Pay0014874 (gene) Melon (Payzawat) v1

Overview


Name	Pay0014874
Type	gene
Organism	Cucumis melo L. var. inodorus cv. Payzawat (Melon (Payzawat) v1)
Description	TFIIS N-terminal domain-containing protein
Location	chr04: 28913508 .. 28917858 (-)
RNA-Seq Expression	Pay0014874
Synteny	Pay0014874

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GAGAGAGGGAAATTTATGATTATATATGGATTTAGGTGCCAAGAAAGAAAAAGAAAAGAAAAACAATAAAATAATTTGTGAAAATAATTGAAAGGGAAGGAGTTTTTGGGTTTTTGGTTATGTGTACTCCAAATTCTGTGCCCTTTTTGGAGCACCCAGTTTTGATTCTAATCTCTTTAAAAAATTTCTAGAGAGAGAGAGAAAACCAACCAAACAAACAACAAAAACCCATTTCCATTTCTAAATCCATTCTTCCATTGAAAAAGAAAAGAGAGATTGAATTGAAAGATTGAATTCTTTGTTCTTATTTTCTCTTCTCTTTCCTTTTTCTCTTCTCTTTCCATTTCCCATATTCCCGATATTTCTTCTCCACAGCAAATCCCGGAGCTTTTCCGGGATTGAAGAGAAGCAACCAAGTTAATTTCTCTGTTACTACTACCCCTTTTCAATTTTTTAGAACAATCCCACAAACCATAGCTTGGGTTTTGATCAATATCCTGTTTTGTTCTTGATCAGATCCTTAATTTTCATAAAAAGAAGGAACGAAATCGAGCACCAATACTTACTCTACACACATTAACCAACTCGTTTTTTGTGTTTAAACGGATGAAACTCCGACTGTTAATGGGTTTGTTGCTAACGATTTTTTCTGGGAATCGGATTCTTGTGGTGCTGGATTAGTGTTAGATAAGGCGGGCTTTTCTGTTTTGGGTGTTGGTTTCTTTCAAAACCCATCTTCAATCAACTGGGTTGAACCCCAATTGCTTGCGTTTTCTTCATATTTAGGTTTTTGTTTTCTCACGGCGATGGAATTCCCACTTCGATTCTGAGTATTTCGTTGGAATTTCATCTGGGTTTGATCAAAGGTTAGTTTCTCCAGATTCCGATCATGGCTGCCAAGTCTGGGTCCCTTGATTCCTGGAGGAATTACTTCCGGAATGCGAATTCGGATATTTTTGGTATTATCGATTACGCAATTTTGGTGGCGGCTTCCGATTGTCCTAAGGAGTTCAGGTTGAGGAGAGATCGAATTGCAGAGCAGTTGTTCTCTTGCCGATTGACTCGTTGTTTGGGCTGTGACCGAGTGGAGCTGGCGGTGGCCGGAGACATCGACGGAGGTGAAACGGGTTTCAAGAGCGATTTCGCCGGAGATGGGTGTGAGTTTGAGGCTGGTGGGAGCAAAGAGAGCAAGGTTTATAGTAGTAGAGATGATATAGGGGAGATGAATTGCAACCGGGTTAGTAATTTTAGCTTTGGTGAAGCTGAAGCATTGACTGATGAAATTGAGCAAGAATCTCAGATTGTAGGAGAGGTTTTGAGGATCAAAGAGATTCTTAATAATTTTGAAGATGAGGTAACGATTGCTTTAAATGTTTTCATTTTCGGGGATGTTTATTTGCCCCTCATGATGATCATTGTTCTGTTTGTTTGTGTTGTTGGCAGTCTGATTCGGTGTTGTTTGAATCACTTAGAAGACTTGAATTGATGGCTCTATCAGTTGATACTTTGCAGGTGATTTGAATTGTTCTGTTTGCTCTTGCATTTCTTGTGGGGACTTAGTTTTTGTTGATTGTTTTAGTTTCTAATGAAAATCTGGATTCAAGTCTTGAGGCTTTTTCTCCCTTTATCAGGCAACTGAGATTGGCAAAGCTGTTAATTGTCTTCGAAAGCATGGATCAAAGCGCATCCGCCATCTTGCTCGAGTTCTTATCATGTACTAAATCTTTCCTCCAAAGTTCATTAAGTATAGATGATATGTGATGAATGGTCCAAACTGAATTTTCTGTTGACTCTCTTTATGGCACCTTCAATATGCTTCCTTTCCTTTTTATTCTGTCCACATTTGTCTTCAAAGTTCTATACTCTGCAGGTGATTTGAATTATTCACTTTGCTCTTGCATTTCTTTATGGCACCTTCAAAGTTCTATAGATCTTTTGTCTGAGTTTTATGTATGGCTTGCTGCATAGGATCAACAACGAATAACCAATTCTGACCATCCCATGTCCATCATTTTGTTTATTGAGTGGATGAAGAGCTTTTCTAGCTCATCTGTATCTTTACAACTTGTTGCTTACTAGGAAAGTTCCCCATCTGCCATGCCCTATCTTCTGAACTTTCTCACCTTATAGAGAAATCCAGTCTTTGATAACGTTCATATTCATAATTCACTTAATGCAATTAGTAGATAAGGAAGATATCATTTTCAAGATTCTTGTTGCTGCTCATTGTTACTTTACTTTGTTTGAGAGTAAAAGATCTACTTTTTGAATTGCAGGGAGTGGAAAGACATGGTGGACGTGTGGGTACAAGCTACAGCTGCTGTTCAAGGTAGAGTTTGTTCACTACGCATTTCATCTATTATTTCATGCCATTTTTCAAGAGTTCTTTATTGAGAAATGCTTTTGTTTTCGTTGACAAAAAGGTGCAGAGGTCACACCGGATTCCAAAAGCAAGTCTGCTGCGGTAAAAGAAGAAGATGATTATGAAGAAGAAGGCCTTCCCTCGCCTCCTTTAGATGAAGCTGCATTTTTTACCACTCAGCCCACATCTATGGAGCTCTCACAAGTATGTCTCTATTTTCTTTTTGTATTCAGTTTTGTTATTCTGAAGCAAGTTACCTACTTCAAGCTGAATCAGTTCTAATCAACTGTATTTTACTTTCCGTTCCAATCCCTTCCTTGGTGAAGTTCTTTGATGGCATGGACGATGATGGAAGTGAGTTCATTATGCAATATTCTATGCCTTTCTCAATCACTTCCTATGTCTGCAGTTTTTACCATTTCTTAGATTCATGATTACAAATTGGGAACTCTGTTGTTTCAGATCCTCGAAATAGTGGGGACTTCGTCAAGTACCGCAATAATGTGAGAAAAACTTCAAATGGCAATCAAAACCCTACAAGGTGTAACCAACAAACCACTCGAGAGGTTAATGTGCTTTCTAAGGAAAATAAGACTCAAATGAAGGAACAAGTTGTGAAGCCAAATAATAAGCCATCCTCAAACACAAATTCTGGGCTTTTGAGGCAACAGAAGCTAAGCACAGAACAGAAGGACAACCATGAGAAGTTCCAGCGCAAATTGGAAAAACCTACAATCCCAAAGAGGAATCAGCAAGATGTAAGTACAAGAATATCCAGATCGTAACTTGTAAGTAATTTGGTTTGACATGTGCACTTTTACCTGATTTGTTTGATTTATGCTTACCAGAACTTCAAGTGCTCGGATGAGGTTGCAGTTCAAGTGAAGCTAGAAGCTACAAAAAGGAAACTCCAAGAGAGTTACCAACAAGCTGAAAACGGTATTTGTTTACTTTTCCATCCATGCTTTTATCAATTCTGATACCGATTTCATGAGCAATATAAAAGGTTTATTACTCAACAAAGTTTCAACGAATCCAAGCAACAATGGCTAAATATTTTCAAGTTTGACAATTTGGTTAGGACATTCAAATAAATGGTTTTTTAAATGCATTGCATAAAATTTGCTGACTATATTCTCAAAAGTTCTAAAAAATTCTGACTCATGGTGTTTATTCAACAGCCAAGAAGCAGCGTACAATACAGGTTATGGAATTACACGATCTTCCCAAGCAAGGAATTGGCCATAGAAATCCACACCTAAAATCTGGAGGCTTCAACCGGCATTGGACAAATGGGCGGCGTTAGGATCGTCAATGTAATAAGGTAGAAGACTAATGCTTCCAGCATTACTGTTTGAGTGACTTCCATCTAGAATCAGGTGGAAGATCATGATGCTAAAGCTCCCTGGCAAACAGTGTCTTGACCGACTTCGCTTGAAGGTAAACAACAAAAAACTTGGTTTCAGTCTGTCGTGCCAGAGAAGGCGATTCCGATCTCGAGGAGAGTTGGAACTAAAAAAAAAAAAAAGAAGCCATTTCCTTCTTAAGACAGGCAAGTATAGAGAATTCTAATTGGAATGTAGCCGAAAATAGTATAGCATTATCAGTAGGTTATCGAGTTTTGACTTGGTTATCTCTTACATAATGACTGTATAGAACCCCTCATTTGATATCCTCTTCACTTACTTCACTGACTACTTCTCTTATAGACATTTTCTTCCTTCTTTCTTACATGGAAGACTTATTCCTTCCATACTGTGAAATTAATGATAATGTAAGATAAATTGCACAACAACCAAGGTGCATTCCCATAAACAGTATAAAGTCATCTCTGTATACTTCTTCTTCTTCATATGAATGCGAATAATTGTTCTCACAATTTTTAGCTTTTGTTCTCAAGGAATGATGGCCAATGATTCATTCAAATGCTGTTCTTTTTGTTCTAAAGCTATTGGATTCCTTGAGTTTGGTTCATTTGAGCCTCTTGAT

mRNA sequence

GAGAGAGGGAAATTTATGATTATATATGGATTTAGGTGCCAAGAAAGAAAAAGAAAAGAAAAACAATAAAATAATTTGTGAAAATAATTGAAAGGGAAGGAGTTTTTGGGTTTTTGGTTATGTGTACTCCAAATTCTGTGCCCTTTTTGGAGCACCCAGTTTTGATTCTAATCTCTTTAAAAAATTTCTAGAGAGAGAGAGAAAACCAACCAAACAAACAACAAAAACCCATTTCCATTTCTAAATCCATTCTTCCATTGAAAAAGAAAAGAGAGATTGAATTGAAAGATTGAATTCTTTGTTCTTATTTTCTCTTCTCTTTCCTTTTTCTCTTCTCTTTCCATTTCCCATATTCCCGATATTTCTTCTCCACAGCAAATCCCGGAGCTTTTCCGGGATTGAAGAGAAGCAACCAAGTTAATTTCTCTGTTACTACTACCCCTTTTCAATTTTTTAGAACAATCCCACAAACCATAGCTTGGGTTTTGATCAATATCCTGTTTTGTTCTTGATCAGATCCTTAATTTTCATAAAAAGAAGGAACGAAATCGAGCACCAATACTTACTCTACACACATTAACCAACTCGTTTTTTGTGTTTAAACGGATGAAACTCCGACTGTTAATGGGTTTGTTGCTAACGATTTTTTCTGGGAATCGGATTCTTGTGGTGCTGGATTAGTGTTAGATAAGGCGGGCTTTTCTGTTTTGGGTGTTGGTTTCTTTCAAAACCCATCTTCAATCAACTGGGTTGAACCCCAATTGCTTGCGTTTTCTTCATATTTAGGTTTTTGTTTTCTCACGGCGATGGAATTCCCACTTCGATTCTGAGTATTTCGTTGGAATTTCATCTGGGTTTGATCAAAGGTTAGTTTCTCCAGATTCCGATCATGGCTGCCAAGTCTGGGTCCCTTGATTCCTGGAGGAATTACTTCCGGAATGCGAATTCGGATATTTTTGGTATTATCGATTACGCAATTTTGGTGGCGGCTTCCGATTGTCCTAAGGAGTTCAGGTTGAGGAGAGATCGAATTGCAGAGCAGTTGTTCTCTTGCCGATTGACTCGTTGTTTGGGCTGTGACCGAGTGGAGCTGGCGGTGGCCGGAGACATCGACGGAGGTGAAACGGGTTTCAAGAGCGATTTCGCCGGAGATGGGTGTGAGTTTGAGGCTGGTGGGAGCAAAGAGAGCAAGGTTTATAGTAGTAGAGATGATATAGGGGAGATGAATTGCAACCGGGTTAGTAATTTTAGCTTTGGTGAAGCTGAAGCATTGACTGATGAAATTGAGCAAGAATCTCAGATTGTAGGAGAGGTTTTGAGGATCAAAGAGATTCTTAATAATTTTGAAGATGAGTCTGATTCGGTGTTGTTTGAATCACTTAGAAGACTTGAATTGATGGCTCTATCAGTTGATACTTTGCAGGCAACTGAGATTGGCAAAGCTGTTAATTGTCTTCGAAAGCATGGATCAAAGCGCATCCGCCATCTTGCTCGAGTTCTTATCATGGAGTGGAAAGACATGGTGGACGTGTGGGTACAAGCTACAGCTGCTGTTCAAGGTGCAGAGGTCACACCGGATTCCAAAAGCAAGTCTGCTGCGGTAAAAGAAGAAGATGATTATGAAGAAGAAGGCCTTCCCTCGCCTCCTTTAGATGAAGCTGCATTTTTTACCACTCAGCCCACATCTATGGAGCTCTCACAATTCTTTGATGGCATGGACGATGATGGAAATCCTCGAAATAGTGGGGACTTCGTCAAGTACCGCAATAATGTGAGAAAAACTTCAAATGGCAATCAAAACCCTACAAGGTGTAACCAACAAACCACTCGAGAGGTTAATGTGCTTTCTAAGGAAAATAAGACTCAAATGAAGGAACAAGTTGTGAAGCCAAATAATAAGCCATCCTCAAACACAAATTCTGGGCTTTTGAGGCAACAGAAGCTAAGCACAGAACAGAAGGACAACCATGAGAAGTTCCAGCGCAAATTGGAAAAACCTACAATCCCAAAGAGGAATCAGCAAGATAACTTCAAGTGCTCGGATGAGGTTGCAGTTCAAGTGAAGCTAGAAGCTACAAAAAGGAAACTCCAAGAGAGTTACCAACAAGCTGAAAACGCCAAGAAGCAGCGTACAATACAGGTTATGGAATTACACGATCTTCCCAAGCAAGGAATTGGCCATAGAAATCCACACCTAAAATCTGGAGGCTTCAACCGGCATTGGACAAATGGGCGGCGTTAGGATCGTCAATGTAATAAGGTAGAAGACTAATGCTTCCAGCATTACTGTTTGAGTGACTTCCATCTAGAATCAGGTGGAAGATCATGATGCTAAAGCTCCCTGGCAAACAGTGTCTTGACCGACTTCGCTTGAAGGTAAACAACAAAAAACTTGGTTTCAGTCTGTCGTGCCAGAGAAGGCGATTCCGATCTCGAGGAGAGTTGGAACTAAAAAAAAAAAAAAGAAGCCATTTCCTTCTTAAGACAGGCAAGTATAGAGAATTCTAATTGGAATGTAGCCGAAAATAGTATAGCATTATCAGTAGGTTATCGAGTTTTGACTTGGTTATCTCTTACATAATGACTGTATAGAACCCCTCATTTGATATCCTCTTCACTTACTTCACTGACTACTTCTCTTATAGACATTTTCTTCCTTCTTTCTTACATGGAAGACTTATTCCTTCCATACTGTGAAATTAATGATAATGTAAGATAAATTGCACAACAACCAAGGTGCATTCCCATAAACAGTATAAAGTCATCTCTGTATACTTCTTCTTCTTCATATGAATGCGAATAATTGTTCTCACAATTTTTAGCTTTTGTTCTCAAGGAATGATGGCCAATGATTCATTCAAATGCTGTTCTTTTTGTTCTAAAGCTATTGGATTCCTTGAGTTTGGTTCATTTGAGCCTCTTGAT

Coding sequence (CDS)

ATGGCTGCCAAGTCTGGGTCCCTTGATTCCTGGAGGAATTACTTCCGGAATGCGAATTCGGATATTTTTGGTATTATCGATTACGCAATTTTGGTGGCGGCTTCCGATTGTCCTAAGGAGTTCAGGTTGAGGAGAGATCGAATTGCAGAGCAGTTGTTCTCTTGCCGATTGACTCGTTGTTTGGGCTGTGACCGAGTGGAGCTGGCGGTGGCCGGAGACATCGACGGAGGTGAAACGGGTTTCAAGAGCGATTTCGCCGGAGATGGGTGTGAGTTTGAGGCTGGTGGGAGCAAAGAGAGCAAGGTTTATAGTAGTAGAGATGATATAGGGGAGATGAATTGCAACCGGGTTAGTAATTTTAGCTTTGGTGAAGCTGAAGCATTGACTGATGAAATTGAGCAAGAATCTCAGATTGTAGGAGAGGTTTTGAGGATCAAAGAGATTCTTAATAATTTTGAAGATGAGTCTGATTCGGTGTTGTTTGAATCACTTAGAAGACTTGAATTGATGGCTCTATCAGTTGATACTTTGCAGGCAACTGAGATTGGCAAAGCTGTTAATTGTCTTCGAAAGCATGGATCAAAGCGCATCCGCCATCTTGCTCGAGTTCTTATCATGGAGTGGAAAGACATGGTGGACGTGTGGGTACAAGCTACAGCTGCTGTTCAAGGTGCAGAGGTCACACCGGATTCCAAAAGCAAGTCTGCTGCGGTAAAAGAAGAAGATGATTATGAAGAAGAAGGCCTTCCCTCGCCTCCTTTAGATGAAGCTGCATTTTTTACCACTCAGCCCACATCTATGGAGCTCTCACAATTCTTTGATGGCATGGACGATGATGGAAATCCTCGAAATAGTGGGGACTTCGTCAAGTACCGCAATAATGTGAGAAAAACTTCAAATGGCAATCAAAACCCTACAAGGTGTAACCAACAAACCACTCGAGAGGTTAATGTGCTTTCTAAGGAAAATAAGACTCAAATGAAGGAACAAGTTGTGAAGCCAAATAATAAGCCATCCTCAAACACAAATTCTGGGCTTTTGAGGCAACAGAAGCTAAGCACAGAACAGAAGGACAACCATGAGAAGTTCCAGCGCAAATTGGAAAAACCTACAATCCCAAAGAGGAATCAGCAAGATAACTTCAAGTGCTCGGATGAGGTTGCAGTTCAAGTGAAGCTAGAAGCTACAAAAAGGAAACTCCAAGAGAGTTACCAACAAGCTGAAAACGCCAAGAAGCAGCGTACAATACAGGTTATGGAATTACACGATCTTCCCAAGCAAGGAATTGGCCATAGAAATCCACACCTAAAATCTGGAGGCTTCAACCGGCATTGGACAAATGGGCGGCGTTAG

Protein sequence

MAAKSGSLDSWRNYFRNANSDIFGIIDYAILVAASDCPKEFRLRRDRIAEQLFSCRLTRCLGCDRVELAVAGDIDGGETGFKSDFAGDGCEFEAGGSKESKVYSSRDDIGEMNCNRVSNFSFGEAEALTDEIEQESQIVGEVLRIKEILNNFEDESDSVLFESLRRLELMALSVDTLQATEIGKAVNCLRKHGSKRIRHLARVLIMEWKDMVDVWVQATAAVQGAEVTPDSKSKSAAVKEEDDYEEEGLPSPPLDEAAFFTTQPTSMELSQFFDGMDDDGNPRNSGDFVKYRNNVRKTSNGNQNPTRCNQQTTREVNVLSKENKTQMKEQVVKPNNKPSSNTNSGLLRQQKLSTEQKDNHEKFQRKLEKPTIPKRNQQDNFKCSDEVAVQVKLEATKRKLQESYQQAENAKKQRTIQVMELHDLPKQGIGHRNPHLKSGGFNRHWTNGRR

Homology

[Close]

BLAST of Pay0014874 vs. ExPASy Swiss-Prot
Match: Q9FHK9 (Probable mediator of RNA polymerase II transcription subunit 26b OS=Arabidopsis thaliana OX=3702 GN=MED26B PE=2 SV=1)

HSP 1 Score: 326.2 bits (835), Expect = 5.6e-88
Identity = 229/466 (49.14%), Postives = 283/466 (60.73%), Query Frame = 0


Query: 5   SGSLDSWRNYF-RNANSDIFGIIDYAILVAASDCPKEFRLRRDRIAEQLFSCRLTRCLGC 64
           SGSLDSWR YF R  +SDIFGIID+AI+VAA+DCP +F+ RRD+IAE LFSCR+ RC+GC
Sbjct: 4   SGSLDSWREYFRRRGDSDIFGIIDHAIMVAATDCPNKFKSRRDKIAELLFSCRVNRCVGC 63

Query: 65  DRVELAVAGDIDG--GETGFKSDFAGDGCEFE-AGGSKESKVYSSRDDIGEMNCNRVSNF 124
           D +EL+V GD +   G TG          ++E AGGSKESK  SSR D    N   VSN+
Sbjct: 64  DHLELSVPGDDEANRGTTGNGGGGTAVDEDYEVAGGSKESKANSSRGD----NNQIVSNY 123

Query: 125 SFGEAEALTDEIEQESQIVGEVLRIKEILNNFEDESDSVLFESLRRLELMALSVDTLQAT 184
           +F EAEAL+DEIE+ S +  EV RIKEIL N EDE +SVL +SLR L+LM+L+VD L++T
Sbjct: 124 TFDEAEALSDEIEEFSVVSKEVARIKEILLNKEDEPNSVLLDSLRHLKLMSLNVDILKST 183

Query: 185 EIGKAVNCLRKHGSKRIRHLARVLIMEWKDMVDVWVQATAAVQGAEVTPDSKSKSAAVKE 244
           EIGKAVN LRKH S +IR LA+ LI EWK++VD WV  T  + GAE TP+S + S     
Sbjct: 184 EIGKAVNGLRKHSSDKIRQLAKTLIAEWKELVDQWVNTTKEITGAEGTPESANPSVL--- 243

Query: 245 EDDYEEEGLPSPPLDEAAFFTTQPTSMELSQFFDGMDDDGNPRNSGDFVKYRNNVRKTSN 304
               EEE  PS P D    FT +P   E+S FFD +D DGNPRNS +    R + R+  N
Sbjct: 244 ---DEEEAFPSLPYD-VDIFTPEPNGFEISHFFDSLDFDGNPRNSEEHNTSREHERRPQN 303

Query: 305 GNQNPTRCNQQTTREVNVLSKENKTQMKEQVVKPNN-KPSSNTN-SGLLRQQKLSTEQKD 364
             +                 K   TQM+ Q     + KPSS T+  G  R  K STEQ+ 
Sbjct: 304 IAKR----------------KPEGTQMRIQDAPFRSIKPSSATDFDGTRRPVKQSTEQRM 363

Query: 365 NHEKFQ-RKLEKPTIPKR------------NQQDNFKCSDEVAVQVKLEATKRKLQESYQ 424
            +E     K EKP I ++             QQ+  K  D      K E  KRKLQESYQ
Sbjct: 364 KNETVSVHKSEKPMIQRKPVVTEQKRKAPGPQQEKLKGLD---ADAKFEFAKRKLQESYQ 423

Query: 425 QAENAKKQRTIQVMELHDLPKQGIGHRNPHLKSGGF-NRHWTNGRR 451
             ENAKKQRTIQV+E+  +PKQG   + P LK  G  NR+W NGR+
Sbjct: 424 HHENAKKQRTIQVLEM--IPKQGSAQK-PQLKRPGMSNRNWANGRK 436

[Close]

BLAST of Pay0014874 vs. ExPASy Swiss-Prot
Match: F4J4Y5 (Probable mediator of RNA polymerase II transcription subunit 26a OS=Arabidopsis thaliana OX=3702 GN=MED26A PE=3 SV=1)

HSP 1 Score: 247.3 bits (630), Expect = 3.3e-64
Identity = 189/447 (42.28%), Postives = 249/447 (55.70%), Query Frame = 0


Query: 5   SGSLDSWRNYFRNANSDIFGIIDYAILVAASDCPKEFRLRRDRIAEQLFSCRLTRCLGCD 64
           S SLD+WR YFR  +SDIFGIID+AI+VAA+D PKEF+ R DRIAE LFSC+++RC+GCD
Sbjct: 7   SVSLDTWREYFRRGDSDIFGIIDHAIMVAAADWPKEFKSRSDRIAELLFSCKVSRCIGCD 66

Query: 65  RVELAVAGDIDGGETGFKSDFAGDGCEFEAGGSKESKVYSSRDDIGEMNCNRVSNFSFGE 124
            +EL++AGD    E        G G     GG +                        G+
Sbjct: 67  HLELSIAGDEAAVE------IVGVG----GGGDR------------------------GD 126

Query: 125 AEALTDEIEQESQIVGEVLRIKEILNNFEDESDSVLFESLRRLELMALSVDTLQATEIGK 184
           +   T E E+ S  V EV+RI++IL+N +DE DSVL ESLR+LE M++SVD L+ TEIGK
Sbjct: 127 SGVATGEGEEASVSVDEVMRIRDILSNKDDEKDSVLLESLRKLESMSMSVDILKDTEIGK 186

Query: 185 AVNCLRKHGSKRIRHLARVLIMEWKDMVDVWVQATAAVQGAEVTPDSKSKSAAVKEEDDY 244
           AVN LR+H S +I  LA+ L  EWK +VD W+     + G E TP+S + S         
Sbjct: 187 AVNGLRRHSSDKISKLAKTLFAEWKRLVDQWMNTPEEMAGTEGTPESLNLSVI------D 246

Query: 245 EEEGLPSPPLDEAAFFTTQPTSMELSQFFDGMDDDGNPRNSGDFVKYRNNVRKTSNGNQN 304
           EEE  PSPP D    +  +P   ELSQ  D +D DGNPR+S   V+ ++  +  S+  + 
Sbjct: 247 EEEAFPSPPHD-LDIYAPEPNGFELSQILDCLDCDGNPRHS---VESKHERKSQSSAGRR 306

Query: 305 PTRCNQQTTREVNVLSK---ENKTQMKEQVVKPNNKPSSNTNSGLLRQQKLSTEQKDNHE 364
           P     + T + NV+ +   + +T+ +E  V+P  K S+       RQ K S EQ  +  
Sbjct: 307 P-----KGTNDANVVGRYCNDQQTRREEADVRP-MKHSATDVVEPKRQTKQSREQMVS-- 366

Query: 365 KFQRKLEKPTIPKRN----QQDNFKCSDEVAVQVKLEATKRKLQESYQQAENAKKQRTIQ 424
             QRK    T  KR     QQD  K  D      K E  KRKLQESY Q ENAK+QRTIQ
Sbjct: 367 AIQRKPTAVTEQKRKLAGPQQDKLKALDP---DSKFEFAKRKLQESYHQHENAKRQRTIQ 395

Query: 425 VMELHDLPKQGIGHRNPHLKSGGFNRH 445
           V+E   +PKQ    + P LK     R+
Sbjct: 427 VLE--TIPKQN-KVQKPQLKRPATRRY 395

[Close]

BLAST of Pay0014874 vs. ExPASy Swiss-Prot
Match: F4KFC7 (Probable mediator of RNA polymerase II transcription subunit 26c OS=Arabidopsis thaliana OX=3702 GN=MED26C PE=1 SV=1)

HSP 1 Score: 110.5 bits (275), Expect = 4.9e-23
Identity = 123/447 (27.52%), Postives = 200/447 (44.74%), Query Frame = 0


Query: 8   LDSWRNYFRNANSDIFGIIDYAILVAASDCPKEFRLRRDRIAEQLFSCRL-TRCLGCD-- 67
           LD +R+   NA  D++  ID AILVA+ D  +E + RRD I E+L++  +  +C  CD  
Sbjct: 3   LDDFRSVMDNAGVDVWTFIDTAILVASLDYGQELKRRRDNIVERLYATSMANKCRNCDFG 62

Query: 68  ---RVELAVAGDIDGGETGFKSDFAGDGCEFEAGGSKESKVYSSRDDIGEMNCNRVSNFS 127
               V  A  G ++ G    +++             +E    ++ +++ E + N   +  
Sbjct: 63  GGGNVTEAAIGRVNNGRVHEETE----------EEDEEGVTAAAEEEVREKSVNVEDDDD 122

Query: 128 FGEAEALTDEIEQESQIVGEVLRIKEILNNFEDESDSVLFESLRRLELMALSVDTLQATE 187
           F     L D+ EQ+S     ++ IKE L +  D S+  L E L+ LE M ++   LQ T+
Sbjct: 123 FDPFAGLFDD-EQKS-----IVEIKEKLED-PDLSEESLVELLQNLEDMDITFQALQETD 182

Query: 188 IGKAVNCLRKHGSKRIRHLARVLIMEWKDMVDVWVQATAAVQGAEVTPDSKSKSAAVKEE 247
           IG+ VN +RKH S  +R LA+ L+ +WK+ VD WV+     Q  ++ P S      + +E
Sbjct: 183 IGRHVNRVRKHPSNNVRRLAKQLVKKWKETVDEWVKFN---QPGDLEPPS-----LIADE 242

Query: 248 DDYEEEGLPSPPLDEAAFFTTQPTSMELSQFFDGMDDDGNPRNSGDFVKYRNNVRKTSNG 307
           D   ++ L +    +   F   P                 P+N             +S+ 
Sbjct: 243 DSPVQKALHNGSRQQVPDFGYSPV----------------PQNG----------YSSSSK 302

Query: 308 NQNPTRCNQQTTREVNVLSKENKTQMKEQVVKPNNKPSSNTNSGLLRQQKLSTEQKDNHE 367
           N N T                 + + K + V P  +  S + +                 
Sbjct: 303 NSNIT-----------------EPERKPRPVAPQPRRESPSPA----------------- 353

Query: 368 KFQRKLEKPTIPKRNQQDNFKCSDEVAVQVKLEATKRKLQESYQQAENAKKQRTIQVMEL 427
                  KP+ P  +QQ   +  D+   +V  +  +++LQ++Y+QAENAKKQRTIQVM++
Sbjct: 363 -------KPSRPSPSQQTIPR--DKEHKEVDFDTARKRLQQNYRQAENAKKQRTIQVMDI 353

Query: 428 HDLPKQGIGHRNPHLKSGGFN---RHW 446
           HD+PK   G   P  + GG +   RHW
Sbjct: 423 HDIPKPKKGGFFP--RKGGSSQGGRHW 353

[Close]

BLAST of Pay0014874 vs. ExPASy TrEMBL
Match: A0A5A7UDQ2 (Putative mediator of RNA polymerase II transcription subunit 26b OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G006410 PE=4 SV=1)

HSP 1 Score: 864.0 bits (2231), Expect = 2.8e-247
Identity = 449/452 (99.34%), Postives = 449/452 (99.34%), Query Frame = 0


Query: 1   MAAKSGSLDSWRNYFRNANSDIFGIIDYAILVAASDCPKEFRLRRDRIAEQLFSCRLTRC 60
           MAAKSGSLDSWRNYFRNANSDIFGIIDYAILVAASDCPKEFRLRRDRIAEQLFSCRLTRC
Sbjct: 1   MAAKSGSLDSWRNYFRNANSDIFGIIDYAILVAASDCPKEFRLRRDRIAEQLFSCRLTRC 60

Query: 61  LGCDRVELAVAGDIDG--GETGFKSDFAGDGCEFEAGGSKESKVYSSRDDIGEMNCNRVS 120
           LGCDRVELAVAGDIDG  GETGFKSDFAGDGCEFEAGGSKESKVYSSRDDIGEMNCNRVS
Sbjct: 61  LGCDRVELAVAGDIDGDDGETGFKSDFAGDGCEFEAGGSKESKVYSSRDDIGEMNCNRVS 120

Query: 121 NFSFGEAEALTDEIEQESQIVGEVLRIKEILNNFEDESDSVLFESLRRLELMALSVDTLQ 180
           NFSFGEAEALTDEIEQESQIVGEVLRIKEILNNFEDESDSVLFESLRRLELMALSVDTLQ
Sbjct: 121 NFSFGEAEALTDEIEQESQIVGEVLRIKEILNNFEDESDSVLFESLRRLELMALSVDTLQ 180

Query: 181 ATEIGKAVNCLRKHGSKRIRHLARVLIMEWKDMVDVWVQATAAVQGAEVTPDSKSKSAAV 240
           ATEIGKAVNCLRKHGSKRIRHLARVLIMEWKDMVDVWVQATAAVQGAEVTPDSKSKSAAV
Sbjct: 181 ATEIGKAVNCLRKHGSKRIRHLARVLIMEWKDMVDVWVQATAAVQGAEVTPDSKSKSAAV 240

Query: 241 KEEDDYEEEGLPSPPLDEAAFFTTQPTSMELSQFFDGMDDDGNPRNSGDFVKYRNNVRKT 300
           KEEDDYEEEGLPSPPLDEAAFFTTQPTSMELSQFFDGMDDDGNPRNSGDFVK RNNVRKT
Sbjct: 241 KEEDDYEEEGLPSPPLDEAAFFTTQPTSMELSQFFDGMDDDGNPRNSGDFVKNRNNVRKT 300

Query: 301 SNGNQNPTRCNQQTTREVNVLSKENKTQMKEQVVKPNNKPSSNTNSGLLRQQKLSTEQKD 360
           SNGNQNPTRCNQQTTREVNVLSKENKTQMKEQVVKPNNKPSSNTNSGLLRQQKLSTEQKD
Sbjct: 301 SNGNQNPTRCNQQTTREVNVLSKENKTQMKEQVVKPNNKPSSNTNSGLLRQQKLSTEQKD 360

Query: 361 NHEKFQRKLEKPTIPKRNQQDNFKCSDEVAVQVKLEATKRKLQESYQQAENAKKQRTIQV 420
           NHEKFQRKLEKPTIPKRNQQDNFKCSDEVAVQVKLEATKRKLQESYQQAENAKKQRTIQV
Sbjct: 361 NHEKFQRKLEKPTIPKRNQQDNFKCSDEVAVQVKLEATKRKLQESYQQAENAKKQRTIQV 420

Query: 421 MELHDLPKQGIGHRNPHLKSGGFNRHWTNGRR 451
           MELHDLPKQGIGHRNPHLKSGGFNRHWTNGRR
Sbjct: 421 MELHDLPKQGIGHRNPHLKSGGFNRHWTNGRR 452

[Close]

BLAST of Pay0014874 vs. ExPASy TrEMBL
Match: A0A1S3B7K4 (probable mediator of RNA polymerase II transcription subunit 26b OS=Cucumis melo OX=3656 GN=LOC103486863 PE=4 SV=1)

HSP 1 Score: 864.0 bits (2231), Expect = 2.8e-247
Identity = 449/452 (99.34%), Postives = 449/452 (99.34%), Query Frame = 0


Query: 1   MAAKSGSLDSWRNYFRNANSDIFGIIDYAILVAASDCPKEFRLRRDRIAEQLFSCRLTRC 60
           MAAKSGSLDSWRNYFRNANSDIFGIIDYAILVAASDCPKEFRLRRDRIAEQLFSCRLTRC
Sbjct: 1   MAAKSGSLDSWRNYFRNANSDIFGIIDYAILVAASDCPKEFRLRRDRIAEQLFSCRLTRC 60

Query: 61  LGCDRVELAVAGDIDG--GETGFKSDFAGDGCEFEAGGSKESKVYSSRDDIGEMNCNRVS 120
           LGCDRVELAVAGDIDG  GETGFKSDFAGDGCEFEAGGSKESKVYSSRDDIGEMNCNRVS
Sbjct: 61  LGCDRVELAVAGDIDGDDGETGFKSDFAGDGCEFEAGGSKESKVYSSRDDIGEMNCNRVS 120

Query: 121 NFSFGEAEALTDEIEQESQIVGEVLRIKEILNNFEDESDSVLFESLRRLELMALSVDTLQ 180
           NFSFGEAEALTDEIEQESQIVGEVLRIKEILNNFEDESDSVLFESLRRLELMALSVDTLQ
Sbjct: 121 NFSFGEAEALTDEIEQESQIVGEVLRIKEILNNFEDESDSVLFESLRRLELMALSVDTLQ 180

Query: 181 ATEIGKAVNCLRKHGSKRIRHLARVLIMEWKDMVDVWVQATAAVQGAEVTPDSKSKSAAV 240
           ATEIGKAVNCLRKHGSKRIRHLARVLIMEWKDMVDVWVQATAAVQGAEVTPDSKSKSAAV
Sbjct: 181 ATEIGKAVNCLRKHGSKRIRHLARVLIMEWKDMVDVWVQATAAVQGAEVTPDSKSKSAAV 240

Query: 241 KEEDDYEEEGLPSPPLDEAAFFTTQPTSMELSQFFDGMDDDGNPRNSGDFVKYRNNVRKT 300
           KEEDDYEEEGLPSPPLDEAAFFTTQPTSMELSQFFDGMDDDGNPRNSGDFVK RNNVRKT
Sbjct: 241 KEEDDYEEEGLPSPPLDEAAFFTTQPTSMELSQFFDGMDDDGNPRNSGDFVKNRNNVRKT 300

Query: 301 SNGNQNPTRCNQQTTREVNVLSKENKTQMKEQVVKPNNKPSSNTNSGLLRQQKLSTEQKD 360
           SNGNQNPTRCNQQTTREVNVLSKENKTQMKEQVVKPNNKPSSNTNSGLLRQQKLSTEQKD
Sbjct: 301 SNGNQNPTRCNQQTTREVNVLSKENKTQMKEQVVKPNNKPSSNTNSGLLRQQKLSTEQKD 360

Query: 361 NHEKFQRKLEKPTIPKRNQQDNFKCSDEVAVQVKLEATKRKLQESYQQAENAKKQRTIQV 420
           NHEKFQRKLEKPTIPKRNQQDNFKCSDEVAVQVKLEATKRKLQESYQQAENAKKQRTIQV
Sbjct: 361 NHEKFQRKLEKPTIPKRNQQDNFKCSDEVAVQVKLEATKRKLQESYQQAENAKKQRTIQV 420

Query: 421 MELHDLPKQGIGHRNPHLKSGGFNRHWTNGRR 451
           MELHDLPKQGIGHRNPHLKSGGFNRHWTNGRR
Sbjct: 421 MELHDLPKQGIGHRNPHLKSGGFNRHWTNGRR 452

[Close]

BLAST of Pay0014874 vs. ExPASy TrEMBL
Match: A0A0A0LBK9 (TFIIS N-terminal domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G817210 PE=4 SV=1)

HSP 1 Score: 846.7 bits (2186), Expect = 4.6e-242
Identity = 440/452 (97.35%), Postives = 444/452 (98.23%), Query Frame = 0


Query: 1   MAAKSGSLDSWRNYFRNANSDIFGIIDYAILVAASDCPKEFRLRRDRIAEQLFSCRLTRC 60
           MAAKSGSLDSWRNYFRNANSDIFGIIDYAILVAASDCPKEFRLRRDRIAEQLFSCRLTRC
Sbjct: 1   MAAKSGSLDSWRNYFRNANSDIFGIIDYAILVAASDCPKEFRLRRDRIAEQLFSCRLTRC 60

Query: 61  LGCDRVELAVAGDIDG--GETGFKSDFAGDGCEFEAGGSKESKVYSSRDDIGEMNCNRVS 120
           LGCDRVELAVAGDIDG  GETGFKSDF  DGCEFEAGGSKESKVYSSRDDIGEMNCNRVS
Sbjct: 61  LGCDRVELAVAGDIDGDDGETGFKSDFVRDGCEFEAGGSKESKVYSSRDDIGEMNCNRVS 120

Query: 121 NFSFGEAEALTDEIEQESQIVGEVLRIKEILNNFEDESDSVLFESLRRLELMALSVDTLQ 180
           NFSFGEAEALTDEIEQESQIVGEVLRIKEILNNFEDESD VLFESLRRLELMALSVDTLQ
Sbjct: 121 NFSFGEAEALTDEIEQESQIVGEVLRIKEILNNFEDESDPVLFESLRRLELMALSVDTLQ 180

Query: 181 ATEIGKAVNCLRKHGSKRIRHLARVLIMEWKDMVDVWVQATAAVQGAEVTPDSKSKSAAV 240
           ATEIGKAVNCLRKHGSKRIRHLARVLIMEWK+MVD+WVQATAAVQGAEVTPDSK+KSAAV
Sbjct: 181 ATEIGKAVNCLRKHGSKRIRHLARVLIMEWKEMVDLWVQATAAVQGAEVTPDSKNKSAAV 240

Query: 241 KEEDDYEEEGLPSPPLDEAAFFTTQPTSMELSQFFDGMDDDGNPRNSGDFVKYRNNVRKT 300
           KEEDDYEEEGLPSPPLDEAAFFTTQPTSMELSQFFDGMDDDGNPRNSGDFVK RNNVRKT
Sbjct: 241 KEEDDYEEEGLPSPPLDEAAFFTTQPTSMELSQFFDGMDDDGNPRNSGDFVKNRNNVRKT 300

Query: 301 SNGNQNPTRCNQQTTREVNVLSKENKTQMKEQVVKPNNKPSSNTNSGLLRQQKLSTEQKD 360
           SNGNQNPTRCNQQTTREVNVLSKENKTQMKEQVVKPNNKPSSNTNSGLLR QKLSTEQKD
Sbjct: 301 SNGNQNPTRCNQQTTREVNVLSKENKTQMKEQVVKPNNKPSSNTNSGLLRAQKLSTEQKD 360

Query: 361 NHEKFQRKLEKPTIPKRNQQDNFKCSDEVAVQVKLEATKRKLQESYQQAENAKKQRTIQV 420
           NHEKFQRKLEKPTIPKRNQQDNFKCSDEVAVQVKLEATKRKLQESYQQAENAKKQRTIQV
Sbjct: 361 NHEKFQRKLEKPTIPKRNQQDNFKCSDEVAVQVKLEATKRKLQESYQQAENAKKQRTIQV 420

Query: 421 MELHDLPKQGIGHRNPHLKSGGFNRHWTNGRR 451
           MELHDLPKQGIGHRNPHLKSGGFNR+W NGRR
Sbjct: 421 MELHDLPKQGIGHRNPHLKSGGFNRNWANGRR 452

[Close]

BLAST of Pay0014874 vs. ExPASy TrEMBL
Match: A0A6J1FCK1 (probable mediator of RNA polymerase II transcription subunit 26b OS=Cucurbita moschata OX=3662 GN=LOC111442859 PE=4 SV=1)

HSP 1 Score: 731.1 bits (1886), Expect = 2.8e-207
Identity = 386/450 (85.78%), Postives = 413/450 (91.78%), Query Frame = 0


Query: 1   MAAKSGSLDSWRNYFRNANSDIFGIIDYAILVAASDCPKEFRLRRDRIAEQLFSCRLTRC 60
           M+AKSGSLD WR+YFRNANSDIF +IDYAILVAASDCPKEFRLRRDRIAEQLFSCRLTRC
Sbjct: 1   MSAKSGSLDYWRDYFRNANSDIFSLIDYAILVAASDCPKEFRLRRDRIAEQLFSCRLTRC 60

Query: 61  LGCDRVELAVAGDIDGGETGFKSDFAGDGCEFEAGGSKESKVYSSRDDIGEMNCNRVSNF 120
           LGCDRVELAVAGD+D GETGFKSD AGDG  FE GGSKESKVYSSRDD GEMN N+VSN+
Sbjct: 61  LGCDRVELAVAGDVD-GETGFKSDSAGDGRAFEGGGSKESKVYSSRDDGGEMNFNQVSNY 120

Query: 121 SFGEAEALTDEIEQESQIVGEVLRIKEILNNFEDESDSVLFESLRRLELMALSVDTLQAT 180
           SFGEAEALTDEIEQES+IVGEVLRIKEILNNFE+ESDSVLFESLRRLELMALSVD LQAT
Sbjct: 121 SFGEAEALTDEIEQESEIVGEVLRIKEILNNFEEESDSVLFESLRRLELMALSVDALQAT 180

Query: 181 EIGKAVNCLRKHGSKRIRHLARVLIMEWKDMVDVWVQATAAVQGAEVTPDSKSKSAAVKE 240
           EIGKAVN LRKHGSKRIRHL R LI EWK+MVD+WV+ATAAV G+EVTPDSKS   + +E
Sbjct: 181 EIGKAVNGLRKHGSKRIRHLVRFLITEWKEMVDMWVKATAAVHGSEVTPDSKSMPVSEQE 240

Query: 241 EDDYEEEGLPSPPLDEAAFFTTQPTSMELSQFFDGMDDDGNPRNSGDFVKYRNNVRKTSN 300
           EDDY E+GLPSPPLDEAAFFTTQPTSMELSQFFDGMDDDGNPRNSG+FVK R+N RKTS+
Sbjct: 241 EDDY-EDGLPSPPLDEAAFFTTQPTSMELSQFFDGMDDDGNPRNSGEFVKKRDNGRKTSS 300

Query: 301 GNQNPTRCNQQTTREVNVLSKENKTQMKEQVVKPNNKPSSNTNSGLLRQQKLSTEQKDNH 360
           G+QNP RC QQTTREVNV++K+NK+QMKEQVVKP NKP SN NSG  R QK ST QKDNH
Sbjct: 301 GSQNPMRCKQQTTREVNVVAKDNKSQMKEQVVKP-NKPPSNANSGFSRLQKPSTVQKDNH 360

Query: 361 EKFQRKLEKPTIPKRNQQDNFKCSDEVAVQVKLEATKRKLQESYQQAENAKKQRTIQVME 420
           EK QRK+EKPTIPKR+ QD FKCSDEVAVQVKLEATKRKLQESYQQAENAKKQRTIQVME
Sbjct: 361 EKLQRKVEKPTIPKRSLQDKFKCSDEVAVQVKLEATKRKLQESYQQAENAKKQRTIQVME 420

Query: 421 LHDLPKQGIGHRNPHLKSGGFNRHWTNGRR 451
           LHD+PKQG+GHRN HLKSGG NRHWTNGRR
Sbjct: 421 LHDIPKQGMGHRNVHLKSGGHNRHWTNGRR 447

[Close]

BLAST of Pay0014874 vs. ExPASy TrEMBL
Match: A0A6J1I7W1 (probable mediator of RNA polymerase II transcription subunit 26b OS=Cucurbita maxima OX=3661 GN=LOC111469992 PE=4 SV=1)

HSP 1 Score: 727.6 bits (1877), Expect = 3.1e-206
Identity = 389/456 (85.31%), Postives = 414/456 (90.79%), Query Frame = 0


Query: 1   MAAKSGSLDSWRNYFRNANSDIFGIIDYAILVAASDCPKEFRLRRDRIAEQLFSCRLTRC 60
           M+AKSGSLD WR+YFRNANSDIF +IDYAILVAASDCPKEFRLRRDRIAEQLFSCRLTRC
Sbjct: 1   MSAKSGSLDYWRDYFRNANSDIFSLIDYAILVAASDCPKEFRLRRDRIAEQLFSCRLTRC 60

Query: 61  LGCDRVELAVAGDIDGGETGFKSDFAGDGCEFEAGGSKESKVYSSRDDIGEMNCNRVSNF 120
           LGCDRVELAVAGD+D  ETGFKSD AGDG  FE GGSKESKVYSSRDD GEMN N+VSN+
Sbjct: 61  LGCDRVELAVAGDVD-CETGFKSDSAGDGRAFEGGGSKESKVYSSRDDGGEMNFNQVSNY 120

Query: 121 SFGEAEALTDEIEQESQIVGEVLRIKEILNNFEDESDSVLFESLRRLELMALSVDTLQAT 180
           SFGEAEALTDEIEQES+IVGEVLRIKEILNNFE+ESDSVLFESLRRLELMALSVD LQAT
Sbjct: 121 SFGEAEALTDEIEQESEIVGEVLRIKEILNNFEEESDSVLFESLRRLELMALSVDALQAT 180

Query: 181 EIGKAVNCLRKHGSKRIRHLARVLIMEWKDMVDVWVQATAAVQGAEVTPDSKSKSAAVKE 240
           EIGKAVN LRKHGSKRIRHL R LI EWK+MVD+WV+ATAAV G+EVTPDSKS  A+ +E
Sbjct: 181 EIGKAVNGLRKHGSKRIRHLVRFLITEWKEMVDLWVKATAAVHGSEVTPDSKSMPASEQE 240

Query: 241 EDDYEEEGLPSPPLDEAAFFTTQPTSMELSQFFDGMDDDGNPRNSGDFVKYRNNVRKTSN 300
           EDDY E+GLPSPPLDEAAFFTTQPTSMELSQFFDGMDDDGNPRNSG+FVK R+N RKTSN
Sbjct: 241 EDDY-EDGLPSPPLDEAAFFTTQPTSMELSQFFDGMDDDGNPRNSGEFVKERDNGRKTSN 300

Query: 301 GNQNPTRCNQQTTREVNVL------SKENKTQMKEQVVKPNNKPSSNTNSGLLRQQKLST 360
           G+QNP RC QQTTREVNV+      SK+NK+QMKEQVVKP NKP SN NSGL R QK ST
Sbjct: 301 GSQNPMRCKQQTTREVNVVAKDNRESKDNKSQMKEQVVKP-NKPPSNANSGLSRPQKPST 360

Query: 361 EQKDNHEKFQRKLEKPTIPKRNQQDNFKCSDEVAVQVKLEATKRKLQESYQQAENAKKQR 420
            QKDNHEK QRK+EKPTIPKR+ QD FKCSDEVAVQVKLEATKRKLQESYQQAENAKKQR
Sbjct: 361 VQKDNHEKLQRKVEKPTIPKRSLQDKFKCSDEVAVQVKLEATKRKLQESYQQAENAKKQR 420

Query: 421 TIQVMELHDLPKQGIGHRNPHLKSGGFNRHWTNGRR 451
           TIQVMELHD+PKQG+GHRN HLKSGG NRHWTNGRR
Sbjct: 421 TIQVMELHDIPKQGMGHRNVHLKSGGHNRHWTNGRR 453

[Close]

BLAST of Pay0014874 vs. NCBI nr
Match: XP_008443218.1 (PREDICTED: probable mediator of RNA polymerase II transcription subunit 26b [Cucumis melo] >KAA0053912.1 putative mediator of RNA polymerase II transcription subunit 26b [Cucumis melo var. makuwa] >TYK25493.1 putative mediator of RNA polymerase II transcription subunit 26b [Cucumis melo var. makuwa])

HSP 1 Score: 864.0 bits (2231), Expect = 5.7e-247
Identity = 449/452 (99.34%), Postives = 449/452 (99.34%), Query Frame = 0


Query: 1   MAAKSGSLDSWRNYFRNANSDIFGIIDYAILVAASDCPKEFRLRRDRIAEQLFSCRLTRC 60
           MAAKSGSLDSWRNYFRNANSDIFGIIDYAILVAASDCPKEFRLRRDRIAEQLFSCRLTRC
Sbjct: 1   MAAKSGSLDSWRNYFRNANSDIFGIIDYAILVAASDCPKEFRLRRDRIAEQLFSCRLTRC 60

Query: 61  LGCDRVELAVAGDIDG--GETGFKSDFAGDGCEFEAGGSKESKVYSSRDDIGEMNCNRVS 120
           LGCDRVELAVAGDIDG  GETGFKSDFAGDGCEFEAGGSKESKVYSSRDDIGEMNCNRVS
Sbjct: 61  LGCDRVELAVAGDIDGDDGETGFKSDFAGDGCEFEAGGSKESKVYSSRDDIGEMNCNRVS 120

Query: 121 NFSFGEAEALTDEIEQESQIVGEVLRIKEILNNFEDESDSVLFESLRRLELMALSVDTLQ 180
           NFSFGEAEALTDEIEQESQIVGEVLRIKEILNNFEDESDSVLFESLRRLELMALSVDTLQ
Sbjct: 121 NFSFGEAEALTDEIEQESQIVGEVLRIKEILNNFEDESDSVLFESLRRLELMALSVDTLQ 180

Query: 181 ATEIGKAVNCLRKHGSKRIRHLARVLIMEWKDMVDVWVQATAAVQGAEVTPDSKSKSAAV 240
           ATEIGKAVNCLRKHGSKRIRHLARVLIMEWKDMVDVWVQATAAVQGAEVTPDSKSKSAAV
Sbjct: 181 ATEIGKAVNCLRKHGSKRIRHLARVLIMEWKDMVDVWVQATAAVQGAEVTPDSKSKSAAV 240

Query: 241 KEEDDYEEEGLPSPPLDEAAFFTTQPTSMELSQFFDGMDDDGNPRNSGDFVKYRNNVRKT 300
           KEEDDYEEEGLPSPPLDEAAFFTTQPTSMELSQFFDGMDDDGNPRNSGDFVK RNNVRKT
Sbjct: 241 KEEDDYEEEGLPSPPLDEAAFFTTQPTSMELSQFFDGMDDDGNPRNSGDFVKNRNNVRKT 300

Query: 301 SNGNQNPTRCNQQTTREVNVLSKENKTQMKEQVVKPNNKPSSNTNSGLLRQQKLSTEQKD 360
           SNGNQNPTRCNQQTTREVNVLSKENKTQMKEQVVKPNNKPSSNTNSGLLRQQKLSTEQKD
Sbjct: 301 SNGNQNPTRCNQQTTREVNVLSKENKTQMKEQVVKPNNKPSSNTNSGLLRQQKLSTEQKD 360

Query: 361 NHEKFQRKLEKPTIPKRNQQDNFKCSDEVAVQVKLEATKRKLQESYQQAENAKKQRTIQV 420
           NHEKFQRKLEKPTIPKRNQQDNFKCSDEVAVQVKLEATKRKLQESYQQAENAKKQRTIQV
Sbjct: 361 NHEKFQRKLEKPTIPKRNQQDNFKCSDEVAVQVKLEATKRKLQESYQQAENAKKQRTIQV 420

Query: 421 MELHDLPKQGIGHRNPHLKSGGFNRHWTNGRR 451
           MELHDLPKQGIGHRNPHLKSGGFNRHWTNGRR
Sbjct: 421 MELHDLPKQGIGHRNPHLKSGGFNRHWTNGRR 452

[Close]

BLAST of Pay0014874 vs. NCBI nr
Match: XP_004136624.1 (probable mediator of RNA polymerase II transcription subunit 26b [Cucumis sativus] >KGN59410.1 hypothetical protein Csa_002527 [Cucumis sativus])

HSP 1 Score: 846.7 bits (2186), Expect = 9.5e-242
Identity = 440/452 (97.35%), Postives = 444/452 (98.23%), Query Frame = 0


Query: 1   MAAKSGSLDSWRNYFRNANSDIFGIIDYAILVAASDCPKEFRLRRDRIAEQLFSCRLTRC 60
           MAAKSGSLDSWRNYFRNANSDIFGIIDYAILVAASDCPKEFRLRRDRIAEQLFSCRLTRC
Sbjct: 1   MAAKSGSLDSWRNYFRNANSDIFGIIDYAILVAASDCPKEFRLRRDRIAEQLFSCRLTRC 60

Query: 61  LGCDRVELAVAGDIDG--GETGFKSDFAGDGCEFEAGGSKESKVYSSRDDIGEMNCNRVS 120
           LGCDRVELAVAGDIDG  GETGFKSDF  DGCEFEAGGSKESKVYSSRDDIGEMNCNRVS
Sbjct: 61  LGCDRVELAVAGDIDGDDGETGFKSDFVRDGCEFEAGGSKESKVYSSRDDIGEMNCNRVS 120

Query: 121 NFSFGEAEALTDEIEQESQIVGEVLRIKEILNNFEDESDSVLFESLRRLELMALSVDTLQ 180
           NFSFGEAEALTDEIEQESQIVGEVLRIKEILNNFEDESD VLFESLRRLELMALSVDTLQ
Sbjct: 121 NFSFGEAEALTDEIEQESQIVGEVLRIKEILNNFEDESDPVLFESLRRLELMALSVDTLQ 180

Query: 181 ATEIGKAVNCLRKHGSKRIRHLARVLIMEWKDMVDVWVQATAAVQGAEVTPDSKSKSAAV 240
           ATEIGKAVNCLRKHGSKRIRHLARVLIMEWK+MVD+WVQATAAVQGAEVTPDSK+KSAAV
Sbjct: 181 ATEIGKAVNCLRKHGSKRIRHLARVLIMEWKEMVDLWVQATAAVQGAEVTPDSKNKSAAV 240

Query: 241 KEEDDYEEEGLPSPPLDEAAFFTTQPTSMELSQFFDGMDDDGNPRNSGDFVKYRNNVRKT 300
           KEEDDYEEEGLPSPPLDEAAFFTTQPTSMELSQFFDGMDDDGNPRNSGDFVK RNNVRKT
Sbjct: 241 KEEDDYEEEGLPSPPLDEAAFFTTQPTSMELSQFFDGMDDDGNPRNSGDFVKNRNNVRKT 300

Query: 301 SNGNQNPTRCNQQTTREVNVLSKENKTQMKEQVVKPNNKPSSNTNSGLLRQQKLSTEQKD 360
           SNGNQNPTRCNQQTTREVNVLSKENKTQMKEQVVKPNNKPSSNTNSGLLR QKLSTEQKD
Sbjct: 301 SNGNQNPTRCNQQTTREVNVLSKENKTQMKEQVVKPNNKPSSNTNSGLLRAQKLSTEQKD 360

Query: 361 NHEKFQRKLEKPTIPKRNQQDNFKCSDEVAVQVKLEATKRKLQESYQQAENAKKQRTIQV 420
           NHEKFQRKLEKPTIPKRNQQDNFKCSDEVAVQVKLEATKRKLQESYQQAENAKKQRTIQV
Sbjct: 361 NHEKFQRKLEKPTIPKRNQQDNFKCSDEVAVQVKLEATKRKLQESYQQAENAKKQRTIQV 420

Query: 421 MELHDLPKQGIGHRNPHLKSGGFNRHWTNGRR 451
           MELHDLPKQGIGHRNPHLKSGGFNR+W NGRR
Sbjct: 421 MELHDLPKQGIGHRNPHLKSGGFNRNWANGRR 452

[Close]

BLAST of Pay0014874 vs. NCBI nr
Match: XP_038904902.1 (probable mediator of RNA polymerase II transcription subunit 26b isoform X1 [Benincasa hispida])

HSP 1 Score: 805.4 bits (2079), Expect = 2.4e-229
Identity = 424/453 (93.60%), Postives = 437/453 (96.47%), Query Frame = 0


Query: 1   MAAKSGSLDSWRNYFRNANSDIFGIIDYAILVAASDCPKEFRLRRDRIAEQLFSCRLTRC 60
           MAAKSGSLDSWRNYFRNANSDIFGIIDYAILVAASDCPKEFRLRRDRIAEQLFSCRLTRC
Sbjct: 1   MAAKSGSLDSWRNYFRNANSDIFGIIDYAILVAASDCPKEFRLRRDRIAEQLFSCRLTRC 60

Query: 61  LGCDRVELAVAGDIDG--GETGFKSDFAGDGCEFEAGGSKESKVYSSRDDIGEMNCNRVS 120
           LGCDRVELAVAGDIDG  GETGFKSDFAGDGCEFEAGGSKESKVYSSRDDIGEMNCNRVS
Sbjct: 61  LGCDRVELAVAGDIDGDDGETGFKSDFAGDGCEFEAGGSKESKVYSSRDDIGEMNCNRVS 120

Query: 121 NFSFGEAEALTDEIEQESQIVGEVLRIKEILNNFEDESDSVLFESLRRLELMALSVDTLQ 180
           NFSFGEAEALTDEIEQESQIVGEVLRIKEILNNFE+ESDSVLFESLRRLELMALSVDTLQ
Sbjct: 121 NFSFGEAEALTDEIEQESQIVGEVLRIKEILNNFEEESDSVLFESLRRLELMALSVDTLQ 180

Query: 181 ATEIGKAVNCLRKHGSKRIRHLARVLIMEWKDMVDVWVQATAAVQGAEVTPDSKSKSAAV 240
           ATEIGKAVN LRKHGSK IRHLARVLIMEWK+MVD WV+ATAAVQGAEVTPDSK+KSA+V
Sbjct: 181 ATEIGKAVNGLRKHGSKHIRHLARVLIMEWKEMVDEWVKATAAVQGAEVTPDSKNKSASV 240

Query: 241 KEEDDY-EEEGLPSPPLDEAAFFTTQPTSMELSQFFDGMDDDGNPRNSGDFVKYRNNVRK 300
           KEED+Y EEEGLPSPPLDEAAFFTTQPTSMELSQFFDGMDDDGNPRNSGDFVK RNNVRK
Sbjct: 241 KEEDNYEEEEGLPSPPLDEAAFFTTQPTSMELSQFFDGMDDDGNPRNSGDFVKNRNNVRK 300

Query: 301 TSNGNQNPTRCNQQTTREVNVLSKENKTQMKEQVVKPNNKPSSNTNSGLLRQQKLSTEQK 360
           TSNGNQNP R NQQT  EVNVL+KEN TQMKEQVVKP N+PSSNTNSGLLR QKLSTEQK
Sbjct: 301 TSNGNQNPVRSNQQTALEVNVLAKENMTQMKEQVVKP-NRPSSNTNSGLLRPQKLSTEQK 360

Query: 361 DNHEKFQRKLEKPTIPKRNQQDNFKCSDEVAVQVKLEATKRKLQESYQQAENAKKQRTIQ 420
           DNHEKFQRKL+KPTIPKRNQQ N+KCSDEVAVQVKLEATKRKLQESYQQAENAKKQRTIQ
Sbjct: 361 DNHEKFQRKLDKPTIPKRNQQVNYKCSDEVAVQVKLEATKRKLQESYQQAENAKKQRTIQ 420

Query: 421 VMELHDLPKQGIGHRNPHLKSGGFNRHWTNGRR 451
           VMELHDLPKQG+GHRNPHLKSGG+NR+W NGRR
Sbjct: 421 VMELHDLPKQGLGHRNPHLKSGGYNRNWANGRR 452

[Close]

BLAST of Pay0014874 vs. NCBI nr
Match: XP_038904903.1 (probable mediator of RNA polymerase II transcription subunit 26b isoform X2 [Benincasa hispida])

HSP 1 Score: 796.6 bits (2056), Expect = 1.1e-226
Identity = 422/453 (93.16%), Postives = 435/453 (96.03%), Query Frame = 0


Query: 1   MAAKSGSLDSWRNYFRNANSDIFGIIDYAILVAASDCPKEFRLRRDRIAEQLFSCRLTRC 60
           MAAKSGSLDSWRNYFRNANSDIFGIIDYAILVAASDCPKEFRLRRDRIAEQLFSCRLTRC
Sbjct: 1   MAAKSGSLDSWRNYFRNANSDIFGIIDYAILVAASDCPKEFRLRRDRIAEQLFSCRLTRC 60

Query: 61  LGCDRVELAVAGDIDG--GETGFKSDFAGDGCEFEAGGSKESKVYSSRDDIGEMNCNRVS 120
           LGCDRVELAVAGDIDG  GETGFKSDFAGDGCEFEAGGSKESKVYSSRDDIGEMNCNRVS
Sbjct: 61  LGCDRVELAVAGDIDGDDGETGFKSDFAGDGCEFEAGGSKESKVYSSRDDIGEMNCNRVS 120

Query: 121 NFSFGEAEALTDEIEQESQIVGEVLRIKEILNNFEDESDSVLFESLRRLELMALSVDTLQ 180
           NFSFGEAEALTDEIEQESQIVGEVLRIKEILNNFE+ESDSVLFESLRRLELMALSVDTLQ
Sbjct: 121 NFSFGEAEALTDEIEQESQIVGEVLRIKEILNNFEEESDSVLFESLRRLELMALSVDTLQ 180

Query: 181 ATEIGKAVNCLRKHGSKRIRHLARVLIMEWKDMVDVWVQATAAVQGAEVTPDSKSKSAAV 240
           ATEIGKAVN LRKHGSK IRHLARVLIMEWK+MVD WV+ATAAVQ  EVTPDSK+KSA+V
Sbjct: 181 ATEIGKAVNGLRKHGSKHIRHLARVLIMEWKEMVDEWVKATAAVQ--EVTPDSKNKSASV 240

Query: 241 KEEDDY-EEEGLPSPPLDEAAFFTTQPTSMELSQFFDGMDDDGNPRNSGDFVKYRNNVRK 300
           KEED+Y EEEGLPSPPLDEAAFFTTQPTSMELSQFFDGMDDDGNPRNSGDFVK RNNVRK
Sbjct: 241 KEEDNYEEEEGLPSPPLDEAAFFTTQPTSMELSQFFDGMDDDGNPRNSGDFVKNRNNVRK 300

Query: 301 TSNGNQNPTRCNQQTTREVNVLSKENKTQMKEQVVKPNNKPSSNTNSGLLRQQKLSTEQK 360
           TSNGNQNP R NQQT  EVNVL+KEN TQMKEQVVKP N+PSSNTNSGLLR QKLSTEQK
Sbjct: 301 TSNGNQNPVRSNQQTALEVNVLAKENMTQMKEQVVKP-NRPSSNTNSGLLRPQKLSTEQK 360

Query: 361 DNHEKFQRKLEKPTIPKRNQQDNFKCSDEVAVQVKLEATKRKLQESYQQAENAKKQRTIQ 420
           DNHEKFQRKL+KPTIPKRNQQ N+KCSDEVAVQVKLEATKRKLQESYQQAENAKKQRTIQ
Sbjct: 361 DNHEKFQRKLDKPTIPKRNQQVNYKCSDEVAVQVKLEATKRKLQESYQQAENAKKQRTIQ 420

Query: 421 VMELHDLPKQGIGHRNPHLKSGGFNRHWTNGRR 451
           VMELHDLPKQG+GHRNPHLKSGG+NR+W NGRR
Sbjct: 421 VMELHDLPKQGLGHRNPHLKSGGYNRNWANGRR 450

[Close]

BLAST of Pay0014874 vs. NCBI nr
Match: KAG6596180.1 (putative mediator of RNA polymerase II transcription subunit 26b, partial [Cucurbita argyrosperma subsp. sororia] >KAG7027717.1 putative mediator of RNA polymerase II transcription subunit 26b [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 731.5 bits (1887), Expect = 4.4e-207
Identity = 386/450 (85.78%), Postives = 414/450 (92.00%), Query Frame = 0


Query: 1   MAAKSGSLDSWRNYFRNANSDIFGIIDYAILVAASDCPKEFRLRRDRIAEQLFSCRLTRC 60
           M+AKSGSLD WR+YFRNANSDIF +IDYAILVAASDCPKEFRLRRDRIAEQLFSCRLTRC
Sbjct: 1   MSAKSGSLDYWRDYFRNANSDIFSLIDYAILVAASDCPKEFRLRRDRIAEQLFSCRLTRC 60

Query: 61  LGCDRVELAVAGDIDGGETGFKSDFAGDGCEFEAGGSKESKVYSSRDDIGEMNCNRVSNF 120
           LGCDRVELAVAGD+D GETGFKSD AGDG  FE GGSKESKVYSSRDD GEMN N+VSN+
Sbjct: 61  LGCDRVELAVAGDVD-GETGFKSDSAGDGRAFEGGGSKESKVYSSRDDGGEMNFNQVSNY 120

Query: 121 SFGEAEALTDEIEQESQIVGEVLRIKEILNNFEDESDSVLFESLRRLELMALSVDTLQAT 180
           SFGEAEALTDEIEQ+S+IVGEVLRIKEILNNFE+ESDSVLFESLRRLELMALSVD LQAT
Sbjct: 121 SFGEAEALTDEIEQQSEIVGEVLRIKEILNNFEEESDSVLFESLRRLELMALSVDALQAT 180

Query: 181 EIGKAVNCLRKHGSKRIRHLARVLIMEWKDMVDVWVQATAAVQGAEVTPDSKSKSAAVKE 240
           EIGKAVN LRKHGSKRIRHL R LI EWK+MVD+WV+ATAAV G+EVTPDSKS  A+ +E
Sbjct: 181 EIGKAVNGLRKHGSKRIRHLVRFLITEWKEMVDMWVKATAAVHGSEVTPDSKSMPASEQE 240

Query: 241 EDDYEEEGLPSPPLDEAAFFTTQPTSMELSQFFDGMDDDGNPRNSGDFVKYRNNVRKTSN 300
           EDDY E+GLPSPPLDEAAFFTTQPTSMELSQFFDGMDDDGNPRNSG+FVK R+N RKTS+
Sbjct: 241 EDDY-EDGLPSPPLDEAAFFTTQPTSMELSQFFDGMDDDGNPRNSGEFVKKRDNGRKTSS 300

Query: 301 GNQNPTRCNQQTTREVNVLSKENKTQMKEQVVKPNNKPSSNTNSGLLRQQKLSTEQKDNH 360
           G+QNP RC QQTTREVNV++K+NK+QMKEQVVKP NKP SN NSG  R QK ST QKDNH
Sbjct: 301 GSQNPMRCKQQTTREVNVVAKDNKSQMKEQVVKP-NKPPSNANSGFSRLQKPSTVQKDNH 360

Query: 361 EKFQRKLEKPTIPKRNQQDNFKCSDEVAVQVKLEATKRKLQESYQQAENAKKQRTIQVME 420
           EK QRK+EKPTIPKR+ QD FKCSDEVAVQVKLEATKRKLQESYQQAENAKKQRTIQVME
Sbjct: 361 EKLQRKVEKPTIPKRSLQDKFKCSDEVAVQVKLEATKRKLQESYQQAENAKKQRTIQVME 420

Query: 421 LHDLPKQGIGHRNPHLKSGGFNRHWTNGRR 451
           LHD+PKQG+GHRN HLKSGG NRHWTNGRR
Sbjct: 421 LHDIPKQGMGHRNVHLKSGGHNRHWTNGRR 447

[Close]

BLAST of Pay0014874 vs. TAIR 10
Match: AT5G05140.1 (Transcription elongation factor (TFIIS) family protein )

HSP 1 Score: 326.2 bits (835), Expect = 4.0e-89
Identity = 229/466 (49.14%), Postives = 283/466 (60.73%), Query Frame = 0


Query: 5   SGSLDSWRNYF-RNANSDIFGIIDYAILVAASDCPKEFRLRRDRIAEQLFSCRLTRCLGC 64
           SGSLDSWR YF R  +SDIFGIID+AI+VAA+DCP +F+ RRD+IAE LFSCR+ RC+GC
Sbjct: 4   SGSLDSWREYFRRRGDSDIFGIIDHAIMVAATDCPNKFKSRRDKIAELLFSCRVNRCVGC 63

Query: 65  DRVELAVAGDIDG--GETGFKSDFAGDGCEFE-AGGSKESKVYSSRDDIGEMNCNRVSNF 124
           D +EL+V GD +   G TG          ++E AGGSKESK  SSR D    N   VSN+
Sbjct: 64  DHLELSVPGDDEANRGTTGNGGGGTAVDEDYEVAGGSKESKANSSRGD----NNQIVSNY 123

Query: 125 SFGEAEALTDEIEQESQIVGEVLRIKEILNNFEDESDSVLFESLRRLELMALSVDTLQAT 184
           +F EAEAL+DEIE+ S +  EV RIKEIL N EDE +SVL +SLR L+LM+L+VD L++T
Sbjct: 124 TFDEAEALSDEIEEFSVVSKEVARIKEILLNKEDEPNSVLLDSLRHLKLMSLNVDILKST 183

Query: 185 EIGKAVNCLRKHGSKRIRHLARVLIMEWKDMVDVWVQATAAVQGAEVTPDSKSKSAAVKE 244
           EIGKAVN LRKH S +IR LA+ LI EWK++VD WV  T  + GAE TP+S + S     
Sbjct: 184 EIGKAVNGLRKHSSDKIRQLAKTLIAEWKELVDQWVNTTKEITGAEGTPESANPSVL--- 243

Query: 245 EDDYEEEGLPSPPLDEAAFFTTQPTSMELSQFFDGMDDDGNPRNSGDFVKYRNNVRKTSN 304
               EEE  PS P D    FT +P   E+S FFD +D DGNPRNS +    R + R+  N
Sbjct: 244 ---DEEEAFPSLPYD-VDIFTPEPNGFEISHFFDSLDFDGNPRNSEEHNTSREHERRPQN 303

Query: 305 GNQNPTRCNQQTTREVNVLSKENKTQMKEQVVKPNN-KPSSNTN-SGLLRQQKLSTEQKD 364
             +                 K   TQM+ Q     + KPSS T+  G  R  K STEQ+ 
Sbjct: 304 IAKR----------------KPEGTQMRIQDAPFRSIKPSSATDFDGTRRPVKQSTEQRM 363

Query: 365 NHEKFQ-RKLEKPTIPKR------------NQQDNFKCSDEVAVQVKLEATKRKLQESYQ 424
            +E     K EKP I ++             QQ+  K  D      K E  KRKLQESYQ
Sbjct: 364 KNETVSVHKSEKPMIQRKPVVTEQKRKAPGPQQEKLKGLD---ADAKFEFAKRKLQESYQ 423

Query: 425 QAENAKKQRTIQVMELHDLPKQGIGHRNPHLKSGGF-NRHWTNGRR 451
             ENAKKQRTIQV+E+  +PKQG   + P LK  G  NR+W NGR+
Sbjct: 424 HHENAKKQRTIQVLEM--IPKQGSAQK-PQLKRPGMSNRNWANGRK 436

[Close]

BLAST of Pay0014874 vs. TAIR 10
Match: AT3G10820.2 (Transcription elongation factor (TFIIS) family protein )

HSP 1 Score: 247.3 bits (630), Expect = 2.4e-65
Identity = 189/447 (42.28%), Postives = 249/447 (55.70%), Query Frame = 0


Query: 5   SGSLDSWRNYFRNANSDIFGIIDYAILVAASDCPKEFRLRRDRIAEQLFSCRLTRCLGCD 64
           S SLD+WR YFR  +SDIFGIID+AI+VAA+D PKEF+ R DRIAE LFSC+++RC+GCD
Sbjct: 7   SVSLDTWREYFRRGDSDIFGIIDHAIMVAAADWPKEFKSRSDRIAELLFSCKVSRCIGCD 66

Query: 65  RVELAVAGDIDGGETGFKSDFAGDGCEFEAGGSKESKVYSSRDDIGEMNCNRVSNFSFGE 124
            +EL++AGD    E        G G     GG +                        G+
Sbjct: 67  HLELSIAGDEAAVE------IVGVG----GGGDR------------------------GD 126

Query: 125 AEALTDEIEQESQIVGEVLRIKEILNNFEDESDSVLFESLRRLELMALSVDTLQATEIGK 184
           +   T E E+ S  V EV+RI++IL+N +DE DSVL ESLR+LE M++SVD L+ TEIGK
Sbjct: 127 SGVATGEGEEASVSVDEVMRIRDILSNKDDEKDSVLLESLRKLESMSMSVDILKDTEIGK 186

Query: 185 AVNCLRKHGSKRIRHLARVLIMEWKDMVDVWVQATAAVQGAEVTPDSKSKSAAVKEEDDY 244
           AVN LR+H S +I  LA+ L  EWK +VD W+     + G E TP+S + S         
Sbjct: 187 AVNGLRRHSSDKISKLAKTLFAEWKRLVDQWMNTPEEMAGTEGTPESLNLSVI------D 246

Query: 245 EEEGLPSPPLDEAAFFTTQPTSMELSQFFDGMDDDGNPRNSGDFVKYRNNVRKTSNGNQN 304
           EEE  PSPP D    +  +P   ELSQ  D +D DGNPR+S   V+ ++  +  S+  + 
Sbjct: 247 EEEAFPSPPHD-LDIYAPEPNGFELSQILDCLDCDGNPRHS---VESKHERKSQSSAGRR 306

Query: 305 PTRCNQQTTREVNVLSK---ENKTQMKEQVVKPNNKPSSNTNSGLLRQQKLSTEQKDNHE 364
           P     + T + NV+ +   + +T+ +E  V+P  K S+       RQ K S EQ  +  
Sbjct: 307 P-----KGTNDANVVGRYCNDQQTRREEADVRP-MKHSATDVVEPKRQTKQSREQMVS-- 366

Query: 365 KFQRKLEKPTIPKRN----QQDNFKCSDEVAVQVKLEATKRKLQESYQQAENAKKQRTIQ 424
             QRK    T  KR     QQD  K  D      K E  KRKLQESY Q ENAK+QRTIQ
Sbjct: 367 AIQRKPTAVTEQKRKLAGPQQDKLKALDP---DSKFEFAKRKLQESYHQHENAKRQRTIQ 395

Query: 425 VMELHDLPKQGIGHRNPHLKSGGFNRH 445
           V+E   +PKQ    + P LK     R+
Sbjct: 427 VLE--TIPKQN-KVQKPQLKRPATRRY 395

[Close]

BLAST of Pay0014874 vs. TAIR 10
Match: AT3G10820.1 (Transcription elongation factor (TFIIS) family protein )

HSP 1 Score: 202.6 bits (514), Expect = 6.7e-52
Identity = 123/267 (46.07%), Postives = 159/267 (59.55%), Query Frame = 0


Query: 5   SGSLDSWRNYFRNANSDIFGIIDYAILVAASDCPKEFRLRRDRIAEQLFSCRLTRCLGCD 64
           S SLD+WR YFR  +SDIFGIID+AI+VAA+D PKEF+ R DRIAE LFSC+++RC+GCD
Sbjct: 7   SVSLDTWREYFRRGDSDIFGIIDHAIMVAAADWPKEFKSRSDRIAELLFSCKVSRCIGCD 66

Query: 65  RVELAVAGDIDGGETGFKSDFAGDGCEFEAGGSKESKVYSSRDDIGEMNCNRVSNFSFGE 124
            +EL++AGD    E        G G     GG +                        G+
Sbjct: 67  HLELSIAGDEAAVE------IVGVG----GGGDR------------------------GD 126

Query: 125 AEALTDEIEQESQIVGEVLRIKEILNNFEDESDSVLFESLRRLELMALSVDTLQATEIGK 184
           +   T E E+ S  V EV+RI++IL+N +DE DSVL ESLR+LE M++SVD L+ TEIGK
Sbjct: 127 SGVATGEGEEASVSVDEVMRIRDILSNKDDEKDSVLLESLRKLESMSMSVDILKDTEIGK 186

Query: 185 AVNCLRKHGSKRIRHLARVLIMEWKDMVDVWVQATAAVQGAEVTPDSKSKSAAVKEEDDY 244
           AVN LR+H S +I  LA+ L  EWK +VD W+     + G E TP+S + S         
Sbjct: 187 AVNGLRRHSSDKISKLAKTLFAEWKRLVDQWMNTPEEMAGTEGTPESLNLSVI------D 232

Query: 245 EEEGLPSPPLDEAAFFTTQPTSMELSQ 272
           EEE  PSPP D    +  +P   ELSQ
Sbjct: 247 EEEAFPSPPHD-LDIYAPEPNGFELSQ 232

[Close]

BLAST of Pay0014874 vs. TAIR 10
Match: AT5G09850.1 (Transcription elongation factor (TFIIS) family protein )

HSP 1 Score: 110.5 bits (275), Expect = 3.5e-24
Identity = 123/447 (27.52%), Postives = 200/447 (44.74%), Query Frame = 0


Query: 8   LDSWRNYFRNANSDIFGIIDYAILVAASDCPKEFRLRRDRIAEQLFSCRL-TRCLGCD-- 67
           LD +R+   NA  D++  ID AILVA+ D  +E + RRD I E+L++  +  +C  CD  
Sbjct: 3   LDDFRSVMDNAGVDVWTFIDTAILVASLDYGQELKRRRDNIVERLYATSMANKCRNCDFG 62

Query: 68  ---RVELAVAGDIDGGETGFKSDFAGDGCEFEAGGSKESKVYSSRDDIGEMNCNRVSNFS 127
               V  A  G ++ G    +++             +E    ++ +++ E + N   +  
Sbjct: 63  GGGNVTEAAIGRVNNGRVHEETE----------EEDEEGVTAAAEEEVREKSVNVEDDDD 122

Query: 128 FGEAEALTDEIEQESQIVGEVLRIKEILNNFEDESDSVLFESLRRLELMALSVDTLQATE 187
           F     L D+ EQ+S     ++ IKE L +  D S+  L E L+ LE M ++   LQ T+
Sbjct: 123 FDPFAGLFDD-EQKS-----IVEIKEKLED-PDLSEESLVELLQNLEDMDITFQALQETD 182

Query: 188 IGKAVNCLRKHGSKRIRHLARVLIMEWKDMVDVWVQATAAVQGAEVTPDSKSKSAAVKEE 247
           IG+ VN +RKH S  +R LA+ L+ +WK+ VD WV+     Q  ++ P S      + +E
Sbjct: 183 IGRHVNRVRKHPSNNVRRLAKQLVKKWKETVDEWVKFN---QPGDLEPPS-----LIADE 242

Query: 248 DDYEEEGLPSPPLDEAAFFTTQPTSMELSQFFDGMDDDGNPRNSGDFVKYRNNVRKTSNG 307
           D   ++ L +    +   F   P                 P+N             +S+ 
Sbjct: 243 DSPVQKALHNGSRQQVPDFGYSPV----------------PQNG----------YSSSSK 302

Query: 308 NQNPTRCNQQTTREVNVLSKENKTQMKEQVVKPNNKPSSNTNSGLLRQQKLSTEQKDNHE 367
           N N T                 + + K + V P  +  S + +                 
Sbjct: 303 NSNIT-----------------EPERKPRPVAPQPRRESPSPA----------------- 353

Query: 368 KFQRKLEKPTIPKRNQQDNFKCSDEVAVQVKLEATKRKLQESYQQAENAKKQRTIQVMEL 427
                  KP+ P  +QQ   +  D+   +V  +  +++LQ++Y+QAENAKKQRTIQVM++
Sbjct: 363 -------KPSRPSPSQQTIPR--DKEHKEVDFDTARKRLQQNYRQAENAKKQRTIQVMDI 353

Query: 428 HDLPKQGIGHRNPHLKSGGFN---RHW 446
           HD+PK   G   P  + GG +   RHW
Sbjct: 423 HDIPKPKKGGFFP--RKGGSSQGGRHW 353

The following BLAST results are available for this feature:

BLAST of Pay0014874 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FHK9	5.6e-88	49.14	Probable mediator of RNA polymerase II transcription subunit 26b OS=Arabidopsis ...	[more]
F4J4Y5	3.3e-64	42.28	Probable mediator of RNA polymerase II transcription subunit 26a OS=Arabidopsis ...	[more]
F4KFC7	4.9e-23	27.52	Probable mediator of RNA polymerase II transcription subunit 26c OS=Arabidopsis ...	[more]

BLAST of Pay0014874 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7UDQ2	2.8e-247	99.34	Putative mediator of RNA polymerase II transcription subunit 26b OS=Cucumis melo...	[more]
A0A1S3B7K4	2.8e-247	99.34	probable mediator of RNA polymerase II transcription subunit 26b OS=Cucumis melo...	[more]
A0A0A0LBK9	4.6e-242	97.35	TFIIS N-terminal domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G8...	[more]
A0A6J1FCK1	2.8e-207	85.78	probable mediator of RNA polymerase II transcription subunit 26b OS=Cucurbita mo...	[more]
A0A6J1I7W1	3.1e-206	85.31	probable mediator of RNA polymerase II transcription subunit 26b OS=Cucurbita ma...	[more]

BLAST of Pay0014874 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008443218.1	5.7e-247	99.34	PREDICTED: probable mediator of RNA polymerase II transcription subunit 26b [Cuc...	[more]
XP_004136624.1	9.5e-242	97.35	probable mediator of RNA polymerase II transcription subunit 26b [Cucumis sativu...	[more]
XP_038904902.1	2.4e-229	93.60	probable mediator of RNA polymerase II transcription subunit 26b isoform X1 [Ben...	[more]
XP_038904903.1	1.1e-226	93.16	probable mediator of RNA polymerase II transcription subunit 26b isoform X2 [Ben...	[more]
KAG6596180.1	4.4e-207	85.78	putative mediator of RNA polymerase II transcription subunit 26b, partial [Cucur...	[more]

BLAST of Pay0014874 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G05140.1	4.0e-89	49.14	Transcription elongation factor (TFIIS) family protein	[more]
AT3G10820.2	2.4e-65	42.28	Transcription elongation factor (TFIIS) family protein	[more]
AT3G10820.1	6.7e-52	46.07	Transcription elongation factor (TFIIS) family protein	[more]
AT5G09850.1	3.5e-24	27.52	Transcription elongation factor (TFIIS) family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Payzawat) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 309..329
None	No IPR available	COILS	Coil	Coil	coord: 390..417
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 225..257
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 287..352
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 275..379
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 426..450
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 353..379
None	No IPR available	PANTHER	PTHR46554:SF2	MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 26A-RELATED	coord: 1..449
None	No IPR available	CDD	cd00183	TFIIS_I	coord: 141..213 e-value: 2.48828E-20 score: 82.7414
IPR003617	Transcription elongation factor, TFIIS/CRSP70, N-terminal, sub-type	SMART	SM00509	TFS2_5	coord: 139..214 e-value: 6.7E-16 score: 68.8
IPR035441	TFIIS/LEDGF domain superfamily	GENE3D	1.20.930.10	Conserved domain common to transcription factors TFIIS, elongin A, CRSP70	coord: 131..224 e-value: 2.7E-21 score: 77.1
IPR035441	TFIIS/LEDGF domain superfamily	SUPERFAMILY	47676	Conserved domain common to transcription factors TFIIS, elongin A, CRSP70	coord: 137..221
IPR017923	Transcription factor IIS, N-terminal	PFAM	PF08711	Med26	coord: 164..212 e-value: 9.3E-12 score: 44.8
IPR017923	Transcription factor IIS, N-terminal	PROSITE	PS51319	TFIIS_N	coord: 140..215 score: 20.947113
IPR044805	Mediator of RNA polymerase II transcription subunit 26a/b-like	PANTHER	PTHR46554	MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 26A-RELATED	coord: 1..449

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Pay0014874.1	Pay0014874.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005634	nucleus