Tan0013750.7 (mRNA) Snake gourd v1

Overview


Name	Tan0013750.7
Type	mRNA
Organism	Trichosanthes anguina (Snake gourd v1)
Description	E3 ubiquitin-protein ligase MARCH2-like isoform X1
Location	LG07: 3878773 .. 3882876 (+)
Sequence length	1576
RNA-Seq Expression	Tan0013750.7
Synteny	Tan0013750.7

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CCCTTTTGATTCTATTCGCTTTTGTTCTCGATTTTGCTACTGTTCTCTCTGTTAACCTCGTTTGTGATTTTGTTCTCGATTGCTGTGTGTAATGCAATTGTTTCGATGGGCTTTTGTGGCTCAGTCGTTTAATTTGTTTGGACTGATTGAAGTTTGGTTGGAGAAAATTATTTCGCTTCAATTTGTTTGGTGGGCTTGGATTTCTGAAATTGGGTTTTGTGAATTGAGGCTGGTTCGTGATTTTCGCTTTGTTTTGGAGTGAATTTTTAAGTTCAATTGTGACATGTAATGCAAATTTTGATTGTATTTGTGTCTCAGTTGTTTGTTTGGACTGGGAGAAATTTTGATAGGTGGAGATTTGGCTTCAATTGGTTGGTGGGTTTGTTTCTCTCTTTATTTCTTTTTCTTTACTGGTGTTGTGGGATGAAGACTGAGTTAAAGAAACTTTGTATTCAATTTAGGGTGAGAGAAATTGGAGAAAGGGATGATGCTCAGAAATGTCAGCTAAGGAATTTTGTTCAATTGATTCAAGTTTGTGGAGTTTGGAATTTGAATGACCTTTCAAAGATGACGGATTGCCATTCGAACGATCCAAAGGCCAACACCATTGCCAATCAGAACGATGAAACCGACCTTGAGAAGCAGAGGGTTGCTCAGCCATTAGCATCAGAGCCCTCTACCAGTGATGCTGATGATCATACACCATTGACAATTGTTGTTTCTAATGGGGAGCCCAAATCAATCTCTGAGGTTCCTGGGACTCCTCAAGAGGAATTATTGCCTTGTGCTGTTTCCCCCAAAAAGGAGCTCTTGTCTACAACTTCTAGTTCTGATGAGCAGTGCAGGTACATTTGAAATGCTGCTTTTCCCTGAAAAAGGCTTTTCTAGTTGTTCTGTTCATTTCTGTTGGTCCATTTTGGCATCACTTTTAGTTAGTTCCTCCTCCTTCCTCCTCTCTTCCTCATCTTGTTGTTATTTATGTTGTTTGTTTCATTGCTTGTCAGCCATAAAACATTAGATAGTCCCAACTTTGATTGCTGAAAATTGATGCTTTCTATGGTTTGTTAAATCACCAATGAATCCAAAAGATTAATCCGAGAGTCAAATATGTGATCTATTAATGTAAATTTTTTTTCTTTTGCTGGGGTTGATATCATGTTGAACTATGATTAAATCTAAAAGTTTTAGTTGATGGGATATATTTACTTTTTTTATACATAGTCTAAGACTAAAACCATCAACATGAGTATAACTCAACAGGTAAGGCATATACTCCTTAGAGGTTTAAGTCTCCACCCCTACATTTGTTGCACTAACGAAATCGTAATGCTATTACTTCTTCTTTTGGAAATCTTACCTAAGTTGTACATTATAAATAACAGTTTTTAAATACTGTTGTCTTTCCATGTAATTTGCATTATAATGGAGTATGTCCACAGTTACCATTGGCTTCATTTATCTGGTTAATGTGTTGTAAAGGAAGTTGAGGCCATTAAGCCTGAGTACTATTATTCAGAATTTGTCAGCAAGAAAAGGAAGAAGTCTTGATAGAACTTGGATGTCATTGTCGAGGTGGTCTCGCAAAAGCTCATCGGACTTGCATAGATACTTGGTTTCGTACTAAAGGATCAAACAGATGTGAGATATGCCAGTAAGTTAGTCTTTTTGAGGATGACATTCATTGACTCAACAGAATCATAGTGGAGGCATTTTGAAATGCTATTTTGCTAACTTTTGCAGGGTTGTAGCAGCGAATGTATCACCTCCACAATCACATCATGGTGTAGGTATTCTGTAGCTTTCGGTGGCAATGCTTTTGATTAGTACTTTTCAATTCCTAGCCTCTTCCATCTTTATTAACTCTAATTGTAAAACTTATAAAATCAAACGCCTCAATGAATATTGAATCAGTATTTTTGTCCTGACTACAGTGTTAGTGTTATTAGTTGATGATCAACATCAGTGTCTTAGTTTTGCATTTGCTACAGTCCCAATAACCATTTGGTTTTTTTTGAAAATTGTGCTTGTTTTCTCATCATTTCTCTACAATTTTCTACAATTGCTTTCATCTTTCTTAAAAAACTATTGAATTCTTAGCAAAATTTCAAAAACAAAAATAAGTTTTTGAAAAATACAGGTAAAAAGTGGATAACAAAACAAGGAAACCCCGAGGTGGAACTAGTATTTATAGGCTTAATTGTCAAAAACCAAATGGTTATTTAAACAGGGCCTACATTTTCTTGCACTTCCATTTCCCACATTAGGAAAATTCTATCATGGCATTTTCATCTCTAATCTTTGCTTATGAGTATTCCTTTAATTTTGACCAAGATGACTTGAACCTATTCTCTCTAAGAACTTTGTTGTTTAGAAGGTCCTTTTTGACCACTAGGCCAAGTCATGGTGGTTGATGTGTCAAACATATAAAATTGCATTAGTGGATTAGTGGTTTATTCAGATTTGAATTGATATAGAAAAAAAGTATTGTAGGCTGAAAACAACTGGTTTATCATTCACAATGCTTCCTCTCCTCTCTAAACTTAGAAATGTTAGCTTTTTAATGAAATACCTTGATAAGAAAGAGGGAGGAGACGTGTAAAGTGGCAAGGAACCATTCACCCTCAAAACTATGTACAAACAAACCTAACTTCTGAACAACTAATTACATGGCTTTTAAAATTTGTTAAGGTTTTGTTTTGATCATGTTAGGGTACTAATAGGGATTTAGGGATAGTAGTAGTATGATATGGGTAATTAGTTAGGGAGTTAGTTAATGTTTGAACATTCTTTTTCGGCTCGCTTCGTTGCTTCATTGGTATGTTCTCCTTCCTCTTGTGGTGTTGCTTTTCCGACTCTGTCCTCGCCGGTGATTTCTCCCTCCTCCCTTTCGGAACAAGATAAACCAAGTATAAGACACTTGGAACCTCCCTTTTGAGTATGCTAACCCAACCCCTAAAAACCACTCAACAATTGCTTACCTTTCCCTCAATCCCACTCCCTCTATTTATAACCAAAAACACTAACTAACTCCCTAACTAACTCCCACTCCCTCTTGAGTATGCATACTCAAGAGGAAGGAGAACATACCAATGAAGCAACGAAGCGAGCCGAAAAAGAATGTTCAAACACTAACTAACTCCTTAACTAATTACCCTAATGCCCCTACTAATACCATACTACTACTATCCCTAAATCTCTATTAGTACCCTAACAGATCGAAAGATACGTTTTCTTTTGCTTTGTATCGTTGCTACCTATAAATTCAAACTATTGATTCGTGAGAATCGCCGCTTAAAACTATATATTTAGCATTAAACTTATGACCTTGATGGAAGGATATGGTATTGGAACTAACCTGAATTTCGATAATTCCTTATATTTGACAAGCACAGACCAACTACTGGATTTGGAGGATTGATCCAACCTACAGAACTCAAGATACTGAAAGGGTAACAAGAATCTCACTTTTCCTGCTTGTTTCGTGAGTAGTCAAAAACATCAACCTTCTTCATAATTATTTATGCAGCAGCACTGTTTCAGTCCACTTTGGCTGGCTTTTGCCATCCTCATAGGAGGTCTCCTACTGGACATTCTTATATCCATCACCCTCGGCGTTTCGGCATTGCCCGTAAATATAATCATTGGTATGTTCATAACTTCTGTCGATCGAGCTATATCTAGTTTCGTGTTGTGCTTTTTTATGGTTATTGAAACCTTGAAGAACAGGAGTTATTGTTGTGCTTGGACTTGGAACTGTGTTTCGGCTTGCCCTGGAGTTCTTTCAGGAGTGGAATTCAACCAGAGGATCGCAAAGAGTGGAATCAAATGTCACTATTGGGTACTTTCCAGCTATATAGTAAGTCTTTGACTGTTTGTTAAAAAAACATGATAAATAAATGAAGTGAAAATATATTTTTTATTCTTGTCTTTTCCCAGATGTATTAACCTCTTGATCAAACATATTAGTAATGGATATTGTGTTCTAATTGTAAATTTGACAATAAATTAGTAAATAGTTTTAGAGAGATTGCAAGTGATCAATAATAGAATATTATGTTTTGACAACGTTTTCTTAATTGTAAATTTTATATTCGTCAAAGTCGG

mRNA sequence

CCCTTTTGATTCTATTCGCTTTTGTTCTCGATTTTGCTACTGTTCTCTCTGTTAACCTCGTTTGTGATTTTGTTCTCGATTGCTGTGTGTAATGCAATTGTTTCGATGGGCTTTTGTGGCTCAGTCGTTTAATTTGTTTGGACTGATTGAAGTTTGGTTGGAGAAAATTATTTCGCTTCAATTTGTTTGGTGGGCTTGGATTTCTGAAATTGGGTTTTGTGAATTGAGGCTGGTTCGTGATTTTCGCTTTGTTTTGGAGTGAATTTTTAAGTTCAATTGTGACATGTAATGCAAATTTTGATTGTATTTGTGTCTCAGTTGTTTGTTTGGACTGGGAGAAATTTTGATAGGTGGAGATTTGGCTTCAATTGGTTGGTGGGTTTGTTTCTCTCTTTATTTCTTTTTCTTTACTGGTGTTGTGGGATGAAGACTGAGTTAAAGAAACTTTGTATTCAATTTAGGGTGAGAGAAATTGGAGAAAGGGATGATGCTCAGAAATGTCAGCTAAGGAATTTTGTTCAATTGATTCAAGTTTGTGGAGTTTGGAATTTGAATGACCTTTCAAAGATGACGGATTGCCATTCGAACGATCCAAAGGCCAACACCATTGCCAATCAGAACGATGAAACCGACCTTGAGAAGCAGAGGGTTGCTCAGCCATTAGCATCAGAGCCCTCTACCAGTGATGCTGATGATCATACACCATTGACAATTGTTGTTTCTAATGGGGAGCCCAAATCAATCTCTGAGGTTCCTGGGACTCCTCAAGAGGAATTATTGCCTTGTGCTGTTTCCCCCAAAAAGGAGCTCTTGTCTACAACTTCTAGTTCTGATGAGCAGTGCAGAATTTGTCAGCAAGAAAAGGAAGAAGTCTTGATAGAACTTGGATGTCATTGTCGAGGTGGTCTCGCAAAAGCTCATCGGACTTGCATAGATACTTGGTTTCGTACTAAAGGATCAAACAGATGTGAGATATGCCAGGTTGTAGCAGCGAATGTATCACCTCCACAATCACATCATGGTACCAACTACTGGATTTGGAGGATTGATCCAACCTACAGAACTCAAGATACTGAAAGGCAGCACTGTTTCAGTCCACTTTGGCTGGCTTTTGCCATCCTCATAGGAGGTCTCCTACTGGACATTCTTATATCCATCACCCTCGGCGTTTCGGCATTGCCCGTAAATATAATCATTGGAGTTATTGTTGTGCTTGGACTTGGAACTGTGTTTCGGCTTGCCCTGGAGTTCTTTCAGGAGTGGAATTCAACCAGAGGATCGCAAAGAGTGGAATCAAATGTCACTATTGGGTACTTTCCAGCTATATAGTAAGTCTTTGACTGTTTGTTAAAAAAACATGATAAATAAATGAAGTGAAAATATATTTTTTATTCTTGTCTTTTCCCAGATGTATTAACCTCTTGATCAAACATATTAGTAATGGATATTGTGTTCTAATTGTAAATTTGACAATAAATTAGTAAATAGTTTTAGAGAGATTGCAAGTGATCAATAATAGAATATTATGTTTTGACAACGTTTTCTTAATTGTAAATTTTATATTCGTCAAAGTCGG

Coding sequence (CDS)

ATGCAAATTTTGATTGTATTTGTGTCTCAGTTGTTTGTTTGGACTGGGAGAAATTTTGATAGGTGGAGATTTGGCTTCAATTGGTTGGTGGGTTTGTTTCTCTCTTTATTTCTTTTTCTTTACTGGTGTTGTGGGATGAAGACTGAGTTAAAGAAACTTTGTATTCAATTTAGGGTGAGAGAAATTGGAGAAAGGGATGATGCTCAGAAATGTCAGCTAAGGAATTTTGTTCAATTGATTCAAGTTTGTGGAGTTTGGAATTTGAATGACCTTTCAAAGATGACGGATTGCCATTCGAACGATCCAAAGGCCAACACCATTGCCAATCAGAACGATGAAACCGACCTTGAGAAGCAGAGGGTTGCTCAGCCATTAGCATCAGAGCCCTCTACCAGTGATGCTGATGATCATACACCATTGACAATTGTTGTTTCTAATGGGGAGCCCAAATCAATCTCTGAGGTTCCTGGGACTCCTCAAGAGGAATTATTGCCTTGTGCTGTTTCCCCCAAAAAGGAGCTCTTGTCTACAACTTCTAGTTCTGATGAGCAGTGCAGAATTTGTCAGCAAGAAAAGGAAGAAGTCTTGATAGAACTTGGATGTCATTGTCGAGGTGGTCTCGCAAAAGCTCATCGGACTTGCATAGATACTTGGTTTCGTACTAAAGGATCAAACAGATGTGAGATATGCCAGGTTGTAGCAGCGAATGTATCACCTCCACAATCACATCATGGTACCAACTACTGGATTTGGAGGATTGATCCAACCTACAGAACTCAAGATACTGAAAGGCAGCACTGTTTCAGTCCACTTTGGCTGGCTTTTGCCATCCTCATAGGAGGTCTCCTACTGGACATTCTTATATCCATCACCCTCGGCGTTTCGGCATTGCCCGTAAATATAATCATTGGAGTTATTGTTGTGCTTGGACTTGGAACTGTGTTTCGGCTTGCCCTGGAGTTCTTTCAGGAGTGGAATTCAACCAGAGGATCGCAAAGAGTGGAATCAAATGTCACTATTGGGTACTTTCCAGCTATATAG

Protein sequence

MQILIVFVSQLFVWTGRNFDRWRFGFNWLVGLFLSLFLFLYWCCGMKTELKKLCIQFRVREIGERDDAQKCQLRNFVQLIQVCGVWNLNDLSKMTDCHSNDPKANTIANQNDETDLEKQRVAQPLASEPSTSDADDHTPLTIVVSNGEPKSISEVPGTPQEELLPCAVSPKKELLSTTSSSDEQCRICQQEKEEVLIELGCHCRGGLAKAHRTCIDTWFRTKGSNRCEICQVVAANVSPPQSHHGTNYWIWRIDPTYRTQDTERQHCFSPLWLAFAILIGGLLLDILISITLGVSALPVNIIIGVIVVLGLGTVFRLALEFFQEWNSTRGSQRVESNVTIGYFPAI

Homology

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BLAST of Tan0013750.7 vs. NCBI nr
Match: XP_038875308.1 (E3 ubiquitin-protein ligase MARCHF2 isoform X3 [Benincasa hispida])

HSP 1 Score: 446.8 bits (1148), Expect = 1.7e-121
Identity = 230/259 (88.80%), Postives = 237/259 (91.51%), Query Frame = 0


Query: 94  MTDCHSNDPKANTIANQNDETDLEKQRVAQPLAS--EPSTSDADDHTPLTIVVSNGEPKS 153
           M+DCHSND KANT ANQN++ DLEKQRVAQP +S  E ST D DD+T LTIVVS GE K 
Sbjct: 1   MSDCHSNDVKANTGANQNNDGDLEKQRVAQPSSSALELSTRDGDDNTLLTIVVSTGESKP 60

Query: 154 ISEVPGT----PQEELLPCAVSPKKELLSTTSSSDEQCRICQQEKEEVLIELGCHCRGGL 213
           ISEVPG      QE LLPC VSPKKELLSTTSSSDEQCRICQQEKEEVLIELGC+CRGGL
Sbjct: 61  ISEVPGVGTLCSQEGLLPCEVSPKKELLSTTSSSDEQCRICQQEKEEVLIELGCNCRGGL 120

Query: 214 AKAHRTCIDTWFRTKGSNRCEICQVVAANVSPPQSHHGTNYWIWRIDPTYRTQDTERQHC 273
           AKAHRTCIDTWFRTKGSNRCEICQVVAANVSPPQSHHGTNYWIWRIDPTYRTQD +RQHC
Sbjct: 121 AKAHRTCIDTWFRTKGSNRCEICQVVAANVSPPQSHHGTNYWIWRIDPTYRTQDPQRQHC 180

Query: 274 FSPLWLAFAILIGGLLLDILISITLGVSALPVNIIIGVIVVLGLGTVFRLALEFFQEWNS 333
           FSPLWLAFAILIGGLLLDILISITLGVSALPVNIIIGVIVVLGLGTVFRLALEFFQEWNS
Sbjct: 181 FSPLWLAFAILIGGLLLDILISITLGVSALPVNIIIGVIVVLGLGTVFRLALEFFQEWNS 240

Query: 334 TRGSQRVESNVTIGYFPAI 347
           TRGSQRVESNVTIGYFPAI
Sbjct: 241 TRGSQRVESNVTIGYFPAI 259

[Close]

BLAST of Tan0013750.7 vs. NCBI nr
Match: XP_022995601.1 (E3 ubiquitin-protein ligase MARCH2-like isoform X1 [Cucurbita maxima])

HSP 1 Score: 442.2 bits (1136), Expect = 4.1e-120
Identity = 221/253 (87.35%), Postives = 233/253 (92.09%), Query Frame = 0


Query: 94  MTDCHSNDPKANTIANQNDETDLEKQRVAQPLASEPSTSDADDHTPLTIVVSNGEPKSIS 153
           M+DCH ND K NT A +N+E DLEKQRV  P A++PSTSD DDHTPLTIVVSNGE KS+S
Sbjct: 1   MSDCHLNDVKGNTSAEKNNEADLEKQRVELPSAADPSTSDVDDHTPLTIVVSNGELKSVS 60

Query: 154 EVPGTPQEELLPCAVSPKKELLSTTSSSDEQCRICQQEKEEVLIELGCHCRGGLAKAHRT 213
           EV   P+E+LLPCAVSP KELLSTTSSSDEQCRICQQEKEEVLIELGCHCRGGLAKAHRT
Sbjct: 61  EV---PREKLLPCAVSPMKELLSTTSSSDEQCRICQQEKEEVLIELGCHCRGGLAKAHRT 120

Query: 214 CIDTWFRTKGSNRCEICQVVAANVSPPQSHHGTNYWIWRIDPTYRTQDTERQHCFSPLWL 273
           CIDTWFR+KGSNRCEICQVVAANVSPPQSHH TNYWIWRIDPTYRTQ+ ERQ  FSPLWL
Sbjct: 121 CIDTWFRSKGSNRCEICQVVAANVSPPQSHHATNYWIWRIDPTYRTQEPERQRYFSPLWL 180

Query: 274 AFAILIGGLLLDILISITLGVSALPVNIIIGVIVVLGLGTVFRLALEFFQEWNSTRGSQR 333
           AFAILIGGLLLDIL+SITLG+SALPVNIIIGVIVVLGLGTV RLALEFFQEWNSTRGSQR
Sbjct: 181 AFAILIGGLLLDILVSITLGISALPVNIIIGVIVVLGLGTVLRLALEFFQEWNSTRGSQR 240

Query: 334 VESNVTIGYFPAI 347
           VESNVTIGYFPAI
Sbjct: 241 VESNVTIGYFPAI 250

[Close]

BLAST of Tan0013750.7 vs. NCBI nr
Match: XP_023534486.1 (E3 ubiquitin-protein ligase MARCH2-like isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 441.4 bits (1134), Expect = 7.1e-120
Identity = 220/253 (86.96%), Postives = 234/253 (92.49%), Query Frame = 0


Query: 94  MTDCHSNDPKANTIANQNDETDLEKQRVAQPLASEPSTSDADDHTPLTIVVSNGEPKSIS 153
           M+DCH ND K NT A++N+E DLEKQRV  P A++PSTSD DDHTPLTIVVSNGE KSIS
Sbjct: 1   MSDCHLNDVKGNTSADKNNEADLEKQRVELPSAADPSTSDVDDHTPLTIVVSNGELKSIS 60

Query: 154 EVPGTPQEELLPCAVSPKKELLSTTSSSDEQCRICQQEKEEVLIELGCHCRGGLAKAHRT 213
           EV   P+EELLPCAVSP KELLSTTSSSDEQCRICQQEKEEVLIELGCHCRGGLAKAHRT
Sbjct: 61  EV---PREELLPCAVSPMKELLSTTSSSDEQCRICQQEKEEVLIELGCHCRGGLAKAHRT 120

Query: 214 CIDTWFRTKGSNRCEICQVVAANVSPPQSHHGTNYWIWRIDPTYRTQDTERQHCFSPLWL 273
           CIDTWFR+KGSNRCEICQVVAANVSPPQSHH TNYWIWRIDPTYRTQ+ ERQ  FSP+WL
Sbjct: 121 CIDTWFRSKGSNRCEICQVVAANVSPPQSHHATNYWIWRIDPTYRTQEPERQRYFSPIWL 180

Query: 274 AFAILIGGLLLDILISITLGVSALPVNIIIGVIVVLGLGTVFRLALEFFQEWNSTRGSQR 333
           AFAILIGGLLLDIL+SITLG+SALPVN+IIGVIVVLGLGTV RLALEFFQEWNSTRGS+R
Sbjct: 181 AFAILIGGLLLDILVSITLGISALPVNLIIGVIVVLGLGTVLRLALEFFQEWNSTRGSRR 240

Query: 334 VESNVTIGYFPAI 347
           VESNVTIGYFPAI
Sbjct: 241 VESNVTIGYFPAI 250

[Close]

BLAST of Tan0013750.7 vs. NCBI nr
Match: XP_038875309.1 (E3 ubiquitin-protein ligase MARCHF2 isoform X4 [Benincasa hispida])

HSP 1 Score: 439.9 bits (1130), Expect = 2.1e-119
Identity = 229/259 (88.42%), Postives = 236/259 (91.12%), Query Frame = 0


Query: 94  MTDCHSNDPKANTIANQNDETDLEKQRVAQPLAS--EPSTSDADDHTPLTIVVSNGEPKS 153
           M+DCHSND KANT ANQN++ DLEKQRVAQP +S  E ST D DD+T LTIVVS GE K 
Sbjct: 1   MSDCHSNDVKANTGANQNNDGDLEKQRVAQPSSSALELSTRDGDDNTLLTIVVSTGESKP 60

Query: 154 ISEVPGT----PQEELLPCAVSPKKELLSTTSSSDEQCRICQQEKEEVLIELGCHCRGGL 213
           ISEVPG      QE LLPC VSPKKELLSTTSSSDEQCRICQQEKEEVLIELGC+CRGGL
Sbjct: 61  ISEVPGVGTLCSQEGLLPCEVSPKKELLSTTSSSDEQCRICQQEKEEVLIELGCNCRGGL 120

Query: 214 AKAHRTCIDTWFRTKGSNRCEICQVVAANVSPPQSHHGTNYWIWRIDPTYRTQDTERQHC 273
           AKAHRTCIDTWFRTKGSNRCEICQVVAANVSPPQSHHGTNYWIWRIDPTYRTQD +R HC
Sbjct: 121 AKAHRTCIDTWFRTKGSNRCEICQVVAANVSPPQSHHGTNYWIWRIDPTYRTQDPQR-HC 180

Query: 274 FSPLWLAFAILIGGLLLDILISITLGVSALPVNIIIGVIVVLGLGTVFRLALEFFQEWNS 333
           FSPLWLAFAILIGGLLLDILISITLGVSALPVNIIIGVIVVLGLGTVFRLALEFFQEWNS
Sbjct: 181 FSPLWLAFAILIGGLLLDILISITLGVSALPVNIIIGVIVVLGLGTVFRLALEFFQEWNS 240

Query: 334 TRGSQRVESNVTIGYFPAI 347
           TRGSQRVESNVTIGYFPAI
Sbjct: 241 TRGSQRVESNVTIGYFPAI 258

[Close]

BLAST of Tan0013750.7 vs. NCBI nr
Match: XP_022995603.1 (E3 ubiquitin-protein ligase MARCH2-like isoform X2 [Cucurbita maxima])

HSP 1 Score: 437.6 bits (1124), Expect = 1.0e-118
Identity = 220/253 (86.96%), Postives = 234/253 (92.49%), Query Frame = 0


Query: 94  MTDCHSNDPKANTIANQNDETDLEKQRVAQPLASEPSTSDADDHTPLTIVVSNGEPKSIS 153
           M+DCH ND K NT A +N+E DLEKQRV  P A++PSTSD DDHTPLTIVVSNGE KS+S
Sbjct: 1   MSDCHLNDVKGNTSAEKNNEADLEKQRVELPSAADPSTSDVDDHTPLTIVVSNGELKSVS 60

Query: 154 EVPGTPQEELLPCAVSPKKELLSTTSSSDEQCRICQQEKEEVLIELGCHCRGGLAKAHRT 213
           EV   P+E+LLPCAVSP KELLSTTSSSDEQCRICQQEKEEVLIELGCHCRGGLAKAHRT
Sbjct: 61  EV---PREKLLPCAVSPMKELLSTTSSSDEQCRICQQEKEEVLIELGCHCRGGLAKAHRT 120

Query: 214 CIDTWFRTKGSNRCEICQVVAANVSPPQSHHGTNYWIWRIDPTYRTQDTERQHCFSPLWL 273
           CIDTWFR+KGSNRCEICQVVAANVSPPQSHH TNYWIWRIDPTYRTQ+ ER++ FSPLWL
Sbjct: 121 CIDTWFRSKGSNRCEICQVVAANVSPPQSHHATNYWIWRIDPTYRTQEPERRY-FSPLWL 180

Query: 274 AFAILIGGLLLDILISITLGVSALPVNIIIGVIVVLGLGTVFRLALEFFQEWNSTRGSQR 333
           AFAILIGGLLLDIL+SITLG+SALPVNIIIGVIVVLGLGTV RLALEFFQEWNSTRGSQR
Sbjct: 181 AFAILIGGLLLDILVSITLGISALPVNIIIGVIVVLGLGTVLRLALEFFQEWNSTRGSQR 240

Query: 334 VESNVTIGYFPAI 347
           VESNVTIGYFPAI
Sbjct: 241 VESNVTIGYFPAI 249

[Close]

BLAST of Tan0013750.7 vs. ExPASy TrEMBL
Match: A0A6J1K2D4 (E3 ubiquitin-protein ligase MARCH2-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111491089 PE=4 SV=1)

HSP 1 Score: 442.2 bits (1136), Expect = 2.0e-120
Identity = 221/253 (87.35%), Postives = 233/253 (92.09%), Query Frame = 0


Query: 94  MTDCHSNDPKANTIANQNDETDLEKQRVAQPLASEPSTSDADDHTPLTIVVSNGEPKSIS 153
           M+DCH ND K NT A +N+E DLEKQRV  P A++PSTSD DDHTPLTIVVSNGE KS+S
Sbjct: 1   MSDCHLNDVKGNTSAEKNNEADLEKQRVELPSAADPSTSDVDDHTPLTIVVSNGELKSVS 60

Query: 154 EVPGTPQEELLPCAVSPKKELLSTTSSSDEQCRICQQEKEEVLIELGCHCRGGLAKAHRT 213
           EV   P+E+LLPCAVSP KELLSTTSSSDEQCRICQQEKEEVLIELGCHCRGGLAKAHRT
Sbjct: 61  EV---PREKLLPCAVSPMKELLSTTSSSDEQCRICQQEKEEVLIELGCHCRGGLAKAHRT 120

Query: 214 CIDTWFRTKGSNRCEICQVVAANVSPPQSHHGTNYWIWRIDPTYRTQDTERQHCFSPLWL 273
           CIDTWFR+KGSNRCEICQVVAANVSPPQSHH TNYWIWRIDPTYRTQ+ ERQ  FSPLWL
Sbjct: 121 CIDTWFRSKGSNRCEICQVVAANVSPPQSHHATNYWIWRIDPTYRTQEPERQRYFSPLWL 180

Query: 274 AFAILIGGLLLDILISITLGVSALPVNIIIGVIVVLGLGTVFRLALEFFQEWNSTRGSQR 333
           AFAILIGGLLLDIL+SITLG+SALPVNIIIGVIVVLGLGTV RLALEFFQEWNSTRGSQR
Sbjct: 181 AFAILIGGLLLDILVSITLGISALPVNIIIGVIVVLGLGTVLRLALEFFQEWNSTRGSQR 240

Query: 334 VESNVTIGYFPAI 347
           VESNVTIGYFPAI
Sbjct: 241 VESNVTIGYFPAI 250

[Close]

BLAST of Tan0013750.7 vs. ExPASy TrEMBL
Match: A0A6J1K8G6 (E3 ubiquitin-protein ligase MARCH2-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111491089 PE=4 SV=1)

HSP 1 Score: 437.6 bits (1124), Expect = 4.9e-119
Identity = 220/253 (86.96%), Postives = 234/253 (92.49%), Query Frame = 0


Query: 94  MTDCHSNDPKANTIANQNDETDLEKQRVAQPLASEPSTSDADDHTPLTIVVSNGEPKSIS 153
           M+DCH ND K NT A +N+E DLEKQRV  P A++PSTSD DDHTPLTIVVSNGE KS+S
Sbjct: 1   MSDCHLNDVKGNTSAEKNNEADLEKQRVELPSAADPSTSDVDDHTPLTIVVSNGELKSVS 60

Query: 154 EVPGTPQEELLPCAVSPKKELLSTTSSSDEQCRICQQEKEEVLIELGCHCRGGLAKAHRT 213
           EV   P+E+LLPCAVSP KELLSTTSSSDEQCRICQQEKEEVLIELGCHCRGGLAKAHRT
Sbjct: 61  EV---PREKLLPCAVSPMKELLSTTSSSDEQCRICQQEKEEVLIELGCHCRGGLAKAHRT 120

Query: 214 CIDTWFRTKGSNRCEICQVVAANVSPPQSHHGTNYWIWRIDPTYRTQDTERQHCFSPLWL 273
           CIDTWFR+KGSNRCEICQVVAANVSPPQSHH TNYWIWRIDPTYRTQ+ ER++ FSPLWL
Sbjct: 121 CIDTWFRSKGSNRCEICQVVAANVSPPQSHHATNYWIWRIDPTYRTQEPERRY-FSPLWL 180

Query: 274 AFAILIGGLLLDILISITLGVSALPVNIIIGVIVVLGLGTVFRLALEFFQEWNSTRGSQR 333
           AFAILIGGLLLDIL+SITLG+SALPVNIIIGVIVVLGLGTV RLALEFFQEWNSTRGSQR
Sbjct: 181 AFAILIGGLLLDILVSITLGISALPVNIIIGVIVVLGLGTVLRLALEFFQEWNSTRGSQR 240

Query: 334 VESNVTIGYFPAI 347
           VESNVTIGYFPAI
Sbjct: 241 VESNVTIGYFPAI 249

[Close]

BLAST of Tan0013750.7 vs. ExPASy TrEMBL
Match: A0A6J1H2W4 (E3 ubiquitin-protein ligase MARCH2-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111459604 PE=4 SV=1)

HSP 1 Score: 436.8 bits (1122), Expect = 8.4e-119
Identity = 219/253 (86.56%), Postives = 231/253 (91.30%), Query Frame = 0


Query: 94  MTDCHSNDPKANTIANQNDETDLEKQRVAQPLASEPSTSDADDHTPLTIVVSNGEPKSIS 153
           M DCH ND K NT A++N+  DLEKQRV  P A++PSTSD DDHTPLTIVVSNGE KSIS
Sbjct: 1   MLDCHLNDLKGNTSADKNNGADLEKQRVELPSAADPSTSDVDDHTPLTIVVSNGELKSIS 60

Query: 154 EVPGTPQEELLPCAVSPKKELLSTTSSSDEQCRICQQEKEEVLIELGCHCRGGLAKAHRT 213
           EV   P+EELLPCAVSP KELLSTTSSSDEQCRICQQEKEEVLIELGCHCRGGLAKAHRT
Sbjct: 61  EV---PREELLPCAVSPMKELLSTTSSSDEQCRICQQEKEEVLIELGCHCRGGLAKAHRT 120

Query: 214 CIDTWFRTKGSNRCEICQVVAANVSPPQSHHGTNYWIWRIDPTYRTQDTERQHCFSPLWL 273
           CIDTWFR+KGSNRCEICQVVAANVSPPQSHH TNYWIWRIDPTYRTQ+ ERQ  FSP+WL
Sbjct: 121 CIDTWFRSKGSNRCEICQVVAANVSPPQSHHATNYWIWRIDPTYRTQEPERQSYFSPIWL 180

Query: 274 AFAILIGGLLLDILISITLGVSALPVNIIIGVIVVLGLGTVFRLALEFFQEWNSTRGSQR 333
           AFAILIGGLLLDIL+SITLG+SALPVN+IIGVIVVLGLGTV RLALEFF EWNSTRGSQR
Sbjct: 181 AFAILIGGLLLDILVSITLGISALPVNLIIGVIVVLGLGTVLRLALEFFHEWNSTRGSQR 240

Query: 334 VESNVTIGYFPAI 347
           VESNVTIGYFPAI
Sbjct: 241 VESNVTIGYFPAI 250

[Close]

BLAST of Tan0013750.7 vs. ExPASy TrEMBL
Match: A0A6J1E3C4 (E3 ubiquitin-protein ligase MARCH2 isoform X2 OS=Momordica charantia OX=3673 GN=LOC111026101 PE=4 SV=1)

HSP 1 Score: 434.1 bits (1115), Expect = 5.5e-118
Identity = 219/258 (84.88%), Postives = 230/258 (89.15%), Query Frame = 0


Query: 94  MTDCHSNDPKANTIANQNDETDLEKQRVAQPLASEPSTSDADDHTPLTIVVSNGEPKSIS 153
           M++C SND K +TIAN +DE+DLEKQR AQP ASEPS SDADDHT LTIVVS GEPK +S
Sbjct: 1   MSECPSNDVKTSTIANSSDESDLEKQRGAQPSASEPSASDADDHTRLTIVVSTGEPKPVS 60

Query: 154 EVPGT-----PQEELLPCAVSPKKELLSTTSSSDEQCRICQQEKEEVLIELGCHCRGGLA 213
           EVP T       EE  P  VSPKKELLS  SSSDEQCRICQQEKEE LIELGC CRGGLA
Sbjct: 61  EVPTTTATRLSHEEESPGIVSPKKELLSMASSSDEQCRICQQEKEEALIELGCQCRGGLA 120

Query: 214 KAHRTCIDTWFRTKGSNRCEICQVVAANVSPPQSHHGTNYWIWRIDPTYRTQDTERQHCF 273
           KAHRTCIDTWFRTKGSNRCEICQV+AANVSPPQSHHGTNYWIWRIDPTYRTQD ERQHCF
Sbjct: 121 KAHRTCIDTWFRTKGSNRCEICQVIAANVSPPQSHHGTNYWIWRIDPTYRTQDPERQHCF 180

Query: 274 SPLWLAFAILIGGLLLDILISITLGVSALPVNIIIGVIVVLGLGTVFRLALEFFQEWNST 333
           SPLWLAFAILIGGLLLD+LISITLGVSALPVNIIIGVIVVLGLGTVFRLALEFFQEW+ST
Sbjct: 181 SPLWLAFAILIGGLLLDVLISITLGVSALPVNIIIGVIVVLGLGTVFRLALEFFQEWSST 240

Query: 334 RGSQRVESNVTIGYFPAI 347
           RG QRVESN+TIGY+PAI
Sbjct: 241 RGLQRVESNITIGYYPAI 258

[Close]

BLAST of Tan0013750.7 vs. ExPASy TrEMBL
Match: A0A6J1H4V9 (E3 ubiquitin-protein ligase MARCH2-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111459604 PE=4 SV=1)

HSP 1 Score: 432.2 bits (1110), Expect = 2.1e-117
Identity = 218/253 (86.17%), Postives = 231/253 (91.30%), Query Frame = 0


Query: 94  MTDCHSNDPKANTIANQNDETDLEKQRVAQPLASEPSTSDADDHTPLTIVVSNGEPKSIS 153
           M DCH ND K NT A++N+  DLEKQRV  P A++PSTSD DDHTPLTIVVSNGE KSIS
Sbjct: 1   MLDCHLNDLKGNTSADKNNGADLEKQRVELPSAADPSTSDVDDHTPLTIVVSNGELKSIS 60

Query: 154 EVPGTPQEELLPCAVSPKKELLSTTSSSDEQCRICQQEKEEVLIELGCHCRGGLAKAHRT 213
           EV   P+EELLPCAVSP KELLSTTSSSDEQCRICQQEKEEVLIELGCHCRGGLAKAHRT
Sbjct: 61  EV---PREELLPCAVSPMKELLSTTSSSDEQCRICQQEKEEVLIELGCHCRGGLAKAHRT 120

Query: 214 CIDTWFRTKGSNRCEICQVVAANVSPPQSHHGTNYWIWRIDPTYRTQDTERQHCFSPLWL 273
           CIDTWFR+KGSNRCEICQVVAANVSPPQSHH TNYWIWRIDPTYRTQ+ ER + FSP+WL
Sbjct: 121 CIDTWFRSKGSNRCEICQVVAANVSPPQSHHATNYWIWRIDPTYRTQEPERSY-FSPIWL 180

Query: 274 AFAILIGGLLLDILISITLGVSALPVNIIIGVIVVLGLGTVFRLALEFFQEWNSTRGSQR 333
           AFAILIGGLLLDIL+SITLG+SALPVN+IIGVIVVLGLGTV RLALEFF EWNSTRGSQR
Sbjct: 181 AFAILIGGLLLDILVSITLGISALPVNLIIGVIVVLGLGTVLRLALEFFHEWNSTRGSQR 240

Query: 334 VESNVTIGYFPAI 347
           VESNVTIGYFPAI
Sbjct: 241 VESNVTIGYFPAI 249

[Close]

BLAST of Tan0013750.7 vs. TAIR 10
Match: AT2G45530.1 (RING/U-box superfamily protein )

HSP 1 Score: 263.1 bits (671), Expect = 3.2e-70
Identity = 146/241 (60.58%), Postives = 175/241 (72.61%), Query Frame = 0


Query: 115 DLEKQRVAQPLASEP--STSDADDHTPLTIVVSNGEPKSISEVPGTPQEELLPCAVSPKK 174
           DLEKQ+  Q     P   +  A++   LTIVV NG+         + +EEL+   + P+K
Sbjct: 11  DLEKQQQQQQKDKSPQKQSESANESNHLTIVVCNGD---------SSREELVG-QIPPEK 70

Query: 175 EL-LSTTSSSDEQCRICQQEKEEVLIELGCHCRGGLAKAHRTCIDTWFRTKGSNRCEICQ 234
           E+ LS   SS EQCR+C Q+KEEVLIELGC CRGGLAKAHR+CID WFRTKGSN+CEICQ
Sbjct: 71  EVSLSRNGSSHEQCRVCLQDKEEVLIELGCQCRGGLAKAHRSCIDAWFRTKGSNQCEICQ 130

Query: 235 VVAANVSPPQSHHGTNYWIWRIDPTYRTQDTERQHCFSPLWLAFAILIGGLLLDILISIT 294
           VVA NV+PP++   TNYW+WRIDP+YR ++ ER  CFSPLW+AF+ILIGGL+LD+LISIT
Sbjct: 131 VVAVNVTPPETQPTTNYWVWRIDPSYRQEERER-GCFSPLWVAFSILIGGLMLDVLISIT 190

Query: 295 LGVSALPVNIIIGVIVVLGLGTVFRLALEFFQEWNST----RGSQRVESN--VTIGYFPA 347
           LGVSALPVNIIIGVIVVLGLGT  RL LEF  EW+      R  QR E+N    I Y PA
Sbjct: 191 LGVSALPVNIIIGVIVVLGLGTALRLTLEFCYEWSLRRAVHRAVQRAEANNFSNIAYPPA 240

[Close]

BLAST of Tan0013750.7 vs. TAIR 10
Match: AT2G37950.1 (RING/FYVE/PHD zinc finger superfamily protein )

HSP 1 Score: 67.8 bits (164), Expect = 2.0e-11
Identity = 32/63 (50.79%), Postives = 38/63 (60.32%), Query Frame = 0


Query: 178 TSSSDEQCRICQQEKEEV---LIELGCHCRGGLAKAHRTCIDTWFRTKGSNRCEICQVVA 237
           T+  ++ CRIC    E      IELGC C+  LA AHR C +TWF+ KG   CEICQ VA
Sbjct: 77  TAPPEKDCRICHLGVETSGGGAIELGCSCKDDLAVAHRQCAETWFKIKGDKTCEICQSVA 136

[Close]

BLAST of Tan0013750.7 vs. TAIR 10
Match: AT5G05830.1 (RING/FYVE/PHD zinc finger superfamily protein )

HSP 1 Score: 65.9 bits (159), Expect = 7.5e-11
Identity = 29/65 (44.62%), Postives = 38/65 (58.46%), Query Frame = 0


Query: 179 SSSDEQCRICQQE------KEEVLIELGCHCRGGLAKAHRTCIDTWFRTKGSNRCEICQV 238
           S S+  CRIC         +  V IELGC C+  LA AH+ C +TWF+ KG+  CE+C  
Sbjct: 73  SQSERDCRICHMSLDAANLESGVPIELGCSCKADLAAAHKHCAETWFKIKGNKICEVCGS 132

[Close]

BLAST of Tan0013750.7 vs. TAIR 10
Match: AT5G59000.1 (RING/FYVE/PHD zinc finger superfamily protein )

HSP 1 Score: 60.8 bits (146), Expect = 2.4e-09
Identity = 28/67 (41.79%), Postives = 42/67 (62.69%), Query Frame = 0


Query: 182 DEQCRICQQEKEE-----VLIELGCHCRGGLAKAHRTCIDTWFRTKGSNRCEICQVVAAN 241
           DE+    ++E+EE     + ++LGC C+G L  AH  C +TWF+ KG+  CEIC  +A N
Sbjct: 110 DEEDEEEEEEEEEEEYYGLPLQLGCSCKGDLGVAHSKCAETWFKIKGNMTCEICGAMALN 169

Query: 242 VSPPQSH 244
           V+  QS+
Sbjct: 170 VAGEQSN 176

[Close]

BLAST of Tan0013750.7 vs. TAIR 10
Match: AT5G01070.2 (RING/FYVE/PHD zinc finger superfamily protein )

HSP 1 Score: 58.5 bits (140), Expect = 1.2e-08
Identity = 27/67 (40.30%), Postives = 35/67 (52.24%), Query Frame = 0


Query: 176 STTSSSDEQCRICQQEKEEVLIE------LGCHCRGGLAKAHRTCIDTWFRTKGSNRCEI 235
           S   S ++ CRIC    E    E      LGC C+  L   H+ C DTWF+ KG+  CEI
Sbjct: 69  SIRGSPEKDCRICHLGLESSRHECGDPMVLGCSCKDDLGYVHKQCADTWFKIKGNKTCEI 128

Query: 236 CQVVAAN 237
           C+ +A N
Sbjct: 129 CRSIAQN 135

The following BLAST results are available for this feature:

BLAST of Tan0013750.7 vs.


Match Name	E-value	Identity	Description

BLAST of Tan0013750.7 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038875308.1	1.7e-121	88.80	E3 ubiquitin-protein ligase MARCHF2 isoform X3 [Benincasa hispida]	[more]
XP_022995601.1	4.1e-120	87.35	E3 ubiquitin-protein ligase MARCH2-like isoform X1 [Cucurbita maxima]	[more]
XP_023534486.1	7.1e-120	86.96	E3 ubiquitin-protein ligase MARCH2-like isoform X1 [Cucurbita pepo subsp. pepo]	[more]
XP_038875309.1	2.1e-119	88.42	E3 ubiquitin-protein ligase MARCHF2 isoform X4 [Benincasa hispida]	[more]
XP_022995603.1	1.0e-118	86.96	E3 ubiquitin-protein ligase MARCH2-like isoform X2 [Cucurbita maxima]	[more]

BLAST of Tan0013750.7 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1K2D4	2.0e-120	87.35	E3 ubiquitin-protein ligase MARCH2-like isoform X1 OS=Cucurbita maxima OX=3661 G...	[more]
A0A6J1K8G6	4.9e-119	86.96	E3 ubiquitin-protein ligase MARCH2-like isoform X2 OS=Cucurbita maxima OX=3661 G...	[more]
A0A6J1H2W4	8.4e-119	86.56	E3 ubiquitin-protein ligase MARCH2-like isoform X1 OS=Cucurbita moschata OX=3662...	[more]
A0A6J1E3C4	5.5e-118	84.88	E3 ubiquitin-protein ligase MARCH2 isoform X2 OS=Momordica charantia OX=3673 GN=...	[more]
A0A6J1H4V9	2.1e-117	86.17	E3 ubiquitin-protein ligase MARCH2-like isoform X2 OS=Cucurbita moschata OX=3662...	[more]

BLAST of Tan0013750.7 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G45530.1	3.2e-70	60.58	RING/U-box superfamily protein	[more]
AT2G37950.1	2.0e-11	50.79	RING/FYVE/PHD zinc finger superfamily protein	[more]
AT5G05830.1	7.5e-11	44.62	RING/FYVE/PHD zinc finger superfamily protein	[more]
AT5G59000.1	2.4e-09	41.79	RING/FYVE/PHD zinc finger superfamily protein	[more]
AT5G01070.2	1.2e-08	40.30	RING/FYVE/PHD zinc finger superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR011016	Zinc finger, RING-CH-type	SMART	SM00744	ringv_2	coord: 184..231 e-value: 3.9E-15 score: 66.3
IPR011016	Zinc finger, RING-CH-type	PFAM	PF12906	RINGv	coord: 185..230 e-value: 1.2E-10 score: 41.3
IPR011016	Zinc finger, RING-CH-type	PROSITE	PS51292	ZF_RING_CH	coord: 177..237 score: 19.51239
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	3.30.40.10	Zinc/RING finger domain, C3HC4 (zinc finger)	coord: 170..239 e-value: 1.4E-14 score: 55.4
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 124..139
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 102..139
None	No IPR available	PANTHER	PTHR46214	ZINC FINGER, RING-CH-TYPE	coord: 108..345
None	No IPR available	PANTHER	PTHR46214:SF16	E3 UBIQUITIN-PROTEIN LIGASE MARCH11 ISOFORM X1	coord: 108..345
None	No IPR available	CDD	cd16495	RING_CH-C4HC3_MARCH	coord: 185..231 e-value: 1.30044E-12 score: 60.0336
None	No IPR available	SUPERFAMILY	57850	RING/U-box	coord: 180..233

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Tan0013750	Tan0013750	gene

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Tan0013750.7-five_prime_utr	Tan0013750.7-five_prime_utr-LG07:3878773..3879060	five_prime_UTR

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Tan0013750.7-exon	Tan0013750.7-exon-LG07:3878773..3879617	exon
Tan0013750.7-exon	Tan0013750.7-exon-LG07:3880289..3880423	exon
Tan0013750.7-exon	Tan0013750.7-exon-LG07:3880513..3880555	exon
Tan0013750.7-exon	Tan0013750.7-exon-LG07:3882165..3882221	exon
Tan0013750.7-exon	Tan0013750.7-exon-LG07:3882299..3882416	exon
Tan0013750.7-exon	Tan0013750.7-exon-LG07:3882499..3882876	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Tan0013750.7-cds	Tan0013750.7-cds-LG07:3879061..3879617	CDS
Tan0013750.7-cds	Tan0013750.7-cds-LG07:3880289..3880423	CDS
Tan0013750.7-cds	Tan0013750.7-cds-LG07:3880513..3880555	CDS
Tan0013750.7-cds	Tan0013750.7-cds-LG07:3882165..3882221	CDS
Tan0013750.7-cds	Tan0013750.7-cds-LG07:3882299..3882416	CDS
Tan0013750.7-cds	Tan0013750.7-cds-LG07:3882499..3882629	CDS

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Tan0013750.7-three_prime_utr	Tan0013750.7-three_prime_utr-LG07:3882630..3882876	three_prime_UTR

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Tan0013750.7	Tan0013750.7-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0008270	zinc ion binding