Tan0013750 (gene) Snake gourd v1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TGGAAGAATAAGAATTTCAACCGCAATGAACACAATAAAAAAAGACAGGATATTTCATAGGAATAATTCAAGAAAGTTCTCATTTGTCTTTTTATTTTTTATTTTTTATTTTTTTCTGTAAGTTGGAAAAAATAAATCAAAGGGGTCGGGTCTCTTTCGATGTGGGAGTGAGATTTGGCGCCTGAATTGCTAAAGCAATATCCTTGTGTTTGTTGAAAGCCATCAAATTACGTGGATCCATATACTCTTCTCATAAATACGTAATTTCCTTGCGTATATAAATTTGGTTTTTCTTTTCTTCTTCTTTGTTTTTCAGTTCATTCAGCGTCTAATCCATTTTTTTTTTATCTCACAAGACTAATCAACCAGTATTCACGACGCAATTTCAGAACCCATTTTTTCTTTGCTTTTCAATTCTCACCTAAAAAAGAGAAAAGTTGGGTTGAAAATTGAAATTGAAATTTTCTCTGTTCATTTTTTCCCATTTTCAGCTCTCTTTCTACTCTGCTTCAACTGTAGAATCTTCAATCCGTCAAATCTAAGTCTACCCAGGTACGACCCCTTTTGATTCTATTCGCTTTTGTTCTCGATTTTGCTACTGTTCTCTCTGTTAACCTCGTTTGTGATTTTGTTCTCGATTGCTGTGTGTAATGCAATTGTTTCGATGGGCTTTTGTGGCTCAGTCGTTTAATTTGTTTGGACTGATTGAAGTTTGGTTGGAGAAAATTATTTCGCTTCAATTTGTTTGGTGGGCTTGGATTTCTGAAATTGGGTTTTGTGAATTGAGGCTGGTTCGTGATTTTCGCTTTGTTTTGGAGTGAATTTTTAAGTTCAATTGTGACATGTAATGCAAATTTTGATTGTATTTGTGTCTCAGTTGTTTGTTTGGACTGGGAGAAATTTTGATAGGTGGAGATTTGGCTTCAATTGGTTGGTGGGTTTGTTTCTCTCTTTATTTCTTTTTCTTTACTGGTGTTGTGGGATGAAGACTGAGTTAAAGAAACTTTGTATTCAATTTAGGGTGAGAGAAATTGGAGAAAGGGATGATGCTCAGAAATGTCAGCTAAGGAATTTTGTTCAATTGATTCAAGTTTGTGGAGTTTGGAATTTGAATGACCTTTCAAAGATGACGGATTGCCATTCGAACGATCCAAAGGCCAACACCATTGCCAATCAGAACGATGAAACCGACCTTGAGAAGCAGAGGGTTGCTCAGCCATTAGCATCAGAGCCCTCTACCAGTGATGCTGATGATCATACACCATTGACAATTGTTGTTTCTAATGGGGAGCCCAAATCAATCTCTGAGGTTCCTGGGACTCCTCAAGAGGAATTATTGCCTTGTGCTGTTTCCCCCAAAAAGGAGCTCTTGTCTACAACTTCTAGTTCTGATGAGCAGTGCAGGTACATTTGAAATGCTGCTTTTCCCTGAAAAAGGCTTTTCTAGTTGTTCTGTTCATTTCTGTTGGTCCATTTTGGCATCACTTTTAGTTAGTTCCTCCTCCTTCCTCCTCTCTTCCTCATCTTGTTGTTATTTATGTTGTTTGTTTCATTGCTTGTCAGCCATAAAACATTAGATAGTCCCAACTTTGATTGCTGAAAATTGATGCTTTCTATGGTTTGTTAAATCACCAATGAATCCAAAAGATTAATCCGAGAGTCAAATATGTGATCTATTAATGTAAATTTTTTTTCTTTTGCTGGGGTTGATATCATGTTGAACTATGATTAAATCTAAAAGTTTTAGTTGATGGGATATATTTACTTTTTTTATACATAGTCTAAGACTAAAACCATCAACATGAGTATAACTCAACAGGTAAGGCATATACTCCTTAGAGGTTTAAGTCTCCACCCCTACATTTGTTGCACTAACGAAATCGTAATGCTATTACTTCTTCTTTTGGAAATCTTACCTAAGTTGTACATTATAAATAACAGTTTTTAAATACTGTTGTCTTTCCATGTAATTTGCATTATAATGGAGTATGTCCACAGTTACCATTGGCTTCATTTATCTGGTTAATGTGTTGTAAAGGAAGTTGAGGCCATTAAGCCTGAGTACTATTATTCAGAATTTGTCAGCAAGAAAAGGAAGAAGTCTTGATAGAACTTGGATGTCATTGTCGAGGTGGTCTCGCAAAAGCTCATCGGACTTGCATAGATACTTGGTTTCGTACTAAAGGATCAAACAGATGTGAGATATGCCAGTAAGTTAGTCTTTTTGAGGATGACATTCATTGACTCAACAGAATCATAGTGGAGGCATTTTGAAATGCTATTTTGCTAACTTTTGCAGGGTTGTAGCAGCGAATGTATCACCTCCACAATCACATCATGGTGTAGGTATTCTGTAGCTTTCGGTGGCAATGCTTTTGATTAGTACTTTTCAATTCCTAGCCTCTTCCATCTTTATTAACTCTAATTGTAAAACTTATAAAATCAAACGCCTCAATGAATATTGAATCAGTATTTTTGTCCTGACTACAGTGTTAGTGTTATTAGTTGATGATCAACATCAGTGTCTTAGTTTTGCATTTGCTACAGTCCCAATAACCATTTGGTTTTTTTTGAAAATTGTGCTTGTTTTCTCATCATTTCTCTACAATTTTCTACAATTGCTTTCATCTTTCTTAAAAAACTATTGAATTCTTAGCAAAATTTCAAAAACAAAAATAAGTTTTTGAAAAATACAGGTAAAAAGTGGATAACAAAACAAGGAAACCCCGAGGTGGAACTAGTATTTATAGGCTTAATTGTCAAAAACCAAATGGTTATTTAAACAGGGCCTACATTTTCTTGCACTTCCATTTCCCACATTAGGAAAATTCTATCATGGCATTTTCATCTCTAATCTTTGCTTATGAGTATTCCTTTAATTTTGACCAAGATGACTTGAACCTATTCTCTCTAAGAACTTTGTTGTTTAGAAGGTCCTTTTTGACCACTAGGCCAAGTCATGGTGGTTGATGTGTCAAACATATAAAATTGCATTAGTGGATTAGTGGTTTATTCAGATTTGAATTGATATAGAAAAAAAGTATTGTAGGCTGAAAACAACTGGTTTATCATTCACAATGCTTCCTCTCCTCTCTAAACTTAGAAATGTTAGCTTTTTAATGAAATACCTTGATAAGAAAGAGGGAGGAGACGTGTAAAGTGGCAAGGAACCATTCACCCTCAAAACTATGTACAAACAAACCTAACTTCTGAACAACTAATTACATGGCTTTTAAAATTTGTTAAGGTTTTGTTTTGATCATGTTAGGGTACTAATAGGGATTTAGGGATAGTAGTAGTATGATATGGGTAATTAGTTAGGGAGTTAGTTAATGTTTGAACATTCTTTTTCGGCTCGCTTCGTTGCTTCATTGGTATGTTCTCCTTCCTCTTGTGGTGTTGCTTTTCCGACTCTGTCCTCGCCGGTGATTTCTCCCTCCTCCCTTTCGGAACAAGATAAACCAAGTATAAGACACTTGGAACCTCCCTTTTGAGTATGCTAACCCAACCCCTAAAAACCACTCAACAATTGCTTACCTTTCCCTCAATCCCACTCCCTCTATTTATAACCAAAAACACTAACTAACTCCCTAACTAACTCCCACTCCCTCTTGAGTATGCATACTCAAGAGGAAGGAGAACATACCAATGAAGCAACGAAGCGAGCCGAAAAAGAATGTTCAAACACTAACTAACTCCTTAACTAATTACCCTAATGCCCCTACTAATACCATACTACTACTATCCCTAAATCTCTATTAGTACCCTAACAGATCGAAAGATACGTTTTCTTTTGCTTTGTATCGTTGCTACCTATAAATTCAAACTATTGATTCGTGAGAATCGCCGCTTAAAACTATATATTTAGCATTAAACTTATGACCTTGATGGAAGGATATGGTATTGGAACTAACCTGAATTTCGATAATTCCTTATATTTGACAAGCACAGACCAACTACTGGATTTGGAGGATTGATCCAACCTACAGAACTCAAGATACTGAAAGGGTAACAAGAATCTCACTTTTCCTGCTTGTTTCGTGAGTAGTCAAAAACATCAACCTTCTTCATAATTATTTATGCAGCAGCACTGTTTCAGTCCACTTTGGCTGGCTTTTGCCATCCTCATAGGAGGTCTCCTACTGGACATTCTTATATCCATCACCCTCGGCGTTTCGGCATTGCCCGTAAATATAATCATTGGTATGTTCATAACTTCTGTCGATCGAGCTATATCTAGTTTCGTGTTGTGCTTTTTTATGGTTATTGAAACCTTGAAGAACAGGAGTTATTGTTGTGCTTGGACTTGGAACTGTGTTTCGGCTTGCCCTGGAGTTCTTTCAGGAGTGGAATTCAACCAGAGGATCGCAAAGAGTGGAATCAAATGTCACTATTGGGTACTTTCCAGCTATATAGTAAGTCTTTGACTGTTTGTTAAAAAAACATGATAAATAAATGAAGTGAAAATATATTTTTTATTCTTGTCTTTTCCCAGATGTATTAACCTCTTGATCAAACATATTAGTAATGGATATTGTGTTCTAATTGTAAATTTGACAATAAATTAGTAAATAGTTTTAGAGAGATTGCAAGTGATCAATAATAGAATATTATGTTTTGACAACGTTTTCTTAATTGTAAATTTTATATTCGTCAAAGTCGG TGGAAGAATAAGAATTTCAACCGCAATGAACACAATAAAAAAAGACAGGATATTTCATAGGAATAATTCAAGAAAGTTCTCATTTGTCTTTTTATTTTTTATTTTTTATTTTTTTCTGTAAGTTGGAAAAAATAAATCAAAGGGGTCGGGTCTCTTTCGATGTGGGAGTGAGATTTGGCGCCTGAATTGCTAAAGCAATATCCTTGTGTTTGTTGAAAGCCATCAAATTACGTGGATCCATATACTCTTCTCATAAATACGTAATTTCCTTGCGTATATAAATTTGGTTTTTCTTTTCTTCTTCTTTGTTTTTCAGTTCATTCAGCGTCTAATCCATTTTTTTTTTATCTCACAAGACTAATCAACCAGTATTCACGACGCAATTTCAGAACCCATTTTTTCTTTGCTTTTCAATTCTCACCTAAAAAAGAGAAAAGTTGGGTTGAAAATTGAAATTGAAATTTTCTCTGTTCATTTTTTCCCATTTTCAGCTCTCTTTCTACTCTGCTTCAACTGTAGAATCTTCAATCCGTCAAATCTAAGTCTACCCAGTTGTTTGTTTGGACTGGGAGAAATTTTGATAGGTGGAGATTTGGCTTCAATTGGTTGGGTGAGAGAAATTGGAGAAAGGGATGATGCTCAGAAATGTCAGCTAAGGAATTTTGTTCAATTGATTCAAGTTTGTGGAGTTTGGAATTTGAATGACCTTTCAAAGATGACGGATTGCCATTCGAACGATCCAAAGGCCAACACCATTGCCAATCAGAACGATGAAACCGACCTTGAGAAGCAGAGGGTTGCTCAGCCATTAGCATCAGAGCCCTCTACCAGTGATGCTGATGATCATACACCATTGACAATTGTTGTTTCTAATGGGGAGCCCAAATCAATCTCTGAGGTTCCTGGGACTCCTCAAGAGGAATTATTGCCTTGTGCTGTTTCCCCCAAAAAGGAGCTCTTGTCTACAACTTCTAGTTCTGATGAGCAGTGCAGAATTTGTCAGCAAGAAAAGGAAGAAGTCTTGATAGAACTTGGATGTCATTGTCGAGGTGGTCTCGCAAAAGCTCATCGGACTTGCATAGATACTTGGTTTCGTACTAAAGGATCAAACAGATGTGAGATATGCCAGGTTGTAGCAGCGAATGTATCACCTCCACAATCACATCATGGTACCAACTACTGGATTTGGAGGATTGATCCAACCTACAGAACTCAAGATACTGAAAGGCAGCACTGTTTCAGTCCACTTTGGCTGGCTTTTGCCATCCTCATAGGAGGTCTCCTACTGGACATTCTTATATCCATCACCCTCGGCGTTTCGGCATTGCCCGTAAATATAATCATTGGAGTTATTGTTGTGCTTGGACTTGGAACTGTGTTTCGGCTTGCCCTGGAGTTCTTTCAGGAGTGGAATTCAACCAGAGGATCGCAAAGAGTGGAATCAAATGTCACTATTGGGTACTTTCCAGCTATATAGTAAGTCTTTGACTGTTTGTTAAAAAAACATGATAAATAAATGAAGTGAAAATATATTTTTTATTCTTGTCTTTTCCCAGATGTATTAACCTCTTGATCAAACATATTAGTAATGGATATTGTGTTCTAATTGTAAATTTGACAATAAATTAGTAAATAGTTTTAGAGAGATTGCAAGTGATCAATAATAGAATATTATGTTTTGACAACGTTTTCTTAATTGTAAATTTTATATTCGTCAAAGTCGG ATGACGGATTGCCATTCGAACGATCCAAAGGCCAACACCATTGCCAATCAGAACGATGAAACCGACCTTGAGAAGCAGAGGGTTGCTCAGCCATTAGCATCAGAGCCCTCTACCAGTGATGCTGATGATCATACACCATTGACAATTGTTGTTTCTAATGGGGAGCCCAAATCAATCTCTGAGGTTCCTGGGACTCCTCAAGAGGAATTATTGCCTTGTGCTGTTTCCCCCAAAAAGGAGCTCTTGTCTACAACTTCTAGTTCTGATGAGCAGTGCAGAATTTGTCAGCAAGAAAAGGAAGAAGTCTTGATAGAACTTGGATGTCATTGTCGAGGTGGTCTCGCAAAAGCTCATCGGACTTGCATAGATACTTGGTTTCGTACTAAAGGATCAAACAGATGTGAGATATGCCAGGTTGTAGCAGCGAATGTATCACCTCCACAATCACATCATGGTACCAACTACTGGATTTGGAGGATTGATCCAACCTACAGAACTCAAGATACTGAAAGGCAGCACTGTTTCAGTCCACTTTGGCTGGCTTTTGCCATCCTCATAGGAGGTCTCCTACTGGACATTCTTATATCCATCACCCTCGGCGTTTCGGCATTGCCCGTAAATATAATCATTGGAGTTATTGTTGTGCTTGGACTTGGAACTGTGTTTCGGCTTGCCCTGGAGTTCTTTCAGGAGTGGAATTCAACCAGAGGATCGCAAAGAGTGGAATCAAATGTCACTATTGGGTACTTTCCAGCTATATAG MTDCHSNDPKANTIANQNDETDLEKQRVAQPLASEPSTSDADDHTPLTIVVSNGEPKSISEVPGTPQEELLPCAVSPKKELLSTTSSSDEQCRICQQEKEEVLIELGCHCRGGLAKAHRTCIDTWFRTKGSNRCEICQVVAANVSPPQSHHGTNYWIWRIDPTYRTQDTERQHCFSPLWLAFAILIGGLLLDILISITLGVSALPVNIIIGVIVVLGLGTVFRLALEFFQEWNSTRGSQRVESNVTIGYFPAI Homology
BLAST of Tan0013750 vs. NCBI nr
Match: XP_038875308.1 (E3 ubiquitin-protein ligase MARCHF2 isoform X3 [Benincasa hispida]) HSP 1 Score: 446.0 bits (1146), Expect = 2.1e-121 Identity = 230/259 (88.80%), Postives = 237/259 (91.51%), Query Frame = 0
BLAST of Tan0013750 vs. NCBI nr
Match: XP_022995601.1 (E3 ubiquitin-protein ligase MARCH2-like isoform X1 [Cucurbita maxima]) HSP 1 Score: 441.8 bits (1135), Expect = 4.0e-120 Identity = 221/253 (87.35%), Postives = 233/253 (92.09%), Query Frame = 0
BLAST of Tan0013750 vs. NCBI nr
Match: XP_023534486.1 (E3 ubiquitin-protein ligase MARCH2-like isoform X1 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 441.0 bits (1133), Expect = 6.7e-120 Identity = 220/253 (86.96%), Postives = 234/253 (92.49%), Query Frame = 0
BLAST of Tan0013750 vs. NCBI nr
Match: XP_038875309.1 (E3 ubiquitin-protein ligase MARCHF2 isoform X4 [Benincasa hispida]) HSP 1 Score: 439.5 bits (1129), Expect = 2.0e-119 Identity = 229/259 (88.42%), Postives = 236/259 (91.12%), Query Frame = 0
BLAST of Tan0013750 vs. NCBI nr
Match: XP_022995603.1 (E3 ubiquitin-protein ligase MARCH2-like isoform X2 [Cucurbita maxima]) HSP 1 Score: 437.2 bits (1123), Expect = 9.7e-119 Identity = 220/253 (86.96%), Postives = 234/253 (92.49%), Query Frame = 0
BLAST of Tan0013750 vs. ExPASy TrEMBL
Match: A0A6J1K2D4 (E3 ubiquitin-protein ligase MARCH2-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111491089 PE=4 SV=1) HSP 1 Score: 441.8 bits (1135), Expect = 1.9e-120 Identity = 221/253 (87.35%), Postives = 233/253 (92.09%), Query Frame = 0
BLAST of Tan0013750 vs. ExPASy TrEMBL
Match: A0A6J1K8G6 (E3 ubiquitin-protein ligase MARCH2-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111491089 PE=4 SV=1) HSP 1 Score: 437.2 bits (1123), Expect = 4.7e-119 Identity = 220/253 (86.96%), Postives = 234/253 (92.49%), Query Frame = 0
BLAST of Tan0013750 vs. ExPASy TrEMBL
Match: A0A6J1H2W4 (E3 ubiquitin-protein ligase MARCH2-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111459604 PE=4 SV=1) HSP 1 Score: 436.4 bits (1121), Expect = 8.0e-119 Identity = 219/253 (86.56%), Postives = 231/253 (91.30%), Query Frame = 0
BLAST of Tan0013750 vs. ExPASy TrEMBL
Match: A0A6J1E3C4 (E3 ubiquitin-protein ligase MARCH2 isoform X2 OS=Momordica charantia OX=3673 GN=LOC111026101 PE=4 SV=1) HSP 1 Score: 433.3 bits (1113), Expect = 6.8e-118 Identity = 219/258 (84.88%), Postives = 230/258 (89.15%), Query Frame = 0
BLAST of Tan0013750 vs. ExPASy TrEMBL
Match: A0A6J1H4V9 (E3 ubiquitin-protein ligase MARCH2-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111459604 PE=4 SV=1) HSP 1 Score: 431.8 bits (1109), Expect = 2.0e-117 Identity = 218/253 (86.17%), Postives = 231/253 (91.30%), Query Frame = 0
BLAST of Tan0013750 vs. TAIR 10
Match: AT2G45530.1 (RING/U-box superfamily protein ) HSP 1 Score: 263.1 bits (671), Expect = 2.3e-70 Identity = 146/241 (60.58%), Postives = 175/241 (72.61%), Query Frame = 0
BLAST of Tan0013750 vs. TAIR 10
Match: AT2G37950.1 (RING/FYVE/PHD zinc finger superfamily protein ) HSP 1 Score: 67.8 bits (164), Expect = 1.4e-11 Identity = 32/63 (50.79%), Postives = 38/63 (60.32%), Query Frame = 0
BLAST of Tan0013750 vs. TAIR 10
Match: AT5G05830.1 (RING/FYVE/PHD zinc finger superfamily protein ) HSP 1 Score: 65.9 bits (159), Expect = 5.5e-11 Identity = 29/65 (44.62%), Postives = 38/65 (58.46%), Query Frame = 0
BLAST of Tan0013750 vs. TAIR 10
Match: AT5G59000.1 (RING/FYVE/PHD zinc finger superfamily protein ) HSP 1 Score: 60.8 bits (146), Expect = 1.8e-09 Identity = 28/67 (41.79%), Postives = 42/67 (62.69%), Query Frame = 0
BLAST of Tan0013750 vs. TAIR 10
Match: AT5G01070.2 (RING/FYVE/PHD zinc finger superfamily protein ) HSP 1 Score: 58.5 bits (140), Expect = 8.8e-09 Identity = 27/67 (40.30%), Postives = 35/67 (52.24%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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