MC10g1028 (gene) Bitter gourd (Dali-11) v1

Overview


Name	MC10g1028
Type	gene
Organism	Momordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Description	Unknown protein
Location	MC10: 9928013 .. 9929079 (-)
RNA-Seq Expression	MC10g1028
Synteny	MC10g1028

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAAAACTCGGCCACCTCCAGAATCTGCGCCCACGATCAGGAAGCGACGTCGTTTAGTTGTAGTTGGACTTCCTCCATGGACGATCTCATCATGTTTGACACTACAGCAGCAACAACATCAGACGACTACTACAATCGCGGGATCTTTTCTTCTTCTTCTTTTTCTTCTTTGAACAATTATTGTTCTCCGGAGGCCGATGGTGATCTTGATGACACTGCAACTTCTTCTCCTCATCCTTCCATTCCCGCGGTTCGCCTTTTTTAATTTCTCTTTTCCCTCTTCTCCTGGTCCCGCCATTGTTTCTTTTGAGTTTCTTTAAAAAAGAAAAAAGAAAATTGTTTTACGAGAATTTATTTTTTATTTTAAATATACAAAATTTTTGTCTCTTATTTATTTTTTAATATTTATTATGCATTTTATAAGTCTGAGAATCATAAAATAGTACTTTTCTTTGTGTTTTGAAAAAAAAATGAGATCGGAAACAATAAATTTGATTTTGTGGATTCTAAAATTTGTATACAATTTTGAAAACGTTTCCTAAACATAAGAAACGAGAAACAAAAGTATCAGATATCAATCGTTTATATCTTTTGAAAATTGAAAAACAATAAACAAGAAGCGGTCGGGAGAAAAATGTTAATTACCAAAGGGGTTCTTTATTTTCTTTAGTTACTTTTTTTAACTTGGTAATTTCGTTTTTTCTTTTGAGTCAGATGGGTGAGCTTAATAAAAAGCAAACGAATAAGAAGATGGATCAAATGATGATCACTGAAGCAAAGAAACACAAGGAGGTTTAATTTCTAATATACATTTACAGCTTGAAAATGTATATATGTTTGATCATTTAAGACATTATTCTGAGACATAATCTAACACATTTTTCTTTTTTTTGTTTTTGTTTTTTTTTTGTTTAGGGAAAAGGAAGTGAATGTGAAGAATGTGGGGAGATTGAAGATAGAATTGAAGTGGGTTTTGTAGGGAGGGATAATAAGAACTGCAGCACAGGACTTAAGCATATAGGCCTTTGTTTAGTTCCTGTCACCATGGTTGTCAATTATTTTGGT

mRNA sequence

ATGGAAAACTCGGCCACCTCCAGAATCTGCGCCCACGATCAGGAAGCGACGTCGTTTAGTTGTAGTTGGACTTCCTCCATGGACGATCTCATCATGTTTGACACTACAGCAGCAACAACATCAGACGACTACTACAATCGCGGGATCTTTTCTTCTTCTTCTTTTTCTTCTTTGAACAATTATTGTTCTCCGGAGGCCGATGGTGATCTTGATGACACTGCAACTTCTTCTCCTCATCCTTCCATTCCCGCGGGAAAAGGAAGTGAATGTGAAGAATGTGGGGAGATTGAAGATAGAATTGAAGTGGGTTTTGTAGGGAGGGATAATAAGAACTGCAGCACAGGACTTAAGCATATAGGCCTTTGTTTAGTTCCTGTCACCATGGTTGTCAATTATTTTGGT

Coding sequence (CDS)

ATGGAAAACTCGGCCACCTCCAGAATCTGCGCCCACGATCAGGAAGCGACGTCGTTTAGTTGTAGTTGGACTTCCTCCATGGACGATCTCATCATGTTTGACACTACAGCAGCAACAACATCAGACGACTACTACAATCGCGGGATCTTTTCTTCTTCTTCTTTTTCTTCTTTGAACAATTATTGTTCTCCGGAGGCCGATGGTGATCTTGATGACACTGCAACTTCTTCTCCTCATCCTTCCATTCCCGCGGGAAAAGGAAGTGAATGTGAAGAATGTGGGGAGATTGAAGATAGAATTGAAGTGGGTTTTGTAGGGAGGGATAATAAGAACTGCAGCACAGGACTTAAGCATATAGGCCTTTGTTTAGTTCCTGTCACCATGGTTGTCAATTATTTTGGT

Protein sequence

MENSATSRICAHDQEATSFSCSWTSSMDDLIMFDTTAATTSDDYYNRGIFSSSSFSSLNNYCSPEADGDLDDTATSSPHPSIPAGKGSECEECGEIEDRIEVGFVGRDNKNCSTGLKHIGLCLVPVTMVVNYFG

Homology

[Close]

BLAST of MC10g1028 vs. NCBI nr
Match: XP_022151000.1 (uncharacterized protein LOC111019020 [Momordica charantia])

HSP 1 Score: 257 bits (657), Expect = 7.96e-86
Identity = 134/160 (83.75%), Postives = 134/160 (83.75%), Query Frame = 0


Query: 1   MENSATSRICAHDQEATSFSCSWTSSMDDLIMFDTTAATTSDDYYNRGIFSSSSFSSLNN 60
           MENSATSRICAHDQEATSFSCSWTSSMDDLIMFDTTAATTSDDYYNRGIFSSSSFSSLNN
Sbjct: 1   MENSATSRICAHDQEATSFSCSWTSSMDDLIMFDTTAATTSDDYYNRGIFSSSSFSSLNN 60

Query: 61  YCSPEADGDLDDTATSSPHPSIPA--------------------------GKGSECEECG 120
           YCSPEADGDLDDTATSSPHPSIPA                          GKGSECEECG
Sbjct: 61  YCSPEADGDLDDTATSSPHPSIPAMGELNKKQTNKKMDQMMITEAKKHKEGKGSECEECG 120

Query: 121 EIEDRIEVGFVGRDNKNCSTGLKHIGLCLVPVTMVVNYFG 134
           EIEDRIEVGFVGRDNKNCSTGLKHIGLCLVPVTMVVNYFG
Sbjct: 121 EIEDRIEVGFVGRDNKNCSTGLKHIGLCLVPVTMVVNYFG 160

[Close]

BLAST of MC10g1028 vs. NCBI nr
Match: XP_022989755.1 (uncharacterized protein LOC111486825 [Cucurbita maxima])

HSP 1 Score: 126 bits (316), Expect = 3.83e-34
Identity = 81/159 (50.94%), Postives = 94/159 (59.12%), Query Frame = 0


Query: 1   MENSATSRICAHDQEATSFSCSWTSSMDDLIMFDTTAATTSDDYYNRGIFSSSSFSSLNN 60
           MENSA S+IC   Q     S SWTSSMDDL++FD  + TTS  + N  +FSSS       
Sbjct: 1   MENSAISKICTQKQVDQDHS-SWTSSMDDLLLFDY-SKTTSYHFQNAAVFSSS------- 60

Query: 61  YCSPEADGDLDDTATSSPHPSIPAG-------------------------KGSECEECGE 120
               + D DL DTATS PHPSI +                          +G E EE GE
Sbjct: 61  ----DDDDDLQDTATSPPHPSIISDMDGLSSKQKKQQQQQHTAMINQTKHRGKEIEEFGE 120

Query: 121 IEDRIEVGFVGRDNKNCSTGLKHIGLCLVPVTMVVNYFG 134
           +EDRIEVGFVGRDN NCSTGLK+IGLCLVPV+M +NYFG
Sbjct: 121 VEDRIEVGFVGRDN-NCSTGLKNIGLCLVPVSMAINYFG 145

[Close]

BLAST of MC10g1028 vs. NCBI nr
Match: XP_022941575.1 (uncharacterized protein LOC111446888 [Cucurbita moschata])

HSP 1 Score: 125 bits (313), Expect = 1.09e-33
Identity = 82/160 (51.25%), Postives = 92/160 (57.50%), Query Frame = 0


Query: 1   MENSATSRICAHDQEATSFSCSWTSSMDDLIMFDTTAATTSDDYYNRGIFSSSSFSSLNN 60
           MENSA SRIC   Q     S SWTSSMDDL++FD  + T S  + N  +FSSS       
Sbjct: 1   MENSAISRICTQKQVDQDHS-SWTSSMDDLLLFDH-SKTISYHFQNAAVFSSSD------ 60

Query: 61  YCSPEADGDLDDTATSSPHPSIPAG--------------------------KGSECEECG 120
                 D DL DTATS PHPSI +                           KG E EE G
Sbjct: 61  ------DDDLQDTATSPPHPSIISDMDGLSSKQKKQLQQQQLSAMINQTKHKGKEIEEFG 120

Query: 121 EIEDRIEVGFVGRDNKNCSTGLKHIGLCLVPVTMVVNYFG 134
           E+EDRIEVGFVGRDN NCSTGLK+IGLCLVPV+M +NYFG
Sbjct: 121 EVEDRIEVGFVGRDN-NCSTGLKNIGLCLVPVSMAINYFG 145

[Close]

BLAST of MC10g1028 vs. NCBI nr
Match: KAG7031402.1 (hypothetical protein SDJN02_05442, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 123 bits (309), Expect = 4.41e-33
Identity = 82/160 (51.25%), Postives = 91/160 (56.88%), Query Frame = 0


Query: 1   MENSATSRICAHDQEATSFSCSWTSSMDDLIMFDTTAATTSDDYYNRGIFSSSSFSSLNN 60
           MENSA SRIC   Q     S SWTSSMDDL++FD  + T S    N  +FSSS       
Sbjct: 1   MENSAISRICTQKQVDEDHS-SWTSSMDDLLLFDH-SKTISYHIQNAAVFSSSD------ 60

Query: 61  YCSPEADGDLDDTATSSPHPSIPAG--------------------------KGSECEECG 120
                 D DL DTATS PHPSI +                           KG E EE G
Sbjct: 61  ------DDDLQDTATSPPHPSIISDMDGLSSKQKKQQQQQQLSAMINQTKHKGKEIEEFG 120

Query: 121 EIEDRIEVGFVGRDNKNCSTGLKHIGLCLVPVTMVVNYFG 134
           E+EDRIEVGFVGRDN NCSTGLK+IGLCLVPV+M +NYFG
Sbjct: 121 EVEDRIEVGFVGRDN-NCSTGLKNIGLCLVPVSMAINYFG 145

[Close]

BLAST of MC10g1028 vs. NCBI nr
Match: KAG6600765.1 (hypothetical protein SDJN03_05998, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 122 bits (307), Expect = 9.40e-33
Identity = 82/162 (50.62%), Postives = 91/162 (56.17%), Query Frame = 0


Query: 1   MENSATSRICAHDQEATSFSCSWTSSMDDLIMFDTTAATTSDDYYNRGIFSSSSFSSLNN 60
           MENSA SRIC   Q     S SWTSSMDDL++FD  + T S    N  +FSSS       
Sbjct: 1   MENSAISRICTQKQVDEDHS-SWTSSMDDLLLFDH-SKTISYHIQNAAVFSSSD------ 60

Query: 61  YCSPEADGDLDDTATSSPHPSIPAG----------------------------KGSECEE 120
                 D DL DTATS PHPSI +                             KG E EE
Sbjct: 61  ------DDDLQDTATSPPHPSIISDMDGLSSKQKKQQQQQQQQLSAMINQTKHKGKEIEE 120

Query: 121 CGEIEDRIEVGFVGRDNKNCSTGLKHIGLCLVPVTMVVNYFG 134
            GE+EDRIEVGFVGRDN NCSTGLK+IGLCLVPV+M +NYFG
Sbjct: 121 FGEVEDRIEVGFVGRDN-NCSTGLKNIGLCLVPVSMAINYFG 147

[Close]

BLAST of MC10g1028 vs. ExPASy TrEMBL
Match: A0A6J1DA11 (uncharacterized protein LOC111019020 OS=Momordica charantia OX=3673 GN=LOC111019020 PE=4 SV=1)

HSP 1 Score: 257 bits (657), Expect = 3.85e-86
Identity = 134/160 (83.75%), Postives = 134/160 (83.75%), Query Frame = 0


Query: 1   MENSATSRICAHDQEATSFSCSWTSSMDDLIMFDTTAATTSDDYYNRGIFSSSSFSSLNN 60
           MENSATSRICAHDQEATSFSCSWTSSMDDLIMFDTTAATTSDDYYNRGIFSSSSFSSLNN
Sbjct: 1   MENSATSRICAHDQEATSFSCSWTSSMDDLIMFDTTAATTSDDYYNRGIFSSSSFSSLNN 60

Query: 61  YCSPEADGDLDDTATSSPHPSIPA--------------------------GKGSECEECG 120
           YCSPEADGDLDDTATSSPHPSIPA                          GKGSECEECG
Sbjct: 61  YCSPEADGDLDDTATSSPHPSIPAMGELNKKQTNKKMDQMMITEAKKHKEGKGSECEECG 120

Query: 121 EIEDRIEVGFVGRDNKNCSTGLKHIGLCLVPVTMVVNYFG 134
           EIEDRIEVGFVGRDNKNCSTGLKHIGLCLVPVTMVVNYFG
Sbjct: 121 EIEDRIEVGFVGRDNKNCSTGLKHIGLCLVPVTMVVNYFG 160

[Close]

BLAST of MC10g1028 vs. ExPASy TrEMBL
Match: A0A6J1JN91 (uncharacterized protein LOC111486825 OS=Cucurbita maxima OX=3661 GN=LOC111486825 PE=4 SV=1)

HSP 1 Score: 126 bits (316), Expect = 1.86e-34
Identity = 81/159 (50.94%), Postives = 94/159 (59.12%), Query Frame = 0


Query: 1   MENSATSRICAHDQEATSFSCSWTSSMDDLIMFDTTAATTSDDYYNRGIFSSSSFSSLNN 60
           MENSA S+IC   Q     S SWTSSMDDL++FD  + TTS  + N  +FSSS       
Sbjct: 1   MENSAISKICTQKQVDQDHS-SWTSSMDDLLLFDY-SKTTSYHFQNAAVFSSS------- 60

Query: 61  YCSPEADGDLDDTATSSPHPSIPAG-------------------------KGSECEECGE 120
               + D DL DTATS PHPSI +                          +G E EE GE
Sbjct: 61  ----DDDDDLQDTATSPPHPSIISDMDGLSSKQKKQQQQQHTAMINQTKHRGKEIEEFGE 120

Query: 121 IEDRIEVGFVGRDNKNCSTGLKHIGLCLVPVTMVVNYFG 134
           +EDRIEVGFVGRDN NCSTGLK+IGLCLVPV+M +NYFG
Sbjct: 121 VEDRIEVGFVGRDN-NCSTGLKNIGLCLVPVSMAINYFG 145

[Close]

BLAST of MC10g1028 vs. ExPASy TrEMBL
Match: A0A6J1FU25 (uncharacterized protein LOC111446888 OS=Cucurbita moschata OX=3662 GN=LOC111446888 PE=4 SV=1)

HSP 1 Score: 125 bits (313), Expect = 5.29e-34
Identity = 82/160 (51.25%), Postives = 92/160 (57.50%), Query Frame = 0


Query: 1   MENSATSRICAHDQEATSFSCSWTSSMDDLIMFDTTAATTSDDYYNRGIFSSSSFSSLNN 60
           MENSA SRIC   Q     S SWTSSMDDL++FD  + T S  + N  +FSSS       
Sbjct: 1   MENSAISRICTQKQVDQDHS-SWTSSMDDLLLFDH-SKTISYHFQNAAVFSSSD------ 60

Query: 61  YCSPEADGDLDDTATSSPHPSIPAG--------------------------KGSECEECG 120
                 D DL DTATS PHPSI +                           KG E EE G
Sbjct: 61  ------DDDLQDTATSPPHPSIISDMDGLSSKQKKQLQQQQLSAMINQTKHKGKEIEEFG 120

Query: 121 EIEDRIEVGFVGRDNKNCSTGLKHIGLCLVPVTMVVNYFG 134
           E+EDRIEVGFVGRDN NCSTGLK+IGLCLVPV+M +NYFG
Sbjct: 121 EVEDRIEVGFVGRDN-NCSTGLKNIGLCLVPVSMAINYFG 145

[Close]

BLAST of MC10g1028 vs. ExPASy TrEMBL
Match: A0A0A0L2F7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G078270 PE=4 SV=1)

HSP 1 Score: 108 bits (269), Expect = 5.64e-27
Identity = 80/178 (44.94%), Postives = 98/178 (55.06%), Query Frame = 0


Query: 1   MENSATSRICAHDQEAT-------SFSCSWTSSMDDLIMFDTTAATTSDDY--YNRGIFS 60
           MENSATSRIC+H +E T         S S +SSMDDL+MFD    T S  Y  +   +  
Sbjct: 1   MENSATSRICSHREEDTCEPMFHEDRSWSTSSSMDDLLMFDVRTTTHSSSYESFQTSLCC 60

Query: 61  SSSFSSLNNYCSPEA------------DGDLDDTATSSPHPSIPAG-------------- 120
           SS+   ++    P A            D DL+DTATS PHPSI +               
Sbjct: 61  SSA---VDGGAQPSASSFRLKRRKMAADDDLEDTATSPPHPSIVSKMDERSSKQQKKQRA 120

Query: 121 -------KGSECEECGEIEDRI-EVGFVGRDNK--NCSTGLKHIGLCLVPVTMVVNYF 133
                  KG+  E+ GE+EDRI EVGFVGRDN   +CSTGLK+IGLCLVPV+M +NYF
Sbjct: 121 MMNQTKHKGNGSEDYGEVEDRITEVGFVGRDNNKNHCSTGLKNIGLCLVPVSMALNYF 175

[Close]

BLAST of MC10g1028 vs. ExPASy TrEMBL
Match: A0A5D3BKS2 (Putative CTD small phosphatase-like protein 2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1112G00160 PE=4 SV=1)

HSP 1 Score: 99.0 bits (245), Expect = 2.29e-23
Identity = 81/177 (45.76%), Postives = 105/177 (59.32%), Query Frame = 0


Query: 1   MENSATSRICAHDQE----ATSF---SCSWTSSMDDLIMFD--TTAATTSDDYYNRGIFS 60
           MENSA SRIC+H +E    AT     S S +SSMDDL+MFD  +T  ++S +++   +  
Sbjct: 1   MENSANSRICSHGEEDRCEATFHEDPSWSTSSSMDDLLMFDVRSTIHSSSYEFFQTRLCC 60

Query: 61  SSSF-----SSLNNYCSPE----ADGDLDDTATSSPHPSIPA------------------ 120
           SS+      +S +++        AD DL+DTATS PHPSI +                  
Sbjct: 61  SSAVDGGAQASASSFRLKRRKMAADDDLEDTATSPPHPSIVSKMDEPSSKQQKKQRATIN 120

Query: 121 -----GKGSECEECGEIEDRI-EVGFVGRDN-KN-CSTGLKHIGLCLVPVTMVVNYF 133
                GKGSE  + GE+EDRI +VG VGRDN KN CSTGLK+IGLCLVPV+M +NYF
Sbjct: 121 QTKHKGKGSE--DYGEVEDRIIQVGVVGRDNNKNYCSTGLKNIGLCLVPVSMALNYF 175

The following BLAST results are available for this feature:

BLAST of MC10g1028 vs.


Match Name	E-value	Identity	Description

BLAST of MC10g1028 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022151000.1	7.96e-86	83.75	uncharacterized protein LOC111019020 [Momordica charantia]	[more]
XP_022989755.1	3.83e-34	50.94	uncharacterized protein LOC111486825 [Cucurbita maxima]	[more]
XP_022941575.1	1.09e-33	51.25	uncharacterized protein LOC111446888 [Cucurbita moschata]	[more]
KAG7031402.1	4.41e-33	51.25	hypothetical protein SDJN02_05442, partial [Cucurbita argyrosperma subsp. argyro...	[more]
KAG6600765.1	9.40e-33	50.62	hypothetical protein SDJN03_05998, partial [Cucurbita argyrosperma subsp. sorori...	[more]

BLAST of MC10g1028 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1DA11	3.85e-86	83.75	uncharacterized protein LOC111019020 OS=Momordica charantia OX=3673 GN=LOC111019...	[more]
A0A6J1JN91	1.86e-34	50.94	uncharacterized protein LOC111486825 OS=Cucurbita maxima OX=3661 GN=LOC111486825...	[more]
A0A6J1FU25	5.29e-34	51.25	uncharacterized protein LOC111446888 OS=Cucurbita moschata OX=3662 GN=LOC1114468...	[more]
A0A0A0L2F7	5.64e-27	44.94	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G078270 PE=4 SV=1	[more]
A0A5D3BKS2	2.29e-23	45.76	Putative CTD small phosphatase-like protein 2 OS=Cucumis melo var. makuwa OX=119...	[more]

BLAST of MC10g1028 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 66..89

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MC10g1028.1	MC10g1028.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0010089	xylem development