PI0027631 (gene) Melon (PI 482460) v1

Overview


Name	PI0027631
Type	gene
Organism	Cucumis metuliferus (Melon (PI 482460) v1)
Description	Ty3-gypsy retrotransposon protein
Location	chr07: 6803048 .. 6804834 (-)
RNA-Seq Expression	PI0027631
Synteny	PI0027631

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGATGTCCAGAGGCAACACTTCCAAAGCTATAAGCGACATCGGTAAAAGGCCAAATACTCGCAGCCGCTCAAGGGAGGCCCAATCGTCTGAGGATATGCCACCCTTTGAGGTCGCACAGAATATTTGGGAAGAGTTGTCAAATCCACCAAAAAATGGAATTATAATAAAGGAAAATCCTGTGATTGATGAGCACGGTTCGTCCTCTGAACGCTCAAGTGAGGAGATGCCTCACCCAAATATAATGTCGGTTATGGTGACTGATGTAGATACAAGTGAAGATAGAATGGCAGAACTTGAAAAGAAGGTTAACATGCTCTTGAAGGCAGTTGAAGAAAGGGATTATGAGATTTCCCTAAAAAATCATATCGAAAGTCGTGATGCTGCTGAATCAAGTCACACATATACCATCAAGAATAAGGACAAAGGGAAGACAATTTTGCAAGAAAGTCAACCACAAAATTCGACCTCAATTGCATCGTTGTCTGTTCAACAGTTGTAGGATATGATAGCAAACTCCATCCGGACTCAATATGGTGGAACTGCTCAAACTTTCTTTTTGTATTCCAAGCCATATACGAAGAAGATCGACAATCTGAGAATGCCGAATGGCTACCAGCCACCCAAGTTTCAACAAATTGATGGAAAAGACAATCCAAAGCAACATGTTGCTCACTTTATCGAAACATGTGAAACTGCTGATGCGCAAAGAGATTTGTTGGTCAAACAGTTCGTCCGAACTCTCAAGGGAAATGCCTTCGACTGGTACACCGATCTTGAGCCTAAAACCATTCATAGTTGGGAGTAGCTTGAGAGAGACTTTCCCAACCGCTTCTATAGCACTCGGCGTATCGTTAGCATGATAGAGCTAACAGCCACCAAGCAGTGAAAGGGCGAGCCGGTCATTGACTATATTAATCGCTGGAGAGCATTAAGCCTTGACTACAAAGACAGATTAACTGAATTGTTAGCAATGGAAATGTGCACTCAAGGAATGCATTGAAGGCTCATGTACATCTTACAGGGAATAAAATCCTACACCTTTGAAGAGTTAGCAATTAGAGCTCATGATATGGAGTTAAGTATTGTTAATAGAGGAAACAATGACCTACTGATCCCAGAAGTGAGAAAAGAAAAGAAAGAAGTGAAGGGCACCCTGAAGGTATCAAAGGGTGCTACCAAAGAGGCTATGGTCGTTACTACGACCCCTTTAAAGTTTGTTTCTAAGGAGAAAAAGATTGAAAAACGCCAAGATGAAGGCGAAAAAGATGCCCAACATTGAAAGAGAGGCAAGAAAAAGTTTACCCTTTTCTAGACTCTGACTTACCTGATATGTTAGAGCAATTACTGGAAAAACAACTCATTCAACTTCCTGAATGTAAACGACCAGCAGAAATTGGGAAGGTAAATGATCCTAATTACTATAAATATCATCGAGTCATCAGCCACCCCGTAGAAAAATGCTTCGTGTTAAATGAGTTAATTTTGAAATTAGCTCTAGATAAAAAAATTGAACTAGATCTCGATGATGTGGCATAAACAAATCATGTTGCAGTAATGATTCATCTAGAGGGTCGATCATTTGCTACAGGGAGTCTAATCCAATTTGGATCTTTGGAGCCTGTTGTTATATATTCTTCATCGAAGGTCTTACAAAATAATGACATTCAAACTGTTTACTCAAAAGAAGAAGAAAAGCACGTGGAGGATGCTGATGAGGGATGGGCGCTAGTAATGCGTCGAAAGAAGCATAAACAAAATTTTTCTAAAAAAGAATCCCGTTTGTAG

mRNA sequence

ATGATGTCCAGAGGCAACACTTCCAAAGCTATAAGCGACATCGGTAAAAGGCCAAATACTCGCAGCCGCTCAAGGGAGGCCCAATCGTCTGAGGATATGCCACCCTTTGAGGTCGCACAGAATATTTGGGAAGAGTTGTCAAATCCACCAAAAAATGGAATTATAATAAAGGAAAATCCTGTGATTGATGAGCACGGTTCGTCCTCTGAACGCTCAAGTGAGGAGATGCCTCACCCAAATATAATGTCGGTTATGGTGACTGATGTAGATACAAGTGAAGATAGAATGGCAGAACTTGAAAAGAAGGTTAACATGCTCTTGAAGGCAGTTGAAGAAAGGGATTATGAGATTTCCCTAAAAAATCATATCGAAAGTCGTGATGCTGCTGAATCAAAGGGTCGATCATTTGCTACAGGGAGTCTAATCCAATTTGGATCTTTGGAGCCTGTTGTTATATATTCTTCATCGAAGGTCTTACAAAATAATGACATTCAAACTGTTTACTCAAAAGAAGAAGAAAAGCACGTGGAGGATGCTGATGAGGGATGGGCGCTAGTAATGCGTCGAAAGAAGCATAAACAAAATTTTTCTAAAAAAGAATCCCGTTTGTAG

Coding sequence (CDS)

ATGATGTCCAGAGGCAACACTTCCAAAGCTATAAGCGACATCGGTAAAAGGCCAAATACTCGCAGCCGCTCAAGGGAGGCCCAATCGTCTGAGGATATGCCACCCTTTGAGGTCGCACAGAATATTTGGGAAGAGTTGTCAAATCCACCAAAAAATGGAATTATAATAAAGGAAAATCCTGTGATTGATGAGCACGGTTCGTCCTCTGAACGCTCAAGTGAGGAGATGCCTCACCCAAATATAATGTCGGTTATGGTGACTGATGTAGATACAAGTGAAGATAGAATGGCAGAACTTGAAAAGAAGGTTAACATGCTCTTGAAGGCAGTTGAAGAAAGGGATTATGAGATTTCCCTAAAAAATCATATCGAAAGTCGTGATGCTGCTGAATCAAAGGGTCGATCATTTGCTACAGGGAGTCTAATCCAATTTGGATCTTTGGAGCCTGTTGTTATATATTCTTCATCGAAGGTCTTACAAAATAATGACATTCAAACTGTTTACTCAAAAGAAGAAGAAAAGCACGTGGAGGATGCTGATGAGGGATGGGCGCTAGTAATGCGTCGAAAGAAGCATAAACAAAATTTTTCTAAAAAAGAATCCCGTTTGTAG

Protein sequence

MMSRGNTSKAISDIGKRPNTRSRSREAQSSEDMPPFEVAQNIWEELSNPPKNGIIIKENPVIDEHGSSSERSSEEMPHPNIMSVMVTDVDTSEDRMAELEKKVNMLLKAVEERDYEISLKNHIESRDAAESKGRSFATGSLIQFGSLEPVVIYSSSKVLQNNDIQTVYSKEEEKHVEDADEGWALVMRRKKHKQNFSKKESRL

Homology

[Close]

BLAST of PI0027631 vs. ExPASy TrEMBL
Match: A0A5A7TZU9 (Ribonuclease H OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold498G00940 PE=4 SV=1)

HSP 1 Score: 213.0 bits (541), Expect = 1.2e-51
Identity = 110/132 (83.33%), Postives = 123/132 (93.18%), Query Frame = 0


Query: 1   MMSRGNTSKAISDIGKRPNTRSRSREAQSSEDMPPFEVAQNIWEELSNPPKNGIIIKENP 60
           M S+GNTSKA+SDIGKRPNTRSRSRE QSSEDMPPF+VA+NIWE++S PPK GI+IKENP
Sbjct: 1   MTSQGNTSKALSDIGKRPNTRSRSREIQSSEDMPPFDVAKNIWEQISKPPKGGIVIKENP 60

Query: 61  VIDEHGSSSERSSEEMPHPNIMSVMVTDVDTSEDRMAELEKKVNMLLKAVEERDYEIS-L 120
            +DEH S SERS+EE+P PNIMSVMVTDVDTSEDRMAELEKKVNML+KAVEERD+EI+ L
Sbjct: 61  AMDEHNSLSERSNEEVPQPNIMSVMVTDVDTSEDRMAELEKKVNMLMKAVEERDFEIALL 120

Query: 121 KNHIESRDAAES 132
           KNHIESRDAAES
Sbjct: 121 KNHIESRDAAES 132

[Close]

BLAST of PI0027631 vs. ExPASy TrEMBL
Match: A0A5A7TZU9 (Ribonuclease H OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold498G00940 PE=4 SV=1)

HSP 1 Score: 91.3 bits (225), Expect = 5.1e-15
Identity = 53/100 (53.00%), Postives = 69/100 (69.00%), Query Frame = 0


Query: 105 MLLKAVEERDYEISLKNHIESRDAA---ESKGRSFATGSLIQFGSLEPVVIYSSSKVLQN 164
           ++LK   ++  E+ L +  ++  AA   +S  R  A GSLIQFGSLEPVVIYSS + LQN
Sbjct: 495 LILKLALDKKIELELDDVAQTNHAAVIIQSDSRLSAIGSLIQFGSLEPVVIYSSPEDLQN 554

Query: 165 NDIQTVYSKEEEKHVEDADEGWALVMRRKKHKQNFSKKES 202
           ND +    KEEEK V++ +EGW LV RRKK KQ+FS+KES
Sbjct: 555 NDFRADGPKEEEKQVDNVEEGWTLVTRRKKRKQSFSQKES 594

HSP 2 Score: 212.6 bits (540), Expect = 1.5e-51
Identity = 110/132 (83.33%), Postives = 122/132 (92.42%), Query Frame = 0


Query: 1   MMSRGNTSKAISDIGKRPNTRSRSREAQSSEDMPPFEVAQNIWEELSNPPKNGIIIKENP 60
           M S+GNTSKA+SDIGKRPNTRSRSRE QSSEDMPPFEV +NIWE++S PPK GI+IKENP
Sbjct: 1   MTSQGNTSKALSDIGKRPNTRSRSREIQSSEDMPPFEVVKNIWEQISKPPKGGIVIKENP 60

Query: 61  VIDEHGSSSERSSEEMPHPNIMSVMVTDVDTSEDRMAELEKKVNMLLKAVEERDYEIS-L 120
            IDEH S SERS+EE+P PNIMSVMVTDVDTSEDRMAELEKKVNML+KAVEE+D+EI+ L
Sbjct: 61  AIDEHNSLSERSNEEVPQPNIMSVMVTDVDTSEDRMAELEKKVNMLMKAVEEKDFEIALL 120

Query: 121 KNHIESRDAAES 132
           KNHIESRDAAES
Sbjct: 121 KNHIESRDAAES 132

[Close]

BLAST of PI0027631 vs. ExPASy TrEMBL
Match: A0A5A7SKR0 (Ty3-gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold506G00170 PE=4 SV=1)

HSP 1 Score: 212.2 bits (539), Expect = 2.0e-51
Identity = 109/132 (82.58%), Postives = 122/132 (92.42%), Query Frame = 0


Query: 1   MMSRGNTSKAISDIGKRPNTRSRSREAQSSEDMPPFEVAQNIWEELSNPPKNGIIIKENP 60
           M S+GNTSKA+SDIGKRPNTRSRSRE QSSEDMPPF+VA+NIWE++S PPK GI+IKENP
Sbjct: 1   MTSQGNTSKALSDIGKRPNTRSRSREIQSSEDMPPFDVAKNIWEQISKPPKGGIVIKENP 60

Query: 61  VIDEHGSSSERSSEEMPHPNIMSVMVTDVDTSEDRMAELEKKVNMLLKAVEERDYEIS-L 120
            IDEH S SERS+EE+P PNIMS+MVTDVDTSEDRMAELEKKVNML+K VEERD+EI+ L
Sbjct: 61  AIDEHNSLSERSNEEVPQPNIMSIMVTDVDTSEDRMAELEKKVNMLMKVVEERDFEIALL 120

Query: 121 KNHIESRDAAES 132
           KNHIESRDAAES
Sbjct: 121 KNHIESRDAAES 132

[Close]

BLAST of PI0027631 vs. ExPASy TrEMBL
Match: A0A5A7SKR0 (Ty3-gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold506G00170 PE=4 SV=1)

HSP 1 Score: 91.7 bits (226), Expect = 3.9e-15
Identity = 53/100 (53.00%), Postives = 69/100 (69.00%), Query Frame = 0


Query: 105 MLLKAVEERDYEISLKNHIESRDAA---ESKGRSFATGSLIQFGSLEPVVIYSSSKVLQN 164
           ++LK   ++  E+ L +  ++  AA   +S  R  A GSLIQFGSLEPVVIYSS + LQN
Sbjct: 418 LILKLALDKKIELELDDVAQTNHAAVIIQSDSRLSAIGSLIQFGSLEPVVIYSSPEDLQN 477

Query: 165 NDIQTVYSKEEEKHVEDADEGWALVMRRKKHKQNFSKKES 202
           ND +T   KEEEK V++ +EGW LV  RKK KQ+FS+KES
Sbjct: 478 NDFRTDSPKEEEKQVDNVEEGWTLVTHRKKRKQSFSQKES 517

HSP 2 Score: 212.2 bits (539), Expect = 2.0e-51
Identity = 111/132 (84.09%), Postives = 122/132 (92.42%), Query Frame = 0


Query: 1   MMSRGNTSKAISDIGKRPNTRSRSREAQSSEDMPPFEVAQNIWEELSNPPKNGIIIKENP 60
           M S+GNTSKA+SDIGKRPNTRSRSRE QSSEDMP FEVA+NIWE++S PPK GI+IKENP
Sbjct: 1   MTSQGNTSKALSDIGKRPNTRSRSREIQSSEDMPSFEVAKNIWEQISKPPKGGIVIKENP 60

Query: 61  VIDEHGSSSERSSEEMPHPNIMSVMVTDVDTSEDRMAELEKKVNMLLKAVEERDYEIS-L 120
            IDEH S SERS+EE+P PNIMSVMVTDVDTSEDRMAELEKKVNML+KAVEERD+EI+ L
Sbjct: 61  AIDEHNSLSERSNEEVPQPNIMSVMVTDVDTSEDRMAELEKKVNMLMKAVEERDFEITLL 120

Query: 121 KNHIESRDAAES 132
           KNHIESRDAAES
Sbjct: 121 KNHIESRDAAES 132

[Close]

BLAST of PI0027631 vs. ExPASy TrEMBL
Match: A0A5D3BY32 (Retrotransposon protein putative ty3-gypsy sub-class OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1871G00100 PE=4 SV=1)

HSP 1 Score: 211.1 bits (536), Expect = 4.4e-51
Identity = 110/132 (83.33%), Postives = 122/132 (92.42%), Query Frame = 0


Query: 1   MMSRGNTSKAISDIGKRPNTRSRSREAQSSEDMPPFEVAQNIWEELSNPPKNGIIIKENP 60
           M S+GNTSKA+ DIGKRPNTRSRSRE QSSEDMPPFEVA+NIWE++S PPK+GIIIKENP
Sbjct: 1   MTSQGNTSKALGDIGKRPNTRSRSREIQSSEDMPPFEVAKNIWEQISKPPKDGIIIKENP 60

Query: 61  VIDEHGSSSERSSEEMPHPNIMSVMVTDVDTSEDRMAELEKKVNMLLKAVEERDYEIS-L 120
            IDEH S S+RS+EE P PNIMSVMVTDVDTSEDRMAELEKKVNML+KAVEERD+EI+ L
Sbjct: 61  AIDEHNSLSDRSNEEAPQPNIMSVMVTDVDTSEDRMAELEKKVNMLMKAVEERDFEIALL 120

Query: 121 KNHIESRDAAES 132
           KNHI+SRDAAES
Sbjct: 121 KNHIKSRDAAES 132

[Close]

BLAST of PI0027631 vs. NCBI nr
Match: KAA0047477.1 (uncharacterized protein E6C27_scaffold498G00940 [Cucumis melo var. makuwa])

HSP 1 Score: 213.0 bits (541), Expect = 2.4e-51
Identity = 110/132 (83.33%), Postives = 123/132 (93.18%), Query Frame = 0


Query: 1   MMSRGNTSKAISDIGKRPNTRSRSREAQSSEDMPPFEVAQNIWEELSNPPKNGIIIKENP 60
           M S+GNTSKA+SDIGKRPNTRSRSRE QSSEDMPPF+VA+NIWE++S PPK GI+IKENP
Sbjct: 1   MTSQGNTSKALSDIGKRPNTRSRSREIQSSEDMPPFDVAKNIWEQISKPPKGGIVIKENP 60

Query: 61  VIDEHGSSSERSSEEMPHPNIMSVMVTDVDTSEDRMAELEKKVNMLLKAVEERDYEIS-L 120
            +DEH S SERS+EE+P PNIMSVMVTDVDTSEDRMAELEKKVNML+KAVEERD+EI+ L
Sbjct: 61  AMDEHNSLSERSNEEVPQPNIMSVMVTDVDTSEDRMAELEKKVNMLMKAVEERDFEIALL 120

Query: 121 KNHIESRDAAES 132
           KNHIESRDAAES
Sbjct: 121 KNHIESRDAAES 132

[Close]

BLAST of PI0027631 vs. NCBI nr
Match: KAA0047477.1 (uncharacterized protein E6C27_scaffold498G00940 [Cucumis melo var. makuwa])

HSP 1 Score: 91.3 bits (225), Expect = 1.1e-14
Identity = 53/100 (53.00%), Postives = 69/100 (69.00%), Query Frame = 0


Query: 105 MLLKAVEERDYEISLKNHIESRDAA---ESKGRSFATGSLIQFGSLEPVVIYSSSKVLQN 164
           ++LK   ++  E+ L +  ++  AA   +S  R  A GSLIQFGSLEPVVIYSS + LQN
Sbjct: 495 LILKLALDKKIELELDDVAQTNHAAVIIQSDSRLSAIGSLIQFGSLEPVVIYSSPEDLQN 554

Query: 165 NDIQTVYSKEEEKHVEDADEGWALVMRRKKHKQNFSKKES 202
           ND +    KEEEK V++ +EGW LV RRKK KQ+FS+KES
Sbjct: 555 NDFRADGPKEEEKQVDNVEEGWTLVTRRKKRKQSFSQKES 594

HSP 2 Score: 212.6 bits (540), Expect = 3.1e-51
Identity = 110/132 (83.33%), Postives = 122/132 (92.42%), Query Frame = 0


Query: 1   MMSRGNTSKAISDIGKRPNTRSRSREAQSSEDMPPFEVAQNIWEELSNPPKNGIIIKENP 60
           M S+GNTSKA+SDIGKRPNTRSRSRE QSSEDMPPFEV +NIWE++S PPK GI+IKENP
Sbjct: 1   MTSQGNTSKALSDIGKRPNTRSRSREIQSSEDMPPFEVVKNIWEQISKPPKGGIVIKENP 60

Query: 61  VIDEHGSSSERSSEEMPHPNIMSVMVTDVDTSEDRMAELEKKVNMLLKAVEERDYEIS-L 120
            IDEH S SERS+EE+P PNIMSVMVTDVDTSEDRMAELEKKVNML+KAVEE+D+EI+ L
Sbjct: 61  AIDEHNSLSERSNEEVPQPNIMSVMVTDVDTSEDRMAELEKKVNMLMKAVEEKDFEIALL 120

Query: 121 KNHIESRDAAES 132
           KNHIESRDAAES
Sbjct: 121 KNHIESRDAAES 132

[Close]

BLAST of PI0027631 vs. NCBI nr
Match: KAA0031754.1 (ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 212.2 bits (539), Expect = 4.1e-51
Identity = 109/132 (82.58%), Postives = 122/132 (92.42%), Query Frame = 0


Query: 1   MMSRGNTSKAISDIGKRPNTRSRSREAQSSEDMPPFEVAQNIWEELSNPPKNGIIIKENP 60
           M S+GNTSKA+SDIGKRPNTRSRSRE QSSEDMPPF+VA+NIWE++S PPK GI+IKENP
Sbjct: 1   MTSQGNTSKALSDIGKRPNTRSRSREIQSSEDMPPFDVAKNIWEQISKPPKGGIVIKENP 60

Query: 61  VIDEHGSSSERSSEEMPHPNIMSVMVTDVDTSEDRMAELEKKVNMLLKAVEERDYEIS-L 120
            IDEH S SERS+EE+P PNIMS+MVTDVDTSEDRMAELEKKVNML+K VEERD+EI+ L
Sbjct: 61  AIDEHNSLSERSNEEVPQPNIMSIMVTDVDTSEDRMAELEKKVNMLMKVVEERDFEIALL 120

Query: 121 KNHIESRDAAES 132
           KNHIESRDAAES
Sbjct: 121 KNHIESRDAAES 132

[Close]

BLAST of PI0027631 vs. NCBI nr
Match: KAA0031754.1 (ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 91.7 bits (226), Expect = 8.0e-15
Identity = 53/100 (53.00%), Postives = 69/100 (69.00%), Query Frame = 0


Query: 105 MLLKAVEERDYEISLKNHIESRDAA---ESKGRSFATGSLIQFGSLEPVVIYSSSKVLQN 164
           ++LK   ++  E+ L +  ++  AA   +S  R  A GSLIQFGSLEPVVIYSS + LQN
Sbjct: 418 LILKLALDKKIELELDDVAQTNHAAVIIQSDSRLSAIGSLIQFGSLEPVVIYSSPEDLQN 477

Query: 165 NDIQTVYSKEEEKHVEDADEGWALVMRRKKHKQNFSKKES 202
           ND +T   KEEEK V++ +EGW LV  RKK KQ+FS+KES
Sbjct: 478 NDFRTDSPKEEEKQVDNVEEGWTLVTHRKKRKQSFSQKES 517

HSP 2 Score: 212.2 bits (539), Expect = 4.1e-51
Identity = 111/132 (84.09%), Postives = 122/132 (92.42%), Query Frame = 0


Query: 1   MMSRGNTSKAISDIGKRPNTRSRSREAQSSEDMPPFEVAQNIWEELSNPPKNGIIIKENP 60
           M S+GNTSKA+SDIGKRPNTRSRSRE QSSEDMP FEVA+NIWE++S PPK GI+IKENP
Sbjct: 1   MTSQGNTSKALSDIGKRPNTRSRSREIQSSEDMPSFEVAKNIWEQISKPPKGGIVIKENP 60

Query: 61  VIDEHGSSSERSSEEMPHPNIMSVMVTDVDTSEDRMAELEKKVNMLLKAVEERDYEIS-L 120
            IDEH S SERS+EE+P PNIMSVMVTDVDTSEDRMAELEKKVNML+KAVEERD+EI+ L
Sbjct: 61  AIDEHNSLSERSNEEVPQPNIMSVMVTDVDTSEDRMAELEKKVNMLMKAVEERDFEITLL 120

Query: 121 KNHIESRDAAES 132
           KNHIESRDAAES
Sbjct: 121 KNHIESRDAAES 132

[Close]

BLAST of PI0027631 vs. NCBI nr
Match: KAA0048375.1 (retrotransposon protein putative ty3-gypsy sub-class [Cucumis melo var. makuwa] >TYK04075.1 retrotransposon protein putative ty3-gypsy sub-class [Cucumis melo var. makuwa])

HSP 1 Score: 211.1 bits (536), Expect = 9.1e-51
Identity = 110/132 (83.33%), Postives = 122/132 (92.42%), Query Frame = 0


Query: 1   MMSRGNTSKAISDIGKRPNTRSRSREAQSSEDMPPFEVAQNIWEELSNPPKNGIIIKENP 60
           M S+GNTSKA+ DIGKRPNTRSRSRE QSSEDMPPFEVA+NIWE++S PPK+GIIIKENP
Sbjct: 1   MTSQGNTSKALGDIGKRPNTRSRSREIQSSEDMPPFEVAKNIWEQISKPPKDGIIIKENP 60

Query: 61  VIDEHGSSSERSSEEMPHPNIMSVMVTDVDTSEDRMAELEKKVNMLLKAVEERDYEIS-L 120
            IDEH S S+RS+EE P PNIMSVMVTDVDTSEDRMAELEKKVNML+KAVEERD+EI+ L
Sbjct: 61  AIDEHNSLSDRSNEEAPQPNIMSVMVTDVDTSEDRMAELEKKVNMLMKAVEERDFEIALL 120

Query: 121 KNHIESRDAAES 132
           KNHI+SRDAAES
Sbjct: 121 KNHIKSRDAAES 132

The following BLAST results are available for this feature:

BLAST of PI0027631 vs.


Match Name	E-value	Identity	Description

BLAST of PI0027631 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7TZU9	1.2e-51	83.33	Ribonuclease H OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold498G00940...	[more]
A0A5A7TZU9	5.1e-15	53.00	Ribonuclease H OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold498G00940...	[more]
A0A5A7SKR0	2.0e-51	82.58	Ty3-gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C2...	[more]
A0A5A7SKR0	3.9e-15	53.00	Ty3-gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C2...	[more]
A0A5D3BY32	4.4e-51	83.33	Retrotransposon protein putative ty3-gypsy sub-class OS=Cucumis melo var. makuwa...	[more]

BLAST of PI0027631 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0047477.1	2.4e-51	83.33	uncharacterized protein E6C27_scaffold498G00940 [Cucumis melo var. makuwa]	[more]
KAA0047477.1	1.1e-14	53.00	uncharacterized protein E6C27_scaffold498G00940 [Cucumis melo var. makuwa]	[more]
KAA0031754.1	4.1e-51	82.58	ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa]	[more]
KAA0031754.1	8.0e-15	53.00	ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa]	[more]
KAA0048375.1	9.1e-51	83.33	retrotransposon protein putative ty3-gypsy sub-class [Cucumis melo var. makuwa] ...	[more]

BLAST of PI0027631 vs. NCBI nr


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 89..109
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 16..30
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..15
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..38

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
PI0027631.1	PI0027631.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0071897	DNA biosynthetic process
biological_process	GO:0015074	DNA integration
biological_process	GO:0006310	DNA recombination
biological_process	GO:0090502	RNA phosphodiester bond hydrolysis, endonucleolytic
molecular_function	GO:0003887	DNA-directed DNA polymerase activity
molecular_function	GO:0003723	RNA binding
molecular_function	GO:0004523	RNA-DNA hybrid ribonuclease activity