MS001842 (gene) Bitter gourd (TR) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGATGCCATTGATTCAGTCATCGATCCTCTCAGAGGCTTCGCCAAGGATAGCGTCCGTCTCGTCAAGAGATGCCACAAGCCTGATCGCCAAGGCATGTTTTACCTTCACCAATTCATGTTGAATTAATATAAACTATAAAGATTAGGAACTACATTGTCTATTCTGTTCTGTTTTGCGATCTGATTAATTGCGGCGCCGGTTTTGGCACAGAATTCACCAAAGTGGCGCTCCGTACCGCAATTGGTTTCGTCGTGATGGGATTTGTCGGTTTTTTCGTCAAGTTGATTTTCATTCCGATTAACAATATCATCGTTGGATCTGGA ATGGATGCCATTGATTCAGTCATCGATCCTCTCAGAGGCTTCGCCAAGGATAGCGTCCGTCTCGTCAAGAGATGCCACAAGCCTGATCGCCAAGGCATGTTTTACCTTCACCAATTCACCAAAGTGGCGCTCCGTACCGCAATTGGTTTCGTCGTGATGGGATTTGTCGGTTTTTTCGTCAAGTTGATTTTCATTCCGATTAACAATATCATCGTTGGATCTGGA ATGGATGCCATTGATTCAGTCATCGATCCTCTCAGAGGCTTCGCCAAGGATAGCGTCCGTCTCGTCAAGAGATGCCACAAGCCTGATCGCCAAGGCATGTTTTACCTTCACCAATTCACCAAAGTGGCGCTCCGTACCGCAATTGGTTTCGTCGTGATGGGATTTGTCGGTTTTTTCGTCAAGTTGATTTTCATTCCGATTAACAATATCATCGTTGGATCTGGA MDAIDSVIDPLRGFAKDSVRLVKRCHKPDRQGMFYLHQFTKVALRTAIGFVVMGFVGFFVKLIFIPINNIIVGSG Homology
BLAST of MS001842 vs. NCBI nr
Match: XP_022134627.1 (protein transport protein Sec61 subunit gamma-like [Momordica charantia]) HSP 1 Score: 129.4 bits (324), Expect = 1.3e-26 Identity = 68/75 (90.67%), Postives = 69/75 (92.00%), Query Frame = 0
BLAST of MS001842 vs. NCBI nr
Match: VAI56164.1 (unnamed protein product [Triticum turgidum subsp. durum]) HSP 1 Score: 125.9 bits (315), Expect = 1.4e-25 Identity = 64/77 (83.12%), Postives = 70/77 (90.91%), Query Frame = 0
BLAST of MS001842 vs. NCBI nr
Match: RWR80044.1 (protein transport protein Sec61 subunit gamma-like protein [Cinnamomum micranthum f. kanehirae]) HSP 1 Score: 125.2 bits (313), Expect = 2.4e-25 Identity = 64/75 (85.33%), Postives = 68/75 (90.67%), Query Frame = 0
BLAST of MS001842 vs. NCBI nr
Match: XP_008782072.1 (uncharacterized protein LOC103701688 [Phoenix dactylifera] >XP_008782074.1 uncharacterized protein LOC103701688 [Phoenix dactylifera] >XP_008782075.1 uncharacterized protein LOC103701688 [Phoenix dactylifera] >XP_026658273.1 uncharacterized protein LOC103701688 [Phoenix dactylifera] >XP_038984806.1 uncharacterized protein LOC103701688 [Phoenix dactylifera]) HSP 1 Score: 125.2 bits (313), Expect = 2.4e-25 Identity = 64/75 (85.33%), Postives = 68/75 (90.67%), Query Frame = 0
BLAST of MS001842 vs. NCBI nr
Match: VAI92799.1 (unnamed protein product [Triticum turgidum subsp. durum]) HSP 1 Score: 124.0 bits (310), Expect = 5.4e-25 Identity = 66/78 (84.62%), Postives = 70/78 (89.74%), Query Frame = 0
BLAST of MS001842 vs. ExPASy Swiss-Prot
Match: P38385 (Protein transport protein Sec61 subunit gamma OS=Oryza sativa subsp. japonica OX=39947 GN=Os02g0178400 PE=3 SV=1) HSP 1 Score: 122.1 bits (305), Expect = 2.7e-27 Identity = 63/75 (84.00%), Postives = 67/75 (89.33%), Query Frame = 0
BLAST of MS001842 vs. ExPASy Swiss-Prot
Match: P0DI74 (Protein transport protein Sec61 subunit gamma-1 OS=Arabidopsis thaliana OX=3702 GN=SEC61G1 PE=1 SV=1) HSP 1 Score: 119.8 bits (299), Expect = 1.3e-26 Identity = 61/74 (82.43%), Postives = 67/74 (90.54%), Query Frame = 0
BLAST of MS001842 vs. ExPASy Swiss-Prot
Match: P0DI75 (Protein transport protein Sec61 subunit gamma-2 OS=Arabidopsis thaliana OX=3702 GN=SEC61G2 PE=1 SV=1) HSP 1 Score: 119.8 bits (299), Expect = 1.3e-26 Identity = 61/74 (82.43%), Postives = 67/74 (90.54%), Query Frame = 0
BLAST of MS001842 vs. ExPASy Swiss-Prot
Match: Q9SMP2 (Protein transport protein Sec61 subunit gamma-3 OS=Arabidopsis thaliana OX=3702 GN=SEC61G3 PE=1 SV=1) HSP 1 Score: 114.4 bits (285), Expect = 5.6e-25 Identity = 59/74 (79.73%), Postives = 65/74 (87.84%), Query Frame = 0
BLAST of MS001842 vs. ExPASy Swiss-Prot
Match: Q7Z1B8 (Protein transport protein Sec61 subunit gamma OS=Gryllotalpa orientalis OX=213494 GN=SEC61G PE=3 SV=1) HSP 1 Score: 93.6 bits (231), Expect = 1.0e-18 Identity = 48/74 (64.86%), Postives = 57/74 (77.03%), Query Frame = 0
BLAST of MS001842 vs. ExPASy TrEMBL
Match: A0A6J1C046 (protein transport protein Sec61 subunit gamma-like OS=Momordica charantia OX=3673 GN=LOC111006851 PE=3 SV=1) HSP 1 Score: 129.4 bits (324), Expect = 6.2e-27 Identity = 68/75 (90.67%), Postives = 69/75 (92.00%), Query Frame = 0
BLAST of MS001842 vs. ExPASy TrEMBL
Match: A0A446W7V8 (Uncharacterized protein OS=Triticum turgidum subsp. durum OX=4567 GN=TRITD_6Bv1G066660 PE=3 SV=1) HSP 1 Score: 125.9 bits (315), Expect = 6.9e-26 Identity = 64/77 (83.12%), Postives = 70/77 (90.91%), Query Frame = 0
BLAST of MS001842 vs. ExPASy TrEMBL
Match: A0A3S5WGK6 (Protein transport protein Sec61 subunit gamma-like protein OS=Cinnamomum micranthum f. kanehirae OX=337451 GN=CKAN_00865500 PE=3 SV=1) HSP 1 Score: 125.2 bits (313), Expect = 1.2e-25 Identity = 64/75 (85.33%), Postives = 68/75 (90.67%), Query Frame = 0
BLAST of MS001842 vs. ExPASy TrEMBL
Match: A0A0A9J3J3 (Sec61 gamma subunit, putative OS=Arundo donax OX=35708 PE=3 SV=1) HSP 1 Score: 124.8 bits (312), Expect = 1.5e-25 Identity = 64/75 (85.33%), Postives = 68/75 (90.67%), Query Frame = 0
BLAST of MS001842 vs. ExPASy TrEMBL
Match: A0A446YWH6 (Uncharacterized protein OS=Triticum turgidum subsp. durum OX=4567 GN=TRITD_7Bv1G210650 PE=3 SV=1) HSP 1 Score: 124.0 bits (310), Expect = 2.6e-25 Identity = 66/78 (84.62%), Postives = 70/78 (89.74%), Query Frame = 0
BLAST of MS001842 vs. TAIR 10
Match: AT4G24920.1 (secE/sec61-gamma protein transport protein ) HSP 1 Score: 119.8 bits (299), Expect = 9.5e-28 Identity = 61/74 (82.43%), Postives = 67/74 (90.54%), Query Frame = 0
BLAST of MS001842 vs. TAIR 10
Match: AT5G50460.1 (secE/sec61-gamma protein transport protein ) HSP 1 Score: 119.8 bits (299), Expect = 9.5e-28 Identity = 61/74 (82.43%), Postives = 67/74 (90.54%), Query Frame = 0
BLAST of MS001842 vs. TAIR 10
Match: AT3G48570.1 (secE/sec61-gamma protein transport protein ) HSP 1 Score: 114.4 bits (285), Expect = 4.0e-26 Identity = 59/74 (79.73%), Postives = 65/74 (87.84%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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