Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTATTTGCTTTCAGTAGGACTTCTGGTTCTTCCGTTAACATGTCTGCCTCGGCTGGCCATCATGCTTCAGAAGTTTCTCCATCCTCGAGCTCTTTATGTAGATCCTAATGCTCTTATAGAAAGAGTTGTCTCTTATCCATCTGATGAGGATGATATTGCTATTGCTCAGTTGCTCCAACAGCCTCGTCGAACCCCTGCTCCTTCACCTCGTGTTGATCATTCTACTCATTTGCCCGAGATAGGTCCGAGTTTGTCCTCTGCCAATCTTGTTGTCTCTCGTACGACTATCGCTACGATCGCTCCTAATCATCCCCCTCGTCCACCGCCTTTCAAAGGTCAGAAGGTTGTCACCATTAAGGCTGGTCGTCGTAAGCTTCCTCTGAATGTTCCCTTTGCTCCCATTGATGGGATCTCCTTCCATTGTGAGGAGAATGTTCATAAATGGAAGTATGTGGTTCAACATCGAATTGCAAATGAGGTAAATATCTCCGATCAGCATTACTTCTGCTTGCCTATCATGGATCTTATTTTGTGAGCAGGTCTTATCAAAACAATGACTGTTGTGGGGGCTTTCTACCCAAATTTGATTTGCGAGTTTATTGTCAATCTACCCTCTGAGTTTGACGTTCCCATTTCTACCAAATACAGGAAGGTGTTTCTTAG
mRNA sequence
ATGTATTTGCTTTCAGTAGGACTTCTGGTTCTTCCGTTAACATGTCTGCCTCGGCTGGCCATCATGCTTCAGAAGTTTCTCCATCCTCGAGCTCTTTATGTAGATCCTAATGCTCTTATAGAAAGAGTTGTCTCTTATCCATCTGATGAGGATGATATTGCTATTGCTCAGTTGCTCCAACAGCCTCGTCGAACCCCTGCTCCTTCACCTCGTGTTGATCATTCTACTCATTTGCCCGAGATAGGTCCGAGTTTGTCCTCTGCCAATCTTGTTGTCTCTCGTACGACTATCGCTACGATCGCTCCTAATCATCCCCCTCGTCCACCGCCTTTCAAAGGTCAGAAGGTTGTCACCATTAAGGCTGGTCGTCGTAAGCTTCCTCTGAATGTTCCCTTTGCTCCCATTGATGGGATCTCCTTCCATTGTGAGGAGAATGTTCATAAATGGAAGTATGTGGTTCAACATCGAATTGCAAATGAGGAAGGTGTTTCTTAG
Coding sequence (CDS)
ATGTATTTGCTTTCAGTAGGACTTCTGGTTCTTCCGTTAACATGTCTGCCTCGGCTGGCCATCATGCTTCAGAAGTTTCTCCATCCTCGAGCTCTTTATGTAGATCCTAATGCTCTTATAGAAAGAGTTGTCTCTTATCCATCTGATGAGGATGATATTGCTATTGCTCAGTTGCTCCAACAGCCTCGTCGAACCCCTGCTCCTTCACCTCGTGTTGATCATTCTACTCATTTGCCCGAGATAGGTCCGAGTTTGTCCTCTGCCAATCTTGTTGTCTCTCGTACGACTATCGCTACGATCGCTCCTAATCATCCCCCTCGTCCACCGCCTTTCAAAGGTCAGAAGGTTGTCACCATTAAGGCTGGTCGTCGTAAGCTTCCTCTGAATGTTCCCTTTGCTCCCATTGATGGGATCTCCTTCCATTGTGAGGAGAATGTTCATAAATGGAAGTATGTGGTTCAACATCGAATTGCAAATGAGGAAGGTGTTTCTTAG
Protein sequence
MYLLSVGLLVLPLTCLPRLAIMLQKFLHPRALYVDPNALIERVVSYPSDEDDIAIAQLLQQPRRTPAPSPRVDHSTHLPEIGPSLSSANLVVSRTTIATIAPNHPPRPPPFKGQKVVTIKAGRRKLPLNVPFAPIDGISFHCEENVHKWKYVVQHRIANEEGVS
Homology
BLAST of PI0004441 vs. ExPASy TrEMBL
Match:
A0A1S3BUF5 (uncharacterized protein LOC103493408 OS=Cucumis melo OX=3656 GN=LOC103493408 PE=4 SV=1)
HSP 1 Score: 87.4 bits (215), Expect = 5.9e-14
Identity = 41/82 (50.00%), Postives = 55/82 (67.07%), Query Frame = 0
Query: 82 GPSLSSANLVVSRTTIATIAPNHPPRPPPFKGQKVVTIKAGRRKLPLNVPFAPIDGISFH 141
GPS SS ++ R ++ P H P +GQ+V++ K GRRK+PLNVP PIDG+SFH
Sbjct: 48 GPSDSSISMSPPRHVDSSSRPRH----SPVRGQRVISTKVGRRKIPLNVPHMPIDGVSFH 107
Query: 142 CEENVHKWKYVVQHRIANEEGV 164
EE H+WKYVV+ RIA+E +
Sbjct: 108 SEEGAHRWKYVVRCRIADEANI 125
BLAST of PI0004441 vs. ExPASy TrEMBL
Match:
A0A5D3BNR5 (Flocculation protein FLO11-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold420G00290 PE=4 SV=1)
HSP 1 Score: 87.0 bits (214), Expect = 7.8e-14
Identity = 42/82 (51.22%), Postives = 55/82 (67.07%), Query Frame = 0
Query: 82 GPSLSSANLVVSRTTIATIAPNHPPRPPPFKGQKVVTIKAGRRKLPLNVPFAPIDGISFH 141
GPS SS +S + + + PR P +GQ+V++ K GRRK+PLNVP PIDG+SFH
Sbjct: 104 GPSDSS----ISMSPPRHVGSSSRPRHSPVRGQRVISTKVGRRKIPLNVPHMPIDGVSFH 163
Query: 142 CEENVHKWKYVVQHRIANEEGV 164
EE HKWKYVV+ RIA+E +
Sbjct: 164 SEEGAHKWKYVVRCRIADEANI 181
BLAST of PI0004441 vs. ExPASy TrEMBL
Match:
A0A5D3DM88 (Flocculation protein FLO11-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold205G001760 PE=4 SV=1)
HSP 1 Score: 86.7 bits (213), Expect = 1.0e-13
Identity = 51/132 (38.64%), Postives = 72/132 (54.55%), Query Frame = 0
Query: 49 DEDDIAIAQLLQQPRRTPAPSPRVDHSTHLPEIGPS-------LSSANLVVSR------- 108
D DD A +++ A S ++ + PE PS L +++ S
Sbjct: 296 DSDDEDYAPRMEEKTEAEATSTSTENQSASPEKDPSDHQSTEELGESSIPRSTEGPSEFS 355
Query: 109 ---TTIATIAPNHPPRPPPFKGQKVVTIKAGRRKLPLNVPFAPIDGISFHCEENVHKWKY 164
+T+A +A + R PP KGQ+VV+ KAGRRK+P NV PIDG+SFH EE HKWKY
Sbjct: 356 TPVSTLAHVASSSGFRRPPTKGQRVVSTKAGRRKVPPNVSSIPIDGVSFHSEEGAHKWKY 415
BLAST of PI0004441 vs. ExPASy TrEMBL
Match:
A0A5D3DJ92 (Flocculation protein FLO11-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1607G00100 PE=4 SV=1)
HSP 1 Score: 85.5 bits (210), Expect = 2.3e-13
Identity = 42/82 (51.22%), Postives = 56/82 (68.29%), Query Frame = 0
Query: 82 GPSLSSANLVVSRTTIATIAPNHPPRPPPFKGQKVVTIKAGRRKLPLNVPFAPIDGISFH 141
GPS SS + +T+A +A + R PP KGQ+VV+ K GR+K+P NVP PIDG+SFH
Sbjct: 189 GPSESSTPV----STLAHVASSSGFRRPPTKGQRVVSTKTGRQKVPPNVPSVPIDGVSFH 248
Query: 142 CEENVHKWKYVVQHRIANEEGV 164
EE HKWKYVV+ +I +E +
Sbjct: 249 SEEEAHKWKYVVKRQIMDEANI 266
BLAST of PI0004441 vs. ExPASy TrEMBL
Match:
A0A1S3B3W7 (uncharacterized protein LOC103485731 OS=Cucumis melo OX=3656 GN=LOC103485731 PE=4 SV=1)
HSP 1 Score: 85.5 bits (210), Expect = 2.3e-13
Identity = 42/82 (51.22%), Postives = 56/82 (68.29%), Query Frame = 0
Query: 82 GPSLSSANLVVSRTTIATIAPNHPPRPPPFKGQKVVTIKAGRRKLPLNVPFAPIDGISFH 141
GPS SS + +T+A +A + R PP KGQ+VV+ K GR+K+P NVP PIDG+SFH
Sbjct: 175 GPSESSTPV----STLAHVASSSGFRRPPTKGQRVVSTKTGRQKVPPNVPSVPIDGVSFH 234
Query: 142 CEENVHKWKYVVQHRIANEEGV 164
EE HKWKYVV+ +I +E +
Sbjct: 235 SEEEAHKWKYVVKRQIMDEANI 252
BLAST of PI0004441 vs. NCBI nr
Match:
XP_008452349.1 (PREDICTED: uncharacterized protein LOC103493408 [Cucumis melo])
HSP 1 Score: 87.4 bits (215), Expect = 1.2e-13
Identity = 41/82 (50.00%), Postives = 55/82 (67.07%), Query Frame = 0
Query: 82 GPSLSSANLVVSRTTIATIAPNHPPRPPPFKGQKVVTIKAGRRKLPLNVPFAPIDGISFH 141
GPS SS ++ R ++ P H P +GQ+V++ K GRRK+PLNVP PIDG+SFH
Sbjct: 48 GPSDSSISMSPPRHVDSSSRPRH----SPVRGQRVISTKVGRRKIPLNVPHMPIDGVSFH 107
Query: 142 CEENVHKWKYVVQHRIANEEGV 164
EE H+WKYVV+ RIA+E +
Sbjct: 108 SEEGAHRWKYVVRCRIADEANI 125
BLAST of PI0004441 vs. NCBI nr
Match:
KAA0060525.1 (flocculation protein FLO11-like [Cucumis melo var. makuwa] >TYK00765.1 flocculation protein FLO11-like [Cucumis melo var. makuwa])
HSP 1 Score: 87.0 bits (214), Expect = 1.6e-13
Identity = 42/82 (51.22%), Postives = 55/82 (67.07%), Query Frame = 0
Query: 82 GPSLSSANLVVSRTTIATIAPNHPPRPPPFKGQKVVTIKAGRRKLPLNVPFAPIDGISFH 141
GPS SS +S + + + PR P +GQ+V++ K GRRK+PLNVP PIDG+SFH
Sbjct: 104 GPSDSS----ISMSPPRHVGSSSRPRHSPVRGQRVISTKVGRRKIPLNVPHMPIDGVSFH 163
Query: 142 CEENVHKWKYVVQHRIANEEGV 164
EE HKWKYVV+ RIA+E +
Sbjct: 164 SEEGAHKWKYVVRCRIADEANI 181
BLAST of PI0004441 vs. NCBI nr
Match:
KAA0041517.1 (flocculation protein FLO11-like [Cucumis melo var. makuwa] >TYK24390.1 flocculation protein FLO11-like [Cucumis melo var. makuwa])
HSP 1 Score: 86.7 bits (213), Expect = 2.1e-13
Identity = 51/132 (38.64%), Postives = 72/132 (54.55%), Query Frame = 0
Query: 49 DEDDIAIAQLLQQPRRTPAPSPRVDHSTHLPEIGPS-------LSSANLVVSR------- 108
D DD A +++ A S ++ + PE PS L +++ S
Sbjct: 296 DSDDEDYAPRMEEKTEAEATSTSTENQSASPEKDPSDHQSTEELGESSIPRSTEGPSEFS 355
Query: 109 ---TTIATIAPNHPPRPPPFKGQKVVTIKAGRRKLPLNVPFAPIDGISFHCEENVHKWKY 164
+T+A +A + R PP KGQ+VV+ KAGRRK+P NV PIDG+SFH EE HKWKY
Sbjct: 356 TPVSTLAHVASSSGFRRPPTKGQRVVSTKAGRRKVPPNVSSIPIDGVSFHSEEGAHKWKY 415
BLAST of PI0004441 vs. NCBI nr
Match:
XP_008441650.1 (PREDICTED: uncharacterized protein LOC103485731 [Cucumis melo])
HSP 1 Score: 85.5 bits (210), Expect = 4.7e-13
Identity = 42/82 (51.22%), Postives = 56/82 (68.29%), Query Frame = 0
Query: 82 GPSLSSANLVVSRTTIATIAPNHPPRPPPFKGQKVVTIKAGRRKLPLNVPFAPIDGISFH 141
GPS SS + +T+A +A + R PP KGQ+VV+ K GR+K+P NVP PIDG+SFH
Sbjct: 175 GPSESSTPV----STLAHVASSSGFRRPPTKGQRVVSTKTGRQKVPPNVPSVPIDGVSFH 234
Query: 142 CEENVHKWKYVVQHRIANEEGV 164
EE HKWKYVV+ +I +E +
Sbjct: 235 SEEEAHKWKYVVKRQIMDEANI 252
BLAST of PI0004441 vs. NCBI nr
Match:
KAA0058927.1 (flocculation protein FLO11-like [Cucumis melo var. makuwa] >TYK23704.1 flocculation protein FLO11-like [Cucumis melo var. makuwa])
HSP 1 Score: 85.5 bits (210), Expect = 4.7e-13
Identity = 42/82 (51.22%), Postives = 56/82 (68.29%), Query Frame = 0
Query: 82 GPSLSSANLVVSRTTIATIAPNHPPRPPPFKGQKVVTIKAGRRKLPLNVPFAPIDGISFH 141
GPS SS + +T+A +A + R PP KGQ+VV+ K GR+K+P NVP PIDG+SFH
Sbjct: 189 GPSESSTPV----STLAHVASSSGFRRPPTKGQRVVSTKTGRQKVPPNVPSVPIDGVSFH 248
Query: 142 CEENVHKWKYVVQHRIANEEGV 164
EE HKWKYVV+ +I +E +
Sbjct: 249 SEEEAHKWKYVVKRQIMDEANI 266
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A1S3BUF5 | 5.9e-14 | 50.00 | uncharacterized protein LOC103493408 OS=Cucumis melo OX=3656 GN=LOC103493408 PE=... | [more] |
A0A5D3BNR5 | 7.8e-14 | 51.22 | Flocculation protein FLO11-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_... | [more] |
A0A5D3DM88 | 1.0e-13 | 38.64 | Flocculation protein FLO11-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_... | [more] |
A0A5D3DJ92 | 2.3e-13 | 51.22 | Flocculation protein FLO11-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_... | [more] |
A0A1S3B3W7 | 2.3e-13 | 51.22 | uncharacterized protein LOC103485731 OS=Cucumis melo OX=3656 GN=LOC103485731 PE=... | [more] |
Match Name | E-value | Identity | Description | |
XP_008452349.1 | 1.2e-13 | 50.00 | PREDICTED: uncharacterized protein LOC103493408 [Cucumis melo] | [more] |
KAA0060525.1 | 1.6e-13 | 51.22 | flocculation protein FLO11-like [Cucumis melo var. makuwa] >TYK00765.1 flocculat... | [more] |
KAA0041517.1 | 2.1e-13 | 38.64 | flocculation protein FLO11-like [Cucumis melo var. makuwa] >TYK24390.1 flocculat... | [more] |
XP_008441650.1 | 4.7e-13 | 51.22 | PREDICTED: uncharacterized protein LOC103485731 [Cucumis melo] | [more] |
KAA0058927.1 | 4.7e-13 | 51.22 | flocculation protein FLO11-like [Cucumis melo var. makuwa] >TYK23704.1 flocculat... | [more] |
Match Name | E-value | Identity | Description | |