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Sequences
The following sequences are available for this feature:
Gene sequence (with intron) Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. ATGGTGGTGAAAATGAGGGAAATGAATGTGGAAATGGAAATTCAGATGCATGAGGTGGTGATGATGCTTATCGCCGCCGCCGCCGAACCCCATCGGAAGAATGTGAAGGTAGGGTTAAAGAGAAAAGGGCCAAGGGTGGGAAGAGGAGATTGCGAGGGTGAAGAGAGTGAAAGAGGAATGCGTGAAGGAGGAAGGGATATTACTCATTGA mRNA sequence ATGGTGGTGAAAATGAGGGAAATGAATGTGGAAATGGAAATTCAGATGCATGAGGTGGTGATGATGCTTATCGCCGCCGCCGCCGAACCCCATCGGAAGAATGTGAAGGTAGGGTTAAAGAGAAAAGGGCCAAGGGTGGGAAGAGGAGATTGCGAGGGTGAAGAGAGTGAAAGAGGAATGCGTGAAGGAGGAAGGGATATTACTCATTGA Coding sequence (CDS) ATGGTGGTGAAAATGAGGGAAATGAATGTGGAAATGGAAATTCAGATGCATGAGGTGGTGATGATGCTTATCGCCGCCGCCGCCGAACCCCATCGGAAGAATGTGAAGGTAGGGTTAAAGAGAAAAGGGCCAAGGGTGGGAAGAGGAGATTGCGAGGGTGAAGAGAGTGAAAGAGGAATGCGTGAAGGAGGAAGGGATATTACTCATTGA Protein sequence MVVKMREMNVEMEIQMHEVVMMLIAAAAEPHRKNVKVGLKRKGPRVGRGDCEGEESERGMREGGRDITH
Homology
BLAST of Cla97C01G000160 vs. NCBI nr
Match: KGN49831.1 (hypothetical protein Csa_000699 [Cucumis sativus]) HSP 1 Score: 91.3 bits (225), Expect = 3.6e-15 Identity = 53/69 (76.81%), Postives = 58/69 (84.06%), Query Frame = 0
Query: 1 MVVKMREMNVEMEIQMHEVVMMLIAAAAEPHRKNVKVGLKRKGPRVGRGDCEGEESERGM 60
MVVKMREMNVEMEI+M EV+MM++ A E HRK VKV LKRKGPR+ RGD EGEESERGM
Sbjct: 32 MVVKMREMNVEMEIEMQEVLMMML-VATETHRKKVKV-LKRKGPRMVRGDSEGEESERGM 91
Query: 61 REGGRDITH 70
EGGRDI H
Sbjct: 92 SEGGRDIGH 98
BLAST of Cla97C01G000160 vs. ExPASy TrEMBL
Match: A0A0A0KQ31 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G139105 PE=4 SV=1) HSP 1 Score: 91.3 bits (225), Expect = 1.7e-15 Identity = 53/69 (76.81%), Postives = 58/69 (84.06%), Query Frame = 0
Query: 1 MVVKMREMNVEMEIQMHEVVMMLIAAAAEPHRKNVKVGLKRKGPRVGRGDCEGEESERGM 60
MVVKMREMNVEMEI+M EV+MM++ A E HRK VKV LKRKGPR+ RGD EGEESERGM
Sbjct: 32 MVVKMREMNVEMEIEMQEVLMMML-VATETHRKKVKV-LKRKGPRMVRGDSEGEESERGM 91
Query: 61 REGGRDITH 70
EGGRDI H
Sbjct: 92 SEGGRDIGH 98
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| KGN49831.1 | 3.6e-15 | 76.81 | hypothetical protein Csa_000699 [Cucumis sativus] | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| Match Name | E-value | Identity | Description | |
|---|
| A0A0A0KQ31 | 1.7e-15 | 76.81 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G139105 PE=4 SV=1 | [more] |
| Match Name | E-value | Identity | Description | |
|---|
InterPro
Analysis Name: InterPro Annotations of Watermelon (97103) v2.5
Date Performed: 2022-01-31
| IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
|---|
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 36..69 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 43..69 |
Relationships
The following mRNA feature(s) are a part of this gene:
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