Sed0002749 (gene) Chayote v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below.ATGGAGTCTTCTGAAGTGTGTCTAAATGATATTATTTTGGGAAAAGTGAAAAAAGAATTTTGCAGTTTCATAGGAAGAATTGTGAGAATTCAAAATAAAAGTTCACTTTGGTTCAAAAAGTGTACATCTTGCAATAGAAGAGTATATCCAATAGGAAATGCTATCACAAGTTCATGTTCAATATGTAATAATGAATCTATTTCATTCGTACGAAGATTCATGTTAAAAGTGATAGTTTCAGATGGGGATTCAGAAGCCTACATTACCATGTTTGATGCTACTGAGCATTTAACAGGTTGTAATGTAGTTGAGTATTTCAATAATCTATCTCAGGTAAGTTTTACATTTTTATTAAGTTTCATAAACATTTAATTTCATAAATGTCGTCCATTCTTTATTTGAATACACAAATATTACATGATATGATTTTTTTTTTGTCTCAGGTTCAAAATAAGGAGAGTAGTGAATATTACCAAAACTTGGTTTTAGCCGAAGACAAGAAATACTACTTTTTAGTTAGATTGAATAAGGATGGAGAAAGAGATAGATAG ATGGAGTCTTCTGAAGTGTGTCTAAATGATATTATTTTGGGAAAAGTGAAAAAAGAATTTTGCAGTTTCATAGGAAGAATTGTGAGAATTCAAAATAAAAGTTCACTTTGGTTCAAAAAGTGTACATCTTGCAATAGAAGAGTATATCCAATAGGAAATGCTATCACAAGTTCATGTTCAATATGTAATAATGAATCTATTTCATTCGTACGAAGATTCATGTTAAAAGTGATAGTTTCAGATGGGGATTCAGAAGCCTACATTACCATGTTTGATGCTACTGAGCATTTAACAGGTTGTAATGTAGTTGAGTATTTCAATAATCTATCTCAGGTTCAAAATAAGGAGAGTAGTGAATATTACCAAAACTTGGTTTTAGCCGAAGACAAGAAATACTACTTTTTAGTTAGATTGAATAAGGATGGAGAAAGAGATAGATAG ATGGAGTCTTCTGAAGTGTGTCTAAATGATATTATTTTGGGAAAAGTGAAAAAAGAATTTTGCAGTTTCATAGGAAGAATTGTGAGAATTCAAAATAAAAGTTCACTTTGGTTCAAAAAGTGTACATCTTGCAATAGAAGAGTATATCCAATAGGAAATGCTATCACAAGTTCATGTTCAATATGTAATAATGAATCTATTTCATTCGTACGAAGATTCATGTTAAAAGTGATAGTTTCAGATGGGGATTCAGAAGCCTACATTACCATGTTTGATGCTACTGAGCATTTAACAGGTTGTAATGTAGTTGAGTATTTCAATAATCTATCTCAGGTTCAAAATAAGGAGAGTAGTGAATATTACCAAAACTTGGTTTTAGCCGAAGACAAGAAATACTACTTTTTAGTTAGATTGAATAAGGATGGAGAAAGAGATAGATAG MESSEVCLNDIILGKVKKEFCSFIGRIVRIQNKSSLWFKKCTSCNRRVYPIGNAITSSCSICNNESISFVRRFMLKVIVSDGDSEAYITMFDATEHLTGCNVVEYFNNLSQVQNKESSEYYQNLVLAEDKKYYFLVRLNKDGERDR Homology
BLAST of Sed0002749 vs. NCBI nr
Match: XP_020242959.1 (replication protein A 70 kDa DNA-binding subunit B-like [Asparagus officinalis]) HSP 1 Score: 93.2 bits (230), Expect = 2.0e-15 Identity = 48/130 (36.92%), Postives = 75/130 (57.69%), Query Frame = 0
BLAST of Sed0002749 vs. NCBI nr
Match: XP_016476407.1 (PREDICTED: replication protein A 70 kDa DNA-binding subunit B-like [Nicotiana tabacum]) HSP 1 Score: 91.7 bits (226), Expect = 5.8e-15 Identity = 46/127 (36.22%), Postives = 74/127 (58.27%), Query Frame = 0
BLAST of Sed0002749 vs. NCBI nr
Match: KAG5512925.1 (hypothetical protein RHGRI_038656 [Rhododendron griersonianum]) HSP 1 Score: 89.7 bits (221), Expect = 2.2e-14 Identity = 40/130 (30.77%), Postives = 76/130 (58.46%), Query Frame = 0
BLAST of Sed0002749 vs. NCBI nr
Match: XP_016500091.1 (PREDICTED: replication protein A 70 kDa DNA-binding subunit A-like [Nicotiana tabacum]) HSP 1 Score: 88.6 bits (218), Expect = 4.9e-14 Identity = 43/127 (33.86%), Postives = 73/127 (57.48%), Query Frame = 0
BLAST of Sed0002749 vs. NCBI nr
Match: OIT08014.1 (hypothetical protein A4A49_30234 [Nicotiana attenuata]) HSP 1 Score: 87.8 bits (216), Expect = 8.4e-14 Identity = 43/127 (33.86%), Postives = 75/127 (59.06%), Query Frame = 0
BLAST of Sed0002749 vs. ExPASy TrEMBL
Match: A0A1S4AI89 (replication protein A 70 kDa DNA-binding subunit B-like OS=Nicotiana tabacum OX=4097 GN=LOC107797997 PE=4 SV=1) HSP 1 Score: 91.7 bits (226), Expect = 2.8e-15 Identity = 46/127 (36.22%), Postives = 74/127 (58.27%), Query Frame = 0
BLAST of Sed0002749 vs. ExPASy TrEMBL
Match: A0A1S4CG46 (replication protein A 70 kDa DNA-binding subunit A-like OS=Nicotiana tabacum OX=4097 GN=LOC107818567 PE=4 SV=1) HSP 1 Score: 88.6 bits (218), Expect = 2.4e-14 Identity = 43/127 (33.86%), Postives = 73/127 (57.48%), Query Frame = 0
BLAST of Sed0002749 vs. ExPASy TrEMBL
Match: A0A1J6IT36 (Rep_fac-A_C domain-containing protein OS=Nicotiana attenuata OX=49451 GN=A4A49_30234 PE=4 SV=1) HSP 1 Score: 87.8 bits (216), Expect = 4.0e-14 Identity = 43/127 (33.86%), Postives = 75/127 (59.06%), Query Frame = 0
BLAST of Sed0002749 vs. ExPASy TrEMBL
Match: A0A1S4BAI4 (replication protein A 70 kDa DNA-binding subunit B-like OS=Nicotiana tabacum OX=4097 GN=LOC107806315 PE=4 SV=1) HSP 1 Score: 87.4 bits (215), Expect = 5.3e-14 Identity = 43/127 (33.86%), Postives = 72/127 (56.69%), Query Frame = 0
BLAST of Sed0002749 vs. ExPASy TrEMBL
Match: A0A6A4KQR7 (Rep_fac-A_C domain-containing protein (Fragment) OS=Rhododendron williamsianum OX=262921 GN=C3L33_22861 PE=4 SV=1) HSP 1 Score: 85.9 bits (211), Expect = 1.5e-13 Identity = 37/131 (28.24%), Postives = 76/131 (58.02%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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