Lsi11G000470 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview


Name	Lsi11G000470
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
Description	NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 7
Location	chr11: 565165 .. 565455 (-)
RNA-Seq Expression	Lsi11G000470
Synteny	Lsi11G000470

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAAGTCCAGGGCTCCTCGAAGAAGATGATAGCGACGCAGGCTGAGATGGTCGAGGCTAGGGTTCCAATTCCTTACAGAGACCAGTGCGCTCACTTGTTGATCCCTCTTAATAAATGCCGCCAATCCGAGTTCTACCTCCCATGGAAATGCGAAGACGAGCGCCATTCCTACGAGAAGTGTGAATATGAGCTCGTTATGGAGAGGATGCTTCAGATGCAGAAGATCCGTGAGGAGGAGGCCAAGTTGAAGAAGGGTATTCCTCTCATTCCCAAAACTGCCAATCTATGA

mRNA sequence

ATGGAAGTCCAGGGCTCCTCGAAGAAGATGATAGCGACGCAGGCTGAGATGGTCGAGGCTAGGGTTCCAATTCCTTACAGAGACCAGTGCGCTCACTTGTTGATCCCTCTTAATAAATGCCGCCAATCCGAGTTCTACCTCCCATGGAAATGCGAAGACGAGCGCCATTCCTACGAGAAGTGTGAATATGAGCTCGTTATGGAGAGGATGCTTCAGATGCAGAAGATCCGTGAGGAGGAGGCCAAGTTGAAGAAGGGTATTCCTCTCATTCCCAAAACTGCCAATCTATGA

Coding sequence (CDS)

ATGGAAGTCCAGGGCTCCTCGAAGAAGATGATAGCGACGCAGGCTGAGATGGTCGAGGCTAGGGTTCCAATTCCTTACAGAGACCAGTGCGCTCACTTGTTGATCCCTCTTAATAAATGCCGCCAATCCGAGTTCTACCTCCCATGGAAATGCGAAGACGAGCGCCATTCCTACGAGAAGTGTGAATATGAGCTCGTTATGGAGAGGATGCTTCAGATGCAGAAGATCCGTGAGGAGGAGGCCAAGTTGAAGAAGGGTATTCCTCTCATTCCCAAAACTGCCAATCTATGA

Protein sequence

MEVQGSSKKMIATQAEMVEARVPIPYRDQCAHLLIPLNKCRQSEFYLPWKCEDERHSYEKCEYELVMERMLQMQKIREEEAKLKKGIPLIPKTANL

Homology

[Close]

BLAST of Lsi11G000470 vs. ExPASy Swiss-Prot
Match: Q9SKC9 (NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 7 OS=Arabidopsis thaliana OX=3702 GN=At2g02050 PE=1 SV=1)

HSP 1 Score: 147.9 bits (372), Expect = 5.9e-35
Identity = 75/102 (73.53%), Postives = 82/102 (80.39%), Query Frame = 0


Query: 1   MEVQGSSKKMIATQAEMVEARVPIPYRDQCAHLLIPLNKCRQSEFYLPWKCEDERHSYEK 60
           MEV GSSKKMIATQ EM  A++ +  RD CAHLLIPLNKCRQ+EFYLPWKCEDERH YEK
Sbjct: 1   MEVPGSSKKMIATQEEMSAAKIALGSRDMCAHLLIPLNKCRQAEFYLPWKCEDERHVYEK 60

Query: 61  CEYELVMERMLQMQKIREEEAKLKK-------GIPLIPKTAN 96
           CEYELVMERML M+KIREEEA  K+        +PLIPKTAN
Sbjct: 61  CEYELVMERMLAMKKIREEEALAKQNKLQGNAAVPLIPKTAN 102

[Close]

BLAST of Lsi11G000470 vs. ExPASy Swiss-Prot
Match: Q54V61 (NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 7 OS=Dictyostelium discoideum OX=44689 GN=ndufb7 PE=3 SV=1)

HSP 1 Score: 85.5 bits (210), Expect = 3.6e-16
Identity = 41/86 (47.67%), Postives = 60/86 (69.77%), Query Frame = 0


Query: 7  SKKMIATQAEMVEARVPIPYRDQCAHLLIPLNKCRQSEFYLPWKCEDERHSYEKCEYELV 66
          S+KMIATQ +  +  +P+ +RD CAHLLIPLN CR S +Y PWKC DE+H+YE C+Y+  
Sbjct: 15 SRKMIATQQQCEDKNLPLSFRDYCAHLLIPLNDCRVSTYYAPWKCMDEKHAYEGCQYDEY 74

Query: 67 MERMLQMQKIREEEAKLKKGIPLIPK 93
          + R  +++K  ++EA+  K   +I K
Sbjct: 75 LYR--KIKKSEQDEAERIKREVVIEK 98

[Close]

BLAST of Lsi11G000470 vs. ExPASy Swiss-Prot
Match: Q0MQE4 (NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 7 OS=Pan troglodytes OX=9598 GN=NDUFB7 PE=2 SV=3)

HSP 1 Score: 58.9 bits (141), Expect = 3.6e-08
Identity = 36/89 (40.45%), Postives = 56/89 (62.92%), Query Frame = 0


Query: 8   KKMIATQAEMVEARVPIPYRDQCAHLLIPLNKCRQSEFYLPWKCEDERHSYEKCEY-ELV 67
           ++M+ATQ EM++A++ +  RD CAH LI L KC++  F     C+ ERH ++ CE+ + V
Sbjct: 37  REMVATQQEMMDAQLRLQLRDYCAHYLIRLLKCKRDSFPNFXACKQERHDWDYCEHRDYV 96

Query: 68  M--------ERMLQMQKIREEE-AKLKKG 87
           M         R+LQ +K RE++ A+L KG
Sbjct: 97  MRMKEFERERRLLQRKKRREKKAAELAKG 125

[Close]

BLAST of Lsi11G000470 vs. ExPASy Swiss-Prot
Match: Q0MQE3 (NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 7 OS=Gorilla gorilla gorilla OX=9595 GN=NDUFB7 PE=2 SV=3)

HSP 1 Score: 58.5 bits (140), Expect = 4.7e-08
Identity = 36/89 (40.45%), Postives = 56/89 (62.92%), Query Frame = 0


Query: 8   KKMIATQAEMVEARVPIPYRDQCAHLLIPLNKCRQSEFYLPWKCEDERHSYEKCEY-ELV 67
           ++M+ATQ EM++A++ +  RD CAH LI L KC++  F     C+ ERH ++ CE+ + V
Sbjct: 37  REMVATQQEMMDAQLRLQLRDYCAHYLIRLLKCKRDSFPNFLACKQERHDWDYCEHRDYV 96

Query: 68  M--------ERMLQMQKIREEE-AKLKKG 87
           M         R+LQ +K RE++ A+L KG
Sbjct: 97  MRMKEFERERRLLQRKKRREKKAAELAKG 125

[Close]

BLAST of Lsi11G000470 vs. ExPASy Swiss-Prot
Match: Q0MQE2 (NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 7 OS=Pongo pygmaeus OX=9600 GN=NDUFB7 PE=2 SV=3)

HSP 1 Score: 58.5 bits (140), Expect = 4.7e-08
Identity = 36/89 (40.45%), Postives = 56/89 (62.92%), Query Frame = 0


Query: 8   KKMIATQAEMVEARVPIPYRDQCAHLLIPLNKCRQSEFYLPWKCEDERHSYEKCEY-ELV 67
           ++M+ATQ EM++A++ +  RD CAH LI L KC++  F     C+ ERH ++ CE+ + V
Sbjct: 37  REMVATQQEMMDAQLRLQLRDYCAHYLIRLLKCKRDSFPNFLACKQERHDWDYCEHRDYV 96

Query: 68  M--------ERMLQMQKIREEE-AKLKKG 87
           M         R+LQ +K RE++ A+L KG
Sbjct: 97  MRMKEFERERRLLQRKKRREKKAAELAKG 125

[Close]

BLAST of Lsi11G000470 vs. ExPASy TrEMBL
Match: A0A6J1E0D5 (NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 7 OS=Momordica charantia OX=3673 GN=LOC111025235 PE=3 SV=1)

HSP 1 Score: 194.5 bits (493), Expect = 2.0e-46
Identity = 95/96 (98.96%), Postives = 96/96 (100.00%), Query Frame = 0


Query: 1  MEVQGSSKKMIATQAEMVEARVPIPYRDQCAHLLIPLNKCRQSEFYLPWKCEDERHSYEK 60
          MEVQGSSKKMIATQAEMVEARVPIPYRDQCAHLLIPLNKCRQSEFYLPWKCEDERHSYEK
Sbjct: 1  MEVQGSSKKMIATQAEMVEARVPIPYRDQCAHLLIPLNKCRQSEFYLPWKCEDERHSYEK 60

Query: 61 CEYELVMERMLQMQKIREEEAKLKKGIPLIPKTANL 97
          CEYELVMERMLQMQKIREEEAKLKKGIPLIPKTAN+
Sbjct: 61 CEYELVMERMLQMQKIREEEAKLKKGIPLIPKTANV 96

[Close]

BLAST of Lsi11G000470 vs. ExPASy TrEMBL
Match: A0A6J1K1V5 (NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 7 OS=Cucurbita maxima OX=3661 GN=LOC111490278 PE=3 SV=1)

HSP 1 Score: 191.0 bits (484), Expect = 2.2e-45
Identity = 93/96 (96.88%), Postives = 95/96 (98.96%), Query Frame = 0


Query: 1  MEVQGSSKKMIATQAEMVEARVPIPYRDQCAHLLIPLNKCRQSEFYLPWKCEDERHSYEK 60
          MEVQGSSKKMIATQAEMVEARVPIPYRDQCAHLLIPLNKCRQSEFYLPWKCE+ERHSYEK
Sbjct: 1  MEVQGSSKKMIATQAEMVEARVPIPYRDQCAHLLIPLNKCRQSEFYLPWKCENERHSYEK 60

Query: 61 CEYELVMERMLQMQKIREEEAKLKKGIPLIPKTANL 97
          CEYELVMERMLQMQKIREEEAK KKGIPLIPKTAN+
Sbjct: 61 CEYELVMERMLQMQKIREEEAKFKKGIPLIPKTANV 96

[Close]

BLAST of Lsi11G000470 vs. ExPASy TrEMBL
Match: A0A6J1EVU8 (NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 7 OS=Cucurbita moschata OX=3662 GN=LOC111436457 PE=3 SV=1)

HSP 1 Score: 191.0 bits (484), Expect = 2.2e-45
Identity = 93/96 (96.88%), Postives = 95/96 (98.96%), Query Frame = 0


Query: 1  MEVQGSSKKMIATQAEMVEARVPIPYRDQCAHLLIPLNKCRQSEFYLPWKCEDERHSYEK 60
          MEVQGSSKKMIATQAEMVEARVPIPYRDQCAHLLIPLNKCRQSEFYLPWKCE+ERHSYEK
Sbjct: 1  MEVQGSSKKMIATQAEMVEARVPIPYRDQCAHLLIPLNKCRQSEFYLPWKCENERHSYEK 60

Query: 61 CEYELVMERMLQMQKIREEEAKLKKGIPLIPKTANL 97
          CEYELVMERMLQMQKIREEEAK KKGIPLIPKTAN+
Sbjct: 61 CEYELVMERMLQMQKIREEEAKFKKGIPLIPKTANV 96

[Close]

BLAST of Lsi11G000470 vs. ExPASy TrEMBL
Match: A0A0A0KMK8 (NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 7 OS=Cucumis sativus OX=3659 GN=Csa_5G277970 PE=3 SV=1)

HSP 1 Score: 189.9 bits (481), Expect = 5.0e-45
Identity = 93/96 (96.88%), Postives = 95/96 (98.96%), Query Frame = 0


Query: 1  MEVQGSSKKMIATQAEMVEARVPIPYRDQCAHLLIPLNKCRQSEFYLPWKCEDERHSYEK 60
          MEVQGSSKKMIATQAEMVEARVPIPYRDQCAHLLIPLNKCRQSEFYLPWKCEDERHSYEK
Sbjct: 1  MEVQGSSKKMIATQAEMVEARVPIPYRDQCAHLLIPLNKCRQSEFYLPWKCEDERHSYEK 60

Query: 61 CEYELVMERMLQMQKIREEEAKLKKGIPLIPKTANL 97
          CEYELVMERMLQMQKIREE+AKLKKGI LIPKTAN+
Sbjct: 61 CEYELVMERMLQMQKIREEQAKLKKGIHLIPKTANV 96

[Close]

BLAST of Lsi11G000470 vs. ExPASy TrEMBL
Match: A0A5A7VND2 (NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 7 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold38G001810 PE=3 SV=1)

HSP 1 Score: 184.1 bits (466), Expect = 2.7e-43
Identity = 90/96 (93.75%), Postives = 93/96 (96.88%), Query Frame = 0


Query: 1  MEVQGSSKKMIATQAEMVEARVPIPYRDQCAHLLIPLNKCRQSEFYLPWKCEDERHSYEK 60
          ME QGSSKKMIATQAEMVEARVPIPYRDQCAHLLIPLNKCRQSEFYLPWKCEDERHSYEK
Sbjct: 1  MEFQGSSKKMIATQAEMVEARVPIPYRDQCAHLLIPLNKCRQSEFYLPWKCEDERHSYEK 60

Query: 61 CEYELVMERMLQMQKIREEEAKLKKGIPLIPKTANL 97
          CEYELVMERMLQMQKIREE+AKLK+GI LIPK AN+
Sbjct: 61 CEYELVMERMLQMQKIREEQAKLKEGIHLIPKPANV 96

[Close]

BLAST of Lsi11G000470 vs. NCBI nr
Match: XP_022158769.1 (NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 7 [Momordica charantia])

HSP 1 Score: 194.5 bits (493), Expect = 4.2e-46
Identity = 95/96 (98.96%), Postives = 96/96 (100.00%), Query Frame = 0


Query: 1  MEVQGSSKKMIATQAEMVEARVPIPYRDQCAHLLIPLNKCRQSEFYLPWKCEDERHSYEK 60
          MEVQGSSKKMIATQAEMVEARVPIPYRDQCAHLLIPLNKCRQSEFYLPWKCEDERHSYEK
Sbjct: 1  MEVQGSSKKMIATQAEMVEARVPIPYRDQCAHLLIPLNKCRQSEFYLPWKCEDERHSYEK 60

Query: 61 CEYELVMERMLQMQKIREEEAKLKKGIPLIPKTANL 97
          CEYELVMERMLQMQKIREEEAKLKKGIPLIPKTAN+
Sbjct: 61 CEYELVMERMLQMQKIREEEAKLKKGIPLIPKTANV 96

[Close]

BLAST of Lsi11G000470 vs. NCBI nr
Match: XP_038892568.1 (NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 7 [Benincasa hispida])

HSP 1 Score: 193.0 bits (489), Expect = 1.2e-45
Identity = 93/96 (96.88%), Postives = 96/96 (100.00%), Query Frame = 0


Query: 1  MEVQGSSKKMIATQAEMVEARVPIPYRDQCAHLLIPLNKCRQSEFYLPWKCEDERHSYEK 60
          MEVQGSSKKMIATQAEMVEARVPIPYRDQCAHLLIPLNKCRQSEFYLPWKCEDERHSYEK
Sbjct: 1  MEVQGSSKKMIATQAEMVEARVPIPYRDQCAHLLIPLNKCRQSEFYLPWKCEDERHSYEK 60

Query: 61 CEYELVMERMLQMQKIREEEAKLKKGIPLIPKTANL 97
          CEYELVMERMLQMQKIRE+EAKLKKG+PLIPKTAN+
Sbjct: 61 CEYELVMERMLQMQKIREQEAKLKKGVPLIPKTANV 96

[Close]

BLAST of Lsi11G000470 vs. NCBI nr
Match: XP_022930015.1 (NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 7 [Cucurbita moschata] >XP_022994625.1 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 7 [Cucurbita maxima] >XP_023553585.1 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 7-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 191.0 bits (484), Expect = 4.6e-45
Identity = 93/96 (96.88%), Postives = 95/96 (98.96%), Query Frame = 0


Query: 1  MEVQGSSKKMIATQAEMVEARVPIPYRDQCAHLLIPLNKCRQSEFYLPWKCEDERHSYEK 60
          MEVQGSSKKMIATQAEMVEARVPIPYRDQCAHLLIPLNKCRQSEFYLPWKCE+ERHSYEK
Sbjct: 1  MEVQGSSKKMIATQAEMVEARVPIPYRDQCAHLLIPLNKCRQSEFYLPWKCENERHSYEK 60

Query: 61 CEYELVMERMLQMQKIREEEAKLKKGIPLIPKTANL 97
          CEYELVMERMLQMQKIREEEAK KKGIPLIPKTAN+
Sbjct: 61 CEYELVMERMLQMQKIREEEAKFKKGIPLIPKTANV 96

[Close]

BLAST of Lsi11G000470 vs. NCBI nr
Match: KAG7032461.1 (NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 7, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 190.7 bits (483), Expect = 6.0e-45
Identity = 93/95 (97.89%), Postives = 94/95 (98.95%), Query Frame = 0


Query: 1  MEVQGSSKKMIATQAEMVEARVPIPYRDQCAHLLIPLNKCRQSEFYLPWKCEDERHSYEK 60
          MEVQGSSKKMIATQAEMVEARVPIPYRDQCAHLLIPLNKCRQSEFYLPWKCE+ERHSYEK
Sbjct: 1  MEVQGSSKKMIATQAEMVEARVPIPYRDQCAHLLIPLNKCRQSEFYLPWKCENERHSYEK 60

Query: 61 CEYELVMERMLQMQKIREEEAKLKKGIPLIPKTAN 96
          CEYELVMERMLQMQKIREEEAK KKGIPLIPKTAN
Sbjct: 61 CEYELVMERMLQMQKIREEEAKFKKGIPLIPKTAN 95

[Close]

BLAST of Lsi11G000470 vs. NCBI nr
Match: XP_004140393.1 (NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 7 isoform X2 [Cucumis sativus] >XP_031741832.1 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 7 isoform X2 [Cucumis sativus])

HSP 1 Score: 189.9 bits (481), Expect = 1.0e-44
Identity = 93/96 (96.88%), Postives = 95/96 (98.96%), Query Frame = 0


Query: 1  MEVQGSSKKMIATQAEMVEARVPIPYRDQCAHLLIPLNKCRQSEFYLPWKCEDERHSYEK 60
          MEVQGSSKKMIATQAEMVEARVPIPYRDQCAHLLIPLNKCRQSEFYLPWKCEDERHSYEK
Sbjct: 1  MEVQGSSKKMIATQAEMVEARVPIPYRDQCAHLLIPLNKCRQSEFYLPWKCEDERHSYEK 60

Query: 61 CEYELVMERMLQMQKIREEEAKLKKGIPLIPKTANL 97
          CEYELVMERMLQMQKIREE+AKLKKGI LIPKTAN+
Sbjct: 61 CEYELVMERMLQMQKIREEQAKLKKGIHLIPKTANV 96

[Close]

BLAST of Lsi11G000470 vs. TAIR 10
Match: AT2G02050.1 (NADH-ubiquinone oxidoreductase B18 subunit, putative )

HSP 1 Score: 147.9 bits (372), Expect = 4.2e-36
Identity = 75/102 (73.53%), Postives = 82/102 (80.39%), Query Frame = 0


Query: 1   MEVQGSSKKMIATQAEMVEARVPIPYRDQCAHLLIPLNKCRQSEFYLPWKCEDERHSYEK 60
           MEV GSSKKMIATQ EM  A++ +  RD CAHLLIPLNKCRQ+EFYLPWKCEDERH YEK
Sbjct: 1   MEVPGSSKKMIATQEEMSAAKIALGSRDMCAHLLIPLNKCRQAEFYLPWKCEDERHVYEK 60

Query: 61  CEYELVMERMLQMQKIREEEAKLKK-------GIPLIPKTAN 96
           CEYELVMERML M+KIREEEA  K+        +PLIPKTAN
Sbjct: 61  CEYELVMERMLAMKKIREEEALAKQNKLQGNAAVPLIPKTAN 102

The following BLAST results are available for this feature:

BLAST of Lsi11G000470 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SKC9	5.9e-35	73.53	NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 7 OS=Arabidopsis thali...	[more]
Q54V61	3.6e-16	47.67	NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 7 OS=Dictyostelium dis...	[more]
Q0MQE4	3.6e-08	40.45	NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 7 OS=Pan troglodytes O...	[more]
Q0MQE3	4.7e-08	40.45	NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 7 OS=Gorilla gorilla g...	[more]
Q0MQE2	4.7e-08	40.45	NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 7 OS=Pongo pygmaeus OX...	[more]

BLAST of Lsi11G000470 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1E0D5	2.0e-46	98.96	NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 7 OS=Momordica charant...	[more]
A0A6J1K1V5	2.2e-45	96.88	NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 7 OS=Cucurbita maxima ...	[more]
A0A6J1EVU8	2.2e-45	96.88	NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 7 OS=Cucurbita moschat...	[more]
A0A0A0KMK8	5.0e-45	96.88	NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 7 OS=Cucumis sativus O...	[more]
A0A5A7VND2	2.7e-43	93.75	NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 7 OS=Cucumis melo var....	[more]

BLAST of Lsi11G000470 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022158769.1	4.2e-46	98.96	NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 7 [Momordica charantia...	[more]
XP_038892568.1	1.2e-45	96.88	NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 7 [Benincasa hispida]	[more]
XP_022930015.1	4.6e-45	96.88	NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 7 [Cucurbita moschata]...	[more]
KAG7032461.1	6.0e-45	97.89	NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 7, partial [Cucurbita ...	[more]
XP_004140393.1	1.0e-44	96.88	NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 7 isoform X2 [Cucumis ...	[more]

BLAST of Lsi11G000470 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G02050.1	4.2e-36	73.53	NADH-ubiquinone oxidoreductase B18 subunit, putative	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18

Position :

Zoom :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR008698	NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 7, NDUB7	PFAM	PF05676	NDUF_B7	coord: 11..73 e-value: 2.5E-30 score: 103.9
IPR008698	NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 7, NDUB7	PANTHER	PTHR20900	NADH:UBIQUINONE OXIDOREDUCTASE B18-LIKE SUBUNIT	coord: 1..95
None	No IPR available	PANTHER	PTHR20900:SF2	BNAC09G20920D PROTEIN	coord: 1..95
None	No IPR available	PROSITE	PS51808	CHCH	coord: 27..69 score: 13.600792

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi11G000470.1	Lsi11G000470.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005758	mitochondrial intermembrane space
cellular_component	GO:0005747	mitochondrial respiratory chain complex I
cellular_component	GO:0005739	mitochondrion