Clc09G10970 (gene) Watermelon (cordophanus) v2

Overview


Name	Clc09G10970
Type	gene
Organism	Citrullus lanatus subsp. cordophanus cv. cordophanus (Watermelon (cordophanus) v2)
Description	Unknown protein
Location	ClcChr09: 9711330 .. 9714054 (-)
RNA-Seq Expression	Clc09G10970
Synteny	Clc09G10970

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTAAATATAGCCAAATCTATTAATAATAATAATGAGAAAAAAAAAAAGGAAAACAAGAAAAAAAGGGAACTTGGTTTCATCTTCTTCCCCTCTCCCACACAGCCGCCGCCCCCTTGCTCAGTCTCGTCCGCCGGCGACTGCGCAGCAAACCCACAAGCAGCGGCGGTGACCATAGACTCCGGCGAACTGTCTTTGTGCATCAGACGTAGCGCTCTTGCGCGTTCCGTTGCTCGACGATCGACGGCGGTGGTAGGAAGCCCACACATCTAGCTTGCGACGCGGGCACCCACTTCAGACGCCCTTGCTCAGACCTTCGAAACAACGTGTCTTTCCGTTTCGACGGGTTTCGGCGCTGACCCACACCCCGATTGGTCTCAAATCAGTTTACCCATAACTTTTAAGGTTCAGTTCTGCATGTTCGATTGTTTTTTAACACCAACCAGCAAGGATCAGAGCCTTTTCGGTAAGATTTTGTAAGGATAGTTGCTTTAATTTTCGTTTCGAATTCAATTTAAGTGTTCAATAATTCTGAATCACTAGAACTCATCGGCTGTTATGTTTGGGTGTTTAATTAGGTTTCATAAGTATTAAACATGCTTTGAGCCGTTTCAGACTCAATTAATGCATGGTAGGCTAGTCTTTGACTTGTGAAAGTTCAGTTTTGGGCTTATTCGGAGTGATTGGTTAAGGTTTATGGTTGATTTTAGATATGAATGTCACTCTCTCGATTTCAGTTAAGGTTTTTGAATTGAGTTCAAATTTTTAAACTCTGTCTTGATTGTTTAGACCTCGAGGAAGTTGACATTTATTTAAAAGTGAATTTTGAATTGAGAATTGTAGGATGGTCATTCCACATCCATTCCAAAATATAAATTTTAGTTTAATTATGTTTTTACTATTGTGATTTGACAAATATTTGAAAGTATGTTTTGAATGTTTGGAAGTGAAATGGAAATTGATTGAAATTGTTTTGTATGTTTTAGTGGTTTTTGCTAAGTAAGAGTACTTGACTGTCTTGAAAGATTTTTGGAAGTGTTTTGATTGACTTCGAATTATCAGTGTTTCTGGTTTTGTTACTTCTGAAAAATTATTGAAAAGTTTGATTGGTTTAATCTGATGAATTCTCATGTTGAAATTGTCATTGAACTATATGTTTTGTTTGAGATGTTTATGAAAGAATTTGACAATTTGTTCAATTTGATAGGGCTACTCAGATATGCCAAATTATGTTTTGGGGATTGTATGCTTATTTGTTGTAGTAGCCAAAATAGGATTTGACCGTATGTGATCTGTTTGAAACTTATTTGTGAGAAGGCATTTTTTAGTGGTTTGGCATTCCTTTGGAACGAAGATTCATGTGTGTGTGTTGCACTCATACGGTCTTGCACTTAAGTAATTGACTATTGTTTTTGTCGACTGCTAATCGACATCTTTGACTGAATTAATGAATGACTGGTGTTACCAATGGGTAACCACATATGTCTGAGCTACTTCAACTATGCATCTTTCCTTCCCTGTAACTGAAGTGTTGATTGATTGAAAGAGTTCTAACTGATTGAAAGTGCAAATCGTTTGAAGGTTTTGTTTTGTTTAAAGTATTGAATGTTTTGGTTTTATTGAAAAGTTTATTGAAAAGCACCTGCAGAGATACAAATATGATAGCACATAACCATACATCAATTTCTAACAAGCTAAGATACAGATATGTTGAGAATCATTTTTTTTAAAAAAAAATCTAGGATATATGTAAATTTAATAAAAAAATATCAAATGTAATCCACTAAAAAGCATAAAATGTAAGTTAATGTCAATAGTACAAAATACAACACAAACACTAAAATACAATACAGAAAGCAACATCAGTGATATTGAAATACAATAGTCAATAGAATACAATAGAAAATGTTGGTGGGGCACCGAAGTTAGATTGATCAGAGAAGAAGAAGATTAGTGGGAGAAGTAGGAAGATTGGTGAAAGACTTCTTTGTTGAATGGTTGAAGATATTTAAGTGGATTATTTTTGTGTGACTTTGTGAGGGACTTAGGGATGAAGATAAATATTAGATGATTCCAGGTTTTTTTTTTCTTTTTTTGGGCGGTGAACTTTAATTTTTAAATAGGCTGCTTAGTTTTGGACTGGGAAAGATTAGATAAGTTGCTATTCCTTTTTATTATAAAGGTCTAATGTGTCCCCTTCATATCTGGAAAGAGACAGGCATATCCAATAGGGTTGGTAGAAAAACTTGCAGGGTCGAGAAATCCTCGGTTTGACTGGGGATGGGGTCAAACCAAGGACCTTTTCCGGGTACCCGTCCGAGGATGGGGCAGGGATGGGGAGGGTATCCTGCCTCGACTCCGACCCCGATCCCGACCCCGAATCCCCGACACCAACTTGGTCCAAATAAAAATTAATTTTATATATATAAAAGATGTTATGGTTGACTCTTTGCGCTCTTGCTCTCGCTCTCCCATCCTTTCCTCCCTCACAATCACTCTATCTCTCTCGCTCTCTCTCGCTCGCTCTCGCTCTCTCTCGCTCTCTCTTGGGGAATGGGTCCCCGACGAGGAATCCCCATCCCCATCCCTGCCCCCGCTTACAAATGGCGAGGACGGGGGCGGGGATGGGGGTAAATTCCCCCCACAGGGGCGGGGACGGGGAACCCCCACCTGCCTTACCCCGGCCCCGTTGCCAACCCTAGCATCCAATATATTACGTATCTAA

mRNA sequence

ATGCCGCCGCCCCCTTGCTCAGTCTCGTCCGCCGGCGACTGCGCAGCAAACCCACAAGCAGCGGCGGTGACCATAGACTCCGGCGAACTGTCTTTGTGCATCAGACGTAGCGCTCTTGCGCACGCCCTTGCTCAGACCTTCGAAACAACGTGTCTTTCCGTTTCGACGGGTTTCGGCGCTGACCCACACCCCGATTGGTCTCAAATCAGTTTACCCATAACTTTTAAGGTTCAGTTCTGCATGTTCGATTGTTTTTTAACACCAACCAGCAAGGATCAGAGCCTTTTCGGGTCGAGAAATCCTCGGTTTGACTGGGGATGGGGTCAAACCAAGGACCTTTTCCGGGTACCCGTCCGAGGATGGGGCAGGGATGGGGAGGGTATCCTGCCTCGACTCCGACCCCGATCCCGACCCCGAATCCCCGACACCAACTTGGTCCAAATAAAAATTAATTTTATATATATAAAAGATGTTATGGTTGACTCTTTGCGCTCTTGCTCTCGCTCTCCCATCCTTTCCTCCCTCACAATCACTCTATCTCTCTCGCTCTCTCTCGCTCGCTCTCGCTCTCTCTCGCTCTCTCTTGGGGAATGGGTCCCCGACGAGGAATCCCCATCCCCATCCCTGCCCCCGCTTACAAATGGCGAGGACGGGGGCGGGGATGGGGGTAAATTCCCCCCACAGGGGCGGGGACGGGGAACCCCCACCTGCCTTACCCCGGCCCCGTTGCCAACCCTAGCATCCAATATATTACGTATCTAA

Coding sequence (CDS)

ATGCCGCCGCCCCCTTGCTCAGTCTCGTCCGCCGGCGACTGCGCAGCAAACCCACAAGCAGCGGCGGTGACCATAGACTCCGGCGAACTGTCTTTGTGCATCAGACGTAGCGCTCTTGCGCACGCCCTTGCTCAGACCTTCGAAACAACGTGTCTTTCCGTTTCGACGGGTTTCGGCGCTGACCCACACCCCGATTGGTCTCAAATCAGTTTACCCATAACTTTTAAGGTTCAGTTCTGCATGTTCGATTGTTTTTTAACACCAACCAGCAAGGATCAGAGCCTTTTCGGGTCGAGAAATCCTCGGTTTGACTGGGGATGGGGTCAAACCAAGGACCTTTTCCGGGTACCCGTCCGAGGATGGGGCAGGGATGGGGAGGGTATCCTGCCTCGACTCCGACCCCGATCCCGACCCCGAATCCCCGACACCAACTTGGTCCAAATAAAAATTAATTTTATATATATAAAAGATGTTATGGTTGACTCTTTGCGCTCTTGCTCTCGCTCTCCCATCCTTTCCTCCCTCACAATCACTCTATCTCTCTCGCTCTCTCTCGCTCGCTCTCGCTCTCTCTCGCTCTCTCTTGGGGAATGGGTCCCCGACGAGGAATCCCCATCCCCATCCCTGCCCCCGCTTACAAATGGCGAGGACGGGGGCGGGGATGGGGGTAAATTCCCCCCACAGGGGCGGGGACGGGGAACCCCCACCTGCCTTACCCCGGCCCCGTTGCCAACCCTAGCATCCAATATATTACGTATCTAA

Protein sequence

MPPPPCSVSSAGDCAANPQAAAVTIDSGELSLCIRRSALAHALAQTFETTCLSVSTGFGADPHPDWSQISLPITFKVQFCMFDCFLTPTSKDQSLFGSRNPRFDWGWGQTKDLFRVPVRGWGRDGEGILPRLRPRSRPRIPDTNLVQIKINFIYIKDVMVDSLRSCSRSPILSSLTITLSLSLSLARSRSLSLSLGEWVPDEESPSPSLPPLTNGEDGGGDGGKFPPQGRGRGTPTCLTPAPLPTLASNILRI

Homology

The following BLAST results are available for this feature:

BLAST of Clc09G10970 vs.


Match Name	E-value	Identity	Description

BLAST of Clc09G10970 vs.


Match Name	E-value	Identity	Description

BLAST of Clc09G10970 vs.


Match Name	E-value	Identity	Description

BLAST of Clc09G10970 vs.


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 197..243

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Clc09G10970.1	Clc09G10970.1	mRNA