CmUC10G193930 (gene) Watermelon (USVL531) v1

Overview


Name	CmUC10G193930
Type	gene
Organism	Citrullus mucosospermus (Watermelon (USVL531) v1)
Description	60S ribosomal protein L6
Location	CmU531Chr10: 25104091 .. 25107121 (-)
RNA-Seq Expression	CmUC10G193930
Synteny	CmUC10G193930

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAGCCTAGAAGTGTTTCGGCAAGCAGGGGAGAGGAGACGACGCTGCCAAATTCTCAGAAATTCATCAATGGCTCCGAAGACAGCAAGAGTTAGCCGAAACCCCGATCTCATTCGAGGGGTTGGCAAATACTCGAGGTCCAAGATGTACCATAAGCGAGGTCTCTGGGCAATCAAGGCAAAAAATGGAGGTGTCTTTCCTCGCCACGATGCCAAGCCTAAGGCCGACACTCCAGCGGAGAAGCCGCCGAAATTTTACCCTGCCGACGATGTCAAGAAACCACTTGTCAACAAGCGCAAGGCTAAGCCCACCAAACTTAGGTAGATCTCTCCCAGTGTTCTTTCTTTGCCTGTTCTTTTAACTGCAGTGTCTTGGAACTTATAATGTTTGCTGTTCTTTCAACTTTGGTATGGTTGGGAAACCGAGGCATTGGAGTAAATTGTAGAATGGACAATGTAAAACCTCGATATGGGTATTCTTTTTTTATGATTAGAGGAGGGAAAATCGAGTTCATGCCGTAGCTATGAAAAAAAAAAAAAAAGAATTTTTACACCTGGGTGACTGCCATAAAAGATAGATTTATTTTGCACTTGATTTGAGTTTTCGGTTTTGAATGCGTGAAGTGAAGTAATATTGTTCAGTTTCCAAATAATAAACATTGGGTCCAGTTCAATTAATTATTCTGTTTGCAGGTCTAGCATTACTCCTGGAACTGTGCTTATCATTCTTACTGGAAGGTTCAAGGGAAAGAGAGTTGTGTTCTTGAAGCAACTTCCATCTGGCTTGCTTTTAGTGACTGGTGAGTTTTGAGGATTTTCTCTAATTTCCTTTCTTTATAATTTTTTATGTACTATCACAACGCGTTGGGGGTTGGGAGGTTTCATTATCTGTTAATGGGGATTGAGTTTTCTTTTCTTTACATTCATTGTGTACTTTGTATTAGGTTTGCGTTGGAAGTCTCATATCTTAGCATCTTAACAATTGTTTGCTTTAGGTTTACATATTATCTTAAAATGTGTTGCCTGCATATTGTTTACCTTTGAGAAATAAGTAGGATTCTTTGAGTTTTACATTTTGGTAGTATTAATAGTTTATCCTTGCAATCAAATTATATTGAAATGTCTCGTGCCTTTCATTCTGCTCATATGCCCTGCCAATGGTCTTTACATACCGCTGAAATGTTCATGGCTCCTATTCTGACTATGTGCTGTGCCATTGGTCTTTACATGTCTCAAGTTAGAGGATAAACTATTAGTACTACCAAAATGTCCAAAGAAAGTGAGCTTCTTTACTTGGCAAGTTCTACATGAGCAAGTGAACACTTTGGATCGGCTTTTGAGGAGGATGCTTCTCTAGTGGGCCCTTTATGTTGTATTCTCCATCAGGAGGCGGAGGAAAACTTGGATTACATCCTATGGAGATGTGAGTTCATGCACTCTGTTTGAAATTTGTTCTTCCAGACATTTGGTTTTGTGCTCGCCTGTTAGAGGGACATTAGTATTGTGATCGGGGAGTTCCTACTTCATTTAGCCTTACACGAAAGGTTGCTTCTAGTGGTTGGCAAGGGTGCGTGTTATCATTCAGAATCTAAAGGAACGACTGAGTGTTAACCAGTATGGGTTGGCCTAGTAGTAAATGCAAGCTTGGGTTTCATATAGGGCTAAGAGGTAATAAGTTCAATCCATGGTGGCCACCTACCTAGGTTTTAATGTCCTACCAGTTTCCTTGACACCCAAATGTTGTAGGATCAGGCGGGTTGTCTCATGAGATTAGTTGAGATGCGCCTAAGCTAACTCAGACACTCACGAATATAATAGAGAACAAAAGAACAACAAAGTGTTTAGAGAGTTGGATAAGGAGCCTAGTGACGTTTGTGTCATTAGGTTTCATGTTTCGCAAAGGGTTTCTAATTCGAAGTTTGTTTTTCTGTAGTTATTCTATAAGCACTATTTTGATTAATTGGGCCCCGTTCTTTAATGGGGTTCTCTTTCTGGGAGCTTGGTCTTGTATTCCTTCAATTTTTCTCAATGAAAGCAGCTATTGTATCAAAAACATGACTTGAGTTTCTAAGCTTCACATGTAACATCTTTTACTATTCTCTTCTGATGGTTGTGGGTAGGGGGTGGGGTTTGGCTTGGTGATGTGGATTGTAGTGTATGTTTGGAAGAAGGGATGCCTATAACGTAGTGATTAGATGTGGTATTGGATTTTAAATCTGCAATTCTTGGACCTGCTAGGGATTATCTGAATTTAAAGTTTGTCATTTTAGGTCCATTCAAGGTCAATGGTGTTCCTTTGAGGCGTGTGAATCAGTCATATGTGATAGCGACCTCCACCAAGGTGGACATTGCTGGAGTGAATGTGGAGAAGTTTGATGACAAATATTTCTCCAAGGAAGTCCAAAAGAAGAAAAAGAAGGGAGAAGGAGAATTTTTTGAGGCAGAGAAGGAGGTTTGTAGTTGTTTTTAATCATTTTTTTCTTCAAATACTTTAAGTTTGATAATTTCTTTGTCCTAATTTCTGTTCACCATTGTTACATGTAGGAAAAAAGTGCACTTCCACAGGACAAAAAAGATGATCAGAAGGCCGTGGACTCAGCTCTGCTAAAGTCCATTGAGGCAGTCTCAGACTTAAAGACCTACTTAGCTGCAAGGTTTTCCCTAAAGGCAGGCATGAAACCACACGAACTTGTTTTCTAGATATTTATCTCTTTGGTGCTGATACTTTCCTTGTGGAATTTGATCCCTACAATCTTCTTGTTCATGTTTTGTTATGGGGATTCTAGATTTGAAATTATGCTTCGCAATAAATTTTGCAGTGAACTTTTATTCATCAAATTTTGCGTTATGTAGCTTCCTTTGACCACTGATGGTGATAAGATTTGTACTTTTTCTTCAATTGTATCATTGTCTTCTAGCTGAAGAAACACTTGAGAGAATCATTTGAAAAGAAGCCATGGTGCATAGCCATATATGGTTAGTCTTCAACGAGTTACTATTAGGCCTATGGATGCTCGAGTCTCAAATATTTGTG

mRNA sequence

AAGCCTAGAAGTGTTTCGGCAAGCAGGGGAGAGGAGACGACGCTGCCAAATTCTCAGAAATTCATCAATGGCTCCGAAGACAGCAAGAGTTAGCCGAAACCCCGATCTCATTCGAGGGGTTGGCAAATACTCGAGGTCCAAGATGTACCATAAGCGAGGTCTCTGGGCAATCAAGGCAAAAAATGGAGGTGTCTTTCCTCGCCACGATGCCAAGCCTAAGGCCGACACTCCAGCGGAGAAGCCGCCGAAATTTTACCCTGCCGACGATGTCAAGAAACCACTTGTCAACAAGCGCAAGGCTAAGCCCACCAAACTTAGTGTCTTGGAACTTATAATGTTTGCTGTTCTTTCAACTTTGGTATGGTTGGGAAACCGAGGCATTGGAGTAAATTGTAGAATGGACAATGTAAAACCTCGATATGGGTCTAGCATTACTCCTGGAACTGTGCTTATCATTCTTACTGGAAGGTTCAAGGGAAAGAGAGTTGTGTTCTTGAAGCAACTTCCATCTGGCTTGCTTTTAGTGACTGGTCCATTCAAGGTCAATGGTGTTCCTTTGAGGCGTGTGAATCAGTCATATGTGATAGCGACCTCCACCAAGGTGGACATTGCTGGAGTGAATGTGGAGAAGTTTGATGACAAATATTTCTCCAAGGAAGTCCAAAAGAAGAAAAAGAAGGGAGAAGGAGAATTTTTTGAGGCAGAGAAGGAGGAAAAAAGTGCACTTCCACAGGACAAAAAAGATGATCAGAAGGCCGTGGACTCAGCTCTGCTAAAGTCCATTGAGGCAGTCTCAGACTTAAAGACCTACTTAGCTGCAAGGTTTTCCCTAAAGGCAGGCATGAAACCACACGAACTTGTTTTCTAGATATTTATCTCTTTGGTGCTGATACTTTCCTTGTGGAATTTGATCCCTACAATCTTCTTGTTCATGTTTTGTTATGGGGATTCTAGATTTGAAATTATGCTTCGCAATAAATTTTGCAGTGAACTTTTATTCATCAAATTTTGCGTTATGTAGCTTCCTTTGACCACTGATGGTGATAAGATTTGTACTTTTTCTTCAATTGTATCATTGTCTTCTAGCTGAAGAAACACTTGAGAGAATCATTTGAAAAGAAGCCATGGTGCATAGCCATATATGGTTAGTCTTCAACGAGTTACTATTAGGCCTATGGATGCTCGAGTCTCAAATATTTGTG

Coding sequence (CDS)

ATGGCTCCGAAGACAGCAAGAGTTAGCCGAAACCCCGATCTCATTCGAGGGGTTGGCAAATACTCGAGGTCCAAGATGTACCATAAGCGAGGTCTCTGGGCAATCAAGGCAAAAAATGGAGGTGTCTTTCCTCGCCACGATGCCAAGCCTAAGGCCGACACTCCAGCGGAGAAGCCGCCGAAATTTTACCCTGCCGACGATGTCAAGAAACCACTTGTCAACAAGCGCAAGGCTAAGCCCACCAAACTTAGTGTCTTGGAACTTATAATGTTTGCTGTTCTTTCAACTTTGGTATGGTTGGGAAACCGAGGCATTGGAGTAAATTGTAGAATGGACAATGTAAAACCTCGATATGGGTCTAGCATTACTCCTGGAACTGTGCTTATCATTCTTACTGGAAGGTTCAAGGGAAAGAGAGTTGTGTTCTTGAAGCAACTTCCATCTGGCTTGCTTTTAGTGACTGGTCCATTCAAGGTCAATGGTGTTCCTTTGAGGCGTGTGAATCAGTCATATGTGATAGCGACCTCCACCAAGGTGGACATTGCTGGAGTGAATGTGGAGAAGTTTGATGACAAATATTTCTCCAAGGAAGTCCAAAAGAAGAAAAAGAAGGGAGAAGGAGAATTTTTTGAGGCAGAGAAGGAGGAAAAAAGTGCACTTCCACAGGACAAAAAAGATGATCAGAAGGCCGTGGACTCAGCTCTGCTAAAGTCCATTGAGGCAGTCTCAGACTTAAAGACCTACTTAGCTGCAAGGTTTTCCCTAAAGGCAGGCATGAAACCACACGAACTTGTTTTCTAG

Protein sequence

MAPKTARVSRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKADTPAEKPPKFYPADDVKKPLVNKRKAKPTKLSVLELIMFAVLSTLVWLGNRGIGVNCRMDNVKPRYGSSITPGTVLIILTGRFKGKRVVFLKQLPSGLLLVTGPFKVNGVPLRRVNQSYVIATSTKVDIAGVNVEKFDDKYFSKEVQKKKKKGEGEFFEAEKEEKSALPQDKKDDQKAVDSALLKSIEAVSDLKTYLAARFSLKAGMKPHELVF

Homology

[Close]

BLAST of CmUC10G193930 vs. NCBI nr
Match: XP_022935449.1 (60S ribosomal protein L6-1-like [Cucurbita moschata] >KAG6581596.1 60S ribosomal protein L6, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 418.7 bits (1075), Expect = 3.8e-113
Identity = 225/266 (84.59%), Postives = 228/266 (85.71%), Query Frame = 0


Query: 1   MAPKTARVSRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKADTPAEKPP 60
           MAPKTARVSRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDA+PK D PAEKPP
Sbjct: 1   MAPKTARVSRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAQPKTDAPAEKPP 60

Query: 61  KFYPADDVKKPLVNKRKAKPTKLSVLELIMFAVLSTLVWLGNRGIGVNCRMDNVKPRYGS 120
           KFYPADDVKKPLVNKRKAKPTKL                                    S
Sbjct: 61  KFYPADDVKKPLVNKRKAKPTKLR-----------------------------------S 120

Query: 121 SITPGTVLIILTGRFKGKRVVFLKQLPSGLLLVTGPFKVNGVPLRRVNQSYVIATSTKVD 180
           SITPGTVLIILTGRFKGKRVVFLKQLPSGLLLVTGPFKVNGVPLRRVNQSYVIATSTKVD
Sbjct: 121 SITPGTVLIILTGRFKGKRVVFLKQLPSGLLLVTGPFKVNGVPLRRVNQSYVIATSTKVD 180

Query: 181 IAGVNVEKFDDKYFSKEVQKKKKKGEGEFFEAEKEEKSALPQDKKDDQKAVDSALLKSIE 240
           +AGVNVEKFDDKYFSKEVQKKKKKGEGEFFEAEKEEKSALPQDKKDDQKAVDSALLKSIE
Sbjct: 181 LAGVNVEKFDDKYFSKEVQKKKKKGEGEFFEAEKEEKSALPQDKKDDQKAVDSALLKSIE 231

Query: 241 AVSDLKTYLAARFSLKAGMKPHELVF 267
           AVSDLKTYLAARFSLK+GMKPHELVF
Sbjct: 241 AVSDLKTYLAARFSLKSGMKPHELVF 231

[Close]

BLAST of CmUC10G193930 vs. NCBI nr
Match: XP_004149609.1 (60S ribosomal protein L6-2 [Cucumis sativus] >KGN58615.1 hypothetical protein Csa_001784 [Cucumis sativus])

HSP 1 Score: 417.9 bits (1073), Expect = 6.4e-113
Identity = 225/266 (84.59%), Postives = 228/266 (85.71%), Query Frame = 0


Query: 1   MAPKTARVSRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKADTPAEKPP 60
           MAPKTARVSRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKA+ PAEKPP
Sbjct: 1   MAPKTARVSRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKAEAPAEKPP 60

Query: 61  KFYPADDVKKPLVNKRKAKPTKLSVLELIMFAVLSTLVWLGNRGIGVNCRMDNVKPRYGS 120
           KFYPADDVKKP+VNKRKAKPTKL                                    S
Sbjct: 61  KFYPADDVKKPIVNKRKAKPTKLR-----------------------------------S 120

Query: 121 SITPGTVLIILTGRFKGKRVVFLKQLPSGLLLVTGPFKVNGVPLRRVNQSYVIATSTKVD 180
           SITPGTVLIILTGRFKGKRVVFLKQLPSGLLLVTGPFKVNGVPLRRVNQSYVIATSTKVD
Sbjct: 121 SITPGTVLIILTGRFKGKRVVFLKQLPSGLLLVTGPFKVNGVPLRRVNQSYVIATSTKVD 180

Query: 181 IAGVNVEKFDDKYFSKEVQKKKKKGEGEFFEAEKEEKSALPQDKKDDQKAVDSALLKSIE 240
           I GV+VEKFDDKYFSKEVQKKKKKGEGEFFEAEKEEKSALPQDKKDDQKAVDSALLKSIE
Sbjct: 181 ITGVSVEKFDDKYFSKEVQKKKKKGEGEFFEAEKEEKSALPQDKKDDQKAVDSALLKSIE 231

Query: 241 AVSDLKTYLAARFSLKAGMKPHELVF 267
           AVSDLKTYLAARFSLKAGMKPHELVF
Sbjct: 241 AVSDLKTYLAARFSLKAGMKPHELVF 231

[Close]

BLAST of CmUC10G193930 vs. NCBI nr
Match: XP_038880885.1 (60S ribosomal protein L6-1-like [Benincasa hispida])

HSP 1 Score: 417.5 bits (1072), Expect = 8.4e-113
Identity = 226/266 (84.96%), Postives = 227/266 (85.34%), Query Frame = 0


Query: 1   MAPKTARVSRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKADTPAEKPP 60
           MAPKTARVSRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKAD PAEKPP
Sbjct: 1   MAPKTARVSRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKADAPAEKPP 60

Query: 61  KFYPADDVKKPLVNKRKAKPTKLSVLELIMFAVLSTLVWLGNRGIGVNCRMDNVKPRYGS 120
           KFYPADDVKKPLVNKRK KPTKL                                    S
Sbjct: 61  KFYPADDVKKPLVNKRKPKPTKLR-----------------------------------S 120

Query: 121 SITPGTVLIILTGRFKGKRVVFLKQLPSGLLLVTGPFKVNGVPLRRVNQSYVIATSTKVD 180
           SITPGTVLIILTGRFKGKRVVFLKQL SGLLLVTGPFKVNGVPLRRVNQSYVIATSTKVD
Sbjct: 121 SITPGTVLIILTGRFKGKRVVFLKQLQSGLLLVTGPFKVNGVPLRRVNQSYVIATSTKVD 180

Query: 181 IAGVNVEKFDDKYFSKEVQKKKKKGEGEFFEAEKEEKSALPQDKKDDQKAVDSALLKSIE 240
           IAGVNVEKFDDKYFSKEVQKKKKKGEGEFFEAEKEEKSALPQDKKDDQKAVDSALLKSIE
Sbjct: 181 IAGVNVEKFDDKYFSKEVQKKKKKGEGEFFEAEKEEKSALPQDKKDDQKAVDSALLKSIE 231

Query: 241 AVSDLKTYLAARFSLKAGMKPHELVF 267
           AV+DLKTYLAARFSLKAGMKPHELVF
Sbjct: 241 AVADLKTYLAARFSLKAGMKPHELVF 231

[Close]

BLAST of CmUC10G193930 vs. NCBI nr
Match: XP_008461779.1 (PREDICTED: 60S ribosomal protein L6-1-like [Cucumis melo] >KAA0048314.1 60S ribosomal protein L6-1-like [Cucumis melo var. makuwa] >TYK10659.1 60S ribosomal protein L6-1-like [Cucumis melo var. makuwa])

HSP 1 Score: 416.0 bits (1068), Expect = 2.4e-112
Identity = 224/266 (84.21%), Postives = 226/266 (84.96%), Query Frame = 0


Query: 1   MAPKTARVSRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKADTPAEKPP 60
           MAPKTARVSRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPK + PAEKPP
Sbjct: 1   MAPKTARVSRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKPEAPAEKPP 60

Query: 61  KFYPADDVKKPLVNKRKAKPTKLSVLELIMFAVLSTLVWLGNRGIGVNCRMDNVKPRYGS 120
           KFYPADDVKKPLVNKRKAKPTKL                                    +
Sbjct: 61  KFYPADDVKKPLVNKRKAKPTKLR-----------------------------------A 120

Query: 121 SITPGTVLIILTGRFKGKRVVFLKQLPSGLLLVTGPFKVNGVPLRRVNQSYVIATSTKVD 180
           SITPGTVLIILTGRFKGKRVVFLKQLPSGLLLVTGPFKVNGVPLRRVNQSYVIATSTKVD
Sbjct: 121 SITPGTVLIILTGRFKGKRVVFLKQLPSGLLLVTGPFKVNGVPLRRVNQSYVIATSTKVD 180

Query: 181 IAGVNVEKFDDKYFSKEVQKKKKKGEGEFFEAEKEEKSALPQDKKDDQKAVDSALLKSIE 240
           I GVNVEKFDDKYFSKEVQKKKKKGEGEFFEAEKEEKSALPQDKKDDQK VDSALLKSIE
Sbjct: 181 ITGVNVEKFDDKYFSKEVQKKKKKGEGEFFEAEKEEKSALPQDKKDDQKTVDSALLKSIE 231

Query: 241 AVSDLKTYLAARFSLKAGMKPHELVF 267
           AVSDLKTYLAARFSLKAGMKPHELVF
Sbjct: 241 AVSDLKTYLAARFSLKAGMKPHELVF 231

[Close]

BLAST of CmUC10G193930 vs. NCBI nr
Match: XP_023528566.1 (60S ribosomal protein L6-1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 415.2 bits (1066), Expect = 4.2e-112
Identity = 223/266 (83.83%), Postives = 226/266 (84.96%), Query Frame = 0


Query: 1   MAPKTARVSRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKADTPAEKPP 60
           MAPK AR SRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDA+PK D PAEKPP
Sbjct: 1   MAPKAARASRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAQPKTDAPAEKPP 60

Query: 61  KFYPADDVKKPLVNKRKAKPTKLSVLELIMFAVLSTLVWLGNRGIGVNCRMDNVKPRYGS 120
           KFYPADDVKKPLVNKRKAKPTKL                                    S
Sbjct: 61  KFYPADDVKKPLVNKRKAKPTKLR-----------------------------------S 120

Query: 121 SITPGTVLIILTGRFKGKRVVFLKQLPSGLLLVTGPFKVNGVPLRRVNQSYVIATSTKVD 180
           SITPGTVLIILTGRFKGKRVVFLKQLPSGLLLVTGPFKVNGVPLRRVNQSYVIATSTKVD
Sbjct: 121 SITPGTVLIILTGRFKGKRVVFLKQLPSGLLLVTGPFKVNGVPLRRVNQSYVIATSTKVD 180

Query: 181 IAGVNVEKFDDKYFSKEVQKKKKKGEGEFFEAEKEEKSALPQDKKDDQKAVDSALLKSIE 240
           +AGVNVEKFDDKYFSKEVQKKKKKGEGEFFEAEKEEKSALPQDKKDDQKAVDSALLKSIE
Sbjct: 181 LAGVNVEKFDDKYFSKEVQKKKKKGEGEFFEAEKEEKSALPQDKKDDQKAVDSALLKSIE 231

Query: 241 AVSDLKTYLAARFSLKAGMKPHELVF 267
           AVSDLKTYLAARFSLK+GMKPHELVF
Sbjct: 241 AVSDLKTYLAARFSLKSGMKPHELVF 231

[Close]

BLAST of CmUC10G193930 vs. ExPASy Swiss-Prot
Match: Q9FZ76 (60S ribosomal protein L6-1 OS=Arabidopsis thaliana OX=3702 GN=RPL6A PE=2 SV=1)

HSP 1 Score: 355.9 bits (912), Expect = 3.9e-97
Identity = 187/265 (70.57%), Postives = 206/265 (77.74%), Query Frame = 0


Query: 2   APKTARVSRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKADTPAEKPPK 61
           A +T +V+RNPDLIRGVGKYSRS+MYHKRGLWAIKAKNGGVFPRHDA+PK D P EKP K
Sbjct: 4   AKRTPKVNRNPDLIRGVGKYSRSQMYHKRGLWAIKAKNGGVFPRHDAQPKVDAPVEKPAK 63

Query: 62  FYPADDVKKPLVNKRKAKPTKLSVLELIMFAVLSTLVWLGNRGIGVNCRMDNVKPRYGSS 121
           FYPA+DVKKPLVN+RK KPTKL                                    +S
Sbjct: 64  FYPAEDVKKPLVNRRKPKPTKLK-----------------------------------AS 123

Query: 122 ITPGTVLIILTGRFKGKRVVFLKQLPSGLLLVTGPFKVNGVPLRRVNQSYVIATSTKVDI 181
           ITPGTVLIIL GRFKGKRVVFLKQL SGLLLVTGPFK+NGVPLRRVNQ+YVI TSTK+DI
Sbjct: 124 ITPGTVLIILAGRFKGKRVVFLKQLSSGLLLVTGPFKINGVPLRRVNQAYVIGTSTKIDI 183

Query: 182 AGVNVEKFDDKYFSKEVQKKKKKGEGEFFEAEKEEKSALPQDKKDDQKAVDSALLKSIEA 241
           +GVN EKFDDKYF K  +KKKKK EGEFFEAEKEEK  +PQ+KK+DQK VD+AL+KSIEA
Sbjct: 184 SGVNTEKFDDKYFGKVAEKKKKKTEGEFFEAEKEEKKEIPQEKKEDQKTVDAALIKSIEA 233

Query: 242 VSDLKTYLAARFSLKAGMKPHELVF 267
           V +LK YL ARFSL  GMKPHELVF
Sbjct: 244 VPELKVYLGARFSLSQGMKPHELVF 233

[Close]

BLAST of CmUC10G193930 vs. ExPASy Swiss-Prot
Match: Q9C9C6 (60S ribosomal protein L6-2 OS=Arabidopsis thaliana OX=3702 GN=RPL6B PE=2 SV=1)

HSP 1 Score: 355.1 bits (910), Expect = 6.7e-97
Identity = 188/263 (71.48%), Postives = 206/263 (78.33%), Query Frame = 0


Query: 4   KTARVSRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKADTPAEKPPKFY 63
           +TA+V+RNPDLIRGVGKYSRS+MYHKRGLWAIKAKNGGVFPRHDAK K D P EKPPKFY
Sbjct: 6   RTAKVNRNPDLIRGVGKYSRSQMYHKRGLWAIKAKNGGVFPRHDAKSKVDAPVEKPPKFY 65

Query: 64  PADDVKKPLVNKRKAKPTKLSVLELIMFAVLSTLVWLGNRGIGVNCRMDNVKPRYGSSIT 123
           PA+DVKKPL N+R AKP KL                                    +SIT
Sbjct: 66  PAEDVKKPLPNRRTAKPAKLR-----------------------------------ASIT 125

Query: 124 PGTVLIILTGRFKGKRVVFLKQLPSGLLLVTGPFKVNGVPLRRVNQSYVIATSTKVDIAG 183
           PGTVLIIL GRFKGKRVVFLKQL SGLLLVTGPFK+NGVPLRRVNQ+YVI TSTKVDI+G
Sbjct: 126 PGTVLIILAGRFKGKRVVFLKQLASGLLLVTGPFKINGVPLRRVNQAYVIGTSTKVDISG 185

Query: 184 VNVEKFDDKYFSKEVQKKKKKGEGEFFEAEKEEKSALPQDKKDDQKAVDSALLKSIEAVS 243
           V ++KFDDKYF K  +KKKKK EGEFFEAEKEEK  +PQ KKDDQKAVD+AL+K+IEAV 
Sbjct: 186 VTLDKFDDKYFGKVAEKKKKKTEGEFFEAEKEEKKEIPQGKKDDQKAVDAALIKAIEAVP 233

Query: 244 DLKTYLAARFSLKAGMKPHELVF 267
           +LKTYL ARFSLK GMKPHELVF
Sbjct: 246 ELKTYLGARFSLKQGMKPHELVF 233

[Close]

BLAST of CmUC10G193930 vs. ExPASy Swiss-Prot
Match: Q9C9C5 (60S ribosomal protein L6-3 OS=Arabidopsis thaliana OX=3702 GN=RPL6C PE=2 SV=1)

HSP 1 Score: 354.4 bits (908), Expect = 1.1e-96
Identity = 188/263 (71.48%), Postives = 206/263 (78.33%), Query Frame = 0


Query: 4   KTARVSRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKADTPAEKPPKFY 63
           +T +V+RNPDLIRGVGKYSRS+MYHKRGLWAIKAKNGGVFPRHDAK K D P EKPPKFY
Sbjct: 6   RTPKVNRNPDLIRGVGKYSRSQMYHKRGLWAIKAKNGGVFPRHDAKSKVDAPVEKPPKFY 65

Query: 64  PADDVKKPLVNKRKAKPTKLSVLELIMFAVLSTLVWLGNRGIGVNCRMDNVKPRYGSSIT 123
           PA+DVKKPL N+R AKPTKL                                    +SIT
Sbjct: 66  PAEDVKKPLPNRRTAKPTKLR-----------------------------------ASIT 125

Query: 124 PGTVLIILTGRFKGKRVVFLKQLPSGLLLVTGPFKVNGVPLRRVNQSYVIATSTKVDIAG 183
           PGTVLIIL GRFKGKRVVFLKQL SGLLLVTGPFK+NGVPLRRVNQ+YVI TSTKVDI+G
Sbjct: 126 PGTVLIILAGRFKGKRVVFLKQLASGLLLVTGPFKINGVPLRRVNQAYVIGTSTKVDISG 185

Query: 184 VNVEKFDDKYFSKEVQKKKKKGEGEFFEAEKEEKSALPQDKKDDQKAVDSALLKSIEAVS 243
           V ++KFDDKYF K  +KKKKK EGEFFEAEKEEK  +PQ KKDDQKAVD+AL+K+IEAV 
Sbjct: 186 VTLDKFDDKYFGKVAEKKKKKTEGEFFEAEKEEKKEIPQVKKDDQKAVDAALIKAIEAVP 233

Query: 244 DLKTYLAARFSLKAGMKPHELVF 267
           +LKTYL ARFSLK GMKPHELVF
Sbjct: 246 ELKTYLGARFSLKQGMKPHELVF 233

[Close]

BLAST of CmUC10G193930 vs. ExPASy Swiss-Prot
Match: P34091 (60S ribosomal protein L6 OS=Mesembryanthemum crystallinum OX=3544 GN=RPL6 PE=2 SV=1)

HSP 1 Score: 347.8 bits (891), Expect = 1.1e-94
Identity = 186/259 (71.81%), Postives = 201/259 (77.61%), Query Frame = 0


Query: 8   VSRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKADTPAEKPPKFYPADD 67
           VSRNP+L+RG+GKYSRSKMYHKRGLWAIKAKNGGVFP+H  K       EKPPKFYPADD
Sbjct: 11  VSRNPELVRGIGKYSRSKMYHKRGLWAIKAKNGGVFPKHAPKSADSKAVEKPPKFYPADD 70

Query: 68  VKKPLVNKRKAKPTKLSVLELIMFAVLSTLVWLGNRGIGVNCRMDNVKPRYGSSITPGTV 127
           VKKPL+NKRK KPTKL                                    +SITPGTV
Sbjct: 71  VKKPLINKRKPKPTKLR-----------------------------------ASITPGTV 130

Query: 128 LIILTGRFKGKRVVFLKQLPSGLLLVTGPFKVNGVPLRRVNQSYVIATSTKVDIAGVNVE 187
           LIIL GRFKGKRVVFLKQL SGLLLVTGPFKVNGVPLRRVNQ+YVIATSTKVDI+GVNVE
Sbjct: 131 LIILAGRFKGKRVVFLKQLSSGLLLVTGPFKVNGVPLRRVNQAYVIATSTKVDISGVNVE 190

Query: 188 KFDDKYFSKEVQKKKKKGEGEFFEAEKEEKSALPQDKKDDQKAVDSALLKSIEAVSDLKT 247
           KFDDKYF K+ +KK KKGEGEFFEAEK+E + LPQ+KKDDQKAVD ALLK+IE V +LK 
Sbjct: 191 KFDDKYFGKKAEKKNKKGEGEFFEAEKKEVNVLPQEKKDDQKAVDVALLKAIEGVPELKA 234

Query: 248 YLAARFSLKAGMKPHELVF 267
           YL ARFSLKAGMKPHELVF
Sbjct: 251 YLGARFSLKAGMKPHELVF 234

[Close]

BLAST of CmUC10G193930 vs. ExPASy Swiss-Prot
Match: P47911 (60S ribosomal protein L6 OS=Mus musculus OX=10090 GN=Rpl6 PE=1 SV=3)

HSP 1 Score: 177.2 bits (448), Expect = 2.5e-43
Identity = 124/287 (43.21%), Postives = 159/287 (55.40%), Query Frame = 0


Query: 3   PKTAR--VSRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKAD------- 62
           PK A+   SRNP L+RG+G+YSRS MY ++ L+  K K      + + K K +       
Sbjct: 44  PKKAKPHCSRNPVLVRGIGRYSRSAMYSRKALY--KRKYSAAKTKVEKKKKKEKVLATVT 103

Query: 63  -------------TPAEKPPKFYPADDVKKPLVNKRKAKPTKLSVLELIMFAVLSTLVWL 122
                            K P++YP +DV + L++  K KP    V               
Sbjct: 104 KTVGGDKNGGTRVVKLRKMPRYYPTEDVPRKLLSHGK-KPFSQHV--------------- 163

Query: 123 GNRGIGVNCRMDNVKPRYGSSITPGTVLIILTGRFKGKRVVFLKQLPSGLLLVTGPFKVN 182
                           R  SSITPGTVLIILTGR +GKRVVFLKQL SGLLLVTGP  +N
Sbjct: 164 ---------------RRLRSSITPGTVLIILTGRHRGKRVVFLKQLDSGLLLVTGPLVIN 223

Query: 183 GVPLRRVNQSYVIATSTKVDIAGVNVEK-FDDKYFSKEVQKKKKKGEGEFFEAEKEEKSA 242
            VPLRR +Q +VIATSTKVDI+ V + K   D YF K+  +K +  EGE F+ EK EK  
Sbjct: 224 RVPLRRTHQKFVIATSTKVDISDVKIPKHLTDAYFKKKQLRKPRHQEGEIFDTEK-EKYE 283

Query: 243 LPQDKKDDQKAVDSALLKSIEAVSDLKTYLAARFSLKAGMKPHELVF 267
           + + +K DQKAVD  +L  I+AV  L+ YL ++FSL  GM PH+LVF
Sbjct: 284 ITEQRKADQKAVDLQILPKIKAVPQLQGYLRSQFSLTNGMYPHKLVF 296

[Close]

BLAST of CmUC10G193930 vs. ExPASy TrEMBL
Match: A0A6J1F5G0 (60S ribosomal protein L6 OS=Cucurbita moschata OX=3662 GN=LOC111442321 PE=3 SV=1)

HSP 1 Score: 418.7 bits (1075), Expect = 1.8e-113
Identity = 225/266 (84.59%), Postives = 228/266 (85.71%), Query Frame = 0


Query: 1   MAPKTARVSRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKADTPAEKPP 60
           MAPKTARVSRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDA+PK D PAEKPP
Sbjct: 1   MAPKTARVSRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAQPKTDAPAEKPP 60

Query: 61  KFYPADDVKKPLVNKRKAKPTKLSVLELIMFAVLSTLVWLGNRGIGVNCRMDNVKPRYGS 120
           KFYPADDVKKPLVNKRKAKPTKL                                    S
Sbjct: 61  KFYPADDVKKPLVNKRKAKPTKLR-----------------------------------S 120

Query: 121 SITPGTVLIILTGRFKGKRVVFLKQLPSGLLLVTGPFKVNGVPLRRVNQSYVIATSTKVD 180
           SITPGTVLIILTGRFKGKRVVFLKQLPSGLLLVTGPFKVNGVPLRRVNQSYVIATSTKVD
Sbjct: 121 SITPGTVLIILTGRFKGKRVVFLKQLPSGLLLVTGPFKVNGVPLRRVNQSYVIATSTKVD 180

Query: 181 IAGVNVEKFDDKYFSKEVQKKKKKGEGEFFEAEKEEKSALPQDKKDDQKAVDSALLKSIE 240
           +AGVNVEKFDDKYFSKEVQKKKKKGEGEFFEAEKEEKSALPQDKKDDQKAVDSALLKSIE
Sbjct: 181 LAGVNVEKFDDKYFSKEVQKKKKKGEGEFFEAEKEEKSALPQDKKDDQKAVDSALLKSIE 231

Query: 241 AVSDLKTYLAARFSLKAGMKPHELVF 267
           AVSDLKTYLAARFSLK+GMKPHELVF
Sbjct: 241 AVSDLKTYLAARFSLKSGMKPHELVF 231

[Close]

BLAST of CmUC10G193930 vs. ExPASy TrEMBL
Match: A0A0A0L9J7 (60S ribosomal protein L6 OS=Cucumis sativus OX=3659 GN=Csa_3G698560 PE=3 SV=1)

HSP 1 Score: 417.9 bits (1073), Expect = 3.1e-113
Identity = 225/266 (84.59%), Postives = 228/266 (85.71%), Query Frame = 0


Query: 1   MAPKTARVSRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKADTPAEKPP 60
           MAPKTARVSRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKA+ PAEKPP
Sbjct: 1   MAPKTARVSRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKAEAPAEKPP 60

Query: 61  KFYPADDVKKPLVNKRKAKPTKLSVLELIMFAVLSTLVWLGNRGIGVNCRMDNVKPRYGS 120
           KFYPADDVKKP+VNKRKAKPTKL                                    S
Sbjct: 61  KFYPADDVKKPIVNKRKAKPTKLR-----------------------------------S 120

Query: 121 SITPGTVLIILTGRFKGKRVVFLKQLPSGLLLVTGPFKVNGVPLRRVNQSYVIATSTKVD 180
           SITPGTVLIILTGRFKGKRVVFLKQLPSGLLLVTGPFKVNGVPLRRVNQSYVIATSTKVD
Sbjct: 121 SITPGTVLIILTGRFKGKRVVFLKQLPSGLLLVTGPFKVNGVPLRRVNQSYVIATSTKVD 180

Query: 181 IAGVNVEKFDDKYFSKEVQKKKKKGEGEFFEAEKEEKSALPQDKKDDQKAVDSALLKSIE 240
           I GV+VEKFDDKYFSKEVQKKKKKGEGEFFEAEKEEKSALPQDKKDDQKAVDSALLKSIE
Sbjct: 181 ITGVSVEKFDDKYFSKEVQKKKKKGEGEFFEAEKEEKSALPQDKKDDQKAVDSALLKSIE 231

Query: 241 AVSDLKTYLAARFSLKAGMKPHELVF 267
           AVSDLKTYLAARFSLKAGMKPHELVF
Sbjct: 241 AVSDLKTYLAARFSLKAGMKPHELVF 231

[Close]

BLAST of CmUC10G193930 vs. ExPASy TrEMBL
Match: A0A5D3CKB9 (60S ribosomal protein L6 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold25G00210 PE=3 SV=1)

HSP 1 Score: 416.0 bits (1068), Expect = 1.2e-112
Identity = 224/266 (84.21%), Postives = 226/266 (84.96%), Query Frame = 0


Query: 1   MAPKTARVSRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKADTPAEKPP 60
           MAPKTARVSRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPK + PAEKPP
Sbjct: 1   MAPKTARVSRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKPEAPAEKPP 60

Query: 61  KFYPADDVKKPLVNKRKAKPTKLSVLELIMFAVLSTLVWLGNRGIGVNCRMDNVKPRYGS 120
           KFYPADDVKKPLVNKRKAKPTKL                                    +
Sbjct: 61  KFYPADDVKKPLVNKRKAKPTKLR-----------------------------------A 120

Query: 121 SITPGTVLIILTGRFKGKRVVFLKQLPSGLLLVTGPFKVNGVPLRRVNQSYVIATSTKVD 180
           SITPGTVLIILTGRFKGKRVVFLKQLPSGLLLVTGPFKVNGVPLRRVNQSYVIATSTKVD
Sbjct: 121 SITPGTVLIILTGRFKGKRVVFLKQLPSGLLLVTGPFKVNGVPLRRVNQSYVIATSTKVD 180

Query: 181 IAGVNVEKFDDKYFSKEVQKKKKKGEGEFFEAEKEEKSALPQDKKDDQKAVDSALLKSIE 240
           I GVNVEKFDDKYFSKEVQKKKKKGEGEFFEAEKEEKSALPQDKKDDQK VDSALLKSIE
Sbjct: 181 ITGVNVEKFDDKYFSKEVQKKKKKGEGEFFEAEKEEKSALPQDKKDDQKTVDSALLKSIE 231

Query: 241 AVSDLKTYLAARFSLKAGMKPHELVF 267
           AVSDLKTYLAARFSLKAGMKPHELVF
Sbjct: 241 AVSDLKTYLAARFSLKAGMKPHELVF 231

[Close]

BLAST of CmUC10G193930 vs. ExPASy TrEMBL
Match: A0A1S3CFY6 (60S ribosomal protein L6 OS=Cucumis melo OX=3656 GN=LOC103500301 PE=3 SV=1)

HSP 1 Score: 416.0 bits (1068), Expect = 1.2e-112
Identity = 224/266 (84.21%), Postives = 226/266 (84.96%), Query Frame = 0


Query: 1   MAPKTARVSRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKADTPAEKPP 60
           MAPKTARVSRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPK + PAEKPP
Sbjct: 1   MAPKTARVSRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKPEAPAEKPP 60

Query: 61  KFYPADDVKKPLVNKRKAKPTKLSVLELIMFAVLSTLVWLGNRGIGVNCRMDNVKPRYGS 120
           KFYPADDVKKPLVNKRKAKPTKL                                    +
Sbjct: 61  KFYPADDVKKPLVNKRKAKPTKLR-----------------------------------A 120

Query: 121 SITPGTVLIILTGRFKGKRVVFLKQLPSGLLLVTGPFKVNGVPLRRVNQSYVIATSTKVD 180
           SITPGTVLIILTGRFKGKRVVFLKQLPSGLLLVTGPFKVNGVPLRRVNQSYVIATSTKVD
Sbjct: 121 SITPGTVLIILTGRFKGKRVVFLKQLPSGLLLVTGPFKVNGVPLRRVNQSYVIATSTKVD 180

Query: 181 IAGVNVEKFDDKYFSKEVQKKKKKGEGEFFEAEKEEKSALPQDKKDDQKAVDSALLKSIE 240
           I GVNVEKFDDKYFSKEVQKKKKKGEGEFFEAEKEEKSALPQDKKDDQK VDSALLKSIE
Sbjct: 181 ITGVNVEKFDDKYFSKEVQKKKKKGEGEFFEAEKEEKSALPQDKKDDQKTVDSALLKSIE 231

Query: 241 AVSDLKTYLAARFSLKAGMKPHELVF 267
           AVSDLKTYLAARFSLKAGMKPHELVF
Sbjct: 241 AVSDLKTYLAARFSLKAGMKPHELVF 231

[Close]

BLAST of CmUC10G193930 vs. ExPASy TrEMBL
Match: A0A6J1J7G9 (60S ribosomal protein L6 OS=Cucurbita maxima OX=3661 GN=LOC111482059 PE=3 SV=1)

HSP 1 Score: 415.2 bits (1066), Expect = 2.0e-112
Identity = 224/266 (84.21%), Postives = 227/266 (85.34%), Query Frame = 0


Query: 1   MAPKTARVSRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKADTPAEKPP 60
           MAPKTARVSRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDA+PK D PAEKPP
Sbjct: 1   MAPKTARVSRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAQPKTDAPAEKPP 60

Query: 61  KFYPADDVKKPLVNKRKAKPTKLSVLELIMFAVLSTLVWLGNRGIGVNCRMDNVKPRYGS 120
           KFYPADDVKKPLVNKRKAKPTKL                                    S
Sbjct: 61  KFYPADDVKKPLVNKRKAKPTKLR-----------------------------------S 120

Query: 121 SITPGTVLIILTGRFKGKRVVFLKQLPSGLLLVTGPFKVNGVPLRRVNQSYVIATSTKVD 180
           SITPGTVLIILTGRFKGKRVVFLKQLPSGLLLVTGPFKVNGVPLRRVNQSYVIATSTKVD
Sbjct: 121 SITPGTVLIILTGRFKGKRVVFLKQLPSGLLLVTGPFKVNGVPLRRVNQSYVIATSTKVD 180

Query: 181 IAGVNVEKFDDKYFSKEVQKKKKKGEGEFFEAEKEEKSALPQDKKDDQKAVDSALLKSIE 240
           +AGVNVEKFDDKYFSKEVQKKKKKGEGEFFEAEKEEKSALPQDKKDDQKAVDSALLKSIE
Sbjct: 181 LAGVNVEKFDDKYFSKEVQKKKKKGEGEFFEAEKEEKSALPQDKKDDQKAVDSALLKSIE 231

Query: 241 AVSDLKTYLAARFSLKAGMKPHELVF 267
           AVS LKTYLAARFSLK+GMKPHELVF
Sbjct: 241 AVSYLKTYLAARFSLKSGMKPHELVF 231

[Close]

BLAST of CmUC10G193930 vs. TAIR 10
Match: AT1G18540.1 (Ribosomal protein L6 family protein )

HSP 1 Score: 355.9 bits (912), Expect = 2.8e-98
Identity = 187/265 (70.57%), Postives = 206/265 (77.74%), Query Frame = 0


Query: 2   APKTARVSRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKADTPAEKPPK 61
           A +T +V+RNPDLIRGVGKYSRS+MYHKRGLWAIKAKNGGVFPRHDA+PK D P EKP K
Sbjct: 4   AKRTPKVNRNPDLIRGVGKYSRSQMYHKRGLWAIKAKNGGVFPRHDAQPKVDAPVEKPAK 63

Query: 62  FYPADDVKKPLVNKRKAKPTKLSVLELIMFAVLSTLVWLGNRGIGVNCRMDNVKPRYGSS 121
           FYPA+DVKKPLVN+RK KPTKL                                    +S
Sbjct: 64  FYPAEDVKKPLVNRRKPKPTKLK-----------------------------------AS 123

Query: 122 ITPGTVLIILTGRFKGKRVVFLKQLPSGLLLVTGPFKVNGVPLRRVNQSYVIATSTKVDI 181
           ITPGTVLIIL GRFKGKRVVFLKQL SGLLLVTGPFK+NGVPLRRVNQ+YVI TSTK+DI
Sbjct: 124 ITPGTVLIILAGRFKGKRVVFLKQLSSGLLLVTGPFKINGVPLRRVNQAYVIGTSTKIDI 183

Query: 182 AGVNVEKFDDKYFSKEVQKKKKKGEGEFFEAEKEEKSALPQDKKDDQKAVDSALLKSIEA 241
           +GVN EKFDDKYF K  +KKKKK EGEFFEAEKEEK  +PQ+KK+DQK VD+AL+KSIEA
Sbjct: 184 SGVNTEKFDDKYFGKVAEKKKKKTEGEFFEAEKEEKKEIPQEKKEDQKTVDAALIKSIEA 233

Query: 242 VSDLKTYLAARFSLKAGMKPHELVF 267
           V +LK YL ARFSL  GMKPHELVF
Sbjct: 244 VPELKVYLGARFSLSQGMKPHELVF 233

[Close]

BLAST of CmUC10G193930 vs. TAIR 10
Match: AT1G74060.1 (Ribosomal protein L6 family protein )

HSP 1 Score: 355.1 bits (910), Expect = 4.8e-98
Identity = 188/263 (71.48%), Postives = 206/263 (78.33%), Query Frame = 0


Query: 4   KTARVSRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKADTPAEKPPKFY 63
           +TA+V+RNPDLIRGVGKYSRS+MYHKRGLWAIKAKNGGVFPRHDAK K D P EKPPKFY
Sbjct: 6   RTAKVNRNPDLIRGVGKYSRSQMYHKRGLWAIKAKNGGVFPRHDAKSKVDAPVEKPPKFY 65

Query: 64  PADDVKKPLVNKRKAKPTKLSVLELIMFAVLSTLVWLGNRGIGVNCRMDNVKPRYGSSIT 123
           PA+DVKKPL N+R AKP KL                                    +SIT
Sbjct: 66  PAEDVKKPLPNRRTAKPAKLR-----------------------------------ASIT 125

Query: 124 PGTVLIILTGRFKGKRVVFLKQLPSGLLLVTGPFKVNGVPLRRVNQSYVIATSTKVDIAG 183
           PGTVLIIL GRFKGKRVVFLKQL SGLLLVTGPFK+NGVPLRRVNQ+YVI TSTKVDI+G
Sbjct: 126 PGTVLIILAGRFKGKRVVFLKQLASGLLLVTGPFKINGVPLRRVNQAYVIGTSTKVDISG 185

Query: 184 VNVEKFDDKYFSKEVQKKKKKGEGEFFEAEKEEKSALPQDKKDDQKAVDSALLKSIEAVS 243
           V ++KFDDKYF K  +KKKKK EGEFFEAEKEEK  +PQ KKDDQKAVD+AL+K+IEAV 
Sbjct: 186 VTLDKFDDKYFGKVAEKKKKKTEGEFFEAEKEEKKEIPQGKKDDQKAVDAALIKAIEAVP 233

Query: 244 DLKTYLAARFSLKAGMKPHELVF 267
           +LKTYL ARFSLK GMKPHELVF
Sbjct: 246 ELKTYLGARFSLKQGMKPHELVF 233

[Close]

BLAST of CmUC10G193930 vs. TAIR 10
Match: AT1G74050.1 (Ribosomal protein L6 family protein )

HSP 1 Score: 354.4 bits (908), Expect = 8.1e-98
Identity = 188/263 (71.48%), Postives = 206/263 (78.33%), Query Frame = 0


Query: 4   KTARVSRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKADTPAEKPPKFY 63
           +T +V+RNPDLIRGVGKYSRS+MYHKRGLWAIKAKNGGVFPRHDAK K D P EKPPKFY
Sbjct: 6   RTPKVNRNPDLIRGVGKYSRSQMYHKRGLWAIKAKNGGVFPRHDAKSKVDAPVEKPPKFY 65

Query: 64  PADDVKKPLVNKRKAKPTKLSVLELIMFAVLSTLVWLGNRGIGVNCRMDNVKPRYGSSIT 123
           PA+DVKKPL N+R AKPTKL                                    +SIT
Sbjct: 66  PAEDVKKPLPNRRTAKPTKLR-----------------------------------ASIT 125

Query: 124 PGTVLIILTGRFKGKRVVFLKQLPSGLLLVTGPFKVNGVPLRRVNQSYVIATSTKVDIAG 183
           PGTVLIIL GRFKGKRVVFLKQL SGLLLVTGPFK+NGVPLRRVNQ+YVI TSTKVDI+G
Sbjct: 126 PGTVLIILAGRFKGKRVVFLKQLASGLLLVTGPFKINGVPLRRVNQAYVIGTSTKVDISG 185

Query: 184 VNVEKFDDKYFSKEVQKKKKKGEGEFFEAEKEEKSALPQDKKDDQKAVDSALLKSIEAVS 243
           V ++KFDDKYF K  +KKKKK EGEFFEAEKEEK  +PQ KKDDQKAVD+AL+K+IEAV 
Sbjct: 186 VTLDKFDDKYFGKVAEKKKKKTEGEFFEAEKEEKKEIPQVKKDDQKAVDAALIKAIEAVP 233

Query: 244 DLKTYLAARFSLKAGMKPHELVF 267
           +LKTYL ARFSLK GMKPHELVF
Sbjct: 246 ELKTYLGARFSLKQGMKPHELVF 233

The following BLAST results are available for this feature:

BLAST of CmUC10G193930 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022935449.1	3.8e-113	84.59	60S ribosomal protein L6-1-like [Cucurbita moschata] >KAG6581596.1 60S ribosomal...	[more]
XP_004149609.1	6.4e-113	84.59	60S ribosomal protein L6-2 [Cucumis sativus] >KGN58615.1 hypothetical protein Cs...	[more]
XP_038880885.1	8.4e-113	84.96	60S ribosomal protein L6-1-like [Benincasa hispida]	[more]
XP_008461779.1	2.4e-112	84.21	PREDICTED: 60S ribosomal protein L6-1-like [Cucumis melo] >KAA0048314.1 60S ribo...	[more]
XP_023528566.1	4.2e-112	83.83	60S ribosomal protein L6-1-like [Cucurbita pepo subsp. pepo]	[more]

BLAST of CmUC10G193930 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FZ76	3.9e-97	70.57	60S ribosomal protein L6-1 OS=Arabidopsis thaliana OX=3702 GN=RPL6A PE=2 SV=1	[more]
Q9C9C6	6.7e-97	71.48	60S ribosomal protein L6-2 OS=Arabidopsis thaliana OX=3702 GN=RPL6B PE=2 SV=1	[more]
Q9C9C5	1.1e-96	71.48	60S ribosomal protein L6-3 OS=Arabidopsis thaliana OX=3702 GN=RPL6C PE=2 SV=1	[more]
P34091	1.1e-94	71.81	60S ribosomal protein L6 OS=Mesembryanthemum crystallinum OX=3544 GN=RPL6 PE=2 S...	[more]
P47911	2.5e-43	43.21	60S ribosomal protein L6 OS=Mus musculus OX=10090 GN=Rpl6 PE=1 SV=3	[more]

BLAST of CmUC10G193930 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1F5G0	1.8e-113	84.59	60S ribosomal protein L6 OS=Cucurbita moschata OX=3662 GN=LOC111442321 PE=3 SV=1	[more]
A0A0A0L9J7	3.1e-113	84.59	60S ribosomal protein L6 OS=Cucumis sativus OX=3659 GN=Csa_3G698560 PE=3 SV=1	[more]
A0A5D3CKB9	1.2e-112	84.21	60S ribosomal protein L6 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffol...	[more]
A0A1S3CFY6	1.2e-112	84.21	60S ribosomal protein L6 OS=Cucumis melo OX=3656 GN=LOC103500301 PE=3 SV=1	[more]
A0A6J1J7G9	2.0e-112	84.21	60S ribosomal protein L6 OS=Cucurbita maxima OX=3661 GN=LOC111482059 PE=3 SV=1	[more]

BLAST of CmUC10G193930 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G18540.1	2.8e-98	70.57	Ribosomal protein L6 family protein	[more]
AT1G74060.1	4.8e-98	71.48	Ribosomal protein L6 family protein	[more]
AT1G74050.1	8.1e-98	71.48	Ribosomal protein L6 family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (USVL531) v1
Date Performed: 2022-01-31

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000915	60S ribosomal protein L6E	PFAM	PF01159	Ribosomal_L6e	coord: 159..266 e-value: 1.7E-39 score: 134.9
IPR000915	60S ribosomal protein L6E	PANTHER	PTHR10715	60S RIBOSOMAL PROTEIN L6	coord: 119..266
IPR000915	60S ribosomal protein L6E	PANTHER	PTHR10715	60S RIBOSOMAL PROTEIN L6	coord: 1..84
IPR000915	60S ribosomal protein L6E	PROSITE	PS01170	RIBOSOMAL_L6E	coord: 160..178
IPR005568	Ribosomal protein L6, N-terminal	PFAM	PF03868	Ribosomal_L6e_N	coord: 4..59 e-value: 1.1E-15 score: 57.7
IPR014722	Ribosomal protein L2, domain 2	GENE3D	2.30.30.30		coord: 120..204 e-value: 5.7E-17 score: 63.5
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 44..67
None	No IPR available	PANTHER	PTHR10715:SF9	60S RIBOSOMAL PROTEIN L6	coord: 119..266
None	No IPR available	PANTHER	PTHR10715:SF9	60S RIBOSOMAL PROTEIN L6	coord: 1..84
IPR041997	Ribosomal Protein L6, KOW domain	CDD	cd13156	KOW_RPL6	coord: 120..266 e-value: 4.37381E-76 score: 226.275
IPR008991	Translation protein SH3-like domain superfamily	SUPERFAMILY	50104	Translation proteins SH3-like domain	coord: 121..210

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmUC10G193930.1	CmUC10G193930.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0002181	cytoplasmic translation
biological_process	GO:0000027	ribosomal large subunit assembly
biological_process	GO:0006412	translation
cellular_component	GO:0022625	cytosolic large ribosomal subunit
cellular_component	GO:0005840	ribosome
molecular_function	GO:0003723	RNA binding
molecular_function	GO:0003735	structural constituent of ribosome