Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonfive_prime_UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
TGGACACTAGATTAAATTCTAATTATTATTGTAAGATAAAAGTATATATAGTTTAGTTAATCATACAAACCAGAAATTGGCAATTGTATATCCAAAATGTTATTTGTATATATAAGGGAAATTGTAATGCTGTTTACGTGTTTGTATATGAATGATCCTTGTAACTACAATCGCCATTTGCACACCTTTTTCTGTGCCCCTCTGATTCAGATGCCATTTGGGTCTATTTCATTGCCCTTCTCTTTCTCTGCTTTCTTCCACAGCCCACGTTTCTTCCCAATCATCCATGGCGGACGCCAAGGTCTCAATCCTCCCTCCTCTGATCTTCTCTCTTTTTTTCCTTTCATTTTTTGGGTTTAATTTCTTGTCTCCGTTCTTGCTCAGCTTAATTCTAAATTTGGGTTTGAAATTTTGATGCAGGTTGTGGTCATGGTTCTTAAGGTAGACCTCCACTGCGATCGCTGCTACAAGAAAGTCAAGAAAGTTCTCTGCAAATTCCATCGTCAGTTTCTTCTTCTTAATTCCCCTTTCTCTGTTTTTTTTTTTTTTTTTTTGATTAATTTTGCCCAACTGAGACTCTGTTTTTCGTTTGAGCATCAGAAATTCGAGACCAGATGTATGATGAGAAACAGAATCTTGTGATCATCAAAGTGGTTTGCTGTAATCCTGAGAGGCTTAGAGATAAAATTTGCTGTAAGGGTTGTGGGGTTATCAAGAGTATTGAAATCAAGCCCGCCGATCCTCCTCCGGTCAAAAAACCCGACCCTCCACCGCCGGTCAAAAAACCCGACCCTCCACCGCCGGTCAAAAAACCCGACCCTCCACCGCCGGTCAAAAAACCCGACCCTCCACCGCCGGTCAAAAAACCCGACCCTCCACCGCCGGTCAAAAAACCAGACCCTCCACCGCCGGTAAAAAAACCCGACCCTCCACCGCCGGTGGTCGTCCCGAATCCCCCTCCGGTTCAGCCGGTGGCGGTGAATATATGCGTTCCGGTTCACGGGTACCCGCCGGCATACCCGATGGGCCTGTGTTGCAGGCAGTGCTACCGAGGGCAGGGCGGGGGCCCATGTTTGAGCGAGTATGGGCGACCCGACCCATGTTGCGATGGGTGTGCTTCTGGAAGGCCCATTTACGATAGCTACGGCGGAGGGGGAGCCTGTTACGTTGCCCACTGTCAATATCTGAATGAAGAAAATGCGTCCGGGTGCAGTGTTATGTGA
mRNA sequence
TGGACACTAGATTAAATTCTAATTATTATTGTAAGATAAAAGTATATATAGTTTAGTTAATCATACAAACCAGAAATTGGCAATTGTATATCCAAAATGTTATTTGTATATATAAGGGAAATTGTAATGCTGTTTACGTGTTTGTATATGAATGATCCTTGTAACTACAATCGCCATTTGCACACCTTTTTCTGTGCCCCTCTGATTCAGATGCCATTTGGGTCTATTTCATTGCCCTTCTCTTTCTCTGCTTTCTTCCACAGCCCACGTTTCTTCCCAATCATCCATGGCGGACGCCAAGGTTGTGGTCATGGTTCTTAAGGTAGACCTCCACTGCGATCGCTGCTACAAGAAAGTCAAGAAAGTTCTCTGCAAATTCCATCAAATTCGAGACCAGATGTATGATGAGAAACAGAATCTTGTGATCATCAAAGTGGTTTGCTGTAATCCTGAGAGGCTTAGAGATAAAATTTGCTGTAAGGGTTGTGGGGTTATCAAGAGTATTGAAATCAAGCCCGCCGATCCTCCTCCGGTCAAAAAACCCGACCCTCCACCGCCGGTCAAAAAACCCGACCCTCCACCGCCGGTCAAAAAACCCGACCCTCCACCGCCGGTCAAAAAACCCGACCCTCCACCGCCGGTCAAAAAACCCGACCCTCCACCGCCGGTCAAAAAACCAGACCCTCCACCGCCGGTAAAAAAACCCGACCCTCCACCGCCGGTGGTCGTCCCGAATCCCCCTCCGGTTCAGCCGGTGGCGGTGAATATATGCGTTCCGGTTCACGGGTACCCGCCGGCATACCCGATGGGCCTGTGTTGCAGGCAGTGCTACCGAGGGCAGGGCGGGGGCCCATGTTTGAGCGAGTATGGGCGACCCGACCCATGTTGCGATGGGTGTGCTTCTGGAAGGCCCATTTACGATAGCTACGGCGGAGGGGGAGCCTGTTACGTTGCCCACTGTCAATATCTGAATGAAGAAAATGCGTCCGGGTGCAGTGTTATGTGA
Coding sequence (CDS)
ATGGCGGACGCCAAGGTTGTGGTCATGGTTCTTAAGGTAGACCTCCACTGCGATCGCTGCTACAAGAAAGTCAAGAAAGTTCTCTGCAAATTCCATCAAATTCGAGACCAGATGTATGATGAGAAACAGAATCTTGTGATCATCAAAGTGGTTTGCTGTAATCCTGAGAGGCTTAGAGATAAAATTTGCTGTAAGGGTTGTGGGGTTATCAAGAGTATTGAAATCAAGCCCGCCGATCCTCCTCCGGTCAAAAAACCCGACCCTCCACCGCCGGTCAAAAAACCCGACCCTCCACCGCCGGTCAAAAAACCCGACCCTCCACCGCCGGTCAAAAAACCCGACCCTCCACCGCCGGTCAAAAAACCCGACCCTCCACCGCCGGTCAAAAAACCAGACCCTCCACCGCCGGTAAAAAAACCCGACCCTCCACCGCCGGTGGTCGTCCCGAATCCCCCTCCGGTTCAGCCGGTGGCGGTGAATATATGCGTTCCGGTTCACGGGTACCCGCCGGCATACCCGATGGGCCTGTGTTGCAGGCAGTGCTACCGAGGGCAGGGCGGGGGCCCATGTTTGAGCGAGTATGGGCGACCCGACCCATGTTGCGATGGGTGTGCTTCTGGAAGGCCCATTTACGATAGCTACGGCGGAGGGGGAGCCTGTTACGTTGCCCACTGTCAATATCTGAATGAAGAAAATGCGTCCGGGTGCAGTGTTATGTGA
Protein sequence
MADAKVVVMVLKVDLHCDRCYKKVKKVLCKFHQIRDQMYDEKQNLVIIKVVCCNPERLRDKICCKGCGVIKSIEIKPADPPPVKKPDPPPPVKKPDPPPPVKKPDPPPPVKKPDPPPPVKKPDPPPPVKKPDPPPPVKKPDPPPPVVVPNPPPVQPVAVNICVPVHGYPPAYPMGLCCRQCYRGQGGGPCLSEYGRPDPCCDGCASGRPIYDSYGGGGACYVAHCQYLNEENASGCSVM
Homology
BLAST of Sed0007136 vs. NCBI nr
Match:
XP_023520688.1 (leucine-rich repeat extensin-like protein 3 isoform X2 [Cucurbita pepo subsp. pepo])
HSP 1 Score: 323.6 bits (828), Expect = 1.5e-84
Identity = 199/282 (70.57%), Postives = 208/282 (73.76%), Query Frame = 0
Query: 1 MADAKVVVMVLKVDLHCDRCYKKVKKVLCKFHQIRDQMYDEKQNLVIIKVVCCNPERLRD 60
MADAK VVM+LKVDL CDRCYKKVKKVLCKF QIRDQ+YDEKQNLVIIKVVCCNPE+LRD
Sbjct: 1 MADAKTVVMLLKVDLQCDRCYKKVKKVLCKFPQIRDQIYDEKQNLVIIKVVCCNPEKLRD 60
Query: 61 KICCKGCGVIKSIEIKPADPPPVKKPDPPPPVK-------KPDPPPPVKKPDPPPPVKKP 120
KICCKGCGVIKSIEIKPADPPP KKPDPPPP K KPDPPPP KK DPPPP P
Sbjct: 61 KICCKGCGVIKSIEIKPADPPPPKKPDPPPPKKADPPPPAKPDPPPP-KKADPPPPKADP 120
Query: 121 DPP-----PPVKKPDPPPPVKKPDP------PPPVKKPDPPPPVVVPNPP---------- 180
PP PP KK DPPPP KK DP PPP KK DPPPP P PP
Sbjct: 121 PPPKKADLPPPKKADPPPP-KKADPPPPKADPPPPKKADPPPPKAEPPPPKKADPPPAPK 180
Query: 181 ----------PV-----QPVAVNICVPVHGYPPAYPMGLCCRQCYRGQGGGPCLSEYGRP 240
PV +P VNICVPV GYPPAYP+G+CC QCY GQGGGPC S +GRP
Sbjct: 181 ADPPPPKKVDPVPPAQPEPFPVNICVPVPGYPPAYPIGMCCSQCYEGQGGGPCYSGFGRP 240
BLAST of Sed0007136 vs. NCBI nr
Match:
XP_022927598.1 (leucine-rich repeat extensin-like protein 3 isoform X12 [Cucurbita moschata])
HSP 1 Score: 322.4 bits (825), Expect = 3.3e-84
Identity = 197/266 (74.06%), Postives = 205/266 (77.07%), Query Frame = 0
Query: 1 MADA-KVVVMVLKVDLHCDRCYKKVKKVLCKFHQIRDQMYDEKQNLVIIKVVCCNPERLR 60
MADA K VVM+LKVDL CDRCYKKVKKVLCKF QIRDQ+YDEKQNLVIIKVVCCNPE+LR
Sbjct: 1 MADAKKTVVMMLKVDLQCDRCYKKVKKVLCKFPQIRDQIYDEKQNLVIIKVVCCNPEKLR 60
Query: 61 DKICCKGCGVIKSIEIKPADPPPVKKPDPPPPVK-------KPDPPPPVKKPDP------ 120
DKICCKGCGVIKSIEIKPADPPP KKPDPPPP K KPDPPPP KK DP
Sbjct: 61 DKICCKGCGVIKSIEIKPADPPPPKKPDPPPPKKADPPPPAKPDPPPP-KKADPPPPKAD 120
Query: 121 PPPVKKPDP------PPPVKKPDPPPPVKKPDP-----PPPVKKPDPPPPVVVPNPPPVQ 180
PPP KK DP PPP KK DPPPP P P PPP K DPPPP V PP Q
Sbjct: 121 PPPPKKADPPPPKADPPPPKKADPPPPKADPPPPKKADPPPAPKADPPPPKKVDPVPPAQ 180
Query: 181 --PVAVNICVPVHGYPPAYPMGLCCRQCYRGQGGGPCLSEYGRPDPCCDGCASGRPIYDS 240
P VNICVPV GYPPAYP+G+CC QCY GQGGGPC S +GRP PCCDGCASGRPIYDS
Sbjct: 181 PEPFPVNICVPVPGYPPAYPIGMCCSQCYEGQGGGPCYSGFGRPGPCCDGCASGRPIYDS 240
BLAST of Sed0007136 vs. NCBI nr
Match:
XP_022973160.1 (leucine-rich repeat extensin-like protein 3 isoform X4 [Cucurbita maxima])
HSP 1 Score: 322.4 bits (825), Expect = 3.3e-84
Identity = 197/273 (72.16%), Postives = 207/273 (75.82%), Query Frame = 0
Query: 1 MADA-KVVVMVLKVDLHCDRCYKKVKKVLCKFHQIRDQMYDEKQNLVIIKVVCCNPERLR 60
MADA KVVVM+LKVDL CDRCYKKVKKVLCKF QIRDQ+YDEKQNLVIIKVVCCNPE+LR
Sbjct: 1 MADAKKVVVMMLKVDLQCDRCYKKVKKVLCKFPQIRDQIYDEKQNLVIIKVVCCNPEKLR 60
Query: 61 DKICCKGCGVIKSIEIKPADPPPVKKPDPPPPVK------KPDPPPPVKKPDPPPPVKKP 120
DKICCKGCGVIKSIEIKPADPPP KKPDPPPP K KPDPPPP KK DPPPP P
Sbjct: 61 DKICCKGCGVIKSIEIKPADPPPPKKPDPPPPKKADPPPAKPDPPPP-KKADPPPPKADP 120
Query: 121 DPP-----PPVKKPDP------PPPVKKPDP------PPPVKKPDPPPPVVVPNPPP--- 180
PP PP KK DP PPP KK DP PPP KK DPPPP PPP
Sbjct: 121 PPPKKADAPPPKKADPPPPKADPPPPKKADPPPPKADPPPPKKADPPPPAKADPPPPKKV 180
Query: 181 -------VQPVAVNICVPVHGYPPAYPMGLCCRQCYRGQGGGPCLSEYGRPDPCCDGCAS 240
+P VN+CVPV GYPPAYP+G+CC QCY GQGGGPC S +GRP PCCDGCAS
Sbjct: 181 DPLPPAQPEPFPVNMCVPVPGYPPAYPIGMCCSQCYEGQGGGPCYSGFGRPGPCCDGCAS 240
BLAST of Sed0007136 vs. NCBI nr
Match:
XP_022927597.1 (leucine-rich repeat extensin-like protein 3 isoform X11 [Cucurbita moschata])
HSP 1 Score: 320.9 bits (821), Expect = 9.6e-84
Identity = 200/274 (72.99%), Postives = 208/274 (75.91%), Query Frame = 0
Query: 1 MADA-KVVVMVLKVDLHCDRCYKKVKKVLCKFHQIRDQMYDEKQNLVIIKVVCCNPERLR 60
MADA K VVM+LKVDL CDRCYKKVKKVLCKF QIRDQ+YDEKQNLVIIKVVCCNPE+LR
Sbjct: 1 MADAKKTVVMMLKVDLQCDRCYKKVKKVLCKFPQIRDQIYDEKQNLVIIKVVCCNPEKLR 60
Query: 61 DKICCKGCGVIKSIEIKPADPPPVKKPDPPPPVK-------KPDPPPPVKKPDP------ 120
DKICCKGCGVIKSIEIKPADPPP KKPDPPPP K KPDPPPP KK DP
Sbjct: 61 DKICCKGCGVIKSIEIKPADPPPPKKPDPPPPKKADPPPPAKPDPPPP-KKADPPPPKAD 120
Query: 121 PPPVKKPDP------PPPVKKPDP------PPPVKKPDPPPPVK-------KPDPPPPVV 180
PPP KK DP PPP KK DP PPP KK DPPPP K K DPPPP
Sbjct: 121 PPPPKKADPPPPKADPPPPKKADPPPPKADPPPPKKADPPPPKKADPPPAPKADPPPPKK 180
Query: 181 VPNPPPVQ--PVAVNICVPVHGYPPAYPMGLCCRQCYRGQGGGPCLSEYGRPDPCCDGCA 240
V PP Q P VNICVPV GYPPAYP+G+CC QCY GQGGGPC S +GRP PCCDGCA
Sbjct: 181 VDPVPPAQPEPFPVNICVPVPGYPPAYPIGMCCSQCYEGQGGGPCYSGFGRPGPCCDGCA 240
BLAST of Sed0007136 vs. NCBI nr
Match:
XP_022927595.1 (protein PYRICULARIA ORYZAE RESISTANCE 21-like isoform X10 [Cucurbita moschata])
HSP 1 Score: 320.5 bits (820), Expect = 1.3e-83
Identity = 200/275 (72.73%), Postives = 208/275 (75.64%), Query Frame = 0
Query: 1 MADA-KVVVMVLKVDLHCDRCYKKVKKVLCKFHQIRDQMYDEKQNLVIIKVVCCNPERLR 60
MADA K VVM+LKVDL CDRCYKKVKKVLCKF QIRDQ+YDEKQNLVIIKVVCCNPE+LR
Sbjct: 1 MADAKKTVVMMLKVDLQCDRCYKKVKKVLCKFPQIRDQIYDEKQNLVIIKVVCCNPEKLR 60
Query: 61 DKICCKGCGVIKSIEIKPADPPPVKKPDPPPPVK-------KPDPPPPVKKPDP------ 120
DKICCKGCGVIKSIEIKPADPPP KKPDPPPP K KPDPPPP KK DP
Sbjct: 61 DKICCKGCGVIKSIEIKPADPPPPKKPDPPPPKKADPPPPAKPDPPPP-KKADPPPPKAD 120
Query: 121 PPPVKKPDP------PPPVKKPDP-------PPPVKKPDPPPPVK-------KPDPPPPV 180
PPP KK DP PPP KK DP PPP KK DPPPP K K DPPPP
Sbjct: 121 PPPPKKADPPPPKADPPPPKKADPPPPKKADPPPPKKADPPPPKKADPPPAPKADPPPPK 180
Query: 181 VVPNPPPVQ--PVAVNICVPVHGYPPAYPMGLCCRQCYRGQGGGPCLSEYGRPDPCCDGC 240
V PP Q P VNICVPV GYPPAYP+G+CC QCY GQGGGPC S +GRP PCCDGC
Sbjct: 181 KVDPVPPAQPEPFPVNICVPVPGYPPAYPIGMCCSQCYEGQGGGPCYSGFGRPGPCCDGC 240
BLAST of Sed0007136 vs. ExPASy TrEMBL
Match:
A0A6J1IAN1 (leucine-rich repeat extensin-like protein 3 isoform X4 OS=Cucurbita maxima OX=3661 GN=LOC111471668 PE=4 SV=1)
HSP 1 Score: 322.4 bits (825), Expect = 1.6e-84
Identity = 197/273 (72.16%), Postives = 207/273 (75.82%), Query Frame = 0
Query: 1 MADA-KVVVMVLKVDLHCDRCYKKVKKVLCKFHQIRDQMYDEKQNLVIIKVVCCNPERLR 60
MADA KVVVM+LKVDL CDRCYKKVKKVLCKF QIRDQ+YDEKQNLVIIKVVCCNPE+LR
Sbjct: 1 MADAKKVVVMMLKVDLQCDRCYKKVKKVLCKFPQIRDQIYDEKQNLVIIKVVCCNPEKLR 60
Query: 61 DKICCKGCGVIKSIEIKPADPPPVKKPDPPPPVK------KPDPPPPVKKPDPPPPVKKP 120
DKICCKGCGVIKSIEIKPADPPP KKPDPPPP K KPDPPPP KK DPPPP P
Sbjct: 61 DKICCKGCGVIKSIEIKPADPPPPKKPDPPPPKKADPPPAKPDPPPP-KKADPPPPKADP 120
Query: 121 DPP-----PPVKKPDP------PPPVKKPDP------PPPVKKPDPPPPVVVPNPPP--- 180
PP PP KK DP PPP KK DP PPP KK DPPPP PPP
Sbjct: 121 PPPKKADAPPPKKADPPPPKADPPPPKKADPPPPKADPPPPKKADPPPPAKADPPPPKKV 180
Query: 181 -------VQPVAVNICVPVHGYPPAYPMGLCCRQCYRGQGGGPCLSEYGRPDPCCDGCAS 240
+P VN+CVPV GYPPAYP+G+CC QCY GQGGGPC S +GRP PCCDGCAS
Sbjct: 181 DPLPPAQPEPFPVNMCVPVPGYPPAYPIGMCCSQCYEGQGGGPCYSGFGRPGPCCDGCAS 240
BLAST of Sed0007136 vs. ExPASy TrEMBL
Match:
A0A6J1ELG0 (leucine-rich repeat extensin-like protein 3 isoform X12 OS=Cucurbita moschata OX=3662 GN=LOC111434373 PE=4 SV=1)
HSP 1 Score: 322.4 bits (825), Expect = 1.6e-84
Identity = 197/266 (74.06%), Postives = 205/266 (77.07%), Query Frame = 0
Query: 1 MADA-KVVVMVLKVDLHCDRCYKKVKKVLCKFHQIRDQMYDEKQNLVIIKVVCCNPERLR 60
MADA K VVM+LKVDL CDRCYKKVKKVLCKF QIRDQ+YDEKQNLVIIKVVCCNPE+LR
Sbjct: 1 MADAKKTVVMMLKVDLQCDRCYKKVKKVLCKFPQIRDQIYDEKQNLVIIKVVCCNPEKLR 60
Query: 61 DKICCKGCGVIKSIEIKPADPPPVKKPDPPPPVK-------KPDPPPPVKKPDP------ 120
DKICCKGCGVIKSIEIKPADPPP KKPDPPPP K KPDPPPP KK DP
Sbjct: 61 DKICCKGCGVIKSIEIKPADPPPPKKPDPPPPKKADPPPPAKPDPPPP-KKADPPPPKAD 120
Query: 121 PPPVKKPDP------PPPVKKPDPPPPVKKPDP-----PPPVKKPDPPPPVVVPNPPPVQ 180
PPP KK DP PPP KK DPPPP P P PPP K DPPPP V PP Q
Sbjct: 121 PPPPKKADPPPPKADPPPPKKADPPPPKADPPPPKKADPPPAPKADPPPPKKVDPVPPAQ 180
Query: 181 --PVAVNICVPVHGYPPAYPMGLCCRQCYRGQGGGPCLSEYGRPDPCCDGCASGRPIYDS 240
P VNICVPV GYPPAYP+G+CC QCY GQGGGPC S +GRP PCCDGCASGRPIYDS
Sbjct: 181 PEPFPVNICVPVPGYPPAYPIGMCCSQCYEGQGGGPCYSGFGRPGPCCDGCASGRPIYDS 240
BLAST of Sed0007136 vs. ExPASy TrEMBL
Match:
A0A6J1EHM2 (leucine-rich repeat extensin-like protein 3 isoform X11 OS=Cucurbita moschata OX=3662 GN=LOC111434373 PE=4 SV=1)
HSP 1 Score: 320.9 bits (821), Expect = 4.6e-84
Identity = 200/274 (72.99%), Postives = 208/274 (75.91%), Query Frame = 0
Query: 1 MADA-KVVVMVLKVDLHCDRCYKKVKKVLCKFHQIRDQMYDEKQNLVIIKVVCCNPERLR 60
MADA K VVM+LKVDL CDRCYKKVKKVLCKF QIRDQ+YDEKQNLVIIKVVCCNPE+LR
Sbjct: 1 MADAKKTVVMMLKVDLQCDRCYKKVKKVLCKFPQIRDQIYDEKQNLVIIKVVCCNPEKLR 60
Query: 61 DKICCKGCGVIKSIEIKPADPPPVKKPDPPPPVK-------KPDPPPPVKKPDP------ 120
DKICCKGCGVIKSIEIKPADPPP KKPDPPPP K KPDPPPP KK DP
Sbjct: 61 DKICCKGCGVIKSIEIKPADPPPPKKPDPPPPKKADPPPPAKPDPPPP-KKADPPPPKAD 120
Query: 121 PPPVKKPDP------PPPVKKPDP------PPPVKKPDPPPPVK-------KPDPPPPVV 180
PPP KK DP PPP KK DP PPP KK DPPPP K K DPPPP
Sbjct: 121 PPPPKKADPPPPKADPPPPKKADPPPPKADPPPPKKADPPPPKKADPPPAPKADPPPPKK 180
Query: 181 VPNPPPVQ--PVAVNICVPVHGYPPAYPMGLCCRQCYRGQGGGPCLSEYGRPDPCCDGCA 240
V PP Q P VNICVPV GYPPAYP+G+CC QCY GQGGGPC S +GRP PCCDGCA
Sbjct: 181 VDPVPPAQPEPFPVNICVPVPGYPPAYPIGMCCSQCYEGQGGGPCYSGFGRPGPCCDGCA 240
BLAST of Sed0007136 vs. ExPASy TrEMBL
Match:
A0A6J1EPF0 (protein PYRICULARIA ORYZAE RESISTANCE 21-like isoform X10 OS=Cucurbita moschata OX=3662 GN=LOC111434373 PE=4 SV=1)
HSP 1 Score: 320.5 bits (820), Expect = 6.1e-84
Identity = 200/275 (72.73%), Postives = 208/275 (75.64%), Query Frame = 0
Query: 1 MADA-KVVVMVLKVDLHCDRCYKKVKKVLCKFHQIRDQMYDEKQNLVIIKVVCCNPERLR 60
MADA K VVM+LKVDL CDRCYKKVKKVLCKF QIRDQ+YDEKQNLVIIKVVCCNPE+LR
Sbjct: 1 MADAKKTVVMMLKVDLQCDRCYKKVKKVLCKFPQIRDQIYDEKQNLVIIKVVCCNPEKLR 60
Query: 61 DKICCKGCGVIKSIEIKPADPPPVKKPDPPPPVK-------KPDPPPPVKKPDP------ 120
DKICCKGCGVIKSIEIKPADPPP KKPDPPPP K KPDPPPP KK DP
Sbjct: 61 DKICCKGCGVIKSIEIKPADPPPPKKPDPPPPKKADPPPPAKPDPPPP-KKADPPPPKAD 120
Query: 121 PPPVKKPDP------PPPVKKPDP-------PPPVKKPDPPPPVK-------KPDPPPPV 180
PPP KK DP PPP KK DP PPP KK DPPPP K K DPPPP
Sbjct: 121 PPPPKKADPPPPKADPPPPKKADPPPPKKADPPPPKKADPPPPKKADPPPAPKADPPPPK 180
Query: 181 VVPNPPPVQ--PVAVNICVPVHGYPPAYPMGLCCRQCYRGQGGGPCLSEYGRPDPCCDGC 240
V PP Q P VNICVPV GYPPAYP+G+CC QCY GQGGGPC S +GRP PCCDGC
Sbjct: 181 KVDPVPPAQPEPFPVNICVPVPGYPPAYPIGMCCSQCYEGQGGGPCYSGFGRPGPCCDGC 240
BLAST of Sed0007136 vs. ExPASy TrEMBL
Match:
A0A6J1IDR1 (leucine-rich repeat extensin-like protein 3 isoform X3 OS=Cucurbita maxima OX=3661 GN=LOC111471668 PE=4 SV=1)
HSP 1 Score: 319.7 bits (818), Expect = 1.0e-83
Identity = 197/280 (70.36%), Postives = 207/280 (73.93%), Query Frame = 0
Query: 1 MADA-KVVVMVLKVDLHCDRCYKKVKKVLCKFHQIRDQMYDEKQNLVIIKVVCCNPERLR 60
MADA KVVVM+LKVDL CDRCYKKVKKVLCKF QIRDQ+YDEKQNLVIIKVVCCNPE+LR
Sbjct: 1 MADAKKVVVMMLKVDLQCDRCYKKVKKVLCKFPQIRDQIYDEKQNLVIIKVVCCNPEKLR 60
Query: 61 DKICCKGCGVIKSIEIKPADPPPVKKPDPPPPVK------KPDPPPPVK------KPDPP 120
DKICCKGCGVIKSIEIKPADPPP KKPDPPPP K KPDPPPP K K DPP
Sbjct: 61 DKICCKGCGVIKSIEIKPADPPPPKKPDPPPPKKADPPPAKPDPPPPKKADPPPPKADPP 120
Query: 121 -------PPVKKPDP------PPPVKKPDPPPPVKKPDP-----PPPVKKPDPPPPVVVP 180
PP KK DP PPP KK DPPPP P P PPP KK DPPPP
Sbjct: 121 PPKKADAPPPKKADPPPPKADPPPPKKADPPPPKADPPPPKKADPPPPKKADPPPPAKAD 180
Query: 181 NPPP----------VQPVAVNICVPVHGYPPAYPMGLCCRQCYRGQGGGPCLSEYGRPDP 240
PPP +P VN+CVPV GYPPAYP+G+CC QCY GQGGGPC S +GRP P
Sbjct: 181 PPPPKKVDPLPPAQPEPFPVNMCVPVPGYPPAYPIGMCCSQCYEGQGGGPCYSGFGRPGP 240
BLAST of Sed0007136 vs. TAIR 10
Match:
AT4G16380.1 (Heavy metal transport/detoxification superfamily protein )
HSP 1 Score: 124.4 bits (311), Expect = 1.2e-28
Identity = 114/254 (44.88%), Postives = 142/254 (55.91%), Query Frame = 0
Query: 5 KVVVMVLKVDLHCDRCYKKVKKVLCKFHQIRDQMYDEKQNLVIIKVVCCNPERLRDKICC 64
KV +M LKVDL C +CYKKVKKVLCKF QIRDQ++DEK N+VIIKVVCC+PER+ DK+C
Sbjct: 8 KVTMMKLKVDLDCAKCYKKVKKVLCKFPQIRDQLFDEKSNIVIIKVVCCSPERIMDKLCS 67
Query: 65 KGCGVIKSIEIKPADPPPVKKPDPPP------PVKKPDPPPPVKKPDPPPPVKKPDPPPP 124
KG G IK+IEI PP +P PP K P+ P +KP P +K+P+ P
Sbjct: 68 KGGGSIKTIEIVEPPKPPQPQPQQPPQKPKDAQPKAPEKPKEPEKPKQPEKLKEPEKPKQ 127
Query: 125 VKKPDPPPPVKKPDP-----PPPVKKPDPPPPVVVPNPPPVQPVAVNICVPVHGYPPAYP 184
+KP P K+P P P P KP P P P P P QP +P+ P P
Sbjct: 128 PEKPKEPEKTKQPAPAPAPAPAPAAKP-APAPAPAPAPAPKQPGPPPQAIPM--MPQGQP 187
Query: 185 MGLCCRQCYRGQGGGPCLSEYGRPDPCCDGCASGRPIYDSYGGG--------GACYVAHC 240
+CC Y G GGP + YG P + GRP+Y+S+GGG C+V C
Sbjct: 188 -AMCCGPYYDGY-GGPAFNGYGMPPQPYE--CYGRPVYESWGGGCPPPPPAYRQCHVTRC 247
BLAST of Sed0007136 vs. TAIR 10
Match:
AT4G16380.2 (Heavy metal transport/detoxification superfamily protein )
HSP 1 Score: 84.3 bits (207), Expect = 1.4e-16
Identity = 92/226 (40.71%), Postives = 119/226 (52.65%), Query Frame = 0
Query: 33 QIRDQMYDEKQNLVIIKVVCCNPERLRDKICCKGCGVIKSIEIKPADPPPVKKPDPPP-- 92
+IRDQ++DEK N+VIIKVVCC+PER+ DK+C KG G IK+IEI PP +P PP
Sbjct: 15 EIRDQLFDEKSNIVIIKVVCCSPERIMDKLCSKGGGSIKTIEIVEPPKPPQPQPQQPPQK 74
Query: 93 ----PVKKPDPPPPVKKPDPPPPVKKPDPPPPVKKPDPPPPVKKPDP-----PPPVKKPD 152
K P+ P +KP P +K+P+ P +KP P K+P P P P KP
Sbjct: 75 PKDAQPKAPEKPKEPEKPKQPEKLKEPEKPKQPEKPKEPEKTKQPAPAPAPAPAPAAKP- 134
Query: 153 PPPPVVVPNPPPVQPVAVNICVPVHGYPPAYPMGLCCRQCYRGQGGGPCLSEYGRPDPCC 212
P P P P P QP +P+ P P +CC Y G GGP + YG P
Sbjct: 135 APAPAPAPAPAPKQPGPPPQAIPM--MPQGQP-AMCCGPYYDGY-GGPAFNGYGMPPQPY 194
Query: 213 DGCASGRPIYDSYGGG--------GACYVAHCQYLNEENASGCSVM 240
+ GRP+Y+S+GGG C+V C Y +EEN CS+M
Sbjct: 195 E--CYGRPVYESWGGGCPPPPPAYRQCHVTRCDYFSEENPQSCSIM 233
BLAST of Sed0007136 vs. TAIR 10
Match:
AT1G51090.1 (Heavy metal transport/detoxification superfamily protein )
HSP 1 Score: 65.5 bits (158), Expect = 6.8e-11
Identity = 63/129 (48.84%), Postives = 81/129 (62.79%), Query Frame = 0
Query: 5 KVVVMVLKVDLHCDRCYKKVKKVLCKFHQIRDQMYDEKQNLVIIKVVCCNPERLRDKICC 64
KVV+M LKVDL+C +CYKKVKK + KF QI D+++DEK N +IIKVVC +PERL +K+C
Sbjct: 4 KVVMMKLKVDLNCSKCYKKVKKAIRKFPQITDELFDEKSNTIIIKVVCYDPERLMNKLCY 63
Query: 65 KGCGVIKSIEIKPADPPPVKKPDPPPPVKKPDPPPPVKKPDPPPPVKKPDPPPPVKKPDP 124
KG G IKSI I +PP +P P PP +KP P P P + +P P P +
Sbjct: 64 KGDGSIKSIVI--LEPPKPPQPQPQPP-QKPTAPAPAPAQAQAPALVRPAPVPVLVSSSA 123
Query: 125 PPPVKKPDP 134
P P+ P
Sbjct: 124 PQPMPMWQP 129
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| XP_023520688.1 | 1.5e-84 | 70.57 | leucine-rich repeat extensin-like protein 3 isoform X2 [Cucurbita pepo subsp. pe... | [more] |
| XP_022927598.1 | 3.3e-84 | 74.06 | leucine-rich repeat extensin-like protein 3 isoform X12 [Cucurbita moschata] | [more] |
| XP_022973160.1 | 3.3e-84 | 72.16 | leucine-rich repeat extensin-like protein 3 isoform X4 [Cucurbita maxima] | [more] |
| XP_022927597.1 | 9.6e-84 | 72.99 | leucine-rich repeat extensin-like protein 3 isoform X11 [Cucurbita moschata] | [more] |
| XP_022927595.1 | 1.3e-83 | 72.73 | protein PYRICULARIA ORYZAE RESISTANCE 21-like isoform X10 [Cucurbita moschata] | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| Match Name | E-value | Identity | Description | |
|---|
| A0A6J1IAN1 | 1.6e-84 | 72.16 | leucine-rich repeat extensin-like protein 3 isoform X4 OS=Cucurbita maxima OX=36... | [more] |
| A0A6J1ELG0 | 1.6e-84 | 74.06 | leucine-rich repeat extensin-like protein 3 isoform X12 OS=Cucurbita moschata OX... | [more] |
| A0A6J1EHM2 | 4.6e-84 | 72.99 | leucine-rich repeat extensin-like protein 3 isoform X11 OS=Cucurbita moschata OX... | [more] |
| A0A6J1EPF0 | 6.1e-84 | 72.73 | protein PYRICULARIA ORYZAE RESISTANCE 21-like isoform X10 OS=Cucurbita moschata ... | [more] |
| A0A6J1IDR1 | 1.0e-83 | 70.36 | leucine-rich repeat extensin-like protein 3 isoform X3 OS=Cucurbita maxima OX=36... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| AT4G16380.1 | 1.2e-28 | 44.88 | Heavy metal transport/detoxification superfamily protein | [more] |
| AT4G16380.2 | 1.4e-16 | 40.71 | Heavy metal transport/detoxification superfamily protein | [more] |
| AT1G51090.1 | 6.8e-11 | 48.84 | Heavy metal transport/detoxification superfamily protein | [more] |
