEIIHLLSDLNPIQVIIDAIV 123

Query: 156 NSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGAREAAFRNIKTIAECLADEL 215
           NSGPREDATRIGSAGVVRRQAVDISPLRRVNQAI+LLTTGAREAAFRNIKTIAECLADEL
Sbjct: 124 NSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIFLLTTGAREAAFRNIKTIAECLADEL 183

Query: 216 INAAKGSSNSYAIKKKDEIERVAKANR 242
           INAAKGSSNSYAIKKKDEIERVAKANR
Sbjct: 184 INAAKGSSNSYAIKKKDEIERVAKANR 207

[Close]

BLAST of Clc11G01220 vs. ExPASy Swiss-Prot
Match: O65731 (40S ribosomal protein S5 (Fragment) OS=Cicer arietinum OX=3827 GN=RPS5 PE=2 SV=1)

HSP 1 Score: 356.3 bits (913), Expect = 2.7e-97
Identity = 180/190 (94.74%), Postives = 188/190 (98.95%), Query Frame = 0


Query: 52  DVKLFNRWTFDDVQVNDISLVDYIGVAPAKHATYVPHTAGRYSVKRFRKAQCPIVERLTN 111
           +VKLFNRW+FDDVQ++D+SL+DYIGV P+KHATYVPHTAGRYSVKRFRKAQCPIVERLTN
Sbjct: 8   EVKLFNRWSFDDVQLSDVSLIDYIGVVPSKHATYVPHTAGRYSVKRFRKAQCPIVERLTN 67

Query: 112 SLMMHGRNNGKKLMAVRIIKHAMEIIHLLTDLNPIQVIVDAVVNSGPREDATRIGSAGVV 171
           SLMMHGRNNGKKLMAVRIIKHAMEIIHLLTD NPIQVIVDAVVNSGPREDATRIGSAGVV
Sbjct: 68  SLMMHGRNNGKKLMAVRIIKHAMEIIHLLTDQNPIQVIVDAVVNSGPREDATRIGSAGVV 127

Query: 172 RRQAVDISPLRRVNQAIYLLTTGAREAAFRNIKTIAECLADELINAAKGSSNSYAIKKKD 231
           RRQAVDISPLRRVNQAIYLLTTGAREAAFRNIK+IAECLADELINAAKGSSNSYAIKKKD
Sbjct: 128 RRQAVDISPLRRVNQAIYLLTTGAREAAFRNIKSIAECLADELINAAKGSSNSYAIKKKD 187

Query: 232 EIERVAKANR 242
           EIERVAKANR
Sbjct: 188 EIERVAKANR 197

[Close]

BLAST of Clc11G01220 vs. ExPASy Swiss-Prot
Match: P51427 (40S ribosomal protein S5-2 OS=Arabidopsis thaliana OX=3702 GN=RPS5B PE=1 SV=2)

HSP 1 Score: 354.0 bits (907), Expect = 1.4e-96
Identity = 183/207 (88.41%), Postives = 195/207 (94.20%), Query Frame = 0


Query: 36  AVEVDV-VNQELTQPHHDVKLFNRWTFDDVQVNDISLVDYIGVAPAKHATYVPHTAGRYS 95
           A +VD  + Q LT   ++VKLFNRWT+DDV V DISLVDYIGV  AKHAT+VPHTAGRYS
Sbjct: 4   AADVDAEIQQALT---NEVKLFNRWTYDDVTVTDISLVDYIGVQAAKHATFVPHTAGRYS 63

Query: 96  VKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIIKHAMEIIHLLTDLNPIQVIVDAVV 155
           VKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRI+KHAMEIIHLL+DLNPIQVI+DA+V
Sbjct: 64  VKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAMEIIHLLSDLNPIQVIIDAIV 123

Query: 156 NSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGAREAAFRNIKTIAECLADEL 215
           NSGPREDATRIGSAGVVRRQAVDISPLRRVNQAI+L+TTGAREAAFRNIKTIAECLADEL
Sbjct: 124 NSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIFLITTGAREAAFRNIKTIAECLADEL 183

Query: 216 INAAKGSSNSYAIKKKDEIERVAKANR 242
           INAAKGSSNSYAIKKKDEIERVAKANR
Sbjct: 184 INAAKGSSNSYAIKKKDEIERVAKANR 207

[Close]

BLAST of Clc11G01220 vs. ExPASy Swiss-Prot
Match: Q5E988 (40S ribosomal protein S5 OS=Bos taurus OX=9913 GN=RPS5 PE=2 SV=3)

HSP 1 Score: 309.7 bits (792), Expect = 2.9e-83
Identity = 154/190 (81.05%), Postives = 174/190 (91.58%), Query Frame = 0


Query: 52  DVKLFNRWTFDDVQVNDISLVDYIGVAPAKHATYVPHTAGRYSVKRFRKAQCPIVERLTN 111
           D+KLF +W+ DDVQ+NDISL DYI V   K+A Y+PH+AGRY+ KRFRKAQCPIVERLTN
Sbjct: 16  DIKLFGKWSTDDVQINDISLQDYIAV-KEKYAKYLPHSAGRYAAKRFRKAQCPIVERLTN 75

Query: 112 SLMMHGRNNGKKLMAVRIIKHAMEIIHLLTDLNPIQVIVDAVVNSGPREDATRIGSAGVV 171
           S+MMHGRNNGKKLM VRI+KHA EIIHLLT  NP+QV+V+A++NSGPRED+TRIG AG V
Sbjct: 76  SMMMHGRNNGKKLMTVRIVKHAFEIIHLLTGENPLQVLVNAIINSGPREDSTRIGRAGTV 135

Query: 172 RRQAVDISPLRRVNQAIYLLTTGAREAAFRNIKTIAECLADELINAAKGSSNSYAIKKKD 231
           RRQAVD+SPLRRVNQAI+LL TGAREAAFRNIKTIAECLADELINAAKGSSNSYAIKKKD
Sbjct: 136 RRQAVDVSPLRRVNQAIWLLCTGAREAAFRNIKTIAECLADELINAAKGSSNSYAIKKKD 195

Query: 232 EIERVAKANR 242
           E+ERVAK+NR
Sbjct: 196 ELERVAKSNR 204

[Close]

BLAST of Clc11G01220 vs. ExPASy Swiss-Prot
Match: P46782 (40S ribosomal protein S5 OS=Homo sapiens OX=9606 GN=RPS5 PE=1 SV=4)

HSP 1 Score: 309.7 bits (792), Expect = 2.9e-83
Identity = 154/190 (81.05%), Postives = 174/190 (91.58%), Query Frame = 0


Query: 52  DVKLFNRWTFDDVQVNDISLVDYIGVAPAKHATYVPHTAGRYSVKRFRKAQCPIVERLTN 111
           D+KLF +W+ DDVQ+NDISL DYI V   K+A Y+PH+AGRY+ KRFRKAQCPIVERLTN
Sbjct: 16  DIKLFGKWSTDDVQINDISLQDYIAV-KEKYAKYLPHSAGRYAAKRFRKAQCPIVERLTN 75

Query: 112 SLMMHGRNNGKKLMAVRIIKHAMEIIHLLTDLNPIQVIVDAVVNSGPREDATRIGSAGVV 171
           S+MMHGRNNGKKLM VRI+KHA EIIHLLT  NP+QV+V+A++NSGPRED+TRIG AG V
Sbjct: 76  SMMMHGRNNGKKLMTVRIVKHAFEIIHLLTGENPLQVLVNAIINSGPREDSTRIGRAGTV 135

Query: 172 RRQAVDISPLRRVNQAIYLLTTGAREAAFRNIKTIAECLADELINAAKGSSNSYAIKKKD 231
           RRQAVD+SPLRRVNQAI+LL TGAREAAFRNIKTIAECLADELINAAKGSSNSYAIKKKD
Sbjct: 136 RRQAVDVSPLRRVNQAIWLLCTGAREAAFRNIKTIAECLADELINAAKGSSNSYAIKKKD 195

Query: 232 EIERVAKANR 242
           E+ERVAK+NR
Sbjct: 196 ELERVAKSNR 204

[Close]

BLAST of Clc11G01220 vs. ExPASy TrEMBL
Match: A0A1S3BGS9 (40S ribosomal protein S5-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC103489682 PE=3 SV=1)

HSP 1 Score: 410.2 bits (1053), Expect = 5.9e-111
Identity = 209/214 (97.66%), Postives = 212/214 (99.07%), Query Frame = 0


Query: 28  SAAYYGIMAVEVDVVNQELTQPHHDVKLFNRWTFDDVQVNDISLVDYIGVAPAKHATYVP 87
           S ++ GIMAVE+DVVNQELTQPHHDVKLFNRWTFDDVQVNDISLVDYIGVAPAKHATYVP
Sbjct: 7   SLSHLGIMAVEIDVVNQELTQPHHDVKLFNRWTFDDVQVNDISLVDYIGVAPAKHATYVP 66

Query: 88  HTAGRYSVKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIIKHAMEIIHLLTDLNPIQ 147
           HTAGRYSVKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIIKHAMEIIHLLTDLNPIQ
Sbjct: 67  HTAGRYSVKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIIKHAMEIIHLLTDLNPIQ 126

Query: 148 VIVDAVVNSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGAREAAFRNIKTIA 207
           VIVDAVVNSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGAREAAFRNIKTIA
Sbjct: 127 VIVDAVVNSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGAREAAFRNIKTIA 186

Query: 208 ECLADELINAAKGSSNSYAIKKKDEIERVAKANR 242
           ECLADELINAAKGSSNSYAIKKKDEIERVAKANR
Sbjct: 187 ECLADELINAAKGSSNSYAIKKKDEIERVAKANR 220

[Close]

BLAST of Clc11G01220 vs. ExPASy TrEMBL
Match: A0A1S3C3S7 (40S ribosomal protein S5-like OS=Cucumis melo OX=3656 GN=LOC103496679 PE=3 SV=1)

HSP 1 Score: 409.1 bits (1050), Expect = 1.3e-110
Identity = 209/214 (97.66%), Postives = 211/214 (98.60%), Query Frame = 0


Query: 28  SAAYYGIMAVEVDVVNQELTQPHHDVKLFNRWTFDDVQVNDISLVDYIGVAPAKHATYVP 87
           S+ + G MAVEVDVVNQELTQPHHDVKLFNRWTFDDVQVNDISLVDYIGVAPAKHATYVP
Sbjct: 40  SSTFSGTMAVEVDVVNQELTQPHHDVKLFNRWTFDDVQVNDISLVDYIGVAPAKHATYVP 99

Query: 88  HTAGRYSVKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIIKHAMEIIHLLTDLNPIQ 147
           HTAGRYSVKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIIKHAMEIIHLLTDLNPIQ
Sbjct: 100 HTAGRYSVKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIIKHAMEIIHLLTDLNPIQ 159

Query: 148 VIVDAVVNSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGAREAAFRNIKTIA 207
           VIVDAVVNSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGAREAAFRNIKTIA
Sbjct: 160 VIVDAVVNSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGAREAAFRNIKTIA 219

Query: 208 ECLADELINAAKGSSNSYAIKKKDEIERVAKANR 242
           ECLADELINAAKGSSNSYAIKKKDEIERVAKANR
Sbjct: 220 ECLADELINAAKGSSNSYAIKKKDEIERVAKANR 253

[Close]

BLAST of Clc11G01220 vs. ExPASy TrEMBL
Match: A0A5A7SN17 (40S ribosomal protein S5-like isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold186G00550 PE=3 SV=1)

HSP 1 Score: 404.8 bits (1039), Expect = 2.5e-109
Identity = 207/207 (100.00%), Postives = 207/207 (100.00%), Query Frame = 0


Query: 35  MAVEVDVVNQELTQPHHDVKLFNRWTFDDVQVNDISLVDYIGVAPAKHATYVPHTAGRYS 94
           MAVEVDVVNQELTQPHHDVKLFNRWTFDDVQVNDISLVDYIGVAPAKHATYVPHTAGRYS
Sbjct: 1   MAVEVDVVNQELTQPHHDVKLFNRWTFDDVQVNDISLVDYIGVAPAKHATYVPHTAGRYS 60

Query: 95  VKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIIKHAMEIIHLLTDLNPIQVIVDAVV 154
           VKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIIKHAMEIIHLLTDLNPIQVIVDAVV
Sbjct: 61  VKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIIKHAMEIIHLLTDLNPIQVIVDAVV 120

Query: 155 NSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGAREAAFRNIKTIAECLADEL 214
           NSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGAREAAFRNIKTIAECLADEL
Sbjct: 121 NSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGAREAAFRNIKTIAECLADEL 180

Query: 215 INAAKGSSNSYAIKKKDEIERVAKANR 242
           INAAKGSSNSYAIKKKDEIERVAKANR
Sbjct: 181 INAAKGSSNSYAIKKKDEIERVAKANR 207

[Close]

BLAST of Clc11G01220 vs. ExPASy TrEMBL
Match: A0A5D3D3Q1 (40S ribosomal protein S5-like isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold306G00570 PE=3 SV=1)

HSP 1 Score: 404.4 bits (1038), Expect = 3.2e-109
Identity = 206/207 (99.52%), Postives = 207/207 (100.00%), Query Frame = 0


Query: 35  MAVEVDVVNQELTQPHHDVKLFNRWTFDDVQVNDISLVDYIGVAPAKHATYVPHTAGRYS 94
           MAVE+DVVNQELTQPHHDVKLFNRWTFDDVQVNDISLVDYIGVAPAKHATYVPHTAGRYS
Sbjct: 1   MAVEIDVVNQELTQPHHDVKLFNRWTFDDVQVNDISLVDYIGVAPAKHATYVPHTAGRYS 60

Query: 95  VKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIIKHAMEIIHLLTDLNPIQVIVDAVV 154
           VKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIIKHAMEIIHLLTDLNPIQVIVDAVV
Sbjct: 61  VKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIIKHAMEIIHLLTDLNPIQVIVDAVV 120

Query: 155 NSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGAREAAFRNIKTIAECLADEL 214
           NSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGAREAAFRNIKTIAECLADEL
Sbjct: 121 NSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGAREAAFRNIKTIAECLADEL 180

Query: 215 INAAKGSSNSYAIKKKDEIERVAKANR 242
           INAAKGSSNSYAIKKKDEIERVAKANR
Sbjct: 181 INAAKGSSNSYAIKKKDEIERVAKANR 207

[Close]

BLAST of Clc11G01220 vs. ExPASy TrEMBL
Match: A0A1S3BGS8 (40S ribosomal protein S5-like isoform X2 OS=Cucumis melo OX=3656 GN=LOC103489682 PE=3 SV=1)

HSP 1 Score: 404.4 bits (1038), Expect = 3.2e-109
Identity = 206/207 (99.52%), Postives = 207/207 (100.00%), Query Frame = 0


Query: 35  MAVEVDVVNQELTQPHHDVKLFNRWTFDDVQVNDISLVDYIGVAPAKHATYVPHTAGRYS 94
           MAVE+DVVNQELTQPHHDVKLFNRWTFDDVQVNDISLVDYIGVAPAKHATYVPHTAGRYS
Sbjct: 1   MAVEIDVVNQELTQPHHDVKLFNRWTFDDVQVNDISLVDYIGVAPAKHATYVPHTAGRYS 60

Query: 95  VKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIIKHAMEIIHLLTDLNPIQVIVDAVV 154
           VKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIIKHAMEIIHLLTDLNPIQVIVDAVV
Sbjct: 61  VKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIIKHAMEIIHLLTDLNPIQVIVDAVV 120

Query: 155 NSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGAREAAFRNIKTIAECLADEL 214
           NSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGAREAAFRNIKTIAECLADEL
Sbjct: 121 NSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGAREAAFRNIKTIAECLADEL 180

Query: 215 INAAKGSSNSYAIKKKDEIERVAKANR 242
           INAAKGSSNSYAIKKKDEIERVAKANR
Sbjct: 181 INAAKGSSNSYAIKKKDEIERVAKANR 207

[Close]

BLAST of Clc11G01220 vs. TAIR 10
Match: AT2G37270.1 (ribosomal protein 5B )

HSP 1 Score: 357.5 bits (916), Expect = 8.7e-99
Identity = 183/207 (88.41%), Postives = 197/207 (95.17%), Query Frame = 0


Query: 36  AVEVDV-VNQELTQPHHDVKLFNRWTFDDVQVNDISLVDYIGVAPAKHATYVPHTAGRYS 95
           + E+D  + Q+LT   ++VKLFNRW+FDDV V DISLVDYIGV P+KHAT+VPHTAGRYS
Sbjct: 4   SAEIDAEIQQQLT---NEVKLFNRWSFDDVSVTDISLVDYIGVQPSKHATFVPHTAGRYS 63

Query: 96  VKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIIKHAMEIIHLLTDLNPIQVIVDAVV 155
           VKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRI+KHAMEIIHLL+DLNPIQVI+DA+V
Sbjct: 64  VKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAMEIIHLLSDLNPIQVIIDAIV 123

Query: 156 NSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGAREAAFRNIKTIAECLADEL 215
           NSGPREDATRIGSAGVVRRQAVDISPLRRVNQAI+LLTTGAREAAFRNIKTIAECLADEL
Sbjct: 124 NSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIFLLTTGAREAAFRNIKTIAECLADEL 183

Query: 216 INAAKGSSNSYAIKKKDEIERVAKANR 242
           INAAKGSSNSYAIKKKDEIERVAKANR
Sbjct: 184 INAAKGSSNSYAIKKKDEIERVAKANR 207

[Close]

BLAST of Clc11G01220 vs. TAIR 10
Match: AT2G37270.2 (ribosomal protein 5B )

HSP 1 Score: 357.5 bits (916), Expect = 8.7e-99
Identity = 183/207 (88.41%), Postives = 197/207 (95.17%), Query Frame = 0


Query: 36  AVEVDV-VNQELTQPHHDVKLFNRWTFDDVQVNDISLVDYIGVAPAKHATYVPHTAGRYS 95
           + E+D  + Q+LT   ++VKLFNRW+FDDV V DISLVDYIGV P+KHAT+VPHTAGRYS
Sbjct: 4   SAEIDAEIQQQLT---NEVKLFNRWSFDDVSVTDISLVDYIGVQPSKHATFVPHTAGRYS 63

Query: 96  VKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIIKHAMEIIHLLTDLNPIQVIVDAVV 155
           VKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRI+KHAMEIIHLL+DLNPIQVI+DA+V
Sbjct: 64  VKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAMEIIHLLSDLNPIQVIIDAIV 123

Query: 156 NSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGAREAAFRNIKTIAECLADEL 215
           NSGPREDATRIGSAGVVRRQAVDISPLRRVNQAI+LLTTGAREAAFRNIKTIAECLADEL
Sbjct: 124 NSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIFLLTTGAREAAFRNIKTIAECLADEL 183

Query: 216 INAAKGSSNSYAIKKKDEIERVAKANR 242
           INAAKGSSNSYAIKKKDEIERVAKANR
Sbjct: 184 INAAKGSSNSYAIKKKDEIERVAKANR 207

[Close]

BLAST of Clc11G01220 vs. TAIR 10
Match: AT3G11940.1 (ribosomal protein 5A )

HSP 1 Score: 354.0 bits (907), Expect = 9.6e-98
Identity = 183/207 (88.41%), Postives = 195/207 (94.20%), Query Frame = 0


Query: 36  AVEVDV-VNQELTQPHHDVKLFNRWTFDDVQVNDISLVDYIGVAPAKHATYVPHTAGRYS 95
           A +VD  + Q LT   ++VKLFNRWT+DDV V DISLVDYIGV  AKHAT+VPHTAGRYS
Sbjct: 4   AADVDAEIQQALT---NEVKLFNRWTYDDVTVTDISLVDYIGVQAAKHATFVPHTAGRYS 63

Query: 96  VKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIIKHAMEIIHLLTDLNPIQVIVDAVV 155
           VKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRI+KHAMEIIHLL+DLNPIQVI+DA+V
Sbjct: 64  VKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAMEIIHLLSDLNPIQVIIDAIV 123

Query: 156 NSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGAREAAFRNIKTIAECLADEL 215
           NSGPREDATRIGSAGVVRRQAVDISPLRRVNQAI+L+TTGAREAAFRNIKTIAECLADEL
Sbjct: 124 NSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIFLITTGAREAAFRNIKTIAECLADEL 183

Query: 216 INAAKGSSNSYAIKKKDEIERVAKANR 242
           INAAKGSSNSYAIKKKDEIERVAKANR
Sbjct: 184 INAAKGSSNSYAIKKKDEIERVAKANR 207

[Close]

BLAST of Clc11G01220 vs. TAIR 10
Match: AT3G11940.2 (ribosomal protein 5A )

HSP 1 Score: 354.0 bits (907), Expect = 9.6e-98
Identity = 183/207 (88.41%), Postives = 195/207 (94.20%), Query Frame = 0


Query: 36  AVEVDV-VNQELTQPHHDVKLFNRWTFDDVQVNDISLVDYIGVAPAKHATYVPHTAGRYS 95
           A +VD  + Q LT   ++VKLFNRWT+DDV V DISLVDYIGV  AKHAT+VPHTAGRYS
Sbjct: 4   AADVDAEIQQALT---NEVKLFNRWTYDDVTVTDISLVDYIGVQAAKHATFVPHTAGRYS 63

Query: 96  VKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIIKHAMEIIHLLTDLNPIQVIVDAVV 155
           VKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRI+KHAMEIIHLL+DLNPIQVI+DA+V
Sbjct: 64  VKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAMEIIHLLSDLNPIQVIIDAIV 123

Query: 156 NSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGAREAAFRNIKTIAECLADEL 215
           NSGPREDATRIGSAGVVRRQAVDISPLRRVNQAI+L+TTGAREAAFRNIKTIAECLADEL
Sbjct: 124 NSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIFLITTGAREAAFRNIKTIAECLADEL 183

Query: 216 INAAKGSSNSYAIKKKDEIERVAKANR 242
           INAAKGSSNSYAIKKKDEIERVAKANR
Sbjct: 184 INAAKGSSNSYAIKKKDEIERVAKANR 207

[Close]

BLAST of Clc11G01220 vs. TAIR 10
Match: ATCG00900.1 (Ribosomal protein S7p/S5e family protein )

HSP 1 Score: 55.8 bits (133), Expect = 5.4e-08
Identity = 48/136 (35.29%), Postives = 74/136 (54.41%), Query Frame = 0


Query: 108 RLTNSLMMHGRNNGKKLMAVRIIKHAMEIIHLLTDLNPIQVIVDAVVNSGP--REDATRI 167
           RL N L+     +GKK +A +II  A++ I   T+ NP+ V+  A+    P     A R+
Sbjct: 21  RLVNMLVNRILKHGKKSLAYQIIYRALKKIQQKTETNPLSVLRQAIRGVTPDIAVKARRV 80

Query: 168 GSAGVVRRQAVDISPLRRVNQAIYLLTTGAREAAFRNIKTIAECLADELINAAKGSSNSY 227
           G  G   +  ++I   +    AI  L   +R+   RN   +A  L+ EL++AAKGS +  
Sbjct: 81  G--GSTHQVPIEIGSTQGKALAIRWLLGASRKRPGRN---MAFKLSSELVDAAKGSGD-- 140

Query: 228 AIKKKDEIERVAKANR 242
           AI+KK+E  R+A+ANR
Sbjct: 141 AIRKKEETHRMAEANR 149

The following BLAST results are available for this feature:

BLAST of Clc11G01220 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038888890.1	5.4e-111	100.00	40S ribosomal protein S5-like isoform X1 [Benincasa hispida]	[more]
XP_008447164.1	1.2e-110	97.66	PREDICTED: 40S ribosomal protein S5-like isoform X1 [Cucumis melo]	[more]
XP_008456864.1	2.7e-110	97.66	PREDICTED: 40S ribosomal protein S5-like [Cucumis melo]	[more]
KAE8652818.1	6.0e-110	96.30	hypothetical protein Csa_022860 [Cucumis sativus]	[more]
XP_038888891.1	5.1e-109	100.00	40S ribosomal protein S5-like isoform X2 [Benincasa hispida] >XP_038888892.1 40S...	[more]

BLAST of Clc11G01220 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9ZUT9	1.2e-97	88.41	40S ribosomal protein S5-1 OS=Arabidopsis thaliana OX=3702 GN=RPS5A PE=1 SV=1	[more]
O65731	2.7e-97	94.74	40S ribosomal protein S5 (Fragment) OS=Cicer arietinum OX=3827 GN=RPS5 PE=2 SV=1	[more]
P51427	1.4e-96	88.41	40S ribosomal protein S5-2 OS=Arabidopsis thaliana OX=3702 GN=RPS5B PE=1 SV=2	[more]
Q5E988	2.9e-83	81.05	40S ribosomal protein S5 OS=Bos taurus OX=9913 GN=RPS5 PE=2 SV=3	[more]
P46782	2.9e-83	81.05	40S ribosomal protein S5 OS=Homo sapiens OX=9606 GN=RPS5 PE=1 SV=4	[more]

BLAST of Clc11G01220 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3BGS9	5.9e-111	97.66	40S ribosomal protein S5-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC103489682...	[more]
A0A1S3C3S7	1.3e-110	97.66	40S ribosomal protein S5-like OS=Cucumis melo OX=3656 GN=LOC103496679 PE=3 SV=1	[more]
A0A5A7SN17	2.5e-109	100.00	40S ribosomal protein S5-like isoform X1 OS=Cucumis melo var. makuwa OX=1194695 ...	[more]
A0A5D3D3Q1	3.2e-109	99.52	40S ribosomal protein S5-like isoform X2 OS=Cucumis melo var. makuwa OX=1194695 ...	[more]
A0A1S3BGS8	3.2e-109	99.52	40S ribosomal protein S5-like isoform X2 OS=Cucumis melo OX=3656 GN=LOC103489682...	[more]

BLAST of Clc11G01220 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G37270.1	8.7e-99	88.41	ribosomal protein 5B	[more]
AT2G37270.2	8.7e-99	88.41	ribosomal protein 5B	[more]
AT3G11940.1	9.6e-98	88.41	ribosomal protein 5A	[more]
AT3G11940.2	9.6e-98	88.41	ribosomal protein 5A	[more]
ATCG00900.1	5.4e-08	35.29	Ribosomal protein S7p/S5e family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR036823	Ribosomal protein S7 domain superfamily	GENE3D	1.10.455.10	Ribosomal protein S7 domain	coord: 34..241 e-value: 1.5E-96 score: 323.8
IPR036823	Ribosomal protein S7 domain superfamily	SUPERFAMILY	47973	Ribosomal protein S7	coord: 54..241
IPR000235	Ribosomal protein S5/S7	PIRSF	PIRSF002122	RPS7p_RPS7a_RPS5e_RPS7o	coord: 25..241 e-value: 5.0E-40 score: 135.5
IPR000235	Ribosomal protein S5/S7	PANTHER	PTHR11205	RIBOSOMAL PROTEIN S7	coord: 35..241
IPR023798	Ribosomal protein S7 domain	PFAM	PF00177	Ribosomal_S7	coord: 95..241 e-value: 9.3E-37 score: 126.0
IPR005716	Ribosomal protein S5/S7, eukaryotic/archaeal	TIGRFAM	TIGR01028	TIGR01028	coord: 53..241 e-value: 7.1E-90 score: 297.6
IPR005716	Ribosomal protein S5/S7, eukaryotic/archaeal	CDD	cd14867	uS7_Eukaryote	coord: 54..241 e-value: 3.12363E-138 score: 383.828
None	No IPR available	PANTHER	PTHR11205:SF36	40S RIBOSOMAL PROTEIN S5	coord: 35..241
IPR020606	Ribosomal protein S7, conserved site	PROSITE	PS00052	RIBOSOMAL_S7	coord: 107..133

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Clc11G01220.2	Clc11G01220.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0000028	ribosomal small subunit assembly
biological_process	GO:0006412	translation
cellular_component	GO:0022627	cytosolic small ribosomal subunit
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0015935	small ribosomal subunit
molecular_function	GO:0003729	mRNA binding
molecular_function	GO:0019843	rRNA binding
molecular_function	GO:0003735	structural constituent of ribosome
molecular_function	GO:0003723	RNA binding