Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATTCAAATCTCTCTCTCTCTCTCTCTCTCTTCCCTTTCTTCTCCTCTCCTCTCTGTCTCGCAAATGGAAGGTCTAATTCCCTTTGTTTACAAAGCTATTGTTCAATACAAGAACGAAAAACAAGTACCGGCCATCCGATCTTGGCTTTGCGATTCTCCTTCCACGTCCTACATCAGACTTCCCAGTGGTGATTCCGGCCGATTTCAATTCCAATCCGACGCCTCTCCTTCTTCAAAATCACCTACCTCTTCCACCACCGCCACCCAGATTCTGGTTTCTACCGGAGTTCAATCGCCGCTCCGCCATCTCACAACTCGACGGGTTGCTGCCTAATCCGATCGCCGGAGGTGGGTTTTTATCACAAAAATGAAAAGGAAAAAAGTGTTTAATTTGTAATATTTGGATTATATTTTGTCTGATTTAAACAAAAAAAAAGAAAAAAGAATGGAGTCTTGAAGTGTACGGAAAGCCGAAAGGCACCGACGCTTGGGATATGATGTGTAAATTGTGAATATTGATGAATGTATGGAAGTTTGGTTAATTGGGTTGTTATTATTTTGTTTTGGATATTATGTTTGGGACTGGGAGTAGTTAGATGTCAAATCCAAATGAAGCCATCAACAATAATAAAGAAGAAAAGAATATATAGTAAGCAATGGGGGAGAGTTGTTGAAAAATCAAAGGGAATATTAAATTGTATATGTACATGGAAAAAAAGCGATGGGATGTGTAGCTTATAGAGTGGCCCAGCCTTTATGGGAGCTTTTGAGATATCTTTTTAGTGTAAAATGATCGAGCCAAGAGATATTTTTTGTTCTGTTTCCAATTGTAATTACCTCTAATTGGAGATCTTCATCCATCTCCCTGTTTGCATCAATGTACTGTGGTTGAAATTTCATTATCCTTGTGGGGTTCAACAATATTAAATAAACTTTTATAGAAG
mRNA sequence
ATTCAAATCTCTCTCTCTCTCTCTCTCTCTTCCCTTTCTTCTCCTCTCCTCTCTGTCTCGCAAATGGAAGGTCTAATTCCCTTTGTTTACAAAGCTATTGTTCAATACAAGAACGAAAAACAAGTACCGGCCATCCGATCTTGGCTTTGCGATTCTCCTTCCACGTCCTACATCAGACTTCCCAGTGGTGATTCCGGCCGATTTCAATTCCAATCCGACGCCTCTCCTTCTTCAAAATCACCTACCTCTTCCACCACCGCCACCCAGATTCTGGTTTCTACCGGAGTTCAATCGCCGCTCCGCCATCTCACAACTCGACGGGTTGCTGCCTAATCCGATCGCCGGAGGTGGGTTTTTATCACAAAAATGAAAAGGAAAAAAGTGTTTAATTTGTAATATTTGGATTATATTTTGTCTGATTTAAACAAAAAAAAAGAAAAAAGAATGGAGTCTTGAAGTGTACGGAAAGCCGAAAGGCACCGACGCTTGGGATATGATGTGTAAATTGTGAATATTGATGAATGTATGGAAGTTTGGTTAATTGGGTTGTTATTATTTTGTTTTGGATATTATGTTTGGGACTGGGAGTAGTTAGATGTCAAATCCAAATGAAGCCATCAACAATAATAAAGAAGAAAAGAATATATAGTAAGCAATGGGGGAGAGTTGTTGAAAAATCAAAGGGAATATTAAATTGTATATGTACATGGAAAAAAAGCGATGGGATGTGTAGCTTATAGAGTGGCCCAGCCTTTATGGGAGCTTTTGAGATATCTTTTTAGTGTAAAATGATCGAGCCAAGAGATATTTTTTGTTCTGTTTCCAATTGTAATTACCTCTAATTGGAGATCTTCATCCATCTCCCTGTTTGCATCAATGTACTGTGGTTGAAATTTCATTATCCTTGTGGGGTTCAACAATATTAAATAAACTTTTATAGAAG
Coding sequence (CDS)
ATGGAAGGTCTAATTCCCTTTGTTTACAAAGCTATTGTTCAATACAAGAACGAAAAACAAGTACCGGCCATCCGATCTTGGCTTTGCGATTCTCCTTCCACGTCCTACATCAGACTTCCCAGTGGTGATTCCGGCCGATTTCAATTCCAATCCGACGCCTCTCCTTCTTCAAAATCACCTACCTCTTCCACCACCGCCACCCAGATTCTGGTTTCTACCGGAGTTCAATCGCCGCTCCGCCATCTCACAACTCGACGGGTTGCTGCCTAA
Protein sequence
MEGLIPFVYKAIVQYKNEKQVPAIRSWLCDSPSTSYIRLPSGDSGRFQFQSDASPSSKSPTSSTTATQILVSTGVQSPLRHLTTRRVAA
Homology
BLAST of IVF0005387 vs. ExPASy TrEMBL
Match:
A0A5D3DNC7 (Legume-specific protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G001410 PE=4 SV=1)
HSP 1 Score: 173.3 bits (438), Expect = 4.5e-40
Identity = 89/89 (100.00%), Postives = 89/89 (100.00%), Query Frame = 0
Query: 1 MEGLIPFVYKAIVQYKNEKQVPAIRSWLCDSPSTSYIRLPSGDSGRFQFQSDASPSSKSP 60
MEGLIPFVYKAIVQYKNEKQVPAIRSWLCDSPSTSYIRLPSGDSGRFQFQSDASPSSKSP
Sbjct: 1 MEGLIPFVYKAIVQYKNEKQVPAIRSWLCDSPSTSYIRLPSGDSGRFQFQSDASPSSKSP 60
Query: 61 TSSTTATQILVSTGVQSPLRHLTTRRVAA 90
TSSTTATQILVSTGVQSPLRHLTTRRVAA
Sbjct: 61 TSSTTATQILVSTGVQSPLRHLTTRRVAA 89
BLAST of IVF0005387 vs. ExPASy TrEMBL
Match:
A0A0A0LD26 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G733930 PE=4 SV=1)
HSP 1 Score: 167.2 bits (422), Expect = 3.2e-38
Identity = 88/89 (98.88%), Postives = 88/89 (98.88%), Query Frame = 0
Query: 1 MEGLIPFVYKAIVQYKNEKQVPAIRSWLCDSPSTSYIRLPSGDSGRFQFQSDASPSSKSP 60
MEGLIPFVYKAIVQYKNEKQVPAIRSWLCDSPSTSYIRLPSGDSGRFQFQSDASPSSKSP
Sbjct: 1 MEGLIPFVYKAIVQYKNEKQVPAIRSWLCDSPSTSYIRLPSGDSGRFQFQSDASPSSKSP 60
Query: 61 TSSTTATQILVSTGVQSPLRHLTTRRVAA 90
TSSTT TQILVSTGVQSPLRHLTTRRVAA
Sbjct: 61 TSSTT-TQILVSTGVQSPLRHLTTRRVAA 88
BLAST of IVF0005387 vs. ExPASy TrEMBL
Match:
K7MT87 (Uncharacterized protein OS=Glycine max OX=3847 GN=GLYMA_18G187300 PE=4 SV=1)
HSP 1 Score: 110.5 bits (275), Expect = 3.6e-21
Identity = 63/95 (66.32%), Postives = 74/95 (77.89%), Query Frame = 0
Query: 1 MEGLIPFVYKAIVQYKNEKQVPAIRSWLCDSPSTSYIRLPSGDSGRFQFQ------SDAS 60
MEGLIPFVYKAI+QYK +K I SWLC+SPS SY+RLP+GDSGRFQ Q S AS
Sbjct: 1 MEGLIPFVYKAIMQYKGDKDGHPIGSWLCESPSYSYMRLPAGDSGRFQIQAPASSFSAAS 60
Query: 61 PSSKSPTSSTTATQILVSTGVQSPLRHLTTRRVAA 90
PSS +P SS +ATQI+VS+GVQSP + LT RR+AA
Sbjct: 61 PSSTNPNSS-SATQIIVSSGVQSPHQCLTHRRIAA 94
BLAST of IVF0005387 vs. ExPASy TrEMBL
Match:
A0A0B2P904 (Uncharacterized protein OS=Glycine soja OX=3848 GN=D0Y65_048924 PE=4 SV=1)
HSP 1 Score: 107.8 bits (268), Expect = 2.3e-20
Identity = 62/95 (65.26%), Postives = 73/95 (76.84%), Query Frame = 0
Query: 1 MEGLIPFVYKAIVQYKNEKQVPAIRSWLCDSPSTSYIRLPSGDSGRFQFQ------SDAS 60
MEGLIPFVYKAI+QYK +K I SWLC+SPS SY+RLP+GDSGRFQ Q S AS
Sbjct: 1 MEGLIPFVYKAIMQYKGDKDGHPIGSWLCESPSYSYMRLPAGDSGRFQIQAPASSFSAAS 60
Query: 61 PSSKSPTSSTTATQILVSTGVQSPLRHLTTRRVAA 90
PSS +P SS +ATQI+VS+GVQSP + LT R +AA
Sbjct: 61 PSSTNPNSS-SATQIIVSSGVQSPHQCLTHRPIAA 94
BLAST of IVF0005387 vs. ExPASy TrEMBL
Match:
C6SZB5 (Uncharacterized protein OS=Glycine max OX=3847 PE=2 SV=1)
HSP 1 Score: 105.1 bits (261), Expect = 1.5e-19
Identity = 61/95 (64.21%), Postives = 72/95 (75.79%), Query Frame = 0
Query: 1 MEGLIPFVYKAIVQYKNEKQVPAIRSWLCDSPSTSYIRLPSGDSGRFQFQ------SDAS 60
ME LIPFVYKAI+QYK K I SWLC+SPS SY+RLP+GDSGRFQ + S AS
Sbjct: 1 MESLIPFVYKAIMQYKGGKDGHPIGSWLCESPSYSYMRLPAGDSGRFQIRAPASSFSAAS 60
Query: 61 PSSKSPTSSTTATQILVSTGVQSPLRHLTTRRVAA 90
PSS +P SS +ATQI+VS+GVQSP + LT RR+AA
Sbjct: 61 PSSTNPNSS-SATQIIVSSGVQSPHQCLTHRRIAA 94
BLAST of IVF0005387 vs. NCBI nr
Match:
KAA0044116.1 (legume-specific protein [Cucumis melo var. makuwa] >TYK25022.1 legume-specific protein [Cucumis melo var. makuwa])
HSP 1 Score: 172 bits (436), Expect = 6.27e-54
Identity = 89/89 (100.00%), Postives = 89/89 (100.00%), Query Frame = 0
Query: 1 MEGLIPFVYKAIVQYKNEKQVPAIRSWLCDSPSTSYIRLPSGDSGRFQFQSDASPSSKSP 60
MEGLIPFVYKAIVQYKNEKQVPAIRSWLCDSPSTSYIRLPSGDSGRFQFQSDASPSSKSP
Sbjct: 1 MEGLIPFVYKAIVQYKNEKQVPAIRSWLCDSPSTSYIRLPSGDSGRFQFQSDASPSSKSP 60
Query: 61 TSSTTATQILVSTGVQSPLRHLTTRRVAA 89
TSSTTATQILVSTGVQSPLRHLTTRRVAA
Sbjct: 61 TSSTTATQILVSTGVQSPLRHLTTRRVAA 89
BLAST of IVF0005387 vs. NCBI nr
Match:
KAE8650999.1 (hypothetical protein Csa_002313 [Cucumis sativus])
HSP 1 Score: 162 bits (410), Expect = 1.51e-48
Identity = 86/87 (98.85%), Postives = 86/87 (98.85%), Query Frame = 0
Query: 3 GLIPFVYKAIVQYKNEKQVPAIRSWLCDSPSTSYIRLPSGDSGRFQFQSDASPSSKSPTS 62
GLIPFVYKAIVQYKNEKQVPAIRSWLCDSPSTSYIRLPSGDSGRFQFQSDASPSSKSPTS
Sbjct: 109 GLIPFVYKAIVQYKNEKQVPAIRSWLCDSPSTSYIRLPSGDSGRFQFQSDASPSSKSPTS 168
Query: 63 STTATQILVSTGVQSPLRHLTTRRVAA 89
STT TQILVSTGVQSPLRHLTTRRVAA
Sbjct: 169 STT-TQILVSTGVQSPLRHLTTRRVAA 194
BLAST of IVF0005387 vs. NCBI nr
Match:
KAG7017269.1 (hypothetical protein SDJN02_19132, partial [Cucurbita argyrosperma subsp. argyrosperma])
HSP 1 Score: 142 bits (358), Expect = 4.98e-42
Identity = 78/91 (85.71%), Postives = 82/91 (90.11%), Query Frame = 0
Query: 1 MEGLIPFVYKAIVQYKNEKQVPAIRSWLCDSPSTSYIRLPSGDSGRFQ--FQSDASPSSK 60
MEG+IPFVYKAIVQYKNEKQVPAIRSWLCDSPSTSYIRLPSGDSGRFQ S ASPSSK
Sbjct: 1 MEGIIPFVYKAIVQYKNEKQVPAIRSWLCDSPSTSYIRLPSGDSGRFQDGSYSAASPSSK 60
Query: 61 SPTSSTTATQILVSTGVQSPLRHLTTRRVAA 89
S +S+T TQIL+STGVQSPLRHLT RRVAA
Sbjct: 61 S--ASSTTTQILISTGVQSPLRHLTPRRVAA 89
BLAST of IVF0005387 vs. NCBI nr
Match:
KAG6580521.1 (hypothetical protein SDJN03_20523, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 140 bits (354), Expect = 2.03e-41
Identity = 77/91 (84.62%), Postives = 81/91 (89.01%), Query Frame = 0
Query: 1 MEGLIPFVYKAIVQYKNEKQVPAIRSWLCDSPSTSYIRLPSGDSGRFQ--FQSDASPSSK 60
MEG+IPFVYKAIVQYKNEKQVPAIRSWLCDSPSTSYIRLPSGDSGRFQ S ASPSSK
Sbjct: 1 MEGIIPFVYKAIVQYKNEKQVPAIRSWLCDSPSTSYIRLPSGDSGRFQDGSYSAASPSSK 60
Query: 61 SPTSSTTATQILVSTGVQSPLRHLTTRRVAA 89
S +S+T TQIL+STGVQSPLRHLT RRV A
Sbjct: 61 S--ASSTTTQILISTGVQSPLRHLTPRRVVA 89
BLAST of IVF0005387 vs. NCBI nr
Match:
KAG6596392.1 (hypothetical protein SDJN03_09572, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 127 bits (319), Expect = 4.67e-36
Identity = 69/91 (75.82%), Postives = 76/91 (83.52%), Query Frame = 0
Query: 1 MEGLIPFVYKAIVQYKNEKQVPAIRSWLCDSPSTSYIRLPSGDSGRFQFQSDASPSSKSP 60
MEGLIPFVY+AIV YKN+KQVP IRSWL DSPS SYIRLPSGDSGRF FQSD S ++ SP
Sbjct: 1 MEGLIPFVYRAIVHYKNDKQVPPIRSWLTDSPSASYIRLPSGDSGRFLFQSDGSYTATSP 60
Query: 61 TSS--TTATQILVSTGVQSPLRHLTTRRVAA 89
+ S +TATQILV+TGVQSPLR L RVAA
Sbjct: 61 SKSVSSTATQILVATGVQSPLRQLAPSRVAA 91
BLAST of IVF0005387 vs. TAIR 10
Match:
AT2G37750.1 (unknown protein; Has 21 Blast hits to 21 proteins in 7 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 21; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )
HSP 1 Score: 51.2 bits (121), Expect = 4.9e-07
Identity = 39/86 (45.35%), Postives = 46/86 (53.49%), Query Frame = 0
Query: 1 MEGLIPFVYKAIVQ--YKNEKQVPAIRSWLCDSPSTSYIRLPSGDSGRF-----QFQSDA 60
MEGLIP VYKA++Q Y NE Q S+ Y+RLP GDSGRF
Sbjct: 1 MEGLIPLVYKAVMQIRYGNESQ---------QLSSSYYVRLP-GDSGRFVRSDLDVSGPG 60
Query: 61 SPSSKSPTSSTTATQILVSTGVQSPL 80
S SS +SST+ T V GVQSP+
Sbjct: 61 SNSSNRASSSTSTTTFAVYAGVQSPV 76
BLAST of IVF0005387 vs. TAIR 10
Match:
AT5G02090.1 (unknown protein; Has 30 Blast hits to 30 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 30; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )
HSP 1 Score: 45.8 bits (107), Expect = 2.1e-05
Identity = 25/50 (50.00%), Postives = 31/50 (62.00%), Query Frame = 0
Query: 1 MEGLIPFVYKAIVQYKNEKQVPAIRSWLCDSPSTS--YIRLPSGDSGRFQ 49
MEGLIPF+YKAIV YK E ++ SPS + Y+RLP S RF+
Sbjct: 1 MEGLIPFLYKAIVMYKREGSFSSVLLSDHHSPSNAGYYMRLPGDSSSRFR 50
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| Match Name | E-value | Identity | Description | |
|---|
| A0A5D3DNC7 | 4.5e-40 | 100.00 | Legume-specific protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... | [more] |
| A0A0A0LD26 | 3.2e-38 | 98.88 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G733930 PE=4 SV=1 | [more] |
| K7MT87 | 3.6e-21 | 66.32 | Uncharacterized protein OS=Glycine max OX=3847 GN=GLYMA_18G187300 PE=4 SV=1 | [more] |
| A0A0B2P904 | 2.3e-20 | 65.26 | Uncharacterized protein OS=Glycine soja OX=3848 GN=D0Y65_048924 PE=4 SV=1 | [more] |
| C6SZB5 | 1.5e-19 | 64.21 | Uncharacterized protein OS=Glycine max OX=3847 PE=2 SV=1 | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| KAA0044116.1 | 6.27e-54 | 100.00 | legume-specific protein [Cucumis melo var. makuwa] >TYK25022.1 legume-specific p... | [more] |
| KAE8650999.1 | 1.51e-48 | 98.85 | hypothetical protein Csa_002313 [Cucumis sativus] | [more] |
| KAG7017269.1 | 4.98e-42 | 85.71 | hypothetical protein SDJN02_19132, partial [Cucurbita argyrosperma subsp. argyro... | [more] |
| KAG6580521.1 | 2.03e-41 | 84.62 | hypothetical protein SDJN03_20523, partial [Cucurbita argyrosperma subsp. sorori... | [more] |
| KAG6596392.1 | 4.67e-36 | 75.82 | hypothetical protein SDJN03_09572, partial [Cucurbita argyrosperma subsp. sorori... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| AT2G37750.1 | 4.9e-07 | 45.35 | unknown protein; Has 21 Blast hits to 21 proteins in 7 species: Archae - 0; Bact... | [more] |
| AT5G02090.1 | 2.1e-05 | 50.00 | unknown protein; Has 30 Blast hits to 30 proteins in 10 species: Archae - 0; Bac... | [more] |
