IVF0014887.1 (mRNA) Melon (IVF77) v1

Overview


Name	IVF0014887.1
Type	mRNA
Organism	Cucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	protein RETICULATA, chloroplastic-like
Location	chr04: 31444847 .. 31448722 (+)
Sequence length	1326
RNA-Seq Expression	IVF0014887.1
Synteny	IVF0014887.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGGTATTTGGAACATCGTGTTCTGTGGAATTCGGGAATGAAGTAGTTTTGGGGAAGATGATGTGGAGTAAGGGGGTGGCTTTCGGCTGTGGAAGCTTTAGAAGTGTGGTGAAGGAAGTTGGATATCCATTATCGGATCGAAAAGGTATTGGAAGGAGCATAGCTGTAAAAAGGAAAAACAAGTTCTCGGTTGTGATGAATTTTTCGCAGTCGCATTTGAATTCGGACGCTCCAGCAGCTGCTGTTAGTGTTACTCTGTCGAAGGAAGAAGAGGACGCCATTAGAGGAAAGGATTTTAGAAGTATGGAGATGTCAGAAGTGGACAAGGATAAACATGACGGAGAGTTAATTGATGGCGACGGTGGCAATGGAACTTATAATAACGGTGGAGGAGGTGGTGGTGGCGGCGGTGGTGATGGCGGGGATGACAGCAGAGGAGACAAAGAAGAAGAGGAATTTGGTCCAATTATGAAATTTGAGGAAGTGATGAAAGAGTTGGAATCACGAGGGGTGACTCTTCCTTCTGATATGTTAGAGGCAGCTAAGAGCGAGGGAATTCGCAAGTTGCTGCTGCTTAGATATTTGGAGATGCAGGTATTTAAAAAAAGAAGAAGAAGAAGAATCTGTATTACATGTTTTACCATTTCTGCTTAATAATGTCCTTGTTGATTATTGAAGGGTTTAGGCTGGCCTCTCGGCTTTTTGATGAGATCCTGCGCTTTGATTCGAAACAGGGTTCTGGCGGATCCATCATTTTTCTTCAAAGTCGGTGTGGAGGTCGATTAGCTCATCCTCTTACCATATTTCAGTATTTCTTGCAAATTTTTATCTGATAAATTCAGAGATATGAATATGACGTCAGCAAAAATAATATAAATTGAGAAAGTTGATATCTTAATTGAATGATCTGATTTAGTCTGATAGTTAAAGCTAAGGCCAAATCTTGAAGGTCCTACATAGCAAATTCTACATACCATGACTTCTGGAAGTAGAAAAAATTGGGAATTTAATTGGAAAAGCATACAGATGTTAAATGAGATAGATTAGGTTTGCATCGTTGATTGGAGATTTACATGATCGCGTTTCACAAATATGGTCGGTCCTTCTTTACTTTTTTTCTTTTTTGTCTAATATTAGTTTCGGTATAACTCTTGATGTCACACAGATTTTTAAAATTACTGATTTAATATGGGCAGTTAGTTATTGATTCTTGCTGTGCTACTTTTGCGGAAGTTCAAAAGAGAGGCAAAGATTTCTGGACAGAATTTGAGCTTTATCTTGCTGATATTTTGGTTGGCGTGGCAGTTAACTTTGCTTTGGTTGCCCTGTTGGCACCTTATGCTCGTTTTGGGCAACCATCTGTGTCGAAAGGTTTCCTTGGACGCATTCAACATGCTTGTGAAGCACTACCTAGCAGGTTCCTAAGTTATCTTATAGTATAAAATCGTTATATTGCAAATTTGGTCCCTATTGTGTTTGGAGCTAGTTAGAATTTAGTCCATAAAATCCTGTAACATTGTAGATCTCTGATGCTGAGTTGTGTTTCTTATAAATTGTTTTATTACTTTTGAAATCAATAGGTTTAGAATTTATCTTTATGTGTAGTGTTTTTGAAGCTGAACGACCAGGATGTAGATTTTCTGTACAACAAAGAATTGCCACATTTTTCTATAAGGTGAGGTTTACATATACTATTATACTATTAGCCAGATCTATTTTTATCTCTTAGCAGCTTATTTTGATGCTTTTCTTTTTAGGGACTCGTGTATGGCGTAGTAGGATTTGGATGTGGTATAATCGGTCAAGGCATTGCAAATTTAATAATGACTGCAAAAAGGTTATATCTACTCTTTACTAATGTTATTGTTATTATTTGTTACATGATGATAATTTAAGGCATTTCATAAACTACTGCTCCTTTTTCATATCAGACACATGTAGTATTATTACTTGTTGCATGATGATAATTTAAGGCATTTCATCAACTGCCGCTCCTTTTCATAACAGACACATGTATAGGTTTATGCATATATATAGTCCGTACTATGCTATTGAAGTGTTCCATACAAGGTTTGGCATAATAACTGGATGTAAGACTGATACTAGAGAGATTATTTGTATAGATTCACGAGATCTATTTAGGACCCTAGCCATACATTTTTTTCATCTACATTGGCATCACTGAGCTTTTTCCTCAAATTTCTTTTCATTTACGCAGATTTTGGCACATTTCTTTTGCATCATTGAGTGTTTTGTATTTTTATTTGACCCTTACCCTTTTCCTTTTCTATATCAGGAGCATAAAGAAATCTGAAGATGAAGTACCAGTGCCCCCTCTCTTTAAGAGCGCAGCTCTTTGGGGTATATTCTTTCAACTATATACTATCGTATTTCCCTGGGTCTGAATGTTGCTACTTTGCTTATTTCTATACCCTCACTAGATAATGGCTTTGTATGTCTACAATGATATGTTGCATGTTTATCATTTGTTTATCTTGCGTTCCACATATGTGAAGCTTGTGACAGCTACTTCTTTCAGACGCAAGAACTTATCTGATATTCTGATTTGATCACATGCACTCTTTACTTCGGTTAACATTTTCAAATTTGGATAAGATTTTATTTACTCAGCTGAGATATGAGTTCTTGATATACTGTTGGATCCGTTAGCTTGTGAAAGCTTAAGTATGGTTTCCGTATTTCACTTGACATACATACTAAACAGAGAAGTTAACCTCTCTAGCCATTGGGATTTATCCAAGTTTCTTATGGGGTCCATAATGTTCATGCCAATTCCCTTGGAGTTTTGAGATTGTTTTTCATTTAGAGTTCTCTCATTCTTGGTATTCTTCCATTTGTAAATTTGTGTTTTGTTTGTTTCCCACTAAAATTTGTTTTCTTGACCCGAACCTTTCATTCTTTGTATTTTTCTATTTGTAAAGTAGTCTTTTGTTATTTCTCACTCAAATATGTTCTCGTACACCCAAATTTGCAGGTGTTTTTCTCGCATTATCTTCAAACACGCGATACCAGATCATCAATGGACTAGAACGTGTAGTGGAATCATCTCCACTAGCAAAGAATATTCCAGCAGTTGCAATGGCTTTCACAGTTGGCATTCGATTTGGCAATAACGTGTATGCTGGAATGCAATTTATCGACTGGGCTAGATGGAGTGGAGTACAGTAAGACCATCTAAACAACAATAAGATACCATTTATGTCTCCTAGGAGCCAAGAAAATAGTTCACAGGAAAAAAAGGGTGCTGCACTCTAATCGCCTATAATCTCAATTCATGAAGACCATCCCCTCAACCCCACAGGTGTAACTTATGCTTTTGACATTTACTGTAATATCTCCGGAGAACTACTGTAAAATTAATATCTTCCAGCAATAAAAAGGTTAGCGTAATTCACGAACAGCCAACTTGGTTCATTGCATTCTTTGTTGTTAGCATGCTGACATCAAAGCTATGATCATCAAAACATCTGCTTGAAAAACTTTTGCTGCATGAATGGCTCGAGAGATTTCCACGCACACATTTTAAGATTCTAATTTCTCATATATTTTTCTTAAGAATATACTTTCAAGATGTTTGGTATGTCTCGTGTCTTGACTTATAGCACTGAGTTGTGAGGTGCAGCAACTCTCAACACAAACGCAAACCCAAGTAAAACAAACATCCCTTTCTGTGATTTATGAGGCCACCAATCAAAACGTCCAAGAATTAAATCCCAACATAGATTAGTATGTTGTTGTATTGTATCACACAAAAAGTATGTTTCTCCGAAGATATTTTTTGTGTCACAACTGTATTGATTTAACTCCTACTAATGCGAACAAAGTTTGCTAATTTTGTTGTTTTAAAGGTGA

mRNA sequence

ATGGCGGTATTTGGAACATCGTGTTCTGTGGAATTCGGGAATGAAGTAGTTTTGGGGAAGATGATGTGGAGTAAGGGGGTGGCTTTCGGCTGTGGAAGCTTTAGAAGTGTGGTGAAGGAAGTTGGATATCCATTATCGGATCGAAAAGGTATTGGAAGGAGCATAGCTGTAAAAAGGAAAAACAAGTTCTCGGTTGTGATGAATTTTTCGCAGTCGCATTTGAATTCGGACGCTCCAGCAGCTGCTGTTAGTGTTACTCTGTCGAAGGAAGAAGAGGACGCCATTAGAGGAAAGGATTTTAGAAGTATGGAGATGTCAGAAGTGGACAAGGATAAACATGACGGAGAGTTAATTGATGGCGACGGTGGCAATGGAACTTATAATAACGGTGGAGGAGGTGGTGGTGGCGGCGGTGGTGATGGCGGGGATGACAGCAGAGGAGACAAAGAAGAAGAGGAATTTGGTCCAATTATGAAATTTGAGGAAGTGATGAAAGAGTTGGAATCACGAGGGGTGACTCTTCCTTCTGATATGTTAGAGGCAGCTAAGAGCGAGGGAATTCGCAAGTTGCTGCTGCTTAGATATTTGGAGATGCAGGGTTTAGGCTGGCCTCTCGGCTTTTTGATGAGATCCTGCGCTTTGATTCGAAACAGGGTTCTGGCGGATCCATCATTTTTCTTCAAAGTCGGTGTGGAGTTAGTTATTGATTCTTGCTGTGCTACTTTTGCGGAAGTTCAAAAGAGAGGCAAAGATTTCTGGACAGAATTTGAGCTTTATCTTGCTGATATTTTGGTTGGCGTGGCAGTTAACTTTGCTTTGGTTGCCCTGTTGGCACCTTATGCTCGTTTTGGGCAACCATCTGTGTCGAAAGGTTTCCTTGGACGCATTCAACATGCTTGTGAAGCACTACCTAGCAGTGTTTTTGAAGCTGAACGACCAGGATGTAGATTTTCTGTACAACAAAGAATTGCCACATTTTTCTATAAGGGACTCGTGTATGGCGTAGTAGGATTTGGATGTGGTATAATCGGTCAAGGCATTGCAAATTTAATAATGACTGCAAAAAGGAGCATAAAGAAATCTGAAGATGAAGTACCAGTGCCCCCTCTCTTTAAGAGCGCAGCTCTTTGGGGTGTTTTTCTCGCATTATCTTCAAACACGCGATACCAGATCATCAATGGACTAGAACGTGTAGTGGAATCATCTCCACTAGCAAAGAATATTCCAGCAGTTGCAATGGCTTTCACAGTTGGCATTCGATTTGGCAATAACGTGTATGCTGGAATGCAATTTATCGACTGGGCTAGATGGAGTGGAGTACAGTGA

Coding sequence (CDS)

ATGGCGGTATTTGGAACATCGTGTTCTGTGGAATTCGGGAATGAAGTAGTTTTGGGGAAGATGATGTGGAGTAAGGGGGTGGCTTTCGGCTGTGGAAGCTTTAGAAGTGTGGTGAAGGAAGTTGGATATCCATTATCGGATCGAAAAGGTATTGGAAGGAGCATAGCTGTAAAAAGGAAAAACAAGTTCTCGGTTGTGATGAATTTTTCGCAGTCGCATTTGAATTCGGACGCTCCAGCAGCTGCTGTTAGTGTTACTCTGTCGAAGGAAGAAGAGGACGCCATTAGAGGAAAGGATTTTAGAAGTATGGAGATGTCAGAAGTGGACAAGGATAAACATGACGGAGAGTTAATTGATGGCGACGGTGGCAATGGAACTTATAATAACGGTGGAGGAGGTGGTGGTGGCGGCGGTGGTGATGGCGGGGATGACAGCAGAGGAGACAAAGAAGAAGAGGAATTTGGTCCAATTATGAAATTTGAGGAAGTGATGAAAGAGTTGGAATCACGAGGGGTGACTCTTCCTTCTGATATGTTAGAGGCAGCTAAGAGCGAGGGAATTCGCAAGTTGCTGCTGCTTAGATATTTGGAGATGCAGGGTTTAGGCTGGCCTCTCGGCTTTTTGATGAGATCCTGCGCTTTGATTCGAAACAGGGTTCTGGCGGATCCATCATTTTTCTTCAAAGTCGGTGTGGAGTTAGTTATTGATTCTTGCTGTGCTACTTTTGCGGAAGTTCAAAAGAGAGGCAAAGATTTCTGGACAGAATTTGAGCTTTATCTTGCTGATATTTTGGTTGGCGTGGCAGTTAACTTTGCTTTGGTTGCCCTGTTGGCACCTTATGCTCGTTTTGGGCAACCATCTGTGTCGAAAGGTTTCCTTGGACGCATTCAACATGCTTGTGAAGCACTACCTAGCAGTGTTTTTGAAGCTGAACGACCAGGATGTAGATTTTCTGTACAACAAAGAATTGCCACATTTTTCTATAAGGGACTCGTGTATGGCGTAGTAGGATTTGGATGTGGTATAATCGGTCAAGGCATTGCAAATTTAATAATGACTGCAAAAAGGAGCATAAAGAAATCTGAAGATGAAGTACCAGTGCCCCCTCTCTTTAAGAGCGCAGCTCTTTGGGGTGTTTTTCTCGCATTATCTTCAAACACGCGATACCAGATCATCAATGGACTAGAACGTGTAGTGGAATCATCTCCACTAGCAAAGAATATTCCAGCAGTTGCAATGGCTTTCACAGTTGGCATTCGATTTGGCAATAACGTGTATGCTGGAATGCAATTTATCGACTGGGCTAGATGGAGTGGAGTACAGTGA

Protein sequence

MAVFGTSCSVEFGNEVVLGKMMWSKGVAFGCGSFRSVVKEVGYPLSDRKGIGRSIAVKRKNKFSVVMNFSQSHLNSDAPAAAVSVTLSKEEEDAIRGKDFRSMEMSEVDKDKHDGELIDGDGGNGTYNNGGGGGGGGGGDGGDDSRGDKEEEEFGPIMKFEEVMKELESRGVTLPSDMLEAAKSEGIRKLLLLRYLEMQGLGWPLGFLMRSCALIRNRVLADPSFFFKVGVELVIDSCCATFAEVQKRGKDFWTEFELYLADILVGVAVNFALVALLAPYARFGQPSVSKGFLGRIQHACEALPSSVFEAERPGCRFSVQQRIATFFYKGLVYGVVGFGCGIIGQGIANLIMTAKRSIKKSEDEVPVPPLFKSAALWGVFLALSSNTRYQIINGLERVVESSPLAKNIPAVAMAFTVGIRFGNNVYAGMQFIDWARWSGVQ

Homology

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BLAST of IVF0014887.1 vs. ExPASy Swiss-Prot
Match: B9DFK5 (Protein RETICULATA, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=RE PE=1 SV=1)

HSP 1 Score: 492.7 bits (1267), Expect = 4.5e-138
Identity = 269/439 (61.28%), Postives = 327/439 (74.49%), Query Frame = 0


Query: 5   GTSCSVEFGNEVVLGKMMWSKGVAFGCGSFRSVVKEVGYP-LSDRKGIGRSIAVKRKNKF 64
           G + +++F + V +   + S G+      FR + K +  P L  R G GR    +R   F
Sbjct: 3   GCAMNLQFSSVVKVRNEISSFGICNRDFVFRDLAKAMKVPVLRIRGGSGR----QRSRLF 62

Query: 65  SVVMNFSQSHLNSDAPAAAVSVTLSKEEEDAIRGKD-FRSMEMSEVDKDKHDGELIDGDG 124
             V+N SQS +   +   A +  +  E +++I GKD  R++   +++    DG +  GDG
Sbjct: 63  --VVNMSQSPIEPQSGGFAATEQIKGEGDNSILGKDNVRNLGTDQLENLDIDGNV--GDG 122

Query: 125 GNGTYNNGGGGGGGGGGDGGDDSRGDKEEEEFGPIMKFEEVMKELESRGVTLPSDMLEAA 184
            NG+  NGGGGGGG GG+ GD    D EE+EFGPI+KFEEVMKE E+RG TLPSDMLEAA
Sbjct: 123 FNGSDGNGGGGGGGNGGE-GDGEGEDYEEKEFGPILKFEEVMKETEARGATLPSDMLEAA 182

Query: 185 KSEGIRKLLLLRYLEMQGLGWPLGFLMRSCALIRNRVLADPSFFFKVGVELVIDSCCATF 244
           K+ GIRK+LLLRYL++Q     LGF +RS A++RNR+LADPSF FK+G E+VIDSCCAT 
Sbjct: 183 KNYGIRKVLLLRYLDLQSSAGLLGFAIRSWAMLRNRMLADPSFLFKIGAEIVIDSCCATV 242

Query: 245 AEVQKRGKDFWTEFELYLADILVGVAVNFALVALLAPYARFGQPSVSKGFLGRIQHACEA 304
           AEVQKRGKDFW EFELY+AD+LVG  VN ALV +LAPY RFGQPS S GFLGR+  A  A
Sbjct: 243 AEVQKRGKDFWAEFELYVADLLVGTVVNIALVGMLAPYVRFGQPSASPGFLGRMVFAYNA 302

Query: 305 LPSSVFEAERPGCRFSVQQRIATFFYKGLVYGVVGFGCGIIGQGIANLIMTAKRSIKKSE 364
           LPSSVFEAERPGCRFS QQR+AT+FYKG++YG VGFGCGI+GQGIANLIMTAKR+I KSE
Sbjct: 303 LPSSVFEAERPGCRFSAQQRLATYFYKGIMYGAVGFGCGIVGQGIANLIMTAKRNINKSE 362

Query: 365 DEVPVPPLFKSAALWGVFLALSSNTRYQIINGLERVVESSPLAKNIPAVAMAFTVGIRFG 424
           + +PVPPL KSAALWGVFL++SSNTRYQIINGLERVVE+SP AK  P  AMAFTVG+R  
Sbjct: 363 ENIPVPPLIKSAALWGVFLSVSSNTRYQIINGLERVVEASPFAKKFPPAAMAFTVGVRLA 422

Query: 425 NNVYAGMQFIDWARWSGVQ 442
           NN+Y GMQF+DWAR SG Q
Sbjct: 423 NNIYGGMQFVDWARLSGCQ 432

[Close]

BLAST of IVF0014887.1 vs. ExPASy Swiss-Prot
Match: Q9FGP9 (Protein RETICULATA-RELATED 1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=RER1 PE=1 SV=1)

HSP 1 Score: 486.1 bits (1250), Expect = 4.2e-136
Identity = 251/337 (74.48%), Postives = 282/337 (83.68%), Query Frame = 0


Query: 116 ELIDGDGGNGTYNNGGGG------GGGGGGDG----GDDSRGDKEEEEFGPIMKFEEVMK 175
           EL DGDGG+   NN GGG      GGGGGGDG    G+D     EE+EFGPI+KFEEVMK
Sbjct: 97  ELDDGDGGDENGNNDGGGNGGNGDGGGGGGDGEGDDGEDEADKAEEKEFGPILKFEEVMK 156

Query: 176 ELESRGVTLPSDMLEAAKSEGIRKLLLLRYLEMQGLGWPLGFLMRSCALIRNRVLADPSF 235
           E E RG+TLP DMLEAAKS GIRKL LLRYL++QG  WPLGFLMRSCA++RNR+LADPSF
Sbjct: 157 ETERRGITLPEDMLEAAKSVGIRKLFLLRYLDLQGSVWPLGFLMRSCAMLRNRMLADPSF 216

Query: 236 FFKVGVELVIDSCCATFAEVQKRGKDFWTEFELYLADILVGVAVNFALVALLAPYARFGQ 295
            FKVG E+ IDSCCATFAEVQKRG+DFW+EFELY AD+LVG+ V+ ALV LLAPYAR G+
Sbjct: 217 LFKVGTEVAIDSCCATFAEVQKRGEDFWSEFELYAADLLVGLVVDVALVGLLAPYARIGK 276

Query: 296 PSV-SKGFLGRIQHACEALPSSVFEAERPGCRFSVQQRIATFFYKGLVYGVVGFGCGIIG 355
           PSV S G    ++ AC +LPSSVFEAERPGC+FSV QRIATFFYKGL+YG VGFGCG+IG
Sbjct: 277 PSVASTGLFKDLKRACASLPSSVFEAERPGCKFSVNQRIATFFYKGLLYGSVGFGCGLIG 336

Query: 356 QGIANLIMTAKRSIKKSEDEVPVPPLFKSAALWGVFLALSSNTRYQIINGLERVVESSPL 415
           QGIANLIMTAKRS+KKSE++VP+PPLF+SAALWGVFL LSSN RYQIINGLERVVE S  
Sbjct: 337 QGIANLIMTAKRSVKKSEEDVPIPPLFESAALWGVFLGLSSNARYQIINGLERVVEGSTA 396

Query: 416 AKNIPAVAMAFTVGIRFGNNVYAGMQFIDWARWSGVQ 442
           AK IP VAMAFTVG+RF NNVY GMQF+DWA+ SGVQ
Sbjct: 397 AKRIPVVAMAFTVGVRFANNVYGGMQFVDWAKLSGVQ 433

[Close]

BLAST of IVF0014887.1 vs. ExPASy Swiss-Prot
Match: Q94CJ5 (Protein RETICULATA-RELATED 4, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=RER4 PE=2 SV=1)

HSP 1 Score: 129.0 bits (323), Expect = 1.3e-28
Identity = 101/340 (29.71%), Postives = 171/340 (50.29%), Query Frame = 0


Query: 117 LIDGDGGNGTYNNGGGG--GGGGGGDGG---DDSRGDKEEEEFGPIMKFEEVMKELESRG 176
           ++    GNG  +N GGG  GGGGGGDGG    D  GD++ +         E M  L+  G
Sbjct: 59  VLSASSGNGGSDNNGGGLSGGGGGGDGGKNDGDGHGDEDRDR-----NRNEAMLLLKESG 118

Query: 177 V---TLPSDMLEAAKSEGIRKLLLLRYLEMQG---LGWPLGFLMRSCALIRNRVLADPSF 236
           +   +LP D+  A ++  I   ++ R+LE+Q    + W + F        R R+LAD  F
Sbjct: 119 IELESLPKDLAAAIEAGRIPGSVITRFLELQKSAVMRWLMQF-----GGFRERLLADDLF 178

Query: 237 FFKVGVELVIDSCCATFAEVQKRGKDFWTEFELYLADILVGVAVNFALVALLAPYARFGQ 296
             K+ +E  +     T AE ++R ++F+ E E+  AD+ + +  +F LV L AP      
Sbjct: 179 MAKLAMECGVGIFTKTAAEYERRRENFFNELEVVFADVAMAIIADFMLVYLPAPTVSLRP 238

Query: 297 P-SVSKGFLGRIQHACEALPSSVFEAERPGCRFSVQQRIATFFYKGLVYGVVGFGCGIIG 356
           P +++ G + +  H C   P + F+    G  +++ QR+      G     VG    ++G
Sbjct: 239 PLALTAGGISKFFHNC---PDNAFQVALSGTSYTLLQRLGAITRNGAKLFAVGTTSSLVG 298

Query: 357 QGIANLIMTAKRSI-KKSEDEVPVPPLFKSAALWGVFLALSSNTRYQIINGL--ERVVES 416
             I N  + A++++ + SE EV   P+  ++  +GV++A+SSN RYQI+ G+  +R++E 
Sbjct: 299 TAITNAFIKARKAVDQNSEGEVETVPIVSTSVAYGVYMAVSSNLRYQIVAGVIEQRLLE- 358

Query: 417 SPLAKNIPAVAMAFTVGIRFGNNVYAGMQFIDWARWSGVQ 442
            P+         A    +R GN     + ++D+AR  G+Q
Sbjct: 359 -PMLHQHKLALSALCFAVRTGNTFLGSLLWVDYARLIGIQ 383

[Close]

BLAST of IVF0014887.1 vs. ExPASy Swiss-Prot
Match: Q9C9Z3 (Protein RETICULATA-RELATED 2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=RER2 PE=2 SV=1)

HSP 1 Score: 104.0 bits (258), Expect = 4.5e-21
Identity = 93/324 (28.70%), Postives = 136/324 (41.98%), Query Frame = 0


Query: 120 GDGGNGTYNNGGGGGGGGGGDGGDDSRGDKEEEEFGPIMKFEEVMKELESRGVTLPSDML 179
           G GG G+  N GGG G GGG GG     ++E   +GP+  F +                 
Sbjct: 61  GGGGGGSIGNHGGGSGSGGGGGGYGGSEEEESSPWGPLGLFIQ----------------- 120

Query: 180 EAAKSEGIRKLLLLRYLEMQGLGWPLGFLMRSCALIRNRVLADPSFFFKVGVELVIDSCC 239
                                 GW            R+RV AD  F FKV +E+++    
Sbjct: 121 ----------------------GW------------RSRVAADSQFPFKVLMEMLVGVSA 180

Query: 240 ATFAEVQKRGKDFWTEFELYLADILVGVAVNFALVALLAPYARFGQPSVSKGFLGRIQHA 299
               ++  R      E +   + ++VG  +NF L+ LLAP A      +S G    +   
Sbjct: 181 NVLGDMASRPNFGLNELDFVFSTLVVGSILNFTLMYLLAPSA------ISHGSSNLLPGI 240

Query: 300 CEALPSS-VFEAERPGCRFSVQQRIATFFYKGLVYGVVGFGCGIIGQGIAN-LIMTAKRS 359
             + PSS +FE       F++  R  T  YKG+V+  VG   G++G  I+N LIM  K+ 
Sbjct: 241 FRSCPSSHMFEQG----NFTLMNRFGTLVYKGMVFATVGLAAGLVGTAISNGLIMLRKKI 300

Query: 360 IKKSEDEVPVPPLFKSAALWGVFLALSSNTRYQIINGLERVVESSPLAKNIPAVAMAFTV 419
               E     PP   ++  W   + +S+N RYQ +NG E ++E S      P V     +
Sbjct: 301 DPSFETPNKPPPTLLNSLTWATHMGVSANVRYQTLNGAEFLLEKS----LPPLVFKTSVI 319

Query: 420 GIRFGNNVYAGMQFIDWARWSGVQ 442
            +R  NNV  GM F+  AR +G Q
Sbjct: 361 ALRVVNNVLGGMSFVTLARMTGSQ 319

[Close]

BLAST of IVF0014887.1 vs. ExPASy Swiss-Prot
Match: Q9C9Z2 (Protein RETICULATA-RELATED 3, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=RER3 PE=1 SV=1)

HSP 1 Score: 102.8 bits (255), Expect = 9.9e-21
Identity = 99/327 (30.28%), Postives = 138/327 (42.20%), Query Frame = 0


Query: 120 GDGGNGTYNNGG--GGGGGGGGDGGDDSRGDKEEEEFGPIMKFEEVMKELESRGVTLPSD 179
           G GG  T NNGG  G GGGGGG GG      +E   +GPI  F +               
Sbjct: 62  GGGGGSTGNNGGGSGSGGGGGGFGGSGGEASEESSPWGPIGLFIQ--------------- 121

Query: 180 MLEAAKSEGIRKLLLLRYLEMQGLGWPLGFLMRSCALIRNRVLADPSFFFKVGVELVIDS 239
                                   GW            R+RV ADP F FKV +E ++  
Sbjct: 122 ------------------------GW------------RSRVAADPQFPFKVLMEEIVGL 181

Query: 240 CCATFAEVQKRGKDFWTEFELYLADILVGVAVNFALVALLAP-YARFGQPSVSKGFLGRI 299
                 ++  R      E +   + ++VG  +NF L+ +LAP  A  G      G    I
Sbjct: 182 SACVLGDMASRPNFGLNELDFVFSTLVVGSILNFVLMYMLAPTAATLGSSQTLPG----I 241

Query: 300 QHACEALPSSVFEAERPGCRFSVQQRIATFFYKGLVYGVVGFGCGIIGQGIAN-LIMTAK 359
              C +  S +FE       F+V  R  T  YKG+V+  VG   G++G  I+N LIM  K
Sbjct: 242 FRNCPS--SHMFEQG----SFTVMNRFGTLVYKGMVFASVGLAAGLVGTAISNGLIMLRK 301

Query: 360 RSIKKSEDEVPVPPLFKSAALWGVFLALSSNTRYQIINGLERVVESSPLAKNIPAVAMAF 419
           +     E     PP   ++  W   + +S+N RYQ +NG+E +     LAK +P +    
Sbjct: 302 KMDPSFETPNKPPPTVLNSLTWATHMGVSANARYQTLNGIEFL-----LAKVLPPLVFKT 322

Query: 420 TV-GIRFGNNVYAGMQFIDWARWSGVQ 442
           +V  +R  NNV  GM F+  AR +G Q
Sbjct: 362 SVIVLRCANNVAGGMSFVLLARMTGSQ 322

[Close]

BLAST of IVF0014887.1 vs. ExPASy TrEMBL
Match: A0A5A7TKU7 (Protein RETICULATA OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G001340 PE=3 SV=1)

HSP 1 Score: 860.5 bits (2222), Expect = 3.0e-246
Identity = 441/441 (100.00%), Postives = 441/441 (100.00%), Query Frame = 0


Query: 1   MAVFGTSCSVEFGNEVVLGKMMWSKGVAFGCGSFRSVVKEVGYPLSDRKGIGRSIAVKRK 60
           MAVFGTSCSVEFGNEVVLGKMMWSKGVAFGCGSFRSVVKEVGYPLSDRKGIGRSIAVKRK
Sbjct: 1   MAVFGTSCSVEFGNEVVLGKMMWSKGVAFGCGSFRSVVKEVGYPLSDRKGIGRSIAVKRK 60

Query: 61  NKFSVVMNFSQSHLNSDAPAAAVSVTLSKEEEDAIRGKDFRSMEMSEVDKDKHDGELIDG 120
           NKFSVVMNFSQSHLNSDAPAAAVSVTLSKEEEDAIRGKDFRSMEMSEVDKDKHDGELIDG
Sbjct: 61  NKFSVVMNFSQSHLNSDAPAAAVSVTLSKEEEDAIRGKDFRSMEMSEVDKDKHDGELIDG 120

Query: 121 DGGNGTYNNGGGGGGGGGGDGGDDSRGDKEEEEFGPIMKFEEVMKELESRGVTLPSDMLE 180
           DGGNGTYNNGGGGGGGGGGDGGDDSRGDKEEEEFGPIMKFEEVMKELESRGVTLPSDMLE
Sbjct: 121 DGGNGTYNNGGGGGGGGGGDGGDDSRGDKEEEEFGPIMKFEEVMKELESRGVTLPSDMLE 180

Query: 181 AAKSEGIRKLLLLRYLEMQGLGWPLGFLMRSCALIRNRVLADPSFFFKVGVELVIDSCCA 240
           AAKSEGIRKLLLLRYLEMQGLGWPLGFLMRSCALIRNRVLADPSFFFKVGVELVIDSCCA
Sbjct: 181 AAKSEGIRKLLLLRYLEMQGLGWPLGFLMRSCALIRNRVLADPSFFFKVGVELVIDSCCA 240

Query: 241 TFAEVQKRGKDFWTEFELYLADILVGVAVNFALVALLAPYARFGQPSVSKGFLGRIQHAC 300
           TFAEVQKRGKDFWTEFELYLADILVGVAVNFALVALLAPYARFGQPSVSKGFLGRIQHAC
Sbjct: 241 TFAEVQKRGKDFWTEFELYLADILVGVAVNFALVALLAPYARFGQPSVSKGFLGRIQHAC 300

Query: 301 EALPSSVFEAERPGCRFSVQQRIATFFYKGLVYGVVGFGCGIIGQGIANLIMTAKRSIKK 360
           EALPSSVFEAERPGCRFSVQQRIATFFYKGLVYGVVGFGCGIIGQGIANLIMTAKRSIKK
Sbjct: 301 EALPSSVFEAERPGCRFSVQQRIATFFYKGLVYGVVGFGCGIIGQGIANLIMTAKRSIKK 360

Query: 361 SEDEVPVPPLFKSAALWGVFLALSSNTRYQIINGLERVVESSPLAKNIPAVAMAFTVGIR 420
           SEDEVPVPPLFKSAALWGVFLALSSNTRYQIINGLERVVESSPLAKNIPAVAMAFTVGIR
Sbjct: 361 SEDEVPVPPLFKSAALWGVFLALSSNTRYQIINGLERVVESSPLAKNIPAVAMAFTVGIR 420

Query: 421 FGNNVYAGMQFIDWARWSGVQ 442
           FGNNVYAGMQFIDWARWSGVQ
Sbjct: 421 FGNNVYAGMQFIDWARWSGVQ 441

[Close]

BLAST of IVF0014887.1 vs. ExPASy TrEMBL
Match: A0A1S3B6H2 (protein RETICULATA, chloroplastic-like OS=Cucumis melo OX=3656 GN=LOC103486354 PE=3 SV=1)

HSP 1 Score: 860.5 bits (2222), Expect = 3.0e-246
Identity = 441/441 (100.00%), Postives = 441/441 (100.00%), Query Frame = 0


Query: 1   MAVFGTSCSVEFGNEVVLGKMMWSKGVAFGCGSFRSVVKEVGYPLSDRKGIGRSIAVKRK 60
           MAVFGTSCSVEFGNEVVLGKMMWSKGVAFGCGSFRSVVKEVGYPLSDRKGIGRSIAVKRK
Sbjct: 1   MAVFGTSCSVEFGNEVVLGKMMWSKGVAFGCGSFRSVVKEVGYPLSDRKGIGRSIAVKRK 60

Query: 61  NKFSVVMNFSQSHLNSDAPAAAVSVTLSKEEEDAIRGKDFRSMEMSEVDKDKHDGELIDG 120
           NKFSVVMNFSQSHLNSDAPAAAVSVTLSKEEEDAIRGKDFRSMEMSEVDKDKHDGELIDG
Sbjct: 61  NKFSVVMNFSQSHLNSDAPAAAVSVTLSKEEEDAIRGKDFRSMEMSEVDKDKHDGELIDG 120

Query: 121 DGGNGTYNNGGGGGGGGGGDGGDDSRGDKEEEEFGPIMKFEEVMKELESRGVTLPSDMLE 180
           DGGNGTYNNGGGGGGGGGGDGGDDSRGDKEEEEFGPIMKFEEVMKELESRGVTLPSDMLE
Sbjct: 121 DGGNGTYNNGGGGGGGGGGDGGDDSRGDKEEEEFGPIMKFEEVMKELESRGVTLPSDMLE 180

Query: 181 AAKSEGIRKLLLLRYLEMQGLGWPLGFLMRSCALIRNRVLADPSFFFKVGVELVIDSCCA 240
           AAKSEGIRKLLLLRYLEMQGLGWPLGFLMRSCALIRNRVLADPSFFFKVGVELVIDSCCA
Sbjct: 181 AAKSEGIRKLLLLRYLEMQGLGWPLGFLMRSCALIRNRVLADPSFFFKVGVELVIDSCCA 240

Query: 241 TFAEVQKRGKDFWTEFELYLADILVGVAVNFALVALLAPYARFGQPSVSKGFLGRIQHAC 300
           TFAEVQKRGKDFWTEFELYLADILVGVAVNFALVALLAPYARFGQPSVSKGFLGRIQHAC
Sbjct: 241 TFAEVQKRGKDFWTEFELYLADILVGVAVNFALVALLAPYARFGQPSVSKGFLGRIQHAC 300

Query: 301 EALPSSVFEAERPGCRFSVQQRIATFFYKGLVYGVVGFGCGIIGQGIANLIMTAKRSIKK 360
           EALPSSVFEAERPGCRFSVQQRIATFFYKGLVYGVVGFGCGIIGQGIANLIMTAKRSIKK
Sbjct: 301 EALPSSVFEAERPGCRFSVQQRIATFFYKGLVYGVVGFGCGIIGQGIANLIMTAKRSIKK 360

Query: 361 SEDEVPVPPLFKSAALWGVFLALSSNTRYQIINGLERVVESSPLAKNIPAVAMAFTVGIR 420
           SEDEVPVPPLFKSAALWGVFLALSSNTRYQIINGLERVVESSPLAKNIPAVAMAFTVGIR
Sbjct: 361 SEDEVPVPPLFKSAALWGVFLALSSNTRYQIINGLERVVESSPLAKNIPAVAMAFTVGIR 420

Query: 421 FGNNVYAGMQFIDWARWSGVQ 442
           FGNNVYAGMQFIDWARWSGVQ
Sbjct: 421 FGNNVYAGMQFIDWARWSGVQ 441

[Close]

BLAST of IVF0014887.1 vs. ExPASy TrEMBL
Match: A0A0A0LFH3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G733360 PE=3 SV=1)

HSP 1 Score: 809.7 bits (2090), Expect = 6.1e-231
Identity = 417/441 (94.56%), Postives = 428/441 (97.05%), Query Frame = 0


Query: 1   MAVFGTSCSVEFGNEVVLGKMMWSKGVAFGCGSFRSVVKEVGYPLSDRKGIGRSIAVKRK 60
           MAVFGT  SVEFGNEVVLGKM+WS+GVAFGC SFRSVVKEV YP+SDRKGIGR I VKRK
Sbjct: 1   MAVFGTLYSVEFGNEVVLGKMVWSQGVAFGCRSFRSVVKEVAYPISDRKGIGRCIGVKRK 60

Query: 61  NKFSVVMNFSQSHLNSDAPAAAVSVTLSKEEEDAIRGKDFRSMEMSEVDKDKHDGELIDG 120
           NKFSVVM+FSQSHLNSDAPAAA  VT+SKEE+DAIRG+DFRSMEMSEV  DKHD ELIDG
Sbjct: 61  NKFSVVMSFSQSHLNSDAPAAA--VTVSKEEDDAIRGRDFRSMEMSEVVSDKHDAELIDG 120

Query: 121 DGGNGTYNNGGGGGGGGGGDGGDDSRGDKEEEEFGPIMKFEEVMKELESRGVTLPSDMLE 180
           +GGNG YNNGGGGGGG GGDGGDDSRGD+EEEEFGPIMKFEEVMKELESRGVTLPSDMLE
Sbjct: 121 NGGNGAYNNGGGGGGGRGGDGGDDSRGDREEEEFGPIMKFEEVMKELESRGVTLPSDMLE 180

Query: 181 AAKSEGIRKLLLLRYLEMQGLGWPLGFLMRSCALIRNRVLADPSFFFKVGVELVIDSCCA 240
           AAKSEGIRKLLLLRYLEMQGLGWPLGFLMRSCA+IRNRVLADPSFFFKVGVELVIDSCCA
Sbjct: 181 AAKSEGIRKLLLLRYLEMQGLGWPLGFLMRSCAMIRNRVLADPSFFFKVGVELVIDSCCA 240

Query: 241 TFAEVQKRGKDFWTEFELYLADILVGVAVNFALVALLAPYARFGQPSVSKGFLGRIQHAC 300
           TFAEVQKRGKDFWTEFELYLADILVGVAVNFALVALLAPYARFGQPSVSKGFLGRIQHAC
Sbjct: 241 TFAEVQKRGKDFWTEFELYLADILVGVAVNFALVALLAPYARFGQPSVSKGFLGRIQHAC 300

Query: 301 EALPSSVFEAERPGCRFSVQQRIATFFYKGLVYGVVGFGCGIIGQGIANLIMTAKRSIKK 360
           EALPSSVFEAERPGCRFSVQQRIATFFYKGLVYGVVGFGCGIIGQGIANLIMTAKRSIKK
Sbjct: 301 EALPSSVFEAERPGCRFSVQQRIATFFYKGLVYGVVGFGCGIIGQGIANLIMTAKRSIKK 360

Query: 361 SEDEVPVPPLFKSAALWGVFLALSSNTRYQIINGLERVVESSPLAKNIPAVAMAFTVGIR 420
           SE+EVPVPPLFKSAALWGVFLALSSNTRYQIINGLERVVESSPLAKNIPAVAMAFTVGIR
Sbjct: 361 SENEVPVPPLFKSAALWGVFLALSSNTRYQIINGLERVVESSPLAKNIPAVAMAFTVGIR 420

Query: 421 FGNNVYAGMQFIDWARWSGVQ 442
           FGNNVYAGMQFIDWARWSGVQ
Sbjct: 421 FGNNVYAGMQFIDWARWSGVQ 439

[Close]

BLAST of IVF0014887.1 vs. ExPASy TrEMBL
Match: A0A6J1F8K8 (protein RETICULATA, chloroplastic-like OS=Cucurbita moschata OX=3662 GN=LOC111441846 PE=3 SV=1)

HSP 1 Score: 720.3 bits (1858), Expect = 4.9e-204
Identity = 371/441 (84.13%), Postives = 401/441 (90.93%), Query Frame = 0


Query: 1   MAVFGTSCSVEFGNEVVLGKMMWSKGVAFGCGSFRSVVKEVGYPLSDRKGIGRSIAVKRK 60
           MAVFGTSCSV+FGNEV+LGK MWS+GVAFGC +FR+VVKEV YP S RK IGR I +KRK
Sbjct: 1   MAVFGTSCSVDFGNEVILGK-MWSRGVAFGCRAFRNVVKEVAYPASARKSIGRCITIKRK 60

Query: 61  NKFSVVMNFSQSHLNSDAPAAAVSVTLSKEEEDAIRGKDFRSMEMSEVDKDKHDGELIDG 120
           NKFSV+M+FSQSHL+SDAPAAA+ V  SKEE++ IRGKDFR  E+S+VD D         
Sbjct: 61  NKFSVMMDFSQSHLDSDAPAAAIPV--SKEEDETIRGKDFRISEISKVDND--------- 120

Query: 121 DGGNGTYNNGGGGGGGGGGDGGDDSRGDKEEEEFGPIMKFEEVMKELESRGVTLPSDMLE 180
           +GGNG YNNG GGG GGGG  GDD++GDKEEEEFGPIMKF+EVMKE+ESRGV+LPSDMLE
Sbjct: 121 NGGNGNYNNGEGGGRGGGGGNGDDNKGDKEEEEFGPIMKFDEVMKEVESRGVSLPSDMLE 180

Query: 181 AAKSEGIRKLLLLRYLEMQGLGWPLGFLMRSCALIRNRVLADPSFFFKVGVELVIDSCCA 240
           AAKS+GIRKLLLLRYLEMQGLGWPLGFLM+SCA++RNR+LADPSFFFKVGVELVIDSCCA
Sbjct: 181 AAKSKGIRKLLLLRYLEMQGLGWPLGFLMKSCAMLRNRMLADPSFFFKVGVELVIDSCCA 240

Query: 241 TFAEVQKRGKDFWTEFELYLADILVGVAVNFALVALLAPYARFGQPSVSKGFLGRIQHAC 300
           TFAEVQKRGKDFWTEFELYLADILVGV VNFALVALLAPYARFGQPSVSKGFLGR   AC
Sbjct: 241 TFAEVQKRGKDFWTEFELYLADILVGVGVNFALVALLAPYARFGQPSVSKGFLGRTLRAC 300

Query: 301 EALPSSVFEAERPGCRFSVQQRIATFFYKGLVYGVVGFGCGIIGQGIANLIMTAKRSIKK 360
           EALPSSVFEAERPGCRFSVQQRI TFFYKGL+YG +GFGCGIIGQGIANLIM +KRSIKK
Sbjct: 301 EALPSSVFEAERPGCRFSVQQRILTFFYKGLMYGAIGFGCGIIGQGIANLIMISKRSIKK 360

Query: 361 SEDEVPVPPLFKSAALWGVFLALSSNTRYQIINGLERVVESSPLAKNIPAVAMAFTVGIR 420
           SEDEVPVPPL KSAALWGVFLA+SSNTRYQIINGLERVVESS LAK IP VA+AFTVGIR
Sbjct: 361 SEDEVPVPPLLKSAALWGVFLAVSSNTRYQIINGLERVVESSALAKYIPTVALAFTVGIR 420

Query: 421 FGNNVYAGMQFIDWARWSGVQ 442
           FGNNVYAGMQFIDWARWSGVQ
Sbjct: 421 FGNNVYAGMQFIDWARWSGVQ 429

[Close]

BLAST of IVF0014887.1 vs. ExPASy TrEMBL
Match: A0A6J1CWQ6 (protein RETICULATA, chloroplastic-like isoform X1 OS=Momordica charantia OX=3673 GN=LOC111014999 PE=3 SV=1)

HSP 1 Score: 718.4 bits (1853), Expect = 1.8e-203
Identity = 373/442 (84.39%), Postives = 408/442 (92.31%), Query Frame = 0


Query: 1   MAVFGTSCSVEFGNEVVLGKMMWSKGVAFGCGSFRSVVKEVGYPLSDRKGIGRSIAVKRK 60
           MAVFGTS  +EFGNEV+LGK MWS+   FGC SFRS+VKEV YP++ RK IGR I+ KRK
Sbjct: 1   MAVFGTSYCLEFGNEVILGK-MWSQEAVFGCRSFRSLVKEVAYPVAVRKSIGRCISRKRK 60

Query: 61  NKFSVVMNFSQSHLNSDAPAAAVSVTLSKEEEDAIRGKDFRSMEMSEVDKDKHDGELIDG 120
           +KFSV+M+FSQSH++S+APAAA  VT+ KE +D+I  KD R +E+S+VD D   G++IDG
Sbjct: 61  DKFSVMMDFSQSHIDSEAPAAA--VTILKEGDDSIGDKDLRILEISKVDND-IQGDVIDG 120

Query: 121 DGGNGTYNNGGGGGGGGGGDGGDDSRGDKE-EEEFGPIMKFEEVMKELESRGVTLPSDML 180
           +GGNGTYN+   GGGGGGG GGDD+ GDKE EEEFGPIMKFEEVMKE+ESRGVTLPSDML
Sbjct: 121 NGGNGTYNH---GGGGGGGSGGDDNSGDKEDEEEFGPIMKFEEVMKEMESRGVTLPSDML 180

Query: 181 EAAKSEGIRKLLLLRYLEMQGLGWPLGFLMRSCALIRNRVLADPSFFFKVGVELVIDSCC 240
           EAAKS GIRKLLLLRYLEMQGLGWPLGFLM+SC++IRNRVLADPSFFFKVGVELVIDSCC
Sbjct: 181 EAAKSVGIRKLLLLRYLEMQGLGWPLGFLMKSCSMIRNRVLADPSFFFKVGVELVIDSCC 240

Query: 241 ATFAEVQKRGKDFWTEFELYLADILVGVAVNFALVALLAPYARFGQPSVSKGFLGRIQHA 300
           ATFAEVQKRGKDFWTEFELYLADILVGVAVNFALVALLAPYARFGQPSVSKGFLGRIQHA
Sbjct: 241 ATFAEVQKRGKDFWTEFELYLADILVGVAVNFALVALLAPYARFGQPSVSKGFLGRIQHA 300

Query: 301 CEALPSSVFEAERPGCRFSVQQRIATFFYKGLVYGVVGFGCGIIGQGIANLIMTAKRSIK 360
           C ALPSSVFEAERPGCRFS+QQRIATFFYKG VYG VGFGCGIIGQGIANLIMTAKRSIK
Sbjct: 301 CGALPSSVFEAERPGCRFSIQQRIATFFYKGFVYGAVGFGCGIIGQGIANLIMTAKRSIK 360

Query: 361 KSEDEVPVPPLFKSAALWGVFLALSSNTRYQIINGLERVVESSPLAKNIPAVAMAFTVGI 420
           KSE++VPVPPLFKSAALWGVFLA+SSNTRYQIINGLERVVESSPLAK+IPAVA+AFTVGI
Sbjct: 361 KSENDVPVPPLFKSAALWGVFLAISSNTRYQIINGLERVVESSPLAKHIPAVALAFTVGI 420

Query: 421 RFGNNVYAGMQFIDWARWSGVQ 442
           RFGNNVYAGMQF+DWARWSGVQ
Sbjct: 421 RFGNNVYAGMQFVDWARWSGVQ 435

[Close]

BLAST of IVF0014887.1 vs. NCBI nr
Match: XP_008442503.1 (PREDICTED: protein RETICULATA, chloroplastic-like [Cucumis melo] >KAA0044123.1 protein RETICULATA [Cucumis melo var. makuwa] >TYK25015.1 protein RETICULATA [Cucumis melo var. makuwa])

HSP 1 Score: 860 bits (2223), Expect = 1.22e-314
Identity = 441/441 (100.00%), Postives = 441/441 (100.00%), Query Frame = 0


Query: 1   MAVFGTSCSVEFGNEVVLGKMMWSKGVAFGCGSFRSVVKEVGYPLSDRKGIGRSIAVKRK 60
           MAVFGTSCSVEFGNEVVLGKMMWSKGVAFGCGSFRSVVKEVGYPLSDRKGIGRSIAVKRK
Sbjct: 1   MAVFGTSCSVEFGNEVVLGKMMWSKGVAFGCGSFRSVVKEVGYPLSDRKGIGRSIAVKRK 60

Query: 61  NKFSVVMNFSQSHLNSDAPAAAVSVTLSKEEEDAIRGKDFRSMEMSEVDKDKHDGELIDG 120
           NKFSVVMNFSQSHLNSDAPAAAVSVTLSKEEEDAIRGKDFRSMEMSEVDKDKHDGELIDG
Sbjct: 61  NKFSVVMNFSQSHLNSDAPAAAVSVTLSKEEEDAIRGKDFRSMEMSEVDKDKHDGELIDG 120

Query: 121 DGGNGTYNNGGGGGGGGGGDGGDDSRGDKEEEEFGPIMKFEEVMKELESRGVTLPSDMLE 180
           DGGNGTYNNGGGGGGGGGGDGGDDSRGDKEEEEFGPIMKFEEVMKELESRGVTLPSDMLE
Sbjct: 121 DGGNGTYNNGGGGGGGGGGDGGDDSRGDKEEEEFGPIMKFEEVMKELESRGVTLPSDMLE 180

Query: 181 AAKSEGIRKLLLLRYLEMQGLGWPLGFLMRSCALIRNRVLADPSFFFKVGVELVIDSCCA 240
           AAKSEGIRKLLLLRYLEMQGLGWPLGFLMRSCALIRNRVLADPSFFFKVGVELVIDSCCA
Sbjct: 181 AAKSEGIRKLLLLRYLEMQGLGWPLGFLMRSCALIRNRVLADPSFFFKVGVELVIDSCCA 240

Query: 241 TFAEVQKRGKDFWTEFELYLADILVGVAVNFALVALLAPYARFGQPSVSKGFLGRIQHAC 300
           TFAEVQKRGKDFWTEFELYLADILVGVAVNFALVALLAPYARFGQPSVSKGFLGRIQHAC
Sbjct: 241 TFAEVQKRGKDFWTEFELYLADILVGVAVNFALVALLAPYARFGQPSVSKGFLGRIQHAC 300

Query: 301 EALPSSVFEAERPGCRFSVQQRIATFFYKGLVYGVVGFGCGIIGQGIANLIMTAKRSIKK 360
           EALPSSVFEAERPGCRFSVQQRIATFFYKGLVYGVVGFGCGIIGQGIANLIMTAKRSIKK
Sbjct: 301 EALPSSVFEAERPGCRFSVQQRIATFFYKGLVYGVVGFGCGIIGQGIANLIMTAKRSIKK 360

Query: 361 SEDEVPVPPLFKSAALWGVFLALSSNTRYQIINGLERVVESSPLAKNIPAVAMAFTVGIR 420
           SEDEVPVPPLFKSAALWGVFLALSSNTRYQIINGLERVVESSPLAKNIPAVAMAFTVGIR
Sbjct: 361 SEDEVPVPPLFKSAALWGVFLALSSNTRYQIINGLERVVESSPLAKNIPAVAMAFTVGIR 420

Query: 421 FGNNVYAGMQFIDWARWSGVQ 441
           FGNNVYAGMQFIDWARWSGVQ
Sbjct: 421 FGNNVYAGMQFIDWARWSGVQ 441

[Close]

BLAST of IVF0014887.1 vs. NCBI nr
Match: XP_004137924.1 (protein RETICULATA, chloroplastic [Cucumis sativus] >XP_031738607.1 protein RETICULATA, chloroplastic [Cucumis sativus] >KGN58831.1 hypothetical protein Csa_002581 [Cucumis sativus])

HSP 1 Score: 809 bits (2090), Expect = 2.04e-294
Identity = 417/441 (94.56%), Postives = 428/441 (97.05%), Query Frame = 0


Query: 1   MAVFGTSCSVEFGNEVVLGKMMWSKGVAFGCGSFRSVVKEVGYPLSDRKGIGRSIAVKRK 60
           MAVFGT  SVEFGNEVVLGKM+WS+GVAFGC SFRSVVKEV YP+SDRKGIGR I VKRK
Sbjct: 1   MAVFGTLYSVEFGNEVVLGKMVWSQGVAFGCRSFRSVVKEVAYPISDRKGIGRCIGVKRK 60

Query: 61  NKFSVVMNFSQSHLNSDAPAAAVSVTLSKEEEDAIRGKDFRSMEMSEVDKDKHDGELIDG 120
           NKFSVVM+FSQSHLNSDAPAAAV  T+SKEE+DAIRG+DFRSMEMSEV  DKHD ELIDG
Sbjct: 61  NKFSVVMSFSQSHLNSDAPAAAV--TVSKEEDDAIRGRDFRSMEMSEVVSDKHDAELIDG 120

Query: 121 DGGNGTYNNGGGGGGGGGGDGGDDSRGDKEEEEFGPIMKFEEVMKELESRGVTLPSDMLE 180
           +GGNG YNNGGGGGGG GGDGGDDSRGD+EEEEFGPIMKFEEVMKELESRGVTLPSDMLE
Sbjct: 121 NGGNGAYNNGGGGGGGRGGDGGDDSRGDREEEEFGPIMKFEEVMKELESRGVTLPSDMLE 180

Query: 181 AAKSEGIRKLLLLRYLEMQGLGWPLGFLMRSCALIRNRVLADPSFFFKVGVELVIDSCCA 240
           AAKSEGIRKLLLLRYLEMQGLGWPLGFLMRSCA+IRNRVLADPSFFFKVGVELVIDSCCA
Sbjct: 181 AAKSEGIRKLLLLRYLEMQGLGWPLGFLMRSCAMIRNRVLADPSFFFKVGVELVIDSCCA 240

Query: 241 TFAEVQKRGKDFWTEFELYLADILVGVAVNFALVALLAPYARFGQPSVSKGFLGRIQHAC 300
           TFAEVQKRGKDFWTEFELYLADILVGVAVNFALVALLAPYARFGQPSVSKGFLGRIQHAC
Sbjct: 241 TFAEVQKRGKDFWTEFELYLADILVGVAVNFALVALLAPYARFGQPSVSKGFLGRIQHAC 300

Query: 301 EALPSSVFEAERPGCRFSVQQRIATFFYKGLVYGVVGFGCGIIGQGIANLIMTAKRSIKK 360
           EALPSSVFEAERPGCRFSVQQRIATFFYKGLVYGVVGFGCGIIGQGIANLIMTAKRSIKK
Sbjct: 301 EALPSSVFEAERPGCRFSVQQRIATFFYKGLVYGVVGFGCGIIGQGIANLIMTAKRSIKK 360

Query: 361 SEDEVPVPPLFKSAALWGVFLALSSNTRYQIINGLERVVESSPLAKNIPAVAMAFTVGIR 420
           SE+EVPVPPLFKSAALWGVFLALSSNTRYQIINGLERVVESSPLAKNIPAVAMAFTVGIR
Sbjct: 361 SENEVPVPPLFKSAALWGVFLALSSNTRYQIINGLERVVESSPLAKNIPAVAMAFTVGIR 420

Query: 421 FGNNVYAGMQFIDWARWSGVQ 441
           FGNNVYAGMQFIDWARWSGVQ
Sbjct: 421 FGNNVYAGMQFIDWARWSGVQ 439

[Close]

BLAST of IVF0014887.1 vs. NCBI nr
Match: XP_038903927.1 (protein RETICULATA, chloroplastic-like [Benincasa hispida])

HSP 1 Score: 788 bits (2036), Expect = 3.57e-286
Identity = 406/443 (91.65%), Postives = 428/443 (96.61%), Query Frame = 0


Query: 1   MAVFGTSCSVEFGNEVVLGKMMWSKGVAFGCGSFRSVVKEVGYPLSDRKGIGRSIAVKRK 60
           MAVFG S SVEFGNEVVLGK+ WS+GVAFGC SFR+VVKEV YP+SDRKGIGR IAVKRK
Sbjct: 1   MAVFGISYSVEFGNEVVLGKI-WSQGVAFGCRSFRNVVKEVAYPISDRKGIGRCIAVKRK 60

Query: 61  NKFSVVMNFSQSHLNSDAPAAAVSVTLSKEEEDAIRGKDFRSMEMSEVDKDKHDGELIDG 120
           NKFSVVMNFS+SHL+SDAPAAA+  T+SKE+++ IRGKDFRS+E+SEVD DKHDG+LIDG
Sbjct: 61  NKFSVVMNFSKSHLDSDAPAAAI--TVSKEKDEPIRGKDFRSLEISEVDIDKHDGDLIDG 120

Query: 121 DGGNGTYNNGGGGGGGGGGDGG--DDSRGDKEEEEFGPIMKFEEVMKELESRGVTLPSDM 180
           +GGNGTYNNGGGGGGGGGG GG  DDSRGDKEEEEFGPIMKFEEVMKE+ESRGVTLPSDM
Sbjct: 121 NGGNGTYNNGGGGGGGGGGGGGGGDDSRGDKEEEEFGPIMKFEEVMKEVESRGVTLPSDM 180

Query: 181 LEAAKSEGIRKLLLLRYLEMQGLGWPLGFLMRSCALIRNRVLADPSFFFKVGVELVIDSC 240
           LEAAKSEGIRKLLLLRYLEMQGLGWPLGFLMRSC +IRNRVLADPSFFFKVGVELVIDSC
Sbjct: 181 LEAAKSEGIRKLLLLRYLEMQGLGWPLGFLMRSCGMIRNRVLADPSFFFKVGVELVIDSC 240

Query: 241 CATFAEVQKRGKDFWTEFELYLADILVGVAVNFALVALLAPYARFGQPSVSKGFLGRIQH 300
           CATFAEVQKRGKDFWTEFELYLADILVGVAVNFALVALLAPYARFGQPSVSKGFLGRI H
Sbjct: 241 CATFAEVQKRGKDFWTEFELYLADILVGVAVNFALVALLAPYARFGQPSVSKGFLGRIHH 300

Query: 301 ACEALPSSVFEAERPGCRFSVQQRIATFFYKGLVYGVVGFGCGIIGQGIANLIMTAKRSI 360
           ACEALPSSVFEAERPGCRFSVQQRIATFFYKGL+YGVVGFGCGI+GQGIANLIMTAKRSI
Sbjct: 301 ACEALPSSVFEAERPGCRFSVQQRIATFFYKGLMYGVVGFGCGILGQGIANLIMTAKRSI 360

Query: 361 KKSEDEVPVPPLFKSAALWGVFLALSSNTRYQIINGLERVVESSPLAKNIPAVAMAFTVG 420
           KKSEDEVPVPPLFKSAALWGVFLA+SSNTRYQIINGLER+VESSPLAKNIPAVA+AFTVG
Sbjct: 361 KKSEDEVPVPPLFKSAALWGVFLAVSSNTRYQIINGLERLVESSPLAKNIPAVALAFTVG 420

Query: 421 IRFGNNVYAGMQFIDWARWSGVQ 441
           IRFGNNVYAGMQFIDWARWSGVQ
Sbjct: 421 IRFGNNVYAGMQFIDWARWSGVQ 440

[Close]

BLAST of IVF0014887.1 vs. NCBI nr
Match: KAG6580514.1 (Protein RETICULATA-RELATED 1, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 721 bits (1861), Expect = 1.15e-259
Identity = 372/443 (83.97%), Postives = 401/443 (90.52%), Query Frame = 0


Query: 1   MAVFGTSCSVEFGNEVVLGKMMWSKGVAFGCGSFRSVVKEVGYPLSDRKGIGRSIAVKRK 60
           MAVFGTSCSV+FGNEV+LGKM WS+GVAFGCG+FR+VVKEV YP S RK IGR I +K K
Sbjct: 1   MAVFGTSCSVDFGNEVILGKM-WSRGVAFGCGAFRNVVKEVAYPASARKSIGRCITIKSK 60

Query: 61  NKFSVVMNFSQSHLNSDAPAAAVSVTLSKEEEDAIRGKDFRSMEMSEVDKDKHDGELIDG 120
           NKFSV+M+FSQSHL+SDAPAAA+ V  SKEE++ IRGKDFR  E+S+VD D         
Sbjct: 61  NKFSVMMDFSQSHLDSDAPAAAIPV--SKEEDETIRGKDFRISEISKVDNDN-------- 120

Query: 121 DGGNGTYNNG--GGGGGGGGGDGGDDSRGDKEEEEFGPIMKFEEVMKELESRGVTLPSDM 180
            GGNG YNNG  GGGGGGGGG  GDD++GDKEEEEFGPIMKF+EVMKE+E+RGV+LPSDM
Sbjct: 121 -GGNGNYNNGKGGGGGGGGGGGSGDDNKGDKEEEEFGPIMKFDEVMKEVEARGVSLPSDM 180

Query: 181 LEAAKSEGIRKLLLLRYLEMQGLGWPLGFLMRSCALIRNRVLADPSFFFKVGVELVIDSC 240
           LEAAK EGIRKLLLLRYLEMQGLGWPLGFLM+SCA++RNR+LADPSFFFKVGVELVIDSC
Sbjct: 181 LEAAKGEGIRKLLLLRYLEMQGLGWPLGFLMKSCAMLRNRMLADPSFFFKVGVELVIDSC 240

Query: 241 CATFAEVQKRGKDFWTEFELYLADILVGVAVNFALVALLAPYARFGQPSVSKGFLGRIQH 300
           CATFAEVQKRGKDFWTEFELYLADILVGV VNFALVALLAPYARFGQPSVSKGFLGR   
Sbjct: 241 CATFAEVQKRGKDFWTEFELYLADILVGVGVNFALVALLAPYARFGQPSVSKGFLGRTLR 300

Query: 301 ACEALPSSVFEAERPGCRFSVQQRIATFFYKGLVYGVVGFGCGIIGQGIANLIMTAKRSI 360
           ACEALPSSVFEAERPGCRFSVQQRI TFFYKGL+YG +GFGCGIIGQGIANLIM +KRSI
Sbjct: 301 ACEALPSSVFEAERPGCRFSVQQRILTFFYKGLMYGAIGFGCGIIGQGIANLIMISKRSI 360

Query: 361 KKSEDEVPVPPLFKSAALWGVFLALSSNTRYQIINGLERVVESSPLAKNIPAVAMAFTVG 420
           KKSEDEVPVPPL KSAALWGVFLA+SSNTRYQIINGLERVVESS LAK IP VA+AFTVG
Sbjct: 361 KKSEDEVPVPPLLKSAALWGVFLAVSSNTRYQIINGLERVVESSALAKYIPTVALAFTVG 420

Query: 421 IRFGNNVYAGMQFIDWARWSGVQ 441
           IRFGNNVYAGMQFIDWARWSGVQ
Sbjct: 421 IRFGNNVYAGMQFIDWARWSGVQ 431

[Close]

BLAST of IVF0014887.1 vs. NCBI nr
Match: XP_022934768.1 (protein RETICULATA, chloroplastic-like [Cucurbita moschata] >XP_022934769.1 protein RETICULATA, chloroplastic-like [Cucurbita moschata])

HSP 1 Score: 720 bits (1859), Expect = 2.16e-259
Identity = 371/441 (84.13%), Postives = 400/441 (90.70%), Query Frame = 0


Query: 1   MAVFGTSCSVEFGNEVVLGKMMWSKGVAFGCGSFRSVVKEVGYPLSDRKGIGRSIAVKRK 60
           MAVFGTSCSV+FGNEV+LGKM WS+GVAFGC +FR+VVKEV YP S RK IGR I +KRK
Sbjct: 1   MAVFGTSCSVDFGNEVILGKM-WSRGVAFGCRAFRNVVKEVAYPASARKSIGRCITIKRK 60

Query: 61  NKFSVVMNFSQSHLNSDAPAAAVSVTLSKEEEDAIRGKDFRSMEMSEVDKDKHDGELIDG 120
           NKFSV+M+FSQSHL+SDAPAAA+ V  SKEE++ IRGKDFR  E+S+VD D         
Sbjct: 61  NKFSVMMDFSQSHLDSDAPAAAIPV--SKEEDETIRGKDFRISEISKVDNDN-------- 120

Query: 121 DGGNGTYNNGGGGGGGGGGDGGDDSRGDKEEEEFGPIMKFEEVMKELESRGVTLPSDMLE 180
            GGNG YNNG GGG GGGG  GDD++GDKEEEEFGPIMKF+EVMKE+ESRGV+LPSDMLE
Sbjct: 121 -GGNGNYNNGEGGGRGGGGGNGDDNKGDKEEEEFGPIMKFDEVMKEVESRGVSLPSDMLE 180

Query: 181 AAKSEGIRKLLLLRYLEMQGLGWPLGFLMRSCALIRNRVLADPSFFFKVGVELVIDSCCA 240
           AAKS+GIRKLLLLRYLEMQGLGWPLGFLM+SCA++RNR+LADPSFFFKVGVELVIDSCCA
Sbjct: 181 AAKSKGIRKLLLLRYLEMQGLGWPLGFLMKSCAMLRNRMLADPSFFFKVGVELVIDSCCA 240

Query: 241 TFAEVQKRGKDFWTEFELYLADILVGVAVNFALVALLAPYARFGQPSVSKGFLGRIQHAC 300
           TFAEVQKRGKDFWTEFELYLADILVGV VNFALVALLAPYARFGQPSVSKGFLGR   AC
Sbjct: 241 TFAEVQKRGKDFWTEFELYLADILVGVGVNFALVALLAPYARFGQPSVSKGFLGRTLRAC 300

Query: 301 EALPSSVFEAERPGCRFSVQQRIATFFYKGLVYGVVGFGCGIIGQGIANLIMTAKRSIKK 360
           EALPSSVFEAERPGCRFSVQQRI TFFYKGL+YG +GFGCGIIGQGIANLIM +KRSIKK
Sbjct: 301 EALPSSVFEAERPGCRFSVQQRILTFFYKGLMYGAIGFGCGIIGQGIANLIMISKRSIKK 360

Query: 361 SEDEVPVPPLFKSAALWGVFLALSSNTRYQIINGLERVVESSPLAKNIPAVAMAFTVGIR 420
           SEDEVPVPPL KSAALWGVFLA+SSNTRYQIINGLERVVESS LAK IP VA+AFTVGIR
Sbjct: 361 SEDEVPVPPLLKSAALWGVFLAVSSNTRYQIINGLERVVESSALAKYIPTVALAFTVGIR 420

Query: 421 FGNNVYAGMQFIDWARWSGVQ 441
           FGNNVYAGMQFIDWARWSGVQ
Sbjct: 421 FGNNVYAGMQFIDWARWSGVQ 429

[Close]

BLAST of IVF0014887.1 vs. TAIR 10
Match: AT2G37860.3 (Protein of unknown function (DUF3411) )

HSP 1 Score: 492.7 bits (1267), Expect = 3.2e-139
Identity = 269/439 (61.28%), Postives = 327/439 (74.49%), Query Frame = 0


Query: 5   GTSCSVEFGNEVVLGKMMWSKGVAFGCGSFRSVVKEVGYP-LSDRKGIGRSIAVKRKNKF 64
           G + +++F + V +   + S G+      FR + K +  P L  R G GR    +R   F
Sbjct: 3   GCAMNLQFSSVVKVRNEISSFGICNRDFVFRDLAKAMKVPVLRIRGGSGR----QRSRLF 62

Query: 65  SVVMNFSQSHLNSDAPAAAVSVTLSKEEEDAIRGKD-FRSMEMSEVDKDKHDGELIDGDG 124
             V+N SQS +   +   A +  +  E +++I GKD  R++   +++    DG +  GDG
Sbjct: 63  --VVNMSQSPIEPQSGGFAATEQIKGEGDNSILGKDNVRNLGTDQLENLDIDGNV--GDG 122

Query: 125 GNGTYNNGGGGGGGGGGDGGDDSRGDKEEEEFGPIMKFEEVMKELESRGVTLPSDMLEAA 184
            NG+  NGGGGGGG GG+ GD    D EE+EFGPI+KFEEVMKE E+RG TLPSDMLEAA
Sbjct: 123 FNGSDGNGGGGGGGNGGE-GDGEGEDYEEKEFGPILKFEEVMKETEARGATLPSDMLEAA 182

Query: 185 KSEGIRKLLLLRYLEMQGLGWPLGFLMRSCALIRNRVLADPSFFFKVGVELVIDSCCATF 244
           K+ GIRK+LLLRYL++Q     LGF +RS A++RNR+LADPSF FK+G E+VIDSCCAT 
Sbjct: 183 KNYGIRKVLLLRYLDLQSSAGLLGFAIRSWAMLRNRMLADPSFLFKIGAEIVIDSCCATV 242

Query: 245 AEVQKRGKDFWTEFELYLADILVGVAVNFALVALLAPYARFGQPSVSKGFLGRIQHACEA 304
           AEVQKRGKDFW EFELY+AD+LVG  VN ALV +LAPY RFGQPS S GFLGR+  A  A
Sbjct: 243 AEVQKRGKDFWAEFELYVADLLVGTVVNIALVGMLAPYVRFGQPSASPGFLGRMVFAYNA 302

Query: 305 LPSSVFEAERPGCRFSVQQRIATFFYKGLVYGVVGFGCGIIGQGIANLIMTAKRSIKKSE 364
           LPSSVFEAERPGCRFS QQR+AT+FYKG++YG VGFGCGI+GQGIANLIMTAKR+I KSE
Sbjct: 303 LPSSVFEAERPGCRFSAQQRLATYFYKGIMYGAVGFGCGIVGQGIANLIMTAKRNINKSE 362

Query: 365 DEVPVPPLFKSAALWGVFLALSSNTRYQIINGLERVVESSPLAKNIPAVAMAFTVGIRFG 424
           + +PVPPL KSAALWGVFL++SSNTRYQIINGLERVVE+SP AK  P  AMAFTVG+R  
Sbjct: 363 ENIPVPPLIKSAALWGVFLSVSSNTRYQIINGLERVVEASPFAKKFPPAAMAFTVGVRLA 422

Query: 425 NNVYAGMQFIDWARWSGVQ 442
           NN+Y GMQF+DWAR SG Q
Sbjct: 423 NNIYGGMQFVDWARLSGCQ 432

[Close]

BLAST of IVF0014887.1 vs. TAIR 10
Match: AT5G22790.1 (reticulata-related 1 )

HSP 1 Score: 486.1 bits (1250), Expect = 3.0e-137
Identity = 251/337 (74.48%), Postives = 282/337 (83.68%), Query Frame = 0


Query: 116 ELIDGDGGNGTYNNGGGG------GGGGGGDG----GDDSRGDKEEEEFGPIMKFEEVMK 175
           EL DGDGG+   NN GGG      GGGGGGDG    G+D     EE+EFGPI+KFEEVMK
Sbjct: 97  ELDDGDGGDENGNNDGGGNGGNGDGGGGGGDGEGDDGEDEADKAEEKEFGPILKFEEVMK 156

Query: 176 ELESRGVTLPSDMLEAAKSEGIRKLLLLRYLEMQGLGWPLGFLMRSCALIRNRVLADPSF 235
           E E RG+TLP DMLEAAKS GIRKL LLRYL++QG  WPLGFLMRSCA++RNR+LADPSF
Sbjct: 157 ETERRGITLPEDMLEAAKSVGIRKLFLLRYLDLQGSVWPLGFLMRSCAMLRNRMLADPSF 216

Query: 236 FFKVGVELVIDSCCATFAEVQKRGKDFWTEFELYLADILVGVAVNFALVALLAPYARFGQ 295
            FKVG E+ IDSCCATFAEVQKRG+DFW+EFELY AD+LVG+ V+ ALV LLAPYAR G+
Sbjct: 217 LFKVGTEVAIDSCCATFAEVQKRGEDFWSEFELYAADLLVGLVVDVALVGLLAPYARIGK 276

Query: 296 PSV-SKGFLGRIQHACEALPSSVFEAERPGCRFSVQQRIATFFYKGLVYGVVGFGCGIIG 355
           PSV S G    ++ AC +LPSSVFEAERPGC+FSV QRIATFFYKGL+YG VGFGCG+IG
Sbjct: 277 PSVASTGLFKDLKRACASLPSSVFEAERPGCKFSVNQRIATFFYKGLLYGSVGFGCGLIG 336

Query: 356 QGIANLIMTAKRSIKKSEDEVPVPPLFKSAALWGVFLALSSNTRYQIINGLERVVESSPL 415
           QGIANLIMTAKRS+KKSE++VP+PPLF+SAALWGVFL LSSN RYQIINGLERVVE S  
Sbjct: 337 QGIANLIMTAKRSVKKSEEDVPIPPLFESAALWGVFLGLSSNARYQIINGLERVVEGSTA 396

Query: 416 AKNIPAVAMAFTVGIRFGNNVYAGMQFIDWARWSGVQ 442
           AK IP VAMAFTVG+RF NNVY GMQF+DWA+ SGVQ
Sbjct: 397 AKRIPVVAMAFTVGVRFANNVYGGMQFVDWAKLSGVQ 433

[Close]

BLAST of IVF0014887.1 vs. TAIR 10
Match: AT2G37860.2 (Protein of unknown function (DUF3411) )

HSP 1 Score: 357.8 bits (917), Expect = 1.2e-98
Identity = 206/354 (58.19%), Postives = 255/354 (72.03%), Query Frame = 0


Query: 5   GTSCSVEFGNEVVLGKMMWSKGVAFGCGSFRSVVKEVGYP-LSDRKGIGRSIAVKRKNKF 64
           G + +++F + V +   + S G+      FR + K +  P L  R G GR    +R   F
Sbjct: 3   GCAMNLQFSSVVKVRNEISSFGICNRDFVFRDLAKAMKVPVLRIRGGSGR----QRSRLF 62

Query: 65  SVVMNFSQSHLNSDAPAAAVSVTLSKEEEDAIRGKD-FRSMEMSEVDKDKHDGELIDGDG 124
             V+N SQS +   +   A +  +  E +++I GKD  R++   +++    DG +  GDG
Sbjct: 63  --VVNMSQSPIEPQSGGFAATEQIKGEGDNSILGKDNVRNLGTDQLENLDIDGNV--GDG 122

Query: 125 GNGTYNNGGGGGGGGGGDGGDDSRGDKEEEEFGPIMKFEEVMKELESRGVTLPSDMLEAA 184
            NG+  NGGGGGGG GG+ GD    D EE+EFGPI+KFEEVMKE E+RG TLPSDMLEAA
Sbjct: 123 FNGSDGNGGGGGGGNGGE-GDGEGEDYEEKEFGPILKFEEVMKETEARGATLPSDMLEAA 182

Query: 185 KSEGIRKLLLLRYLEMQGLGWPLGFLMRSCALIRNRVLADPSFFFKVGVELVIDSCCATF 244
           K+ GIRK+LLLRYL++Q     LGF +RS A++RNR+LADPSF FK+G E+VIDSCCAT 
Sbjct: 183 KNYGIRKVLLLRYLDLQSSAGLLGFAIRSWAMLRNRMLADPSFLFKIGAEIVIDSCCATV 242

Query: 245 AEVQKRGKDFWTEFELYLADILVGVAVNFALVALLAPYARFGQPSVSKGFLGRIQHACEA 304
           AEVQKRGKDFW EFELY+AD+LVG  VN ALV +LAPY RFGQPS S GFLGR+  A  A
Sbjct: 243 AEVQKRGKDFWAEFELYVADLLVGTVVNIALVGMLAPYVRFGQPSASPGFLGRMVFAYNA 302

Query: 305 LPSSVFEAERPGCRFSVQQRIATFFYKGLVYGVVGFGCGIIGQGIANLIMTAKR 357
           LPSSVFEAERPGCRFS QQR+AT+FYKG++YG VGFGCGI+GQGIANLIMTAKR
Sbjct: 303 LPSSVFEAERPGCRFSAQQRLATYFYKGIMYGAVGFGCGIVGQGIANLIMTAKR 347

[Close]

BLAST of IVF0014887.1 vs. TAIR 10
Match: AT2G37860.1 (Protein of unknown function (DUF3411) )

HSP 1 Score: 357.8 bits (917), Expect = 1.2e-98
Identity = 206/354 (58.19%), Postives = 255/354 (72.03%), Query Frame = 0


Query: 5   GTSCSVEFGNEVVLGKMMWSKGVAFGCGSFRSVVKEVGYP-LSDRKGIGRSIAVKRKNKF 64
           G + +++F + V +   + S G+      FR + K +  P L  R G GR    +R   F
Sbjct: 3   GCAMNLQFSSVVKVRNEISSFGICNRDFVFRDLAKAMKVPVLRIRGGSGR----QRSRLF 62

Query: 65  SVVMNFSQSHLNSDAPAAAVSVTLSKEEEDAIRGKD-FRSMEMSEVDKDKHDGELIDGDG 124
             V+N SQS +   +   A +  +  E +++I GKD  R++   +++    DG +  GDG
Sbjct: 63  --VVNMSQSPIEPQSGGFAATEQIKGEGDNSILGKDNVRNLGTDQLENLDIDGNV--GDG 122

Query: 125 GNGTYNNGGGGGGGGGGDGGDDSRGDKEEEEFGPIMKFEEVMKELESRGVTLPSDMLEAA 184
            NG+  NGGGGGGG GG+ GD    D EE+EFGPI+KFEEVMKE E+RG TLPSDMLEAA
Sbjct: 123 FNGSDGNGGGGGGGNGGE-GDGEGEDYEEKEFGPILKFEEVMKETEARGATLPSDMLEAA 182

Query: 185 KSEGIRKLLLLRYLEMQGLGWPLGFLMRSCALIRNRVLADPSFFFKVGVELVIDSCCATF 244
           K+ GIRK+LLLRYL++Q     LGF +RS A++RNR+LADPSF FK+G E+VIDSCCAT 
Sbjct: 183 KNYGIRKVLLLRYLDLQSSAGLLGFAIRSWAMLRNRMLADPSFLFKIGAEIVIDSCCATV 242

Query: 245 AEVQKRGKDFWTEFELYLADILVGVAVNFALVALLAPYARFGQPSVSKGFLGRIQHACEA 304
           AEVQKRGKDFW EFELY+AD+LVG  VN ALV +LAPY RFGQPS S GFLGR+  A  A
Sbjct: 243 AEVQKRGKDFWAEFELYVADLLVGTVVNIALVGMLAPYVRFGQPSASPGFLGRMVFAYNA 302

Query: 305 LPSSVFEAERPGCRFSVQQRIATFFYKGLVYGVVGFGCGIIGQGIANLIMTAKR 357
           LPSSVFEAERPGCRFS QQR+AT+FYKG++YG VGFGCGI+GQGIANLIMTAKR
Sbjct: 303 LPSSVFEAERPGCRFSAQQRLATYFYKGIMYGAVGFGCGIVGQGIANLIMTAKR 347

[Close]

BLAST of IVF0014887.1 vs. TAIR 10
Match: AT5G12470.1 (Protein of unknown function (DUF3411) )

HSP 1 Score: 129.0 bits (323), Expect = 9.2e-30
Identity = 101/340 (29.71%), Postives = 171/340 (50.29%), Query Frame = 0


Query: 117 LIDGDGGNGTYNNGGGG--GGGGGGDGG---DDSRGDKEEEEFGPIMKFEEVMKELESRG 176
           ++    GNG  +N GGG  GGGGGGDGG    D  GD++ +         E M  L+  G
Sbjct: 59  VLSASSGNGGSDNNGGGLSGGGGGGDGGKNDGDGHGDEDRDR-----NRNEAMLLLKESG 118

Query: 177 V---TLPSDMLEAAKSEGIRKLLLLRYLEMQG---LGWPLGFLMRSCALIRNRVLADPSF 236
           +   +LP D+  A ++  I   ++ R+LE+Q    + W + F        R R+LAD  F
Sbjct: 119 IELESLPKDLAAAIEAGRIPGSVITRFLELQKSAVMRWLMQF-----GGFRERLLADDLF 178

Query: 237 FFKVGVELVIDSCCATFAEVQKRGKDFWTEFELYLADILVGVAVNFALVALLAPYARFGQ 296
             K+ +E  +     T AE ++R ++F+ E E+  AD+ + +  +F LV L AP      
Sbjct: 179 MAKLAMECGVGIFTKTAAEYERRRENFFNELEVVFADVAMAIIADFMLVYLPAPTVSLRP 238

Query: 297 P-SVSKGFLGRIQHACEALPSSVFEAERPGCRFSVQQRIATFFYKGLVYGVVGFGCGIIG 356
           P +++ G + +  H C   P + F+    G  +++ QR+      G     VG    ++G
Sbjct: 239 PLALTAGGISKFFHNC---PDNAFQVALSGTSYTLLQRLGAITRNGAKLFAVGTTSSLVG 298

Query: 357 QGIANLIMTAKRSI-KKSEDEVPVPPLFKSAALWGVFLALSSNTRYQIINGL--ERVVES 416
             I N  + A++++ + SE EV   P+  ++  +GV++A+SSN RYQI+ G+  +R++E 
Sbjct: 299 TAITNAFIKARKAVDQNSEGEVETVPIVSTSVAYGVYMAVSSNLRYQIVAGVIEQRLLE- 358

Query: 417 SPLAKNIPAVAMAFTVGIRFGNNVYAGMQFIDWARWSGVQ 442
            P+         A    +R GN     + ++D+AR  G+Q
Sbjct: 359 -PMLHQHKLALSALCFAVRTGNTFLGSLLWVDYARLIGIQ 383

The following BLAST results are available for this feature:

BLAST of IVF0014887.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
B9DFK5	4.5e-138	61.28	Protein RETICULATA, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=RE PE=1 SV=...	[more]
Q9FGP9	4.2e-136	74.48	Protein RETICULATA-RELATED 1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=R...	[more]
Q94CJ5	1.3e-28	29.71	Protein RETICULATA-RELATED 4, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=R...	[more]
Q9C9Z3	4.5e-21	28.70	Protein RETICULATA-RELATED 2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=R...	[more]
Q9C9Z2	9.9e-21	30.28	Protein RETICULATA-RELATED 3, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=R...	[more]

BLAST of IVF0014887.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7TKU7	3.0e-246	100.00	Protein RETICULATA OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G0...	[more]
A0A1S3B6H2	3.0e-246	100.00	protein RETICULATA, chloroplastic-like OS=Cucumis melo OX=3656 GN=LOC103486354 P...	[more]
A0A0A0LFH3	6.1e-231	94.56	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G733360 PE=3 SV=1	[more]
A0A6J1F8K8	4.9e-204	84.13	protein RETICULATA, chloroplastic-like OS=Cucurbita moschata OX=3662 GN=LOC11144...	[more]
A0A6J1CWQ6	1.8e-203	84.39	protein RETICULATA, chloroplastic-like isoform X1 OS=Momordica charantia OX=3673...	[more]

BLAST of IVF0014887.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008442503.1	1.22e-314	100.00	PREDICTED: protein RETICULATA, chloroplastic-like [Cucumis melo] >KAA0044123.1 p...	[more]
XP_004137924.1	2.04e-294	94.56	protein RETICULATA, chloroplastic [Cucumis sativus] >XP_031738607.1 protein RETI...	[more]
XP_038903927.1	3.57e-286	91.65	protein RETICULATA, chloroplastic-like [Benincasa hispida]	[more]
KAG6580514.1	1.15e-259	83.97	Protein RETICULATA-RELATED 1, chloroplastic, partial [Cucurbita argyrosperma sub...	[more]
XP_022934768.1	2.16e-259	84.13	protein RETICULATA, chloroplastic-like [Cucurbita moschata] >XP_022934769.1 prot...	[more]

BLAST of IVF0014887.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G37860.3	3.2e-139	61.28	Protein of unknown function (DUF3411)	[more]
AT5G22790.1	3.0e-137	74.48	reticulata-related 1	[more]
AT2G37860.2	1.2e-98	58.19	Protein of unknown function (DUF3411)	[more]
AT2G37860.1	1.2e-98	58.19	Protein of unknown function (DUF3411)	[more]
AT5G12470.1	9.2e-30	29.71	Protein of unknown function (DUF3411)	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR021825	Protein RETICULATA-related	PFAM	PF11891	RETICULATA-like	coord: 217..395 e-value: 1.6E-66 score: 223.4
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 106..152
None	No IPR available	PANTHER	PTHR31038:SF18	PROTEIN RETICULATA-RELATED 1, CHLOROPLASTIC	coord: 67..441
None	No IPR available	PANTHER	PTHR31038	EXPRESSED PROTEIN-RELATED	coord: 67..441

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
IVF0014887	IVF0014887	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
IVF0014887.1-exon	IVF0014887.1-exon-chr04:31444847..31445443	exon
IVF0014887.1-exon	IVF0014887.1-exon-chr04:31445528..31445626	exon
IVF0014887.1-exon	IVF0014887.1-exon-chr04:31446046..31446266	exon
IVF0014887.1-exon	IVF0014887.1-exon-chr04:31446455..31446524	exon
IVF0014887.1-exon	IVF0014887.1-exon-chr04:31446607..31446686	exon
IVF0014887.1-exon	IVF0014887.1-exon-chr04:31447146..31447210	exon
IVF0014887.1-exon	IVF0014887.1-exon-chr04:31447845..31448034	exon
IVF0014887.1-exon	IVF0014887.1-exon-chr04:31448719..31448722	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
IVF0014887.1-cds	IVF0014887.1-cds-chr04:31444847..31445443	CDS
IVF0014887.1-cds	IVF0014887.1-cds-chr04:31445528..31445626	CDS
IVF0014887.1-cds	IVF0014887.1-cds-chr04:31446046..31446266	CDS
IVF0014887.1-cds	IVF0014887.1-cds-chr04:31446455..31446524	CDS
IVF0014887.1-cds	IVF0014887.1-cds-chr04:31446607..31446686	CDS
IVF0014887.1-cds	IVF0014887.1-cds-chr04:31447146..31447210	CDS
IVF0014887.1-cds	IVF0014887.1-cds-chr04:31447845..31448034	CDS
IVF0014887.1-cds	IVF0014887.1-cds-chr04:31448719..31448722	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
IVF0014887.1	IVF0014887.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0099402	plant organ development
cellular_component	GO:0031969	chloroplast membrane
cellular_component	GO:0016021	integral component of membrane