Tan0013750 (gene) Snake gourd v1

Overview
NameTan0013750
Typegene
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionE3 ubiquitin-protein ligase MARCH2-like isoform X1
LocationLG07: 3878214 .. 3882876 (+)
RNA-Seq ExpressionTan0013750
SyntenyTan0013750
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TGGAAGAATAAGAATTTCAACCGCAATGAACACAATAAAAAAAGACAGGATATTTCATAGGAATAATTCAAGAAAGTTCTCATTTGTCTTTTTATTTTTTATTTTTTATTTTTTTCTGTAAGTTGGAAAAAATAAATCAAAGGGGTCGGGTCTCTTTCGATGTGGGAGTGAGATTTGGCGCCTGAATTGCTAAAGCAATATCCTTGTGTTTGTTGAAAGCCATCAAATTACGTGGATCCATATACTCTTCTCATAAATACGTAATTTCCTTGCGTATATAAATTTGGTTTTTCTTTTCTTCTTCTTTGTTTTTCAGTTCATTCAGCGTCTAATCCATTTTTTTTTTATCTCACAAGACTAATCAACCAGTATTCACGACGCAATTTCAGAACCCATTTTTTCTTTGCTTTTCAATTCTCACCTAAAAAAGAGAAAAGTTGGGTTGAAAATTGAAATTGAAATTTTCTCTGTTCATTTTTTCCCATTTTCAGCTCTCTTTCTACTCTGCTTCAACTGTAGAATCTTCAATCCGTCAAATCTAAGTCTACCCAGGTACGACCCCTTTTGATTCTATTCGCTTTTGTTCTCGATTTTGCTACTGTTCTCTCTGTTAACCTCGTTTGTGATTTTGTTCTCGATTGCTGTGTGTAATGCAATTGTTTCGATGGGCTTTTGTGGCTCAGTCGTTTAATTTGTTTGGACTGATTGAAGTTTGGTTGGAGAAAATTATTTCGCTTCAATTTGTTTGGTGGGCTTGGATTTCTGAAATTGGGTTTTGTGAATTGAGGCTGGTTCGTGATTTTCGCTTTGTTTTGGAGTGAATTTTTAAGTTCAATTGTGACATGTAATGCAAATTTTGATTGTATTTGTGTCTCAGTTGTTTGTTTGGACTGGGAGAAATTTTGATAGGTGGAGATTTGGCTTCAATTGGTTGGTGGGTTTGTTTCTCTCTTTATTTCTTTTTCTTTACTGGTGTTGTGGGATGAAGACTGAGTTAAAGAAACTTTGTATTCAATTTAGGGTGAGAGAAATTGGAGAAAGGGATGATGCTCAGAAATGTCAGCTAAGGAATTTTGTTCAATTGATTCAAGTTTGTGGAGTTTGGAATTTGAATGACCTTTCAAAGATGACGGATTGCCATTCGAACGATCCAAAGGCCAACACCATTGCCAATCAGAACGATGAAACCGACCTTGAGAAGCAGAGGGTTGCTCAGCCATTAGCATCAGAGCCCTCTACCAGTGATGCTGATGATCATACACCATTGACAATTGTTGTTTCTAATGGGGAGCCCAAATCAATCTCTGAGGTTCCTGGGACTCCTCAAGAGGAATTATTGCCTTGTGCTGTTTCCCCCAAAAAGGAGCTCTTGTCTACAACTTCTAGTTCTGATGAGCAGTGCAGGTACATTTGAAATGCTGCTTTTCCCTGAAAAAGGCTTTTCTAGTTGTTCTGTTCATTTCTGTTGGTCCATTTTGGCATCACTTTTAGTTAGTTCCTCCTCCTTCCTCCTCTCTTCCTCATCTTGTTGTTATTTATGTTGTTTGTTTCATTGCTTGTCAGCCATAAAACATTAGATAGTCCCAACTTTGATTGCTGAAAATTGATGCTTTCTATGGTTTGTTAAATCACCAATGAATCCAAAAGATTAATCCGAGAGTCAAATATGTGATCTATTAATGTAAATTTTTTTTCTTTTGCTGGGGTTGATATCATGTTGAACTATGATTAAATCTAAAAGTTTTAGTTGATGGGATATATTTACTTTTTTTATACATAGTCTAAGACTAAAACCATCAACATGAGTATAACTCAACAGGTAAGGCATATACTCCTTAGAGGTTTAAGTCTCCACCCCTACATTTGTTGCACTAACGAAATCGTAATGCTATTACTTCTTCTTTTGGAAATCTTACCTAAGTTGTACATTATAAATAACAGTTTTTAAATACTGTTGTCTTTCCATGTAATTTGCATTATAATGGAGTATGTCCACAGTTACCATTGGCTTCATTTATCTGGTTAATGTGTTGTAAAGGAAGTTGAGGCCATTAAGCCTGAGTACTATTATTCAGAATTTGTCAGCAAGAAAAGGAAGAAGTCTTGATAGAACTTGGATGTCATTGTCGAGGTGGTCTCGCAAAAGCTCATCGGACTTGCATAGATACTTGGTTTCGTACTAAAGGATCAAACAGATGTGAGATATGCCAGTAAGTTAGTCTTTTTGAGGATGACATTCATTGACTCAACAGAATCATAGTGGAGGCATTTTGAAATGCTATTTTGCTAACTTTTGCAGGGTTGTAGCAGCGAATGTATCACCTCCACAATCACATCATGGTGTAGGTATTCTGTAGCTTTCGGTGGCAATGCTTTTGATTAGTACTTTTCAATTCCTAGCCTCTTCCATCTTTATTAACTCTAATTGTAAAACTTATAAAATCAAACGCCTCAATGAATATTGAATCAGTATTTTTGTCCTGACTACAGTGTTAGTGTTATTAGTTGATGATCAACATCAGTGTCTTAGTTTTGCATTTGCTACAGTCCCAATAACCATTTGGTTTTTTTTGAAAATTGTGCTTGTTTTCTCATCATTTCTCTACAATTTTCTACAATTGCTTTCATCTTTCTTAAAAAACTATTGAATTCTTAGCAAAATTTCAAAAACAAAAATAAGTTTTTGAAAAATACAGGTAAAAAGTGGATAACAAAACAAGGAAACCCCGAGGTGGAACTAGTATTTATAGGCTTAATTGTCAAAAACCAAATGGTTATTTAAACAGGGCCTACATTTTCTTGCACTTCCATTTCCCACATTAGGAAAATTCTATCATGGCATTTTCATCTCTAATCTTTGCTTATGAGTATTCCTTTAATTTTGACCAAGATGACTTGAACCTATTCTCTCTAAGAACTTTGTTGTTTAGAAGGTCCTTTTTGACCACTAGGCCAAGTCATGGTGGTTGATGTGTCAAACATATAAAATTGCATTAGTGGATTAGTGGTTTATTCAGATTTGAATTGATATAGAAAAAAAGTATTGTAGGCTGAAAACAACTGGTTTATCATTCACAATGCTTCCTCTCCTCTCTAAACTTAGAAATGTTAGCTTTTTAATGAAATACCTTGATAAGAAAGAGGGAGGAGACGTGTAAAGTGGCAAGGAACCATTCACCCTCAAAACTATGTACAAACAAACCTAACTTCTGAACAACTAATTACATGGCTTTTAAAATTTGTTAAGGTTTTGTTTTGATCATGTTAGGGTACTAATAGGGATTTAGGGATAGTAGTAGTATGATATGGGTAATTAGTTAGGGAGTTAGTTAATGTTTGAACATTCTTTTTCGGCTCGCTTCGTTGCTTCATTGGTATGTTCTCCTTCCTCTTGTGGTGTTGCTTTTCCGACTCTGTCCTCGCCGGTGATTTCTCCCTCCTCCCTTTCGGAACAAGATAAACCAAGTATAAGACACTTGGAACCTCCCTTTTGAGTATGCTAACCCAACCCCTAAAAACCACTCAACAATTGCTTACCTTTCCCTCAATCCCACTCCCTCTATTTATAACCAAAAACACTAACTAACTCCCTAACTAACTCCCACTCCCTCTTGAGTATGCATACTCAAGAGGAAGGAGAACATACCAATGAAGCAACGAAGCGAGCCGAAAAAGAATGTTCAAACACTAACTAACTCCTTAACTAATTACCCTAATGCCCCTACTAATACCATACTACTACTATCCCTAAATCTCTATTAGTACCCTAACAGATCGAAAGATACGTTTTCTTTTGCTTTGTATCGTTGCTACCTATAAATTCAAACTATTGATTCGTGAGAATCGCCGCTTAAAACTATATATTTAGCATTAAACTTATGACCTTGATGGAAGGATATGGTATTGGAACTAACCTGAATTTCGATAATTCCTTATATTTGACAAGCACAGACCAACTACTGGATTTGGAGGATTGATCCAACCTACAGAACTCAAGATACTGAAAGGGTAACAAGAATCTCACTTTTCCTGCTTGTTTCGTGAGTAGTCAAAAACATCAACCTTCTTCATAATTATTTATGCAGCAGCACTGTTTCAGTCCACTTTGGCTGGCTTTTGCCATCCTCATAGGAGGTCTCCTACTGGACATTCTTATATCCATCACCCTCGGCGTTTCGGCATTGCCCGTAAATATAATCATTGGTATGTTCATAACTTCTGTCGATCGAGCTATATCTAGTTTCGTGTTGTGCTTTTTTATGGTTATTGAAACCTTGAAGAACAGGAGTTATTGTTGTGCTTGGACTTGGAACTGTGTTTCGGCTTGCCCTGGAGTTCTTTCAGGAGTGGAATTCAACCAGAGGATCGCAAAGAGTGGAATCAAATGTCACTATTGGGTACTTTCCAGCTATATAGTAAGTCTTTGACTGTTTGTTAAAAAAACATGATAAATAAATGAAGTGAAAATATATTTTTTATTCTTGTCTTTTCCCAGATGTATTAACCTCTTGATCAAACATATTAGTAATGGATATTGTGTTCTAATTGTAAATTTGACAATAAATTAGTAAATAGTTTTAGAGAGATTGCAAGTGATCAATAATAGAATATTATGTTTTGACAACGTTTTCTTAATTGTAAATTTTATATTCGTCAAAGTCGG

mRNA sequence

TGGAAGAATAAGAATTTCAACCGCAATGAACACAATAAAAAAAGACAGGATATTTCATAGGAATAATTCAAGAAAGTTCTCATTTGTCTTTTTATTTTTTATTTTTTATTTTTTTCTGTAAGTTGGAAAAAATAAATCAAAGGGGTCGGGTCTCTTTCGATGTGGGAGTGAGATTTGGCGCCTGAATTGCTAAAGCAATATCCTTGTGTTTGTTGAAAGCCATCAAATTACGTGGATCCATATACTCTTCTCATAAATACGTAATTTCCTTGCGTATATAAATTTGGTTTTTCTTTTCTTCTTCTTTGTTTTTCAGTTCATTCAGCGTCTAATCCATTTTTTTTTTATCTCACAAGACTAATCAACCAGTATTCACGACGCAATTTCAGAACCCATTTTTTCTTTGCTTTTCAATTCTCACCTAAAAAAGAGAAAAGTTGGGTTGAAAATTGAAATTGAAATTTTCTCTGTTCATTTTTTCCCATTTTCAGCTCTCTTTCTACTCTGCTTCAACTGTAGAATCTTCAATCCGTCAAATCTAAGTCTACCCAGTTGTTTGTTTGGACTGGGAGAAATTTTGATAGGTGGAGATTTGGCTTCAATTGGTTGGGTGAGAGAAATTGGAGAAAGGGATGATGCTCAGAAATGTCAGCTAAGGAATTTTGTTCAATTGATTCAAGTTTGTGGAGTTTGGAATTTGAATGACCTTTCAAAGATGACGGATTGCCATTCGAACGATCCAAAGGCCAACACCATTGCCAATCAGAACGATGAAACCGACCTTGAGAAGCAGAGGGTTGCTCAGCCATTAGCATCAGAGCCCTCTACCAGTGATGCTGATGATCATACACCATTGACAATTGTTGTTTCTAATGGGGAGCCCAAATCAATCTCTGAGGTTCCTGGGACTCCTCAAGAGGAATTATTGCCTTGTGCTGTTTCCCCCAAAAAGGAGCTCTTGTCTACAACTTCTAGTTCTGATGAGCAGTGCAGAATTTGTCAGCAAGAAAAGGAAGAAGTCTTGATAGAACTTGGATGTCATTGTCGAGGTGGTCTCGCAAAAGCTCATCGGACTTGCATAGATACTTGGTTTCGTACTAAAGGATCAAACAGATGTGAGATATGCCAGGTTGTAGCAGCGAATGTATCACCTCCACAATCACATCATGGTACCAACTACTGGATTTGGAGGATTGATCCAACCTACAGAACTCAAGATACTGAAAGGCAGCACTGTTTCAGTCCACTTTGGCTGGCTTTTGCCATCCTCATAGGAGGTCTCCTACTGGACATTCTTATATCCATCACCCTCGGCGTTTCGGCATTGCCCGTAAATATAATCATTGGAGTTATTGTTGTGCTTGGACTTGGAACTGTGTTTCGGCTTGCCCTGGAGTTCTTTCAGGAGTGGAATTCAACCAGAGGATCGCAAAGAGTGGAATCAAATGTCACTATTGGGTACTTTCCAGCTATATAGTAAGTCTTTGACTGTTTGTTAAAAAAACATGATAAATAAATGAAGTGAAAATATATTTTTTATTCTTGTCTTTTCCCAGATGTATTAACCTCTTGATCAAACATATTAGTAATGGATATTGTGTTCTAATTGTAAATTTGACAATAAATTAGTAAATAGTTTTAGAGAGATTGCAAGTGATCAATAATAGAATATTATGTTTTGACAACGTTTTCTTAATTGTAAATTTTATATTCGTCAAAGTCGG

Coding sequence (CDS)

ATGACGGATTGCCATTCGAACGATCCAAAGGCCAACACCATTGCCAATCAGAACGATGAAACCGACCTTGAGAAGCAGAGGGTTGCTCAGCCATTAGCATCAGAGCCCTCTACCAGTGATGCTGATGATCATACACCATTGACAATTGTTGTTTCTAATGGGGAGCCCAAATCAATCTCTGAGGTTCCTGGGACTCCTCAAGAGGAATTATTGCCTTGTGCTGTTTCCCCCAAAAAGGAGCTCTTGTCTACAACTTCTAGTTCTGATGAGCAGTGCAGAATTTGTCAGCAAGAAAAGGAAGAAGTCTTGATAGAACTTGGATGTCATTGTCGAGGTGGTCTCGCAAAAGCTCATCGGACTTGCATAGATACTTGGTTTCGTACTAAAGGATCAAACAGATGTGAGATATGCCAGGTTGTAGCAGCGAATGTATCACCTCCACAATCACATCATGGTACCAACTACTGGATTTGGAGGATTGATCCAACCTACAGAACTCAAGATACTGAAAGGCAGCACTGTTTCAGTCCACTTTGGCTGGCTTTTGCCATCCTCATAGGAGGTCTCCTACTGGACATTCTTATATCCATCACCCTCGGCGTTTCGGCATTGCCCGTAAATATAATCATTGGAGTTATTGTTGTGCTTGGACTTGGAACTGTGTTTCGGCTTGCCCTGGAGTTCTTTCAGGAGTGGAATTCAACCAGAGGATCGCAAAGAGTGGAATCAAATGTCACTATTGGGTACTTTCCAGCTATATAG

Protein sequence

MTDCHSNDPKANTIANQNDETDLEKQRVAQPLASEPSTSDADDHTPLTIVVSNGEPKSISEVPGTPQEELLPCAVSPKKELLSTTSSSDEQCRICQQEKEEVLIELGCHCRGGLAKAHRTCIDTWFRTKGSNRCEICQVVAANVSPPQSHHGTNYWIWRIDPTYRTQDTERQHCFSPLWLAFAILIGGLLLDILISITLGVSALPVNIIIGVIVVLGLGTVFRLALEFFQEWNSTRGSQRVESNVTIGYFPAI
Homology
BLAST of Tan0013750 vs. NCBI nr
Match: XP_038875308.1 (E3 ubiquitin-protein ligase MARCHF2 isoform X3 [Benincasa hispida])

HSP 1 Score: 446.0 bits (1146), Expect = 2.1e-121
Identity = 230/259 (88.80%), Postives = 237/259 (91.51%), Query Frame = 0

Query: 1   MTDCHSNDPKANTIANQNDETDLEKQRVAQPLAS--EPSTSDADDHTPLTIVVSNGEPKS 60
           M+DCHSND KANT ANQN++ DLEKQRVAQP +S  E ST D DD+T LTIVVS GE K 
Sbjct: 1   MSDCHSNDVKANTGANQNNDGDLEKQRVAQPSSSALELSTRDGDDNTLLTIVVSTGESKP 60

Query: 61  ISEVPGT----PQEELLPCAVSPKKELLSTTSSSDEQCRICQQEKEEVLIELGCHCRGGL 120
           ISEVPG      QE LLPC VSPKKELLSTTSSSDEQCRICQQEKEEVLIELGC+CRGGL
Sbjct: 61  ISEVPGVGTLCSQEGLLPCEVSPKKELLSTTSSSDEQCRICQQEKEEVLIELGCNCRGGL 120

Query: 121 AKAHRTCIDTWFRTKGSNRCEICQVVAANVSPPQSHHGTNYWIWRIDPTYRTQDTERQHC 180
           AKAHRTCIDTWFRTKGSNRCEICQVVAANVSPPQSHHGTNYWIWRIDPTYRTQD +RQHC
Sbjct: 121 AKAHRTCIDTWFRTKGSNRCEICQVVAANVSPPQSHHGTNYWIWRIDPTYRTQDPQRQHC 180

Query: 181 FSPLWLAFAILIGGLLLDILISITLGVSALPVNIIIGVIVVLGLGTVFRLALEFFQEWNS 240
           FSPLWLAFAILIGGLLLDILISITLGVSALPVNIIIGVIVVLGLGTVFRLALEFFQEWNS
Sbjct: 181 FSPLWLAFAILIGGLLLDILISITLGVSALPVNIIIGVIVVLGLGTVFRLALEFFQEWNS 240

Query: 241 TRGSQRVESNVTIGYFPAI 254
           TRGSQRVESNVTIGYFPAI
Sbjct: 241 TRGSQRVESNVTIGYFPAI 259

BLAST of Tan0013750 vs. NCBI nr
Match: XP_022995601.1 (E3 ubiquitin-protein ligase MARCH2-like isoform X1 [Cucurbita maxima])

HSP 1 Score: 441.8 bits (1135), Expect = 4.0e-120
Identity = 221/253 (87.35%), Postives = 233/253 (92.09%), Query Frame = 0

Query: 1   MTDCHSNDPKANTIANQNDETDLEKQRVAQPLASEPSTSDADDHTPLTIVVSNGEPKSIS 60
           M+DCH ND K NT A +N+E DLEKQRV  P A++PSTSD DDHTPLTIVVSNGE KS+S
Sbjct: 1   MSDCHLNDVKGNTSAEKNNEADLEKQRVELPSAADPSTSDVDDHTPLTIVVSNGELKSVS 60

Query: 61  EVPGTPQEELLPCAVSPKKELLSTTSSSDEQCRICQQEKEEVLIELGCHCRGGLAKAHRT 120
           EV   P+E+LLPCAVSP KELLSTTSSSDEQCRICQQEKEEVLIELGCHCRGGLAKAHRT
Sbjct: 61  EV---PREKLLPCAVSPMKELLSTTSSSDEQCRICQQEKEEVLIELGCHCRGGLAKAHRT 120

Query: 121 CIDTWFRTKGSNRCEICQVVAANVSPPQSHHGTNYWIWRIDPTYRTQDTERQHCFSPLWL 180
           CIDTWFR+KGSNRCEICQVVAANVSPPQSHH TNYWIWRIDPTYRTQ+ ERQ  FSPLWL
Sbjct: 121 CIDTWFRSKGSNRCEICQVVAANVSPPQSHHATNYWIWRIDPTYRTQEPERQRYFSPLWL 180

Query: 181 AFAILIGGLLLDILISITLGVSALPVNIIIGVIVVLGLGTVFRLALEFFQEWNSTRGSQR 240
           AFAILIGGLLLDIL+SITLG+SALPVNIIIGVIVVLGLGTV RLALEFFQEWNSTRGSQR
Sbjct: 181 AFAILIGGLLLDILVSITLGISALPVNIIIGVIVVLGLGTVLRLALEFFQEWNSTRGSQR 240

Query: 241 VESNVTIGYFPAI 254
           VESNVTIGYFPAI
Sbjct: 241 VESNVTIGYFPAI 250

BLAST of Tan0013750 vs. NCBI nr
Match: XP_023534486.1 (E3 ubiquitin-protein ligase MARCH2-like isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 441.0 bits (1133), Expect = 6.7e-120
Identity = 220/253 (86.96%), Postives = 234/253 (92.49%), Query Frame = 0

Query: 1   MTDCHSNDPKANTIANQNDETDLEKQRVAQPLASEPSTSDADDHTPLTIVVSNGEPKSIS 60
           M+DCH ND K NT A++N+E DLEKQRV  P A++PSTSD DDHTPLTIVVSNGE KSIS
Sbjct: 1   MSDCHLNDVKGNTSADKNNEADLEKQRVELPSAADPSTSDVDDHTPLTIVVSNGELKSIS 60

Query: 61  EVPGTPQEELLPCAVSPKKELLSTTSSSDEQCRICQQEKEEVLIELGCHCRGGLAKAHRT 120
           EV   P+EELLPCAVSP KELLSTTSSSDEQCRICQQEKEEVLIELGCHCRGGLAKAHRT
Sbjct: 61  EV---PREELLPCAVSPMKELLSTTSSSDEQCRICQQEKEEVLIELGCHCRGGLAKAHRT 120

Query: 121 CIDTWFRTKGSNRCEICQVVAANVSPPQSHHGTNYWIWRIDPTYRTQDTERQHCFSPLWL 180
           CIDTWFR+KGSNRCEICQVVAANVSPPQSHH TNYWIWRIDPTYRTQ+ ERQ  FSP+WL
Sbjct: 121 CIDTWFRSKGSNRCEICQVVAANVSPPQSHHATNYWIWRIDPTYRTQEPERQRYFSPIWL 180

Query: 181 AFAILIGGLLLDILISITLGVSALPVNIIIGVIVVLGLGTVFRLALEFFQEWNSTRGSQR 240
           AFAILIGGLLLDIL+SITLG+SALPVN+IIGVIVVLGLGTV RLALEFFQEWNSTRGS+R
Sbjct: 181 AFAILIGGLLLDILVSITLGISALPVNLIIGVIVVLGLGTVLRLALEFFQEWNSTRGSRR 240

Query: 241 VESNVTIGYFPAI 254
           VESNVTIGYFPAI
Sbjct: 241 VESNVTIGYFPAI 250

BLAST of Tan0013750 vs. NCBI nr
Match: XP_038875309.1 (E3 ubiquitin-protein ligase MARCHF2 isoform X4 [Benincasa hispida])

HSP 1 Score: 439.5 bits (1129), Expect = 2.0e-119
Identity = 229/259 (88.42%), Postives = 236/259 (91.12%), Query Frame = 0

Query: 1   MTDCHSNDPKANTIANQNDETDLEKQRVAQPLAS--EPSTSDADDHTPLTIVVSNGEPKS 60
           M+DCHSND KANT ANQN++ DLEKQRVAQP +S  E ST D DD+T LTIVVS GE K 
Sbjct: 1   MSDCHSNDVKANTGANQNNDGDLEKQRVAQPSSSALELSTRDGDDNTLLTIVVSTGESKP 60

Query: 61  ISEVPGT----PQEELLPCAVSPKKELLSTTSSSDEQCRICQQEKEEVLIELGCHCRGGL 120
           ISEVPG      QE LLPC VSPKKELLSTTSSSDEQCRICQQEKEEVLIELGC+CRGGL
Sbjct: 61  ISEVPGVGTLCSQEGLLPCEVSPKKELLSTTSSSDEQCRICQQEKEEVLIELGCNCRGGL 120

Query: 121 AKAHRTCIDTWFRTKGSNRCEICQVVAANVSPPQSHHGTNYWIWRIDPTYRTQDTERQHC 180
           AKAHRTCIDTWFRTKGSNRCEICQVVAANVSPPQSHHGTNYWIWRIDPTYRTQD +R HC
Sbjct: 121 AKAHRTCIDTWFRTKGSNRCEICQVVAANVSPPQSHHGTNYWIWRIDPTYRTQDPQR-HC 180

Query: 181 FSPLWLAFAILIGGLLLDILISITLGVSALPVNIIIGVIVVLGLGTVFRLALEFFQEWNS 240
           FSPLWLAFAILIGGLLLDILISITLGVSALPVNIIIGVIVVLGLGTVFRLALEFFQEWNS
Sbjct: 181 FSPLWLAFAILIGGLLLDILISITLGVSALPVNIIIGVIVVLGLGTVFRLALEFFQEWNS 240

Query: 241 TRGSQRVESNVTIGYFPAI 254
           TRGSQRVESNVTIGYFPAI
Sbjct: 241 TRGSQRVESNVTIGYFPAI 258

BLAST of Tan0013750 vs. NCBI nr
Match: XP_022995603.1 (E3 ubiquitin-protein ligase MARCH2-like isoform X2 [Cucurbita maxima])

HSP 1 Score: 437.2 bits (1123), Expect = 9.7e-119
Identity = 220/253 (86.96%), Postives = 234/253 (92.49%), Query Frame = 0

Query: 1   MTDCHSNDPKANTIANQNDETDLEKQRVAQPLASEPSTSDADDHTPLTIVVSNGEPKSIS 60
           M+DCH ND K NT A +N+E DLEKQRV  P A++PSTSD DDHTPLTIVVSNGE KS+S
Sbjct: 1   MSDCHLNDVKGNTSAEKNNEADLEKQRVELPSAADPSTSDVDDHTPLTIVVSNGELKSVS 60

Query: 61  EVPGTPQEELLPCAVSPKKELLSTTSSSDEQCRICQQEKEEVLIELGCHCRGGLAKAHRT 120
           EV   P+E+LLPCAVSP KELLSTTSSSDEQCRICQQEKEEVLIELGCHCRGGLAKAHRT
Sbjct: 61  EV---PREKLLPCAVSPMKELLSTTSSSDEQCRICQQEKEEVLIELGCHCRGGLAKAHRT 120

Query: 121 CIDTWFRTKGSNRCEICQVVAANVSPPQSHHGTNYWIWRIDPTYRTQDTERQHCFSPLWL 180
           CIDTWFR+KGSNRCEICQVVAANVSPPQSHH TNYWIWRIDPTYRTQ+ ER++ FSPLWL
Sbjct: 121 CIDTWFRSKGSNRCEICQVVAANVSPPQSHHATNYWIWRIDPTYRTQEPERRY-FSPLWL 180

Query: 181 AFAILIGGLLLDILISITLGVSALPVNIIIGVIVVLGLGTVFRLALEFFQEWNSTRGSQR 240
           AFAILIGGLLLDIL+SITLG+SALPVNIIIGVIVVLGLGTV RLALEFFQEWNSTRGSQR
Sbjct: 181 AFAILIGGLLLDILVSITLGISALPVNIIIGVIVVLGLGTVLRLALEFFQEWNSTRGSQR 240

Query: 241 VESNVTIGYFPAI 254
           VESNVTIGYFPAI
Sbjct: 241 VESNVTIGYFPAI 249

BLAST of Tan0013750 vs. ExPASy TrEMBL
Match: A0A6J1K2D4 (E3 ubiquitin-protein ligase MARCH2-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111491089 PE=4 SV=1)

HSP 1 Score: 441.8 bits (1135), Expect = 1.9e-120
Identity = 221/253 (87.35%), Postives = 233/253 (92.09%), Query Frame = 0

Query: 1   MTDCHSNDPKANTIANQNDETDLEKQRVAQPLASEPSTSDADDHTPLTIVVSNGEPKSIS 60
           M+DCH ND K NT A +N+E DLEKQRV  P A++PSTSD DDHTPLTIVVSNGE KS+S
Sbjct: 1   MSDCHLNDVKGNTSAEKNNEADLEKQRVELPSAADPSTSDVDDHTPLTIVVSNGELKSVS 60

Query: 61  EVPGTPQEELLPCAVSPKKELLSTTSSSDEQCRICQQEKEEVLIELGCHCRGGLAKAHRT 120
           EV   P+E+LLPCAVSP KELLSTTSSSDEQCRICQQEKEEVLIELGCHCRGGLAKAHRT
Sbjct: 61  EV---PREKLLPCAVSPMKELLSTTSSSDEQCRICQQEKEEVLIELGCHCRGGLAKAHRT 120

Query: 121 CIDTWFRTKGSNRCEICQVVAANVSPPQSHHGTNYWIWRIDPTYRTQDTERQHCFSPLWL 180
           CIDTWFR+KGSNRCEICQVVAANVSPPQSHH TNYWIWRIDPTYRTQ+ ERQ  FSPLWL
Sbjct: 121 CIDTWFRSKGSNRCEICQVVAANVSPPQSHHATNYWIWRIDPTYRTQEPERQRYFSPLWL 180

Query: 181 AFAILIGGLLLDILISITLGVSALPVNIIIGVIVVLGLGTVFRLALEFFQEWNSTRGSQR 240
           AFAILIGGLLLDIL+SITLG+SALPVNIIIGVIVVLGLGTV RLALEFFQEWNSTRGSQR
Sbjct: 181 AFAILIGGLLLDILVSITLGISALPVNIIIGVIVVLGLGTVLRLALEFFQEWNSTRGSQR 240

Query: 241 VESNVTIGYFPAI 254
           VESNVTIGYFPAI
Sbjct: 241 VESNVTIGYFPAI 250

BLAST of Tan0013750 vs. ExPASy TrEMBL
Match: A0A6J1K8G6 (E3 ubiquitin-protein ligase MARCH2-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111491089 PE=4 SV=1)

HSP 1 Score: 437.2 bits (1123), Expect = 4.7e-119
Identity = 220/253 (86.96%), Postives = 234/253 (92.49%), Query Frame = 0

Query: 1   MTDCHSNDPKANTIANQNDETDLEKQRVAQPLASEPSTSDADDHTPLTIVVSNGEPKSIS 60
           M+DCH ND K NT A +N+E DLEKQRV  P A++PSTSD DDHTPLTIVVSNGE KS+S
Sbjct: 1   MSDCHLNDVKGNTSAEKNNEADLEKQRVELPSAADPSTSDVDDHTPLTIVVSNGELKSVS 60

Query: 61  EVPGTPQEELLPCAVSPKKELLSTTSSSDEQCRICQQEKEEVLIELGCHCRGGLAKAHRT 120
           EV   P+E+LLPCAVSP KELLSTTSSSDEQCRICQQEKEEVLIELGCHCRGGLAKAHRT
Sbjct: 61  EV---PREKLLPCAVSPMKELLSTTSSSDEQCRICQQEKEEVLIELGCHCRGGLAKAHRT 120

Query: 121 CIDTWFRTKGSNRCEICQVVAANVSPPQSHHGTNYWIWRIDPTYRTQDTERQHCFSPLWL 180
           CIDTWFR+KGSNRCEICQVVAANVSPPQSHH TNYWIWRIDPTYRTQ+ ER++ FSPLWL
Sbjct: 121 CIDTWFRSKGSNRCEICQVVAANVSPPQSHHATNYWIWRIDPTYRTQEPERRY-FSPLWL 180

Query: 181 AFAILIGGLLLDILISITLGVSALPVNIIIGVIVVLGLGTVFRLALEFFQEWNSTRGSQR 240
           AFAILIGGLLLDIL+SITLG+SALPVNIIIGVIVVLGLGTV RLALEFFQEWNSTRGSQR
Sbjct: 181 AFAILIGGLLLDILVSITLGISALPVNIIIGVIVVLGLGTVLRLALEFFQEWNSTRGSQR 240

Query: 241 VESNVTIGYFPAI 254
           VESNVTIGYFPAI
Sbjct: 241 VESNVTIGYFPAI 249

BLAST of Tan0013750 vs. ExPASy TrEMBL
Match: A0A6J1H2W4 (E3 ubiquitin-protein ligase MARCH2-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111459604 PE=4 SV=1)

HSP 1 Score: 436.4 bits (1121), Expect = 8.0e-119
Identity = 219/253 (86.56%), Postives = 231/253 (91.30%), Query Frame = 0

Query: 1   MTDCHSNDPKANTIANQNDETDLEKQRVAQPLASEPSTSDADDHTPLTIVVSNGEPKSIS 60
           M DCH ND K NT A++N+  DLEKQRV  P A++PSTSD DDHTPLTIVVSNGE KSIS
Sbjct: 1   MLDCHLNDLKGNTSADKNNGADLEKQRVELPSAADPSTSDVDDHTPLTIVVSNGELKSIS 60

Query: 61  EVPGTPQEELLPCAVSPKKELLSTTSSSDEQCRICQQEKEEVLIELGCHCRGGLAKAHRT 120
           EV   P+EELLPCAVSP KELLSTTSSSDEQCRICQQEKEEVLIELGCHCRGGLAKAHRT
Sbjct: 61  EV---PREELLPCAVSPMKELLSTTSSSDEQCRICQQEKEEVLIELGCHCRGGLAKAHRT 120

Query: 121 CIDTWFRTKGSNRCEICQVVAANVSPPQSHHGTNYWIWRIDPTYRTQDTERQHCFSPLWL 180
           CIDTWFR+KGSNRCEICQVVAANVSPPQSHH TNYWIWRIDPTYRTQ+ ERQ  FSP+WL
Sbjct: 121 CIDTWFRSKGSNRCEICQVVAANVSPPQSHHATNYWIWRIDPTYRTQEPERQSYFSPIWL 180

Query: 181 AFAILIGGLLLDILISITLGVSALPVNIIIGVIVVLGLGTVFRLALEFFQEWNSTRGSQR 240
           AFAILIGGLLLDIL+SITLG+SALPVN+IIGVIVVLGLGTV RLALEFF EWNSTRGSQR
Sbjct: 181 AFAILIGGLLLDILVSITLGISALPVNLIIGVIVVLGLGTVLRLALEFFHEWNSTRGSQR 240

Query: 241 VESNVTIGYFPAI 254
           VESNVTIGYFPAI
Sbjct: 241 VESNVTIGYFPAI 250

BLAST of Tan0013750 vs. ExPASy TrEMBL
Match: A0A6J1E3C4 (E3 ubiquitin-protein ligase MARCH2 isoform X2 OS=Momordica charantia OX=3673 GN=LOC111026101 PE=4 SV=1)

HSP 1 Score: 433.3 bits (1113), Expect = 6.8e-118
Identity = 219/258 (84.88%), Postives = 230/258 (89.15%), Query Frame = 0

Query: 1   MTDCHSNDPKANTIANQNDETDLEKQRVAQPLASEPSTSDADDHTPLTIVVSNGEPKSIS 60
           M++C SND K +TIAN +DE+DLEKQR AQP ASEPS SDADDHT LTIVVS GEPK +S
Sbjct: 1   MSECPSNDVKTSTIANSSDESDLEKQRGAQPSASEPSASDADDHTRLTIVVSTGEPKPVS 60

Query: 61  EVPGT-----PQEELLPCAVSPKKELLSTTSSSDEQCRICQQEKEEVLIELGCHCRGGLA 120
           EVP T       EE  P  VSPKKELLS  SSSDEQCRICQQEKEE LIELGC CRGGLA
Sbjct: 61  EVPTTTATRLSHEEESPGIVSPKKELLSMASSSDEQCRICQQEKEEALIELGCQCRGGLA 120

Query: 121 KAHRTCIDTWFRTKGSNRCEICQVVAANVSPPQSHHGTNYWIWRIDPTYRTQDTERQHCF 180
           KAHRTCIDTWFRTKGSNRCEICQV+AANVSPPQSHHGTNYWIWRIDPTYRTQD ERQHCF
Sbjct: 121 KAHRTCIDTWFRTKGSNRCEICQVIAANVSPPQSHHGTNYWIWRIDPTYRTQDPERQHCF 180

Query: 181 SPLWLAFAILIGGLLLDILISITLGVSALPVNIIIGVIVVLGLGTVFRLALEFFQEWNST 240
           SPLWLAFAILIGGLLLD+LISITLGVSALPVNIIIGVIVVLGLGTVFRLALEFFQEW+ST
Sbjct: 181 SPLWLAFAILIGGLLLDVLISITLGVSALPVNIIIGVIVVLGLGTVFRLALEFFQEWSST 240

Query: 241 RGSQRVESNVTIGYFPAI 254
           RG QRVESN+TIGY+PAI
Sbjct: 241 RGLQRVESNITIGYYPAI 258

BLAST of Tan0013750 vs. ExPASy TrEMBL
Match: A0A6J1H4V9 (E3 ubiquitin-protein ligase MARCH2-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111459604 PE=4 SV=1)

HSP 1 Score: 431.8 bits (1109), Expect = 2.0e-117
Identity = 218/253 (86.17%), Postives = 231/253 (91.30%), Query Frame = 0

Query: 1   MTDCHSNDPKANTIANQNDETDLEKQRVAQPLASEPSTSDADDHTPLTIVVSNGEPKSIS 60
           M DCH ND K NT A++N+  DLEKQRV  P A++PSTSD DDHTPLTIVVSNGE KSIS
Sbjct: 1   MLDCHLNDLKGNTSADKNNGADLEKQRVELPSAADPSTSDVDDHTPLTIVVSNGELKSIS 60

Query: 61  EVPGTPQEELLPCAVSPKKELLSTTSSSDEQCRICQQEKEEVLIELGCHCRGGLAKAHRT 120
           EV   P+EELLPCAVSP KELLSTTSSSDEQCRICQQEKEEVLIELGCHCRGGLAKAHRT
Sbjct: 61  EV---PREELLPCAVSPMKELLSTTSSSDEQCRICQQEKEEVLIELGCHCRGGLAKAHRT 120

Query: 121 CIDTWFRTKGSNRCEICQVVAANVSPPQSHHGTNYWIWRIDPTYRTQDTERQHCFSPLWL 180
           CIDTWFR+KGSNRCEICQVVAANVSPPQSHH TNYWIWRIDPTYRTQ+ ER + FSP+WL
Sbjct: 121 CIDTWFRSKGSNRCEICQVVAANVSPPQSHHATNYWIWRIDPTYRTQEPERSY-FSPIWL 180

Query: 181 AFAILIGGLLLDILISITLGVSALPVNIIIGVIVVLGLGTVFRLALEFFQEWNSTRGSQR 240
           AFAILIGGLLLDIL+SITLG+SALPVN+IIGVIVVLGLGTV RLALEFF EWNSTRGSQR
Sbjct: 181 AFAILIGGLLLDILVSITLGISALPVNLIIGVIVVLGLGTVLRLALEFFHEWNSTRGSQR 240

Query: 241 VESNVTIGYFPAI 254
           VESNVTIGYFPAI
Sbjct: 241 VESNVTIGYFPAI 249

BLAST of Tan0013750 vs. TAIR 10
Match: AT2G45530.1 (RING/U-box superfamily protein )

HSP 1 Score: 263.1 bits (671), Expect = 2.3e-70
Identity = 146/241 (60.58%), Postives = 175/241 (72.61%), Query Frame = 0

Query: 22  DLEKQRVAQPLASEP--STSDADDHTPLTIVVSNGEPKSISEVPGTPQEELLPCAVSPKK 81
           DLEKQ+  Q     P   +  A++   LTIVV NG+         + +EEL+   + P+K
Sbjct: 11  DLEKQQQQQQKDKSPQKQSESANESNHLTIVVCNGD---------SSREELVG-QIPPEK 70

Query: 82  EL-LSTTSSSDEQCRICQQEKEEVLIELGCHCRGGLAKAHRTCIDTWFRTKGSNRCEICQ 141
           E+ LS   SS EQCR+C Q+KEEVLIELGC CRGGLAKAHR+CID WFRTKGSN+CEICQ
Sbjct: 71  EVSLSRNGSSHEQCRVCLQDKEEVLIELGCQCRGGLAKAHRSCIDAWFRTKGSNQCEICQ 130

Query: 142 VVAANVSPPQSHHGTNYWIWRIDPTYRTQDTERQHCFSPLWLAFAILIGGLLLDILISIT 201
           VVA NV+PP++   TNYW+WRIDP+YR ++ ER  CFSPLW+AF+ILIGGL+LD+LISIT
Sbjct: 131 VVAVNVTPPETQPTTNYWVWRIDPSYRQEERER-GCFSPLWVAFSILIGGLMLDVLISIT 190

Query: 202 LGVSALPVNIIIGVIVVLGLGTVFRLALEFFQEWNST----RGSQRVESN--VTIGYFPA 254
           LGVSALPVNIIIGVIVVLGLGT  RL LEF  EW+      R  QR E+N    I Y PA
Sbjct: 191 LGVSALPVNIIIGVIVVLGLGTALRLTLEFCYEWSLRRAVHRAVQRAEANNFSNIAYPPA 240

BLAST of Tan0013750 vs. TAIR 10
Match: AT2G37950.1 (RING/FYVE/PHD zinc finger superfamily protein )

HSP 1 Score: 67.8 bits (164), Expect = 1.4e-11
Identity = 32/63 (50.79%), Postives = 38/63 (60.32%), Query Frame = 0

Query: 85  TSSSDEQCRICQQEKEEV---LIELGCHCRGGLAKAHRTCIDTWFRTKGSNRCEICQVVA 144
           T+  ++ CRIC    E      IELGC C+  LA AHR C +TWF+ KG   CEICQ VA
Sbjct: 77  TAPPEKDCRICHLGVETSGGGAIELGCSCKDDLAVAHRQCAETWFKIKGDKTCEICQSVA 136

BLAST of Tan0013750 vs. TAIR 10
Match: AT5G05830.1 (RING/FYVE/PHD zinc finger superfamily protein )

HSP 1 Score: 65.9 bits (159), Expect = 5.5e-11
Identity = 29/65 (44.62%), Postives = 38/65 (58.46%), Query Frame = 0

Query: 86  SSSDEQCRICQQE------KEEVLIELGCHCRGGLAKAHRTCIDTWFRTKGSNRCEICQV 145
           S S+  CRIC         +  V IELGC C+  LA AH+ C +TWF+ KG+  CE+C  
Sbjct: 73  SQSERDCRICHMSLDAANLESGVPIELGCSCKADLAAAHKHCAETWFKIKGNKICEVCGS 132

BLAST of Tan0013750 vs. TAIR 10
Match: AT5G59000.1 (RING/FYVE/PHD zinc finger superfamily protein )

HSP 1 Score: 60.8 bits (146), Expect = 1.8e-09
Identity = 28/67 (41.79%), Postives = 42/67 (62.69%), Query Frame = 0

Query: 89  DEQCRICQQEKEE-----VLIELGCHCRGGLAKAHRTCIDTWFRTKGSNRCEICQVVAAN 148
           DE+    ++E+EE     + ++LGC C+G L  AH  C +TWF+ KG+  CEIC  +A N
Sbjct: 110 DEEDEEEEEEEEEEEYYGLPLQLGCSCKGDLGVAHSKCAETWFKIKGNMTCEICGAMALN 169

Query: 149 VSPPQSH 151
           V+  QS+
Sbjct: 170 VAGEQSN 176

BLAST of Tan0013750 vs. TAIR 10
Match: AT5G01070.2 (RING/FYVE/PHD zinc finger superfamily protein )

HSP 1 Score: 58.5 bits (140), Expect = 8.8e-09
Identity = 27/67 (40.30%), Postives = 35/67 (52.24%), Query Frame = 0

Query: 83  STTSSSDEQCRICQQEKEEVLIE------LGCHCRGGLAKAHRTCIDTWFRTKGSNRCEI 142
           S   S ++ CRIC    E    E      LGC C+  L   H+ C DTWF+ KG+  CEI
Sbjct: 69  SIRGSPEKDCRICHLGLESSRHECGDPMVLGCSCKDDLGYVHKQCADTWFKIKGNKTCEI 128

Query: 143 CQVVAAN 144
           C+ +A N
Sbjct: 129 CRSIAQN 135

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
XP_038875308.12.1e-12188.80E3 ubiquitin-protein ligase MARCHF2 isoform X3 [Benincasa hispida][more]
XP_022995601.14.0e-12087.35E3 ubiquitin-protein ligase MARCH2-like isoform X1 [Cucurbita maxima][more]
XP_023534486.16.7e-12086.96E3 ubiquitin-protein ligase MARCH2-like isoform X1 [Cucurbita pepo subsp. pepo][more]
XP_038875309.12.0e-11988.42E3 ubiquitin-protein ligase MARCHF2 isoform X4 [Benincasa hispida][more]
XP_022995603.19.7e-11986.96E3 ubiquitin-protein ligase MARCH2-like isoform X2 [Cucurbita maxima][more]
Match NameE-valueIdentityDescription
A0A6J1K2D41.9e-12087.35E3 ubiquitin-protein ligase MARCH2-like isoform X1 OS=Cucurbita maxima OX=3661 G... [more]
A0A6J1K8G64.7e-11986.96E3 ubiquitin-protein ligase MARCH2-like isoform X2 OS=Cucurbita maxima OX=3661 G... [more]
A0A6J1H2W48.0e-11986.56E3 ubiquitin-protein ligase MARCH2-like isoform X1 OS=Cucurbita moschata OX=3662... [more]
A0A6J1E3C46.8e-11884.88E3 ubiquitin-protein ligase MARCH2 isoform X2 OS=Momordica charantia OX=3673 GN=... [more]
A0A6J1H4V92.0e-11786.17E3 ubiquitin-protein ligase MARCH2-like isoform X2 OS=Cucurbita moschata OX=3662... [more]
Match NameE-valueIdentityDescription
AT2G45530.12.3e-7060.58RING/U-box superfamily protein [more]
AT2G37950.11.4e-1150.79RING/FYVE/PHD zinc finger superfamily protein [more]
AT5G05830.15.5e-1144.62RING/FYVE/PHD zinc finger superfamily protein [more]
AT5G59000.11.8e-0941.79RING/FYVE/PHD zinc finger superfamily protein [more]
AT5G01070.28.8e-0940.30RING/FYVE/PHD zinc finger superfamily protein [more]
InterPro
Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011016Zinc finger, RING-CH-typeSMARTSM00744ringv_2coord: 184..231
e-value: 3.9E-15
score: 66.3
IPR011016Zinc finger, RING-CH-typePFAMPF12906RINGvcoord: 185..230
e-value: 1.4E-10
score: 41.1
IPR011016Zinc finger, RING-CH-typePROSITEPS51292ZF_RING_CHcoord: 177..237
score: 19.51239
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10Zinc/RING finger domain, C3HC4 (zinc finger)coord: 170..239
e-value: 1.6E-14
score: 55.2
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 124..139
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 102..139
NoneNo IPR availablePANTHERPTHR46214ZINC FINGER, RING-CH-TYPEcoord: 109..307
NoneNo IPR availablePANTHERPTHR46214:SF16E3 UBIQUITIN-PROTEIN LIGASE MARCH11 ISOFORM X1coord: 109..307
NoneNo IPR availableCDDcd16495RING_CH-C4HC3_MARCHcoord: 185..231
e-value: 1.17961E-11
score: 57.3372
NoneNo IPR availableSUPERFAMILY57850RING/U-boxcoord: 180..233

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Tan0013750.1Tan0013750.1mRNA
Tan0013750.3Tan0013750.3mRNA
Tan0013750.4Tan0013750.4mRNA
Tan0013750.6Tan0013750.6mRNA
Tan0013750.2Tan0013750.2mRNA
Tan0013750.5Tan0013750.5mRNA
Tan0013750.7Tan0013750.7mRNA
Tan0013750.8Tan0013750.8mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0016021 integral component of membrane
molecular_function GO:0008270 zinc ion binding