Tan0008983 (gene) Snake gourd v1

Overview


Name	Tan0008983
Type	gene
Organism	Trichosanthes anguina (Snake gourd v1)
Description	protein ROOT PRIMORDIUM DEFECTIVE 1
Location	LG06: 8104467 .. 8105687 (+)
RNA-Seq Expression	Tan0008983
Synteny	Tan0008983

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCTTTCCACGCCCACGCTCTTCTCATATCTTCGGAGCGTCAGAATTGCTCAGTCGTCTTCCGTAAGCCCAGAAATTGTCTTCCAAATCAGACCCATTTCCAGTTTGAAGGTAATTTGGCGCAAGGATTCCAATTTGGATGAAGCCATCGAGAACGACAAGCGCTACAAGCTATGCGCCCGGGTCGTGAGGGAGGTTCTCAACGAGCCAGGGCAGGTGATTCCACTTCGGTACTTGGAAAAACGACGACAGAGATTGCGTCTCAATGTGAAAATCGAGACGTTTTTGAGTCGAAATCCGGGTTTGTTCGATACTTACTATGATAAAATCAAACCTAAATCCGAACCCGTTTTGTTTTTACGCGCGAGCGATCGACTAAGGGCGTTTCTCGAAGAGGAGAAGAGGATTACGATGGAAAACGAAGAGTTGATCGTGTTGAAATTGTTTAAGTTATTGATGATGTCGAAGGATAAAGTGCTTAGTGTCGATAAATTAGTGCATGTTAAGAGGGAATTCGGGTTTCCGAATGATTTTTTGGTGAATTTGGTGCCGAAGTACCCTGAATACTTTCAGATAGTTGGGAGTCCCGGCGAGGGAAAATCTTTTCTTCAATTGGTTTCTCGAAACCCTAACTTTGCGAAATCGGTGATTGAGAGGAGAGCCGAGGATGAATCCAGATCGACAGGCATTCGTGTTCGGCCCAATTTCAACTACAATCTTCCTCCTGGGTTCTTCTTAAGAAAGGAAATGAGGGAATGGGTTCGAGATTGGTTAGAACTAGATTACATATCGCCATACGAGGACGTGTCCCATTTGGCCCAAGCTTCGCCGGAGATGGAGAAGAGAACAGCTGGAGTTTTTCACGAGTTGCTATCACTTTCATTGTTCAAGAGGATTCCAGTGCCGATATTGGGGAAGTTTAGTGAAGAGTATCGGTTTTCAAATGCATTTTCCAGTGTGTTCACAAGGCATTCTGGGATATTCTATCTGTCGTTGAAAGGTGGGATTGAGACTGCTATGCTTCGAGAGGCATATAAGGGTGATCAGTTGATTGATTGTGATCCATTGCTTGAAATAAAAGATAAGTTTGTGGAGTTGTTGGAAGAAGGATGGAGGGAGAGAGCTGAGCACCGAAGGCAACAGGCAAAACAACTCAAGAAGGACATGGAATTCATGGCTGCAAGGGCTGAGTATGGCGATGAGTATGACCCTGCCAGGTAA

mRNA sequence

ATGCTTTCCACGCCCACGCTCTTCTCATATCTTCGGAGCGTCAGAATTGCTCAGTCGTCTTCCGTAAGCCCAGAAATTGTCTTCCAAATCAGACCCATTTCCAGTTTGAAGGTAATTTGGCGCAAGGATTCCAATTTGGATGAAGCCATCGAGAACGACAAGCGCTACAAGCTATGCGCCCGGGTCGTGAGGGAGGTTCTCAACGAGCCAGGGCAGGTGATTCCACTTCGGTACTTGGAAAAACGACGACAGAGATTGCGTCTCAATGTGAAAATCGAGACGTTTTTGAGTCGAAATCCGGGTTTGTTCGATACTTACTATGATAAAATCAAACCTAAATCCGAACCCGTTTTGTTTTTACGCGCGAGCGATCGACTAAGGGCGTTTCTCGAAGAGGAGAAGAGGATTACGATGGAAAACGAAGAGTTGATCGTGTTGAAATTGTTTAAGTTATTGATGATGTCGAAGGATAAAGTGCTTAGTGTCGATAAATTAGTGCATGTTAAGAGGGAATTCGGGTTTCCGAATGATTTTTTGGTGAATTTGGTGCCGAAGTACCCTGAATACTTTCAGATAGTTGGGAGTCCCGGCGAGGGAAAATCTTTTCTTCAATTGGTTTCTCGAAACCCTAACTTTGCGAAATCGGTGATTGAGAGGAGAGCCGAGGATGAATCCAGATCGACAGGCATTCGTGTTCGGCCCAATTTCAACTACAATCTTCCTCCTGGGTTCTTCTTAAGAAAGGAAATGAGGGAATGGGTTCGAGATTGGTTAGAACTAGATTACATATCGCCATACGAGGACGTGTCCCATTTGGCCCAAGCTTCGCCGGAGATGGAGAAGAGAACAGCTGGAGTTTTTCACGAGTTGCTATCACTTTCATTGTTCAAGAGGATTCCAGTGCCGATATTGGGGAAGTTTAGTGAAGAGTATCGGTTTTCAAATGCATTTTCCAGTGTGTTCACAAGGCATTCTGGGATATTCTATCTGTCGTTGAAAGGTGGGATTGAGACTGCTATGCTTCGAGAGGCATATAAGGGTGATCAGTTGATTGATTGTGATCCATTGCTTGAAATAAAAGATAAGTTTGTGGAGTTGTTGGAAGAAGGATGGAGGGAGAGAGCTGAGCACCGAAGGCAACAGGCAAAACAACTCAAGAAGGACATGGAATTCATGGCTGCAAGGGCTGAGTATGGCGATGAGTATGACCCTGCCAGGTAA

Coding sequence (CDS)

ATGCTTTCCACGCCCACGCTCTTCTCATATCTTCGGAGCGTCAGAATTGCTCAGTCGTCTTCCGTAAGCCCAGAAATTGTCTTCCAAATCAGACCCATTTCCAGTTTGAAGGTAATTTGGCGCAAGGATTCCAATTTGGATGAAGCCATCGAGAACGACAAGCGCTACAAGCTATGCGCCCGGGTCGTGAGGGAGGTTCTCAACGAGCCAGGGCAGGTGATTCCACTTCGGTACTTGGAAAAACGACGACAGAGATTGCGTCTCAATGTGAAAATCGAGACGTTTTTGAGTCGAAATCCGGGTTTGTTCGATACTTACTATGATAAAATCAAACCTAAATCCGAACCCGTTTTGTTTTTACGCGCGAGCGATCGACTAAGGGCGTTTCTCGAAGAGGAGAAGAGGATTACGATGGAAAACGAAGAGTTGATCGTGTTGAAATTGTTTAAGTTATTGATGATGTCGAAGGATAAAGTGCTTAGTGTCGATAAATTAGTGCATGTTAAGAGGGAATTCGGGTTTCCGAATGATTTTTTGGTGAATTTGGTGCCGAAGTACCCTGAATACTTTCAGATAGTTGGGAGTCCCGGCGAGGGAAAATCTTTTCTTCAATTGGTTTCTCGAAACCCTAACTTTGCGAAATCGGTGATTGAGAGGAGAGCCGAGGATGAATCCAGATCGACAGGCATTCGTGTTCGGCCCAATTTCAACTACAATCTTCCTCCTGGGTTCTTCTTAAGAAAGGAAATGAGGGAATGGGTTCGAGATTGGTTAGAACTAGATTACATATCGCCATACGAGGACGTGTCCCATTTGGCCCAAGCTTCGCCGGAGATGGAGAAGAGAACAGCTGGAGTTTTTCACGAGTTGCTATCACTTTCATTGTTCAAGAGGATTCCAGTGCCGATATTGGGGAAGTTTAGTGAAGAGTATCGGTTTTCAAATGCATTTTCCAGTGTGTTCACAAGGCATTCTGGGATATTCTATCTGTCGTTGAAAGGTGGGATTGAGACTGCTATGCTTCGAGAGGCATATAAGGGTGATCAGTTGATTGATTGTGATCCATTGCTTGAAATAAAAGATAAGTTTGTGGAGTTGTTGGAAGAAGGATGGAGGGAGAGAGCTGAGCACCGAAGGCAACAGGCAAAACAACTCAAGAAGGACATGGAATTCATGGCTGCAAGGGCTGAGTATGGCGATGAGTATGACCCTGCCAGGTAA

Protein sequence

MLSTPTLFSYLRSVRIAQSSSVSPEIVFQIRPISSLKVIWRKDSNLDEAIENDKRYKLCARVVREVLNEPGQVIPLRYLEKRRQRLRLNVKIETFLSRNPGLFDTYYDKIKPKSEPVLFLRASDRLRAFLEEEKRITMENEELIVLKLFKLLMMSKDKVLSVDKLVHVKREFGFPNDFLVNLVPKYPEYFQIVGSPGEGKSFLQLVSRNPNFAKSVIERRAEDESRSTGIRVRPNFNYNLPPGFFLRKEMREWVRDWLELDYISPYEDVSHLAQASPEMEKRTAGVFHELLSLSLFKRIPVPILGKFSEEYRFSNAFSSVFTRHSGIFYLSLKGGIETAMLREAYKGDQLIDCDPLLEIKDKFVELLEEGWRERAEHRRQQAKQLKKDMEFMAARAEYGDEYDPAR

Homology

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BLAST of Tan0008983 vs. ExPASy Swiss-Prot
Match: A0MFS5 (Protein WHAT'S THIS FACTOR 1 homolog, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At4g01037 PE=3 SV=1)

HSP 1 Score: 193.7 bits (491), Expect = 3.9e-48
Identity = 122/336 (36.31%), Postives = 187/336 (55.65%), Query Frame = 0


Query: 41  RKDSNLDEAIENDKRYKLCARVVREVLNEPGQVIPLRYLEKRRQRLRLNV--KIETFLSR 100
           RK+   D  ++ DK+ KL   + + ++++P +++ LR L K R+ L L    +    L +
Sbjct: 79  RKELTFDSVVQRDKKLKLVLNIRKILVSQPDRMMSLRGLGKYRRDLGLKKRRRFIALLRK 138

Query: 101 NPGLFDTYYDKIKPKSEPVLFLRASDRLRAFLEEEKRITMENEELIVLKLFKLLMMSKDK 160
            PG+F+     ++  +  + F   S+  R +L +E RI  E E+++V+KL KL+MMS DK
Sbjct: 139 YPGVFEI----VEEGAYSLRFKMTSEAERLYL-DEMRIRNELEDVLVVKLRKLVMMSIDK 198

Query: 161 VLSVDKLVHVKREFGFPNDFLVNLVPKYPEYFQIVGSPGEGKSFLQLVSRNPNFAKSVIE 220
            + ++K+ H+K + G P +F   +  +YP+YF++V +P  G + L+L   +P  A S  E
Sbjct: 199 RILLEKISHLKTDLGLPLEFRDTICQRYPQYFRVVPTP-RGPA-LELTHWDPELAVSAAE 258

Query: 221 ------RRAEDESRSTGIRVRPNFN-YNLPPGFFLRKEMREWVRDWLELDYISPYEDVSH 280
                 R  E E R+  I   P FN   LP G  L K     +  + ++ YISPY+D SH
Sbjct: 259 LSEDDNRTRESEERNLIIDRPPKFNRVKLPRGLNLSKSETRKISQFRDMQYISPYKDFSH 318

Query: 281 LAQASPEMEKRTAGVFHELLSLSLFKRIPVPILGKFSEEYRFSNAFSSVFTRHSGIFYLS 340
           L   + E EK   GV HELLSL+  KR  V  L  F EE+RFS     +  RH  +FY+S
Sbjct: 319 LRSGTLEKEKHACGVIHELLSLTTEKRTLVDHLTHFREEFRFSQQLRGMLIRHPDLFYVS 378

Query: 341 LKGGIETAMLREAYKGDQLIDCDPLLEIKDKFVELL 368
           LKG  ++  LREAY+  +LID DPL  +K+K   L+
Sbjct: 379 LKGERDSVFLREAYRNSELIDKDPLTLVKEKMRALV 407

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BLAST of Tan0008983 vs. ExPASy Swiss-Prot
Match: Q65XL5 (Protein WHAT'S THIS FACTOR 1 homolog, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=Os05g0571100 PE=2 SV=1)

HSP 1 Score: 184.1 bits (466), Expect = 3.1e-45
Identity = 123/337 (36.50%), Postives = 178/337 (52.82%), Query Frame = 0


Query: 41  RKDSNLDEAIENDKRYKLCARVVREVLNEPGQVIPLRYLEKRRQRLRLNVK--IETFLSR 100
           RK+   D  I+ DK+ KL  ++   +++ P +V+ LR L + R+ L L  K  +   L R
Sbjct: 64  RKEIPFDNVIQRDKKLKLVLKLRNILVSNPDRVMSLRDLGRFRRDLGLTRKRRLIALLKR 123

Query: 101 NPGLFDTYYDKIKPKSEPVLFLRASDRLRAFLEEEKRITMENEELIVLKLFKLLMMSKDK 160
            PG+F+   + +       L  R +        +E  +  E+E L V KL KLLMMS+DK
Sbjct: 124 FPGVFEVVEEGVYS-----LRFRLTPAAERLYLDELHLKNESEGLAVTKLRKLLMMSQDK 183

Query: 161 VLSVDKLVHVKREFGFPNDFLVNLVPKYPEYFQIVG-SPGEGKSFLQLVSRNPNFAKSVI 220
            + ++K+ H+K + G P +F   +  +YP+YF++V    G G   L+L   +P  A S  
Sbjct: 184 RILIEKIAHLKNDLGLPPEFRDTICLRYPQYFRVVQMDRGPG---LELTHWDPELAVSAA 243

Query: 221 -----ERRAEDESRSTGIRVRP-NFN-YNLPPGFFLRKEMREWVRDWLELDYISPYEDVS 280
                E RA +E     I  RP  FN   LP G  L +     V  + E+ YISPY D S
Sbjct: 244 EVAEEENRAREEQERNLIIDRPLKFNRVKLPQGLKLSRGEARRVAQFKEMPYISPYSDFS 303

Query: 281 HLAQASPEMEKRTAGVFHELLSLSLFKRIPVPILGKFSEEYRFSNAFSSVFTRHSGIFYL 340
           HL   S E EK   GV HE+LSL+L KR  V  L  F EE+RFS +   +  RH  +FY+
Sbjct: 304 HLRSGSAEKEKHACGVVHEILSLTLEKRTLVDHLTHFREEFRFSQSLRGMLIRHPDMFYV 363

Query: 341 SLKGGIETAMLREAYKGDQLIDCDPLLEIKDKFVELL 368
           SLKG  ++  LREAYK  QL++   L+ +K+K   L+
Sbjct: 364 SLKGDRDSVFLREAYKNSQLVEKSKLVLLKEKMRALV 392

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BLAST of Tan0008983 vs. ExPASy Swiss-Prot
Match: B6TTV8 (Protein WHAT'S THIS FACTOR 1, chloroplastic OS=Zea mays OX=4577 GN=WTF1 PE=1 SV=1)

HSP 1 Score: 180.6 bits (457), Expect = 3.5e-44
Identity = 123/359 (34.26%), Postives = 188/359 (52.37%), Query Frame = 0


Query: 24  PEIVFQIRP-----ISSLKVIWRKDSNLDEAIENDKRYKLCARVVREVLNEPGQVIPLRY 83
           P    ++RP     ++   V  RK++  D  I+ DK+ KL  ++   ++ +P +V+ LR 
Sbjct: 36  PPFPLRLRPRPAAVVAQAAVKRRKEAPFDTVIQRDKKLKLVLKLRNILVAQPDRVMSLRE 95

Query: 84  LEKRRQRLRLNVK--IETFLSRNPGLFDTYYDKIKPKSEPVLFLRASDRLRAFLEEEKRI 143
           L + R+ L L  K  +   L R PG+FD   + +       L  R +        +E R+
Sbjct: 96  LGRFRRDLGLTRKRRLIALLRRFPGVFDVVEEGVYS-----LRFRLTPAAERLYLDELRL 155

Query: 144 TMENEELIVLKLFKLLMMSKDKVLSVDKLVHVKREFGFPNDFLVNLVPKYPEYFQIVGSP 203
             E+E L V KL KLLMMS++K + ++K+ H+K + G P +F   +  +YP+YF++V   
Sbjct: 156 RNESEGLAVAKLRKLLMMSQEKRILIEKVAHLKHDLGLPPEFRDTVCLRYPQYFRVVRM- 215

Query: 204 GEGKSFLQLVSRNPNFAKSVIERRAEDESRSTGIRVRP-------NFN-YNLPPGFFLRK 263
            +    L+L   +P  A S  E  AE+ESR+     R         FN   LP G  L +
Sbjct: 216 -DRGPALELTHWDPELAVSAAE-LAEEESRAREAEERNLIIDRPLKFNRVRLPKGLKLTR 275

Query: 264 EMREWVRDWLELDYISPYEDVSHLAQASPEMEKRTAGVFHELLSLSLFKRIPVPILGKFS 323
                +  + E+ YISPY D SHL   S E EK   GV HE+LSL++ KR  V  L  F 
Sbjct: 276 GEARRIARFKEMPYISPYADFSHLRSGSDEKEKHACGVVHEILSLTVEKRTLVDHLTHFR 335

Query: 324 EEYRFSNAFSSVFTRHSGIFYLSLKGGIETAMLREAYKGDQLIDCDPLLEIKDKFVELL 368
           EE+RFS +   +  RH  +FY+S KG  ++  LREAYK  QL++ + L+ +K+K   L+
Sbjct: 336 EEFRFSQSLRGMIIRHPDMFYVSFKGDRDSVFLREAYKDSQLVEKNQLVLLKEKMRALV 386

[Close]

BLAST of Tan0008983 vs. ExPASy Swiss-Prot
Match: Q689D6 (Protein ROOT PRIMORDIUM DEFECTIVE 1 OS=Arabidopsis thaliana OX=3702 GN=RPD1 PE=1 SV=1)

HSP 1 Score: 150.6 bits (379), Expect = 3.8e-35
Identity = 109/404 (26.98%), Postives = 190/404 (47.03%), Query Frame = 0


Query: 19  SSSVSPEI-VFQIRPISSLKVIWRK-----DSNLDEAIENDKRYKLCARVVREVLNEPGQ 78
           ++++ P I +  ++P S    I +K     D   D  +E +K+ +   +    +L++P  
Sbjct: 19  ATTILPSINLILVKPFSQSTTIPKKQDRVRDHGYDNYMEVEKKIRKVVKFHSLILSQPNH 78

Query: 79  VIPLRYLEKRRQRLRLNVKIE---TFLSRNPGLFDTYYDKIKPKSEPVLFLRASDRLRAF 138
            I +  L+   +RL L  K      FL + P +F+ Y   +    + +L+ R + +    
Sbjct: 79  TIAISLLDTLARRLGLGFKQHEPGAFLLKFPHVFEIYEHPV----QRILYCRLTRKALDQ 138

Query: 139 LEEEKRITMENEELIVLKLFKLLMMSKDKVLSVDKLVHVKREFGFPNDFLVNLVPKYPEY 198
           +  E    ++     V +L KL+MMS    + ++ +   + EFG P DF  +++ K+P++
Sbjct: 139 IRHEHEAVLDQIPDAVTRLRKLVMMSNTGRIRLEHVRIARTEFGLPEDFEYSVILKHPQF 198

Query: 199 FQIVGSPGEGKSFLQLVSRNPNFAKSVIERRAEDESRSTGI---RVRPNFNYNLPPGFFL 258
           F+++        ++++V ++PN +   IER  E E R+ GI    VR +F  N PPGF +
Sbjct: 199 FRLIDGEETRDKYIEIVEKDPNLSICAIERVREIEYRTKGIDAEDVRFSFVVNFPPGFKI 258

Query: 259 RKEMREWVRDWLELDYISPYEDVS----HLAQASPEMEKRTAGVFHELLSLSLFKRIPVP 318
            K  R  V  W  L Y SPYED+S       +A   +EKR+    HELLSL++ K+I + 
Sbjct: 259 GKYFRIAVWKWQRLPYWSPYEDISGYDLRSMEAQNRLEKRSVACIHELLSLTVEKKITLE 318

Query: 319 ILGKFSEEYRFSNAFSSVFTRHSGIFYLSLKGG---IETAMLREAYKGDQLIDCDPLLEI 378
            +  F               +H GIFY+S +G    + T  LRE YK  +L++ + +   
Sbjct: 319 RIAHFRNVMNLPKKLKEFLLQHQGIFYISTRGNYGKLHTVFLREGYKRGELVEPNDVYLA 378

Query: 379 KDKFVELLEEGWRERAEHRRQQAKQLKKDMEFMAARAEYGDEYD 404
           + +  EL+               ++ K D E +  R    DE D
Sbjct: 379 RRRLAELV-----------LMSPRKAKVDAELVRYRDGLDDEDD 407

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BLAST of Tan0008983 vs. ExPASy Swiss-Prot
Match: Q9ZUZ6 (Protein WHAT'S THIS FACTOR 9, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=WTF9 PE=4 SV=1)

HSP 1 Score: 117.9 bits (294), Expect = 2.8e-25
Identity = 90/356 (25.28%), Postives = 167/356 (46.91%), Query Frame = 0


Query: 15  RIAQSSSVSPEIVFQIRPISSLKVIWRKDSNLD--EAIENDKRYKLCARVVREVLNEPGQ 74
           R A++ + S   + Q R    + + W++D   D  E I    + K    +   ++ EP +
Sbjct: 6   RHAKTVASSCTNLTQKRTYVDVYMKWKRDPYFDNIEHILRSSQLKSVVSLKNCIVQEPNR 65

Query: 75  VIPLRYLEKRRQRLRLNVKIETFLSRNPGLFDTYYDKIKPKSEPVLFLRASDRLRAFLEE 134
            IP+  + K+ ++  ++ KI  FL + P +F+ +   + P+   + + R +        +
Sbjct: 66  CIPISAISKKTRQFDVSTKIAHFLRKFPSIFEEF---VGPEYN-LPWFRLTPEATELDRQ 125

Query: 135 EKRITMENEELIVLKLFKLLMMSKDKVLSVDKLVHVKREFGFPNDFLVNLVPKYPEYFQI 194
           E+ +   + + +  +L KL++MSKD VL +  +  +K   G P+D+L          F+ 
Sbjct: 126 ERVVYQTSADDLRDRLKKLILMSKDNVLPLSIVQGMKWYLGLPDDYLQFPDMNLDSSFRF 185

Query: 195 VGSPGEGKSFLQLVSRNPNFAKSVIERRAEDESRSTGIRVRPNFNYNLPPGFFLRKEMRE 254
           V    +G   L +     +   SV+++ A  + R         F      G  LR ++ +
Sbjct: 186 VDME-DGVKGLAVDYNGGDKVLSVLQKNAMKKRRGEVSLEEIEFPLFPSKGCRLRVKIED 245

Query: 255 WVRDWLELDYISPYEDVSHLAQASPEMEKRTAGVFHELLSLSLFKRIPVPILGKFSEEYR 314
           W+ ++ +L Y+SPY+D S L  +S   EKR  G  HELL L +        L    + + 
Sbjct: 246 WLMEFQKLPYVSPYDDYSCLDPSSDIAEKRVVGFLHELLCLFVEHSAERKKLLCLKKHFG 305

Query: 315 FSNAFSSVFTRHSGIFYLSLKGGIETAMLREAYKGDQLIDCDPLLEIKDKFVELLE 369
                   F RH  IFYLS+K    TA+LRE Y+    ++  P+L ++ K+++L++
Sbjct: 306 LPQKVHKAFERHPQIFYLSMKNKTCTAILREPYRDKASVETHPVLGVRKKYIQLMK 356

[Close]

BLAST of Tan0008983 vs. NCBI nr
Match: XP_022992526.1 (protein WHAT'S THIS FACTOR 1 homolog [Cucurbita maxima] >XP_022992527.1 protein WHAT'S THIS FACTOR 1 homolog [Cucurbita maxima] >XP_022992528.1 protein WHAT'S THIS FACTOR 1 homolog [Cucurbita maxima] >XP_022992529.1 protein WHAT'S THIS FACTOR 1 homolog [Cucurbita maxima] >XP_022992530.1 protein WHAT'S THIS FACTOR 1 homolog [Cucurbita maxima] >XP_022992531.1 protein WHAT'S THIS FACTOR 1 homolog [Cucurbita maxima])

HSP 1 Score: 694.5 bits (1791), Expect = 5.4e-196
Identity = 352/398 (88.44%), Postives = 371/398 (93.22%), Query Frame = 0


Query: 1   MLSTP-TLFSYLRSVRIAQSSSVSPEIVFQIRPISSLKVIWRKDSNLDEAIENDKRYKLC 60
           MLSTP  LFSYLRS + AQSS V  +   QIR +SSLKVIWRKDS LDEAIENDKRYKLC
Sbjct: 1   MLSTPYALFSYLRSFKSAQSSFVRRKFFLQIRAVSSLKVIWRKDSRLDEAIENDKRYKLC 60

Query: 61  ARVVREVLNEPGQVIPLRYLEKRRQRLRLNVKIETFLSRNPGLFDTYYDKIKPKSEPVLF 120
           ARVVREVLNEPGQVIPLRYLEKRRQRLRLNV I+TF+S NPGL +TY D+IKPKSEPVLF
Sbjct: 61  ARVVREVLNEPGQVIPLRYLEKRRQRLRLNVSIKTFMSFNPGLLNTYCDRIKPKSEPVLF 120

Query: 121 LRASDRLRAFLEEEKRITMENEELIVLKLFKLLMMSKDKVLSVDKLVHVKREFGFPNDFL 180
           LR SDRLR FLEEEKRITMENE L+V KL KLLM+SKDK+LSVDKLVHVKREFGFPNDFL
Sbjct: 121 LRPSDRLRGFLEEEKRITMENEALLVSKLCKLLMISKDKLLSVDKLVHVKREFGFPNDFL 180

Query: 181 VNLVPKYPEYFQIVGSPGEGKSFLQLVSRNPNFAKSVIERRAEDESRSTGIRVRPNFNYN 240
           VNLVPKYPEYFQI+GSPG+ KSFLQLVSRNPNFAKSVIERRAEDES STGI++RPNFNYN
Sbjct: 181 VNLVPKYPEYFQIIGSPGDEKSFLQLVSRNPNFAKSVIERRAEDESISTGIQIRPNFNYN 240

Query: 241 LPPGFFLRKEMREWVRDWLELDYISPYEDVSHLAQASPEMEKRTAGVFHELLSLSLFKRI 300
           LPPGFFLRKEMREWVRDWLELDYISPYEDVSHLAQASPEMEKRT G+FHELLSLSLFKRI
Sbjct: 241 LPPGFFLRKEMREWVRDWLELDYISPYEDVSHLAQASPEMEKRTVGIFHELLSLSLFKRI 300

Query: 301 PVPILGKFSEEYRFSNAFSSVFTRHSGIFYLSLKGGIETAMLREAYKGDQLIDCDPLLEI 360
           PVPILGKFS+EYRFSNAFSSVFTRHSGIFYLSLKGGIETAMLREAYKG QLIDCDPLLEI
Sbjct: 301 PVPILGKFSDEYRFSNAFSSVFTRHSGIFYLSLKGGIETAMLREAYKGSQLIDCDPLLEI 360

Query: 361 KDKFVELLEEGWRERAEHRRQQAKQLKKDMEFMAARAE 398
           KDKFVELLEEGWRERAE RRQQAKQ++ DMEFMAARA+
Sbjct: 361 KDKFVELLEEGWRERAEQRRQQAKQVRNDMEFMAARAD 398

[Close]

BLAST of Tan0008983 vs. NCBI nr
Match: XP_022953521.1 (protein WHAT'S THIS FACTOR 1 homolog [Cucurbita moschata] >XP_022953522.1 protein WHAT'S THIS FACTOR 1 homolog [Cucurbita moschata] >XP_022953524.1 protein WHAT'S THIS FACTOR 1 homolog [Cucurbita moschata] >XP_022953525.1 protein WHAT'S THIS FACTOR 1 homolog [Cucurbita moschata] >XP_022953526.1 protein WHAT'S THIS FACTOR 1 homolog [Cucurbita moschata])

HSP 1 Score: 694.1 bits (1790), Expect = 7.1e-196
Identity = 354/398 (88.94%), Postives = 370/398 (92.96%), Query Frame = 0


Query: 1   MLSTP-TLFSYLRSVRIAQSSSVSPEIVFQIRPISSLKVIWRKDSNLDEAIENDKRYKLC 60
           MLSTP  LFSYLRS + AQS  V  + V QIR +SSLKVIWRKDS LDEAIENDKRYKLC
Sbjct: 1   MLSTPYALFSYLRSFKSAQSCFVRRKFVLQIRSVSSLKVIWRKDSRLDEAIENDKRYKLC 60

Query: 61  ARVVREVLNEPGQVIPLRYLEKRRQRLRLNVKIETFLSRNPGLFDTYYDKIKPKSEPVLF 120
           ARVVREVLNEPGQVIPLRYLEKRRQRLRLNV I+TF+S NPGL +TYYD+IKPKSEPVLF
Sbjct: 61  ARVVREVLNEPGQVIPLRYLEKRRQRLRLNVSIKTFMSFNPGLLNTYYDRIKPKSEPVLF 120

Query: 121 LRASDRLRAFLEEEKRITMENEELIVLKLFKLLMMSKDKVLSVDKLVHVKREFGFPNDFL 180
           LR SDRLR FLEEEKRITMENE LIV KL KLLM+SKDKVLSVDKLV VKREFGFPNDFL
Sbjct: 121 LRPSDRLRGFLEEEKRITMENEALIVSKLCKLLMISKDKVLSVDKLVQVKREFGFPNDFL 180

Query: 181 VNLVPKYPEYFQIVGSPGEGKSFLQLVSRNPNFAKSVIERRAEDESRSTGIRVRPNFNYN 240
           VNLVPKYPEYFQI+GSPG+ KSFLQLVSRNP+FAKSVIERRAEDES STGI +RPNFNYN
Sbjct: 181 VNLVPKYPEYFQIIGSPGDEKSFLQLVSRNPDFAKSVIERRAEDESISTGIDIRPNFNYN 240

Query: 241 LPPGFFLRKEMREWVRDWLELDYISPYEDVSHLAQASPEMEKRTAGVFHELLSLSLFKRI 300
           LPPGFFLRKEMREWVRDWLELDYISPYEDVSHLAQASPEMEKRT GVFHELLSLSLFKRI
Sbjct: 241 LPPGFFLRKEMREWVRDWLELDYISPYEDVSHLAQASPEMEKRTVGVFHELLSLSLFKRI 300

Query: 301 PVPILGKFSEEYRFSNAFSSVFTRHSGIFYLSLKGGIETAMLREAYKGDQLIDCDPLLEI 360
           PVPILGKFS+EYRFSNAFSSVFTRHSGIFYLSLKGGIETAMLREAYKG QLIDCDPLLEI
Sbjct: 301 PVPILGKFSDEYRFSNAFSSVFTRHSGIFYLSLKGGIETAMLREAYKGSQLIDCDPLLEI 360

Query: 361 KDKFVELLEEGWRERAEHRRQQAKQLKKDMEFMAARAE 398
           KDKFVELLEEGWRERAE RRQQAKQ++ DMEFMAARA+
Sbjct: 361 KDKFVELLEEGWRERAEQRRQQAKQVRNDMEFMAARAD 398

[Close]

BLAST of Tan0008983 vs. NCBI nr
Match: KAG7014426.1 (Protein ROOT PRIMORDIUM DEFECTIVE 1, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 693.7 bits (1789), Expect = 9.3e-196
Identity = 354/398 (88.94%), Postives = 369/398 (92.71%), Query Frame = 0


Query: 1   MLSTP-TLFSYLRSVRIAQSSSVSPEIVFQIRPISSLKVIWRKDSNLDEAIENDKRYKLC 60
           MLS P  LFSYLRS + AQS  V  + V QIR +SSLKVIWRKDS LDEAIENDKRYKLC
Sbjct: 1   MLSKPYALFSYLRSFKSAQSCFVRRKFVLQIRAVSSLKVIWRKDSRLDEAIENDKRYKLC 60

Query: 61  ARVVREVLNEPGQVIPLRYLEKRRQRLRLNVKIETFLSRNPGLFDTYYDKIKPKSEPVLF 120
           ARVVREVLNEPGQVIPLRYLEKRRQRLRLNV I+TF+S NPGL DTYYD+IKPKSEPVLF
Sbjct: 61  ARVVREVLNEPGQVIPLRYLEKRRQRLRLNVSIKTFMSFNPGLLDTYYDRIKPKSEPVLF 120

Query: 121 LRASDRLRAFLEEEKRITMENEELIVLKLFKLLMMSKDKVLSVDKLVHVKREFGFPNDFL 180
           LR SDRLR FLEEEKRITMENE LIV KL KLLM+SKDKVLSVDKLV VKREFGFPNDFL
Sbjct: 121 LRPSDRLRGFLEEEKRITMENEALIVSKLCKLLMISKDKVLSVDKLVQVKREFGFPNDFL 180

Query: 181 VNLVPKYPEYFQIVGSPGEGKSFLQLVSRNPNFAKSVIERRAEDESRSTGIRVRPNFNYN 240
           VNLVPKYPEYFQI+GSPG+ KSFLQLVSRNP+FAKSVIERRAEDES STGI +RPNFNYN
Sbjct: 181 VNLVPKYPEYFQIIGSPGDEKSFLQLVSRNPDFAKSVIERRAEDESISTGIDIRPNFNYN 240

Query: 241 LPPGFFLRKEMREWVRDWLELDYISPYEDVSHLAQASPEMEKRTAGVFHELLSLSLFKRI 300
           LPPGFFLRKEMREWVRDWLELDYISPYEDVSHLAQASPEMEKRT GVFHELLSLSLFKRI
Sbjct: 241 LPPGFFLRKEMREWVRDWLELDYISPYEDVSHLAQASPEMEKRTVGVFHELLSLSLFKRI 300

Query: 301 PVPILGKFSEEYRFSNAFSSVFTRHSGIFYLSLKGGIETAMLREAYKGDQLIDCDPLLEI 360
           PVPILGKFS+EYRFSNAFSSVFTRHSGIFYLSLKGGIETAMLREAYKG QLIDCDPLLEI
Sbjct: 301 PVPILGKFSDEYRFSNAFSSVFTRHSGIFYLSLKGGIETAMLREAYKGSQLIDCDPLLEI 360

Query: 361 KDKFVELLEEGWRERAEHRRQQAKQLKKDMEFMAARAE 398
           KDKFVELLEEGWRERAE RRQQAKQ++ DMEFMAARA+
Sbjct: 361 KDKFVELLEEGWRERAEQRRQQAKQVRNDMEFMAARAD 398

[Close]

BLAST of Tan0008983 vs. NCBI nr
Match: KAG6575893.1 (Protein WHAT'S THIS FACTOR 1-like, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 692.2 bits (1785), Expect = 2.7e-195
Identity = 353/398 (88.69%), Postives = 368/398 (92.46%), Query Frame = 0


Query: 1   MLSTP-TLFSYLRSVRIAQSSSVSPEIVFQIRPISSLKVIWRKDSNLDEAIENDKRYKLC 60
           MLS P  LFSYLRS + AQS  V  + V QIR +SSLKVIWRKDS LDEAIENDKRYKLC
Sbjct: 1   MLSKPYALFSYLRSFKSAQSCFVRRKFVLQIRAVSSLKVIWRKDSRLDEAIENDKRYKLC 60

Query: 61  ARVVREVLNEPGQVIPLRYLEKRRQRLRLNVKIETFLSRNPGLFDTYYDKIKPKSEPVLF 120
           ARVVREVLNEPGQVIPLRYLEKRRQRLRLNV I+TF+S NPGL DTYYD+IKPKSEPVLF
Sbjct: 61  ARVVREVLNEPGQVIPLRYLEKRRQRLRLNVSIKTFMSFNPGLLDTYYDRIKPKSEPVLF 120

Query: 121 LRASDRLRAFLEEEKRITMENEELIVLKLFKLLMMSKDKVLSVDKLVHVKREFGFPNDFL 180
           LR SDRLR FLEEEKRITMENE LIV KL KLLM+SKDKVLSVDKLV VKREFGFPNDFL
Sbjct: 121 LRPSDRLRGFLEEEKRITMENEALIVSKLCKLLMISKDKVLSVDKLVQVKREFGFPNDFL 180

Query: 181 VNLVPKYPEYFQIVGSPGEGKSFLQLVSRNPNFAKSVIERRAEDESRSTGIRVRPNFNYN 240
           VNLVPKYPEYFQI+GSPG+ KSFLQLVSRNP+FAKSVIERRAEDES STGI +RPNFNYN
Sbjct: 181 VNLVPKYPEYFQIIGSPGDEKSFLQLVSRNPDFAKSVIERRAEDESISTGIDIRPNFNYN 240

Query: 241 LPPGFFLRKEMREWVRDWLELDYISPYEDVSHLAQASPEMEKRTAGVFHELLSLSLFKRI 300
           LPPGFFLRKEMREWVRDWLELDYISPYEDVSHLAQASPEMEKRT GVFHELLSLSLFKRI
Sbjct: 241 LPPGFFLRKEMREWVRDWLELDYISPYEDVSHLAQASPEMEKRTVGVFHELLSLSLFKRI 300

Query: 301 PVPILGKFSEEYRFSNAFSSVFTRHSGIFYLSLKGGIETAMLREAYKGDQLIDCDPLLEI 360
           PVPILGKFS+EYRFSNAFSSVFTRHSGIFYLSLKGGIETAMLREAYKG QLIDCDPL EI
Sbjct: 301 PVPILGKFSDEYRFSNAFSSVFTRHSGIFYLSLKGGIETAMLREAYKGSQLIDCDPLFEI 360

Query: 361 KDKFVELLEEGWRERAEHRRQQAKQLKKDMEFMAARAE 398
           KDKFVELLEEGWRERAE RRQQAKQ++ DMEFMAARA+
Sbjct: 361 KDKFVELLEEGWRERAEQRRQQAKQVRNDMEFMAARAD 398

[Close]

BLAST of Tan0008983 vs. NCBI nr
Match: XP_022150285.1 (protein ROOT PRIMORDIUM DEFECTIVE 1 [Momordica charantia])

HSP 1 Score: 691.8 bits (1784), Expect = 3.5e-195
Identity = 351/397 (88.41%), Postives = 369/397 (92.95%), Query Frame = 0


Query: 1   MLSTP-TLFSYLRSVRIAQSSSVSPEIVFQIRPISSLKVIWRKDSNLDEAIENDKRYKLC 60
           ML TP TLFSYLRS R AQSSS+SPEI+FQIR ISSLKV+WRKD  LDEAIE+DKRYKLC
Sbjct: 1   MLFTPRTLFSYLRSFRSAQSSSISPEIIFQIRSISSLKVVWRKDPRLDEAIESDKRYKLC 60

Query: 61  ARVVREVLNEPGQVIPLRYLEKRRQRLRLNVKIETFLSRNPGLFDTYYDKIKPKSEPVLF 120
           ARVVREVLNEPGQVIPLRYLEKRR RLRLNVKIETF++RNPGLFDTYYD+IKPKSEPVLF
Sbjct: 61  ARVVREVLNEPGQVIPLRYLEKRRPRLRLNVKIETFMNRNPGLFDTYYDRIKPKSEPVLF 120

Query: 121 LRASDRLRAFLEEEKRITMENEELIVLKLFKLLMMSKDKVLSVDKLVHVKREFGFPNDFL 180
           +RASDRLR FL EE+RIT ENE LIV KL KLLM+SKDKVLSVDKLVHVKREFGFPNDFL
Sbjct: 121 IRASDRLREFLXEEERITTENEALIVSKLCKLLMISKDKVLSVDKLVHVKREFGFPNDFL 180

Query: 181 VNLVPKYPEYFQIVGSPGEGKSFLQLVSRNPNFAKSVIERRAEDESRSTGIRVRPNFNYN 240
           VNLVPKYPEYFQ+VGSPGEGKSFLQLVSRNPNF+KSVIE RA+DESR TGIRVRPNF+Y 
Sbjct: 181 VNLVPKYPEYFQLVGSPGEGKSFLQLVSRNPNFSKSVIETRADDESRLTGIRVRPNFDYK 240

Query: 241 LPPGFFLRKEMREWVRDWLELDYISPYEDVSHLAQASPEMEKRTAGVFHELLSLSLFKRI 300
           LPPGF LRKEMREWVRDWLELDYISPYEDV+HLAQASPEMEKRT  VFHELLSLSL KRI
Sbjct: 241 LPPGFILRKEMREWVRDWLELDYISPYEDVTHLAQASPEMEKRTVAVFHELLSLSLHKRI 300

Query: 301 PVPILGKFSEEYRFSNAFSSVFTRHSGIFYLSLKGGIETAMLREAYKGDQLIDCDPLLEI 360
           PVPILGKFS+EYRFSNAFSS+FTRHSGIFY+SLKGGI T MLREAYKGDQLID DPLLEI
Sbjct: 301 PVPILGKFSDEYRFSNAFSSIFTRHSGIFYMSLKGGIGTGMLREAYKGDQLIDRDPLLEI 360

Query: 361 KDKFVELLEEGWRERAEHRRQQAKQLKKDMEFMAARA 397
           KDKFVELLEEGWRERAE RRQQ KQLK DME MAARA
Sbjct: 361 KDKFVELLEEGWRERAEWRRQQTKQLKMDMELMAARA 397

[Close]

BLAST of Tan0008983 vs. ExPASy TrEMBL
Match: A0A6J1JZH3 (protein WHAT'S THIS FACTOR 1 homolog OS=Cucurbita maxima OX=3661 GN=LOC111488826 PE=4 SV=1)

HSP 1 Score: 694.5 bits (1791), Expect = 2.6e-196
Identity = 352/398 (88.44%), Postives = 371/398 (93.22%), Query Frame = 0


Query: 1   MLSTP-TLFSYLRSVRIAQSSSVSPEIVFQIRPISSLKVIWRKDSNLDEAIENDKRYKLC 60
           MLSTP  LFSYLRS + AQSS V  +   QIR +SSLKVIWRKDS LDEAIENDKRYKLC
Sbjct: 1   MLSTPYALFSYLRSFKSAQSSFVRRKFFLQIRAVSSLKVIWRKDSRLDEAIENDKRYKLC 60

Query: 61  ARVVREVLNEPGQVIPLRYLEKRRQRLRLNVKIETFLSRNPGLFDTYYDKIKPKSEPVLF 120
           ARVVREVLNEPGQVIPLRYLEKRRQRLRLNV I+TF+S NPGL +TY D+IKPKSEPVLF
Sbjct: 61  ARVVREVLNEPGQVIPLRYLEKRRQRLRLNVSIKTFMSFNPGLLNTYCDRIKPKSEPVLF 120

Query: 121 LRASDRLRAFLEEEKRITMENEELIVLKLFKLLMMSKDKVLSVDKLVHVKREFGFPNDFL 180
           LR SDRLR FLEEEKRITMENE L+V KL KLLM+SKDK+LSVDKLVHVKREFGFPNDFL
Sbjct: 121 LRPSDRLRGFLEEEKRITMENEALLVSKLCKLLMISKDKLLSVDKLVHVKREFGFPNDFL 180

Query: 181 VNLVPKYPEYFQIVGSPGEGKSFLQLVSRNPNFAKSVIERRAEDESRSTGIRVRPNFNYN 240
           VNLVPKYPEYFQI+GSPG+ KSFLQLVSRNPNFAKSVIERRAEDES STGI++RPNFNYN
Sbjct: 181 VNLVPKYPEYFQIIGSPGDEKSFLQLVSRNPNFAKSVIERRAEDESISTGIQIRPNFNYN 240

Query: 241 LPPGFFLRKEMREWVRDWLELDYISPYEDVSHLAQASPEMEKRTAGVFHELLSLSLFKRI 300
           LPPGFFLRKEMREWVRDWLELDYISPYEDVSHLAQASPEMEKRT G+FHELLSLSLFKRI
Sbjct: 241 LPPGFFLRKEMREWVRDWLELDYISPYEDVSHLAQASPEMEKRTVGIFHELLSLSLFKRI 300

Query: 301 PVPILGKFSEEYRFSNAFSSVFTRHSGIFYLSLKGGIETAMLREAYKGDQLIDCDPLLEI 360
           PVPILGKFS+EYRFSNAFSSVFTRHSGIFYLSLKGGIETAMLREAYKG QLIDCDPLLEI
Sbjct: 301 PVPILGKFSDEYRFSNAFSSVFTRHSGIFYLSLKGGIETAMLREAYKGSQLIDCDPLLEI 360

Query: 361 KDKFVELLEEGWRERAEHRRQQAKQLKKDMEFMAARAE 398
           KDKFVELLEEGWRERAE RRQQAKQ++ DMEFMAARA+
Sbjct: 361 KDKFVELLEEGWRERAEQRRQQAKQVRNDMEFMAARAD 398

[Close]

BLAST of Tan0008983 vs. ExPASy TrEMBL
Match: A0A6J1GN70 (protein WHAT'S THIS FACTOR 1 homolog OS=Cucurbita moschata OX=3662 GN=LOC111456044 PE=4 SV=1)

HSP 1 Score: 694.1 bits (1790), Expect = 3.4e-196
Identity = 354/398 (88.94%), Postives = 370/398 (92.96%), Query Frame = 0


Query: 1   MLSTP-TLFSYLRSVRIAQSSSVSPEIVFQIRPISSLKVIWRKDSNLDEAIENDKRYKLC 60
           MLSTP  LFSYLRS + AQS  V  + V QIR +SSLKVIWRKDS LDEAIENDKRYKLC
Sbjct: 1   MLSTPYALFSYLRSFKSAQSCFVRRKFVLQIRSVSSLKVIWRKDSRLDEAIENDKRYKLC 60

Query: 61  ARVVREVLNEPGQVIPLRYLEKRRQRLRLNVKIETFLSRNPGLFDTYYDKIKPKSEPVLF 120
           ARVVREVLNEPGQVIPLRYLEKRRQRLRLNV I+TF+S NPGL +TYYD+IKPKSEPVLF
Sbjct: 61  ARVVREVLNEPGQVIPLRYLEKRRQRLRLNVSIKTFMSFNPGLLNTYYDRIKPKSEPVLF 120

Query: 121 LRASDRLRAFLEEEKRITMENEELIVLKLFKLLMMSKDKVLSVDKLVHVKREFGFPNDFL 180
           LR SDRLR FLEEEKRITMENE LIV KL KLLM+SKDKVLSVDKLV VKREFGFPNDFL
Sbjct: 121 LRPSDRLRGFLEEEKRITMENEALIVSKLCKLLMISKDKVLSVDKLVQVKREFGFPNDFL 180

Query: 181 VNLVPKYPEYFQIVGSPGEGKSFLQLVSRNPNFAKSVIERRAEDESRSTGIRVRPNFNYN 240
           VNLVPKYPEYFQI+GSPG+ KSFLQLVSRNP+FAKSVIERRAEDES STGI +RPNFNYN
Sbjct: 181 VNLVPKYPEYFQIIGSPGDEKSFLQLVSRNPDFAKSVIERRAEDESISTGIDIRPNFNYN 240

Query: 241 LPPGFFLRKEMREWVRDWLELDYISPYEDVSHLAQASPEMEKRTAGVFHELLSLSLFKRI 300
           LPPGFFLRKEMREWVRDWLELDYISPYEDVSHLAQASPEMEKRT GVFHELLSLSLFKRI
Sbjct: 241 LPPGFFLRKEMREWVRDWLELDYISPYEDVSHLAQASPEMEKRTVGVFHELLSLSLFKRI 300

Query: 301 PVPILGKFSEEYRFSNAFSSVFTRHSGIFYLSLKGGIETAMLREAYKGDQLIDCDPLLEI 360
           PVPILGKFS+EYRFSNAFSSVFTRHSGIFYLSLKGGIETAMLREAYKG QLIDCDPLLEI
Sbjct: 301 PVPILGKFSDEYRFSNAFSSVFTRHSGIFYLSLKGGIETAMLREAYKGSQLIDCDPLLEI 360

Query: 361 KDKFVELLEEGWRERAEHRRQQAKQLKKDMEFMAARAE 398
           KDKFVELLEEGWRERAE RRQQAKQ++ DMEFMAARA+
Sbjct: 361 KDKFVELLEEGWRERAEQRRQQAKQVRNDMEFMAARAD 398

[Close]

BLAST of Tan0008983 vs. ExPASy TrEMBL
Match: A0A6J1D830 (protein ROOT PRIMORDIUM DEFECTIVE 1 OS=Momordica charantia OX=3673 GN=LOC111018487 PE=4 SV=1)

HSP 1 Score: 691.8 bits (1784), Expect = 1.7e-195
Identity = 351/397 (88.41%), Postives = 369/397 (92.95%), Query Frame = 0


Query: 1   MLSTP-TLFSYLRSVRIAQSSSVSPEIVFQIRPISSLKVIWRKDSNLDEAIENDKRYKLC 60
           ML TP TLFSYLRS R AQSSS+SPEI+FQIR ISSLKV+WRKD  LDEAIE+DKRYKLC
Sbjct: 1   MLFTPRTLFSYLRSFRSAQSSSISPEIIFQIRSISSLKVVWRKDPRLDEAIESDKRYKLC 60

Query: 61  ARVVREVLNEPGQVIPLRYLEKRRQRLRLNVKIETFLSRNPGLFDTYYDKIKPKSEPVLF 120
           ARVVREVLNEPGQVIPLRYLEKRR RLRLNVKIETF++RNPGLFDTYYD+IKPKSEPVLF
Sbjct: 61  ARVVREVLNEPGQVIPLRYLEKRRPRLRLNVKIETFMNRNPGLFDTYYDRIKPKSEPVLF 120

Query: 121 LRASDRLRAFLEEEKRITMENEELIVLKLFKLLMMSKDKVLSVDKLVHVKREFGFPNDFL 180
           +RASDRLR FL EE+RIT ENE LIV KL KLLM+SKDKVLSVDKLVHVKREFGFPNDFL
Sbjct: 121 IRASDRLREFLXEEERITTENEALIVSKLCKLLMISKDKVLSVDKLVHVKREFGFPNDFL 180

Query: 181 VNLVPKYPEYFQIVGSPGEGKSFLQLVSRNPNFAKSVIERRAEDESRSTGIRVRPNFNYN 240
           VNLVPKYPEYFQ+VGSPGEGKSFLQLVSRNPNF+KSVIE RA+DESR TGIRVRPNF+Y 
Sbjct: 181 VNLVPKYPEYFQLVGSPGEGKSFLQLVSRNPNFSKSVIETRADDESRLTGIRVRPNFDYK 240

Query: 241 LPPGFFLRKEMREWVRDWLELDYISPYEDVSHLAQASPEMEKRTAGVFHELLSLSLFKRI 300
           LPPGF LRKEMREWVRDWLELDYISPYEDV+HLAQASPEMEKRT  VFHELLSLSL KRI
Sbjct: 241 LPPGFILRKEMREWVRDWLELDYISPYEDVTHLAQASPEMEKRTVAVFHELLSLSLHKRI 300

Query: 301 PVPILGKFSEEYRFSNAFSSVFTRHSGIFYLSLKGGIETAMLREAYKGDQLIDCDPLLEI 360
           PVPILGKFS+EYRFSNAFSS+FTRHSGIFY+SLKGGI T MLREAYKGDQLID DPLLEI
Sbjct: 301 PVPILGKFSDEYRFSNAFSSIFTRHSGIFYMSLKGGIGTGMLREAYKGDQLIDRDPLLEI 360

Query: 361 KDKFVELLEEGWRERAEHRRQQAKQLKKDMEFMAARA 397
           KDKFVELLEEGWRERAE RRQQ KQLK DME MAARA
Sbjct: 361 KDKFVELLEEGWRERAEWRRQQTKQLKMDMELMAARA 397

[Close]

BLAST of Tan0008983 vs. ExPASy TrEMBL
Match: A0A0A0K559 (PORR domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G392430 PE=4 SV=1)

HSP 1 Score: 676.0 bits (1743), Expect = 9.7e-191
Identity = 341/397 (85.89%), Postives = 363/397 (91.44%), Query Frame = 0


Query: 1   MLSTP-TLFSYLRSVRIAQSSSVSPEIVFQIRPISSLKVIWRKDSNLDEAIENDKRYKLC 60
           M STP +L SYLR ++      +S EI+ Q RPISSLKV+WRKD  LDEAIENDKRYKLC
Sbjct: 1   MFSTPNSLISYLRGIKSHCPCFLSQEIIVQFRPISSLKVVWRKDYRLDEAIENDKRYKLC 60

Query: 61  ARVVREVLNEPGQVIPLRYLEKRRQRLRLNVKIETFLSRNPGLFDTYYDKIKPKSEPVLF 120
           ARVV+EVLNEPGQVIPLRYLEKRR+RLRLNV ++ FL  NPGLFDTYYD+IKPKSEPVLF
Sbjct: 61  ARVVKEVLNEPGQVIPLRYLEKRRERLRLNVSVKAFLGFNPGLFDTYYDRIKPKSEPVLF 120

Query: 121 LRASDRLRAFLEEEKRITMENEELIVLKLFKLLMMSKDKVLSVDKLVHVKREFGFPNDFL 180
           LRASDRLR FLEEEKRI MENEELIV KL KLLMMSKDK+LSVDKLVHVKR+FGFPNDFL
Sbjct: 121 LRASDRLRGFLEEEKRIMMENEELIVSKLCKLLMMSKDKMLSVDKLVHVKRDFGFPNDFL 180

Query: 181 VNLVPKYPEYFQIVGSPGEGKSFLQLVSRNPNFAKSVIERRAEDESRSTGIRVRPNFNYN 240
           VNLVPKYPEYFQIVG PGEGKSFLQLVSRNP+FAKSVIERRAEDES STGIR+RPNF+Y 
Sbjct: 181 VNLVPKYPEYFQIVGCPGEGKSFLQLVSRNPDFAKSVIERRAEDESISTGIRMRPNFDYK 240

Query: 241 LPPGFFLRKEMREWVRDWLELDYISPYEDVSHLAQASPEMEKRTAGVFHELLSLSLFKRI 300
           LPPGF LRKEMREWVRDWLELDYISPYEDVSHLAQ+SPEMEKRT GVFHELLSLSLFKRI
Sbjct: 241 LPPGFILRKEMREWVRDWLELDYISPYEDVSHLAQSSPEMEKRTVGVFHELLSLSLFKRI 300

Query: 301 PVPILGKFSEEYRFSNAFSSVFTRHSGIFYLSLKGGIETAMLREAYKGDQLIDCDPLLEI 360
           PVPILGKF  EYRFSNAFSSVFTRHSGIFYLSLKGGIETAMLREAY+G QLIDCDPLLEI
Sbjct: 301 PVPILGKFGGEYRFSNAFSSVFTRHSGIFYLSLKGGIETAMLREAYEGGQLIDCDPLLEI 360

Query: 361 KDKFVELLEEGWRERAEHRRQQAKQLKKDMEFMAARA 397
           K+KFVELLE+GWRERAE RRQQA +L+KDMEFM ARA
Sbjct: 361 KNKFVELLEQGWRERAEQRRQQANELRKDMEFMCARA 397

[Close]

BLAST of Tan0008983 vs. ExPASy TrEMBL
Match: A0A1S3BS57 (protein ROOT PRIMORDIUM DEFECTIVE 1 OS=Cucumis melo OX=3656 GN=LOC103492691 PE=4 SV=1)

HSP 1 Score: 674.9 bits (1740), Expect = 2.2e-190
Identity = 338/397 (85.14%), Postives = 364/397 (91.69%), Query Frame = 0


Query: 1   MLSTP-TLFSYLRSVRIAQSSSVSPEIVFQIRPISSLKVIWRKDSNLDEAIENDKRYKLC 60
           M STP +L SYLR ++    S +S EI+ Q RPISSLKV+WRKD  LDEAIENDKRYKLC
Sbjct: 1   MFSTPHSLISYLRRIKSPHPSFLSQEIIVQFRPISSLKVVWRKDYRLDEAIENDKRYKLC 60

Query: 61  ARVVREVLNEPGQVIPLRYLEKRRQRLRLNVKIETFLSRNPGLFDTYYDKIKPKSEPVLF 120
           ARVVREVLNEPGQVIPLRYLEKRR+RLRLNV ++ FL  NPGL DTYYD+IKPKSEPVLF
Sbjct: 61  ARVVREVLNEPGQVIPLRYLEKRRERLRLNVSVKAFLGFNPGLLDTYYDRIKPKSEPVLF 120

Query: 121 LRASDRLRAFLEEEKRITMENEELIVLKLFKLLMMSKDKVLSVDKLVHVKREFGFPNDFL 180
           LRASDRLR FLEEEKRI MENEELIV KL KLLMMSKDK+LSVDKL+HVKR+FGFPNDFL
Sbjct: 121 LRASDRLRGFLEEEKRIMMENEELIVSKLCKLLMMSKDKMLSVDKLLHVKRDFGFPNDFL 180

Query: 181 VNLVPKYPEYFQIVGSPGEGKSFLQLVSRNPNFAKSVIERRAEDESRSTGIRVRPNFNYN 240
           VNLVPKYPEYFQIVGSPGEGKSFLQLV+RNP+FAKSVIERRAEDESRSTGIR+RPNF+Y 
Sbjct: 181 VNLVPKYPEYFQIVGSPGEGKSFLQLVTRNPDFAKSVIERRAEDESRSTGIRMRPNFDYK 240

Query: 241 LPPGFFLRKEMREWVRDWLELDYISPYEDVSHLAQASPEMEKRTAGVFHELLSLSLFKRI 300
           LPPGF LRKEMREWVRDWLELDYISPYEDVS+L Q+SPEMEKRT GVFHELLSLSL KRI
Sbjct: 241 LPPGFILRKEMREWVRDWLELDYISPYEDVSYLEQSSPEMEKRTVGVFHELLSLSLLKRI 300

Query: 301 PVPILGKFSEEYRFSNAFSSVFTRHSGIFYLSLKGGIETAMLREAYKGDQLIDCDPLLEI 360
           PVPILGKF +EYRFSNAFSSVFTRHSGIFYLSLKGGIETAMLREAY+GDQLIDCDPLLEI
Sbjct: 301 PVPILGKFGDEYRFSNAFSSVFTRHSGIFYLSLKGGIETAMLREAYQGDQLIDCDPLLEI 360

Query: 361 KDKFVELLEEGWRERAEHRRQQAKQLKKDMEFMAARA 397
           K+KFVELLE+GWRERAE RR+QA + +KDMEFM ARA
Sbjct: 361 KNKFVELLEQGWRERAEQRREQANERRKDMEFMGARA 397

[Close]

BLAST of Tan0008983 vs. TAIR 10
Match: AT3G63090.1 (Ubiquitin carboxyl-terminal hydrolase family protein )

HSP 1 Score: 549.7 bits (1415), Expect = 2.0e-156
Identity = 273/387 (70.54%), Postives = 322/387 (83.20%), Query Frame = 0


Query: 8   FSYLRSVRIAQSSSVSPEIVFQIRPISSLKVIWRKDSNLDEAIENDKRYKLCARVVREVL 67
           +  ++S++ A+  S+      QIR ISSLKV+W+KD+ LDEAIE DKRYKLCARVV+EVL
Sbjct: 10  YEIIKSLKHAKEHSLG----IQIRWISSLKVVWKKDTRLDEAIEQDKRYKLCARVVKEVL 69

Query: 68  NEPGQVIPLRYLEKRRQRLRLNVKIETFLSRNPGLFDTYYDKIKPKSEPVLFLRASDRLR 127
           NEPGQVIPLRYLEKRR+RLRL  K ++F+  NP LF+ YYD+IKPKS+PV FLR + RLR
Sbjct: 70  NEPGQVIPLRYLEKRRERLRLTFKAKSFVEMNPSLFEIYYDRIKPKSDPVQFLRPTPRLR 129

Query: 128 AFLEEEKRITMENEELIVLKLFKLLMMSKDKVLSVDKLVHVKREFGFPNDFLVNLVPKYP 187
           AFL+EE+RI  ENE L+V KL +LLMM+KDKV+S DKLVHVKR+FGFPNDFL+ LV KYP
Sbjct: 130 AFLDEEQRIYSENEPLLVSKLCQLLMMAKDKVISADKLVHVKRDFGFPNDFLMKLVQKYP 189

Query: 188 EYFQIVGSPGEGKSFLQLVSRNPNFAKSVIERRAEDESRSTGIRVRPNFNYNLPPGFFLR 247
            YF++ G P EGKSFL+LVS NP+FAKS IE RAEDE+  TG+R+RPN+N  LP GFFLR
Sbjct: 190 NYFRLTGLPEEGKSFLELVSWNPDFAKSKIELRAEDETLKTGVRIRPNYNVKLPSGFFLR 249

Query: 248 KEMREWVRDWLELDYISPYEDVSHLAQASPEMEKRTAGVFHELLSLSLFKRIPVPILGKF 307
           KEMREW RDWLE DYISPYEDVSHL QAS EMEKRT GV HELLSLSL KR+PVP LGKF
Sbjct: 250 KEMREWTRDWLEQDYISPYEDVSHLDQASKEMEKRTVGVVHELLSLSLLKRVPVPTLGKF 309

Query: 308 SEEYRFSNAFSSVFTRHSGIFYLSLKGGIETAMLREAYKGDQLIDCDPLLEIKDKFVELL 367
            +E+RFSNAFSSVFTRHSGIFYLSLKGGI+TA+LREAYK D+L+D DPLL IKDKF+ LL
Sbjct: 310 CDEFRFSNAFSSVFTRHSGIFYLSLKGGIKTAVLREAYKDDELVDRDPLLAIKDKFLRLL 369

Query: 368 EEGWRERAEHRRQQAKQLKKDMEFMAA 395
           EEGW+ER +  + Q +Q++KD E M A
Sbjct: 370 EEGWQERKDRLKLQREQVQKDREMMLA 392

[Close]

BLAST of Tan0008983 vs. TAIR 10
Match: AT4G01037.1 (Ubiquitin carboxyl-terminal hydrolase family protein )

HSP 1 Score: 193.7 bits (491), Expect = 2.8e-49
Identity = 122/336 (36.31%), Postives = 187/336 (55.65%), Query Frame = 0


Query: 41  RKDSNLDEAIENDKRYKLCARVVREVLNEPGQVIPLRYLEKRRQRLRLNV--KIETFLSR 100
           RK+   D  ++ DK+ KL   + + ++++P +++ LR L K R+ L L    +    L +
Sbjct: 79  RKELTFDSVVQRDKKLKLVLNIRKILVSQPDRMMSLRGLGKYRRDLGLKKRRRFIALLRK 138

Query: 101 NPGLFDTYYDKIKPKSEPVLFLRASDRLRAFLEEEKRITMENEELIVLKLFKLLMMSKDK 160
            PG+F+     ++  +  + F   S+  R +L +E RI  E E+++V+KL KL+MMS DK
Sbjct: 139 YPGVFEI----VEEGAYSLRFKMTSEAERLYL-DEMRIRNELEDVLVVKLRKLVMMSIDK 198

Query: 161 VLSVDKLVHVKREFGFPNDFLVNLVPKYPEYFQIVGSPGEGKSFLQLVSRNPNFAKSVIE 220
            + ++K+ H+K + G P +F   +  +YP+YF++V +P  G + L+L   +P  A S  E
Sbjct: 199 RILLEKISHLKTDLGLPLEFRDTICQRYPQYFRVVPTP-RGPA-LELTHWDPELAVSAAE 258

Query: 221 ------RRAEDESRSTGIRVRPNFN-YNLPPGFFLRKEMREWVRDWLELDYISPYEDVSH 280
                 R  E E R+  I   P FN   LP G  L K     +  + ++ YISPY+D SH
Sbjct: 259 LSEDDNRTRESEERNLIIDRPPKFNRVKLPRGLNLSKSETRKISQFRDMQYISPYKDFSH 318

Query: 281 LAQASPEMEKRTAGVFHELLSLSLFKRIPVPILGKFSEEYRFSNAFSSVFTRHSGIFYLS 340
           L   + E EK   GV HELLSL+  KR  V  L  F EE+RFS     +  RH  +FY+S
Sbjct: 319 LRSGTLEKEKHACGVIHELLSLTTEKRTLVDHLTHFREEFRFSQQLRGMLIRHPDLFYVS 378

Query: 341 LKGGIETAMLREAYKGDQLIDCDPLLEIKDKFVELL 368
           LKG  ++  LREAY+  +LID DPL  +K+K   L+
Sbjct: 379 LKGERDSVFLREAYRNSELIDKDPLTLVKEKMRALV 407

[Close]

BLAST of Tan0008983 vs. TAIR 10
Match: AT2G31290.1 (Ubiquitin carboxyl-terminal hydrolase family protein )

HSP 1 Score: 191.8 bits (486), Expect = 1.1e-48
Identity = 118/350 (33.71%), Postives = 192/350 (54.86%), Query Frame = 0


Query: 41  RKDSNLDEAIENDKRYKLCARVVREVLNEPGQVIPLRYLEKRRQRLRLNVKIETFLSRNP 100
           +KD +L+ A+  +KR+ + +R+   +L  P QV  +++L+K+ + L L  K   +L + P
Sbjct: 29  KKDPDLESALSRNKRWIVNSRLKNIILRCPNQVASIKFLQKKFKTLDLQGKALNWLKKYP 88

Query: 101 GLFDTYYDKIKPKSEPVLFLRASDRLRAFLEEEKRITMENEELIVLKLFKLLMMSKDKVL 160
             F  Y +  +       + R +  +   +EEE+ +    E ++  +L KLLM+S ++ L
Sbjct: 89  CCFHVYLENDE------YYCRLTKPMMTLVEEEELVKDTQEPVLADRLAKLLMLSVNQRL 148

Query: 161 SVDKLVHVKREFGFPNDFLVNLVPKYPEYFQIVGSPGEGKSF-LQLVSRNPNFAKSVIER 220
           +V KL   KR FGFP+D+++ +VPKY + F++V   G   S  ++L+   P  A S +E 
Sbjct: 149 NVVKLNEFKRSFGFPDDYVIRIVPKYSDVFRLVNYSGRKSSMEIELLLWKPELAVSAVEA 208

Query: 221 RAEDESRSTGIRVRPNFNYNLPPGFFLRKEMREWVR--DWLELDYISPYEDVSHLAQASP 280
            A+           P+F+ +LP  +      + W R  ++    YISPYED   L + S 
Sbjct: 209 AAKK------CGSEPSFSCSLPSTW-----TKPWERFMEFNAFPYISPYEDHGDLVEGSK 268

Query: 281 EMEKRTAGVFHELLSLSLFKRIPVPILGKFSEEYRFSNAFSSVFTRHSGIFYLSLKGGIE 340
           E EKR+ G+ HELLSL+L+K++ +  L  F  E+      + +  +H GIFY+  K  + 
Sbjct: 269 ESEKRSVGLVHELLSLTLWKKLSIVKLSHFKREFGLPEKLNGMLLKHPGIFYVGNKYQVH 328

Query: 341 TAMLREAYKGDQLIDCDPLLEIKDKFVELLEEGWRERAEHRRQQAKQLKK 388
           T +LRE Y G +LI  DPL+ +KDKF EL+++G  E   HRR  A   KK
Sbjct: 329 TVILREGYNGSELIHKDPLVVVKDKFGELMQQGLYE-YNHRRYLANLEKK 360

[Close]

BLAST of Tan0008983 vs. TAIR 10
Match: AT2G31290.2 (Ubiquitin carboxyl-terminal hydrolase family protein )

HSP 1 Score: 191.8 bits (486), Expect = 1.1e-48
Identity = 118/350 (33.71%), Postives = 192/350 (54.86%), Query Frame = 0


Query: 41  RKDSNLDEAIENDKRYKLCARVVREVLNEPGQVIPLRYLEKRRQRLRLNVKIETFLSRNP 100
           +KD +L+ A+  +KR+ + +R+   +L  P QV  +++L+K+ + L L  K   +L + P
Sbjct: 29  KKDPDLESALSRNKRWIVNSRLKNIILRCPNQVASIKFLQKKFKTLDLQGKALNWLKKYP 88

Query: 101 GLFDTYYDKIKPKSEPVLFLRASDRLRAFLEEEKRITMENEELIVLKLFKLLMMSKDKVL 160
             F  Y +  +       + R +  +   +EEE+ +    E ++  +L KLLM+S ++ L
Sbjct: 89  CCFHVYLENDE------YYCRLTKPMMTLVEEEELVKDTQEPVLADRLAKLLMLSVNQRL 148

Query: 161 SVDKLVHVKREFGFPNDFLVNLVPKYPEYFQIVGSPGEGKSF-LQLVSRNPNFAKSVIER 220
           +V KL   KR FGFP+D+++ +VPKY + F++V   G   S  ++L+   P  A S +E 
Sbjct: 149 NVVKLNEFKRSFGFPDDYVIRIVPKYSDVFRLVNYSGRKSSMEIELLLWKPELAVSAVEA 208

Query: 221 RAEDESRSTGIRVRPNFNYNLPPGFFLRKEMREWVR--DWLELDYISPYEDVSHLAQASP 280
            A+           P+F+ +LP  +      + W R  ++    YISPYED   L + S 
Sbjct: 209 AAKK------CGSEPSFSCSLPSTW-----TKPWERFMEFNAFPYISPYEDHGDLVEGSK 268

Query: 281 EMEKRTAGVFHELLSLSLFKRIPVPILGKFSEEYRFSNAFSSVFTRHSGIFYLSLKGGIE 340
           E EKR+ G+ HELLSL+L+K++ +  L  F  E+      + +  +H GIFY+  K  + 
Sbjct: 269 ESEKRSVGLVHELLSLTLWKKLSIVKLSHFKREFGLPEKLNGMLLKHPGIFYVGNKYQVH 328

Query: 341 TAMLREAYKGDQLIDCDPLLEIKDKFVELLEEGWRERAEHRRQQAKQLKK 388
           T +LRE Y G +LI  DPL+ +KDKF EL+++G  E   HRR  A   KK
Sbjct: 329 TVILREGYNGSELIHKDPLVVVKDKFGELMQQGLYE-YNHRRYLANLEKK 360

[Close]

BLAST of Tan0008983 vs. TAIR 10
Match: AT5G48040.1 (Ubiquitin carboxyl-terminal hydrolase family protein )

HSP 1 Score: 170.6 bits (431), Expect = 2.5e-42
Identity = 110/368 (29.89%), Postives = 188/368 (51.09%), Query Frame = 0


Query: 35  SLKVIWRKDSNLDEAIENDKRYKLCARVVREVLNEPGQVIPLRYLEKRRQRLRL--NVKI 94
           ++K+ W KD  LD  +  +K  +    +V  +   P   +P+  L   R +L L   +K+
Sbjct: 34  NVKLKWVKDRELDAVVVREKHLRAVCNLVSVISASPDLRLPIFKLLPHRGQLGLPQELKL 93

Query: 95  ETFLSRNPGLF--DTYYDKIKPKSEPVLFLRASDRLRAFLEEEKRITMENEELIVLKLFK 154
             F+ R P +F    Y+D            R +  L     EE  ++  NE  ++++L K
Sbjct: 94  SAFIRRYPNIFVEHCYWDSAGTSVPCFGLTRETIDL---YYEEVDVSRVNERDVLVRLCK 153

Query: 155 LLMMSKDKVLSVDKLVHVKREFGFPNDFLVNLVPKYPEYFQIVGSPGEGKSFLQLVSRNP 214
           LLM++ ++ LS+  + H++ + G P D+  +L+ K+P+ F +V    +    L+L+  + 
Sbjct: 154 LLMLTCERTLSLHSIDHLRWDLGLPYDYRDSLITKHPDLFSLVKLSSD-LDGLKLIHWDE 213

Query: 215 NFAKSVIERRAEDESRSTGIRVRPNFNYNLPPGFFLRKEMREWVRDWLELDYISPYEDVS 274
           + A S ++ R +      G   R  F      GF L+++  EW+++W  L Y SPY D S
Sbjct: 214 HLAVSQMQLRED-----VGNDERMAFPVKFTRGFGLKRKSIEWLQEWQRLPYTSPYVDAS 273

Query: 275 HLAQASPEMEKRTAGVFHELLSLSLFKRIPVPILGKFSEEYRFSNAFSSVFTRHSGIFYL 334
           HL   +   EKR  GVFHELL L++ K+     +    + +     F+ VF RH GIFY+
Sbjct: 274 HLDPRTDLSEKRNVGVFHELLHLTIGKKTERKNVSNLRKPFALPQKFTKVFERHPGIFYI 333

Query: 335 SLKGGIETAMLREAYKGDQLIDCDPLLEIKDKFVELLEEGWRERAEHRRQQAKQLKKDME 394
           S+K   +T +LREAY    LI+  PL+E+++KF  ++ EG+ +R+  R    K ++ D+E
Sbjct: 334 SMKCDTQTVILREAYDRRHLIEKHPLVEVREKFANMMNEGFLDRS--RGLYQKSVEADLE 390

Query: 395 FMAARAEY 399
               +  Y
Sbjct: 394 KNNIKTSY 390

The following BLAST results are available for this feature:

BLAST of Tan0008983 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
A0MFS5	3.9e-48	36.31	Protein WHAT'S THIS FACTOR 1 homolog, chloroplastic OS=Arabidopsis thaliana OX=3...	[more]
Q65XL5	3.1e-45	36.50	Protein WHAT'S THIS FACTOR 1 homolog, chloroplastic OS=Oryza sativa subsp. japon...	[more]
B6TTV8	3.5e-44	34.26	Protein WHAT'S THIS FACTOR 1, chloroplastic OS=Zea mays OX=4577 GN=WTF1 PE=1 SV=...	[more]
Q689D6	3.8e-35	26.98	Protein ROOT PRIMORDIUM DEFECTIVE 1 OS=Arabidopsis thaliana OX=3702 GN=RPD1 PE=1...	[more]
Q9ZUZ6	2.8e-25	25.28	Protein WHAT'S THIS FACTOR 9, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=W...	[more]

BLAST of Tan0008983 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022992526.1	5.4e-196	88.44	protein WHAT'S THIS FACTOR 1 homolog [Cucurbita maxima] >XP_022992527.1 protein ...	[more]
XP_022953521.1	7.1e-196	88.94	protein WHAT'S THIS FACTOR 1 homolog [Cucurbita moschata] >XP_022953522.1 protei...	[more]
KAG7014426.1	9.3e-196	88.94	Protein ROOT PRIMORDIUM DEFECTIVE 1, partial [Cucurbita argyrosperma subsp. argy...	[more]
KAG6575893.1	2.7e-195	88.69	Protein WHAT'S THIS FACTOR 1-like, chloroplastic, partial [Cucurbita argyrosperm...	[more]
XP_022150285.1	3.5e-195	88.41	protein ROOT PRIMORDIUM DEFECTIVE 1 [Momordica charantia]	[more]

BLAST of Tan0008983 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1JZH3	2.6e-196	88.44	protein WHAT'S THIS FACTOR 1 homolog OS=Cucurbita maxima OX=3661 GN=LOC111488826...	[more]
A0A6J1GN70	3.4e-196	88.94	protein WHAT'S THIS FACTOR 1 homolog OS=Cucurbita moschata OX=3662 GN=LOC1114560...	[more]
A0A6J1D830	1.7e-195	88.41	protein ROOT PRIMORDIUM DEFECTIVE 1 OS=Momordica charantia OX=3673 GN=LOC1110184...	[more]
A0A0A0K559	9.7e-191	85.89	PORR domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G392430 PE=4 S...	[more]
A0A1S3BS57	2.2e-190	85.14	protein ROOT PRIMORDIUM DEFECTIVE 1 OS=Cucumis melo OX=3656 GN=LOC103492691 PE=4...	[more]

BLAST of Tan0008983 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G63090.1	2.0e-156	70.54	Ubiquitin carboxyl-terminal hydrolase family protein	[more]
AT4G01037.1	2.8e-49	36.31	Ubiquitin carboxyl-terminal hydrolase family protein	[more]
AT2G31290.1	1.1e-48	33.71	Ubiquitin carboxyl-terminal hydrolase family protein	[more]
AT2G31290.2	1.1e-48	33.71	Ubiquitin carboxyl-terminal hydrolase family protein	[more]
AT5G48040.1	2.5e-42	29.89	Ubiquitin carboxyl-terminal hydrolase family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 372..392
None	No IPR available	PANTHER	PTHR31476:SF3	UBIQUITIN CARBOXYL-TERMINAL HYDROLASE FAMILY PROTEIN	coord: 26..395
IPR021099	Plant organelle RNA recognition domain	PFAM	PF11955	PORR	coord: 42..371 e-value: 2.8E-104 score: 348.6
IPR045040	PORR family	PANTHER	PTHR31476	PROTEIN WHAT'S THIS FACTOR 1 HOMOLOG, CHLOROPLASTIC	coord: 26..395

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Tan0008983.1	Tan0008983.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0016787	hydrolase activity
molecular_function	GO:0003723	RNA binding