MC02g0579 (gene) Bitter gourd (Dali-11) v1

Overview


Name	MC02g0579
Type	gene
Organism	Momordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Description	Small ubiquitin-related modifier
Location	MC02: 4656933 .. 4658749 (-)
RNA-Seq Expression	MC02g0579
Synteny	MC02g0579

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: utr5polypeptideCDSutr3

Hold the cursor over a type above to highlight its positions in the sequence below.

CAATGACTTTTAGAGTAATTTACATCTACACTATCTTTAAAAAAAGATGGAATTTTCCTTATTTTTATATATTGCAAAATGCAACTGTCCGCTTCACTATTTTGGGCTGGCCCAACAAAAGTCTGGTAGTGAGATCCACAGTTCAAGCTAAGGCCCAATAGTCACAGCCCACCAGCCCACTTCCACGAAGGCGACTGAGCTCTCTTCAGTCTTCACGAGGCGGAAGTCAGAAGATTTAAACCCTAATTTCTGCTACAATCGGCCAAGATTAAGAATGTCGGGCGTCACAAACACACCGAATGCACAGCAAGAGGAAGACAAGAAGCCCAACGACCAATCGGCGCATATCAACCTTAAGGTCAAAGGCCAGGTTGGTTTCCTGTGGGATTATATTTCGTCTGATACTTTTTTGGTGGTTCTTGATGAATAAAGCTTGGGTTTGAGGGTTTCAATTTGATATTTCTTTGATGTGTTTTGGGTTTCTTGGCATTAAATTGCCTTGCCTTCTCTTTTCGATTTCTTTAGGCTATATCGGCTAGGTAACAGGAACTAAAGTATCAATTATAGACTTGTAAGGTGTTGTTGATCGTGATCCCTATAATTCACTCTATGTTCTATATTTGGGCAACACTTTTGGTCATTCGCAAAAATTGAAGCCGGAAAATGAAATGAACATTGTAAGTGGCAGGTGCGGTAGTTATCTTTCGTTATTTGAATTCTCCCCCTCCCAGAATCTAGCAAAGCCAATTCAGTTTCTAAATAGTGCTGCTCTGTGGTCTTCGTTGATTATTGTTACAGATGATGGTGGGTTAACTTGAGGGTGTGTTTAATCTGATAAATTTTTTCATTCTTAAGCAGTGTGCTAGGAGATTGAAGTGTTTATGAATCCTTGGCCCCATTCTTACTGCTCTAGTTTTCCTGTCATGGAGTGATTGATCCAAGCCTTTTTCTTGCCTCTTGGCAAATTTCCAGAGATTGAATCGACTCAAATTGTCTTTTTCCTGTTGTCTGTCCTGTTTGTCTTCCCGTGACATATGTCTCAGTTCCCTGTATCTGTTCTATCTCATTTTATCTGTTACCATTTCCTTTCTCCATCATTCTCCTTTATCAAGTACTTTATGAAATGCTCCGTACACTTTTATTCCTTCTCTATTTTTGGTTATCAATTACAGCAATTAGTTCAAATAAATTTTGGTTAGAAATAGTCTTAGGATCGCAAAACTTTCTTGATTTCGACGAGTCTGTATTTACGAAAGAAGAAAGATAGATAACCTCATTAGTTATCATTCTTTGAGTTTCTTTAGGATGGGAATGAGGTGTTCTTCAGGATTAAAAGGAGCACTCAGCTGAAGAAACTGATGAATGCTTACTGTGATCGACAATCTGTGGATCTGAACTCCATTGCTTTTCTATTTGATGGTCGTCGTCTTCGTGGAGAGCAGACTCCCGATGAGGTAGCCTTTTATCTGATCTAAGCTCAGATAGGTATTCTAGATTAAATTCATGTAATTCTAATAAAACCATGTGTCGTATCAGCTAGAGATGGAGGATGGTGATGAGATTGATGCAATGTTGCACCAGACTGGTGGATCTACTCATTGAATACGTGCTGCTGGCTCTGTTCCTTTACGAACTAGTATTTTCATTGTACTTGCTTGCAGGCTTATTAGTAGGCTTTGTAGATTCGAATGTTCTCATAATAGTCTCCTTTCTAAAATGTCAAAACTAGCTTTAACTGGTTAAAGGGCTTTAGTGTTTGGTCAGTAATCTCTTCTCACATCAAATATTTCTTGGCTTGCTGTACGGATTGGAAGCCT

mRNA sequence

CAATGACTTTTAGAGTAATTTACATCTACACTATCTTTAAAAAAAGATGGAATTTTCCTTATTTTTATATATTGCAAAATGCAACTGTCCGCTTCACTATTTTGGGCTGGCCCAACAAAAGTCTGGTAGTGAGATCCACAGTTCAAGCTAAGGCCCAATAGTCACAGCCCACCAGCCCACTTCCACGAAGGCGACTGAGCTCTCTTCAGTCTTCACGAGGCGGAAGTCAGAAGATTTAAACCCTAATTTCTGCTACAATCGGCCAAGATTAAGAATGTCGGGCGTCACAAACACACCGAATGCACAGCAAGAGGAAGACAAGAAGCCCAACGACCAATCGGCGCATATCAACCTTAAGGTCAAAGGCCAGGATGGGAATGAGGTGTTCTTCAGGATTAAAAGGAGCACTCAGCTGAAGAAACTGATGAATGCTTACTGTGATCGACAATCTGTGGATCTGAACTCCATTGCTTTTCTATTTGATGGTCGTCGTCTTCGTGGAGAGCAGACTCCCGATGAGCTAGAGATGGAGGATGGTGATGAGATTGATGCAATGTTGCACCAGACTGGTGGATCTACTCATTGAATACGTGCTGCTGGCTCTGTTCCTTTACGAACTAGTATTTTCATTGTACTTGCTTGCAGGCTTATTAGTAGGCTTTGTAGATTCGAATGTTCTCATAATAGTCTCCTTTCTAAAATGTCAAAACTAGCTTTAACTGGTTAAAGGGCTTTAGTGTTTGGTCAGTAATCTCTTCTCACATCAAATATTTCTTGGCTTGCTGTACGGATTGGAAGCCT

Coding sequence (CDS)

ATGTCGGGCGTCACAAACACACCGAATGCACAGCAAGAGGAAGACAAGAAGCCCAACGACCAATCGGCGCATATCAACCTTAAGGTCAAAGGCCAGGATGGGAATGAGGTGTTCTTCAGGATTAAAAGGAGCACTCAGCTGAAGAAACTGATGAATGCTTACTGTGATCGACAATCTGTGGATCTGAACTCCATTGCTTTTCTATTTGATGGTCGTCGTCTTCGTGGAGAGCAGACTCCCGATGAGCTAGAGATGGAGGATGGTGATGAGATTGATGCAATGTTGCACCAGACTGGTGGATCTACTCATTGA

Protein sequence

MSGVTNTPNAQQEEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRLRGEQTPDELEMEDGDEIDAMLHQTGGSTH

Homology

[Close]

BLAST of MC02g0579 vs. ExPASy Swiss-Prot
Match: P55852 (Small ubiquitin-related modifier 1 OS=Arabidopsis thaliana OX=3702 GN=SUMO1 PE=1 SV=2)

HSP 1 Score: 173.3 bits (438), Expect = 1.4e-42
Identity = 85/93 (91.40%), Postives = 88/93 (94.62%), Query Frame = 0


Query: 9   NAQQEEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFL 68
           +A QEEDKKP D  AHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVD+NSIAFL
Sbjct: 2   SANQEEDKKPGDGGAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDMNSIAFL 61

Query: 69  FDGRRLRGEQTPDELEMEDGDEIDAMLHQTGGS 102
           FDGRRLR EQTPDEL+MEDGDEIDAMLHQTGGS
Sbjct: 62  FDGRRLRAEQTPDELDMEDGDEIDAMLHQTGGS 94

[Close]

BLAST of MC02g0579 vs. ExPASy Swiss-Prot
Match: Q9FLP6 (Small ubiquitin-related modifier 2 OS=Arabidopsis thaliana OX=3702 GN=SUMO2 PE=1 SV=1)

HSP 1 Score: 167.9 bits (424), Expect = 5.9e-41
Identity = 85/92 (92.39%), Postives = 86/92 (93.48%), Query Frame = 0


Query: 9   NAQQEEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFL 68
           +A  EEDKKP DQ AHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVD NSIAFL
Sbjct: 2   SATPEEDKKP-DQGAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDFNSIAFL 61

Query: 69  FDGRRLRGEQTPDELEMEDGDEIDAMLHQTGG 101
           FDGRRLR EQTPDELEMEDGDEIDAMLHQTGG
Sbjct: 62  FDGRRLRAEQTPDELEMEDGDEIDAMLHQTGG 92

[Close]

BLAST of MC02g0579 vs. ExPASy Swiss-Prot
Match: P55857 (Small ubiquitin-related modifier 1 OS=Oryza sativa subsp. japonica OX=39947 GN=SUMO1 PE=1 SV=1)

HSP 1 Score: 162.9 bits (411), Expect = 1.9e-39
Identity = 83/95 (87.37%), Postives = 86/95 (90.53%), Query Frame = 0


Query: 9   NAQQEEDKKP---NDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSI 68
           +A  EEDKKP       AHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVD+N+I
Sbjct: 2   SAAGEEDKKPAGGEGGGAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDMNAI 61

Query: 69  AFLFDGRRLRGEQTPDELEMEDGDEIDAMLHQTGG 101
           AFLFDGRRLRGEQTPDELEMEDGDEIDAMLHQTGG
Sbjct: 62  AFLFDGRRLRGEQTPDELEMEDGDEIDAMLHQTGG 96

[Close]

BLAST of MC02g0579 vs. ExPASy Swiss-Prot
Match: O13351 (Ubiquitin-like protein pmt3/smt3 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=pmt3 PE=1 SV=2)

HSP 1 Score: 114.8 bits (286), Expect = 5.9e-25
Identity = 56/102 (54.90%), Postives = 73/102 (71.57%), Query Frame = 0


Query: 2   SGVTNTPNAQQEEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVD 61
           S +T T     ++D KP+ +  HINLKV GQD NEVFF+IK++T+  KLM  YC RQ   
Sbjct: 15  SAITPTTGDTSQQDVKPSTE--HINLKVVGQDNNEVFFKIKKTTEFSKLMKIYCARQGKS 74

Query: 62  LNSIAFLFDGRRLRGEQTPDELEMEDGDEIDAMLHQTGGSTH 104
           +NS+ FL DG R+R +QTP EL+MEDGD+I+A+L Q GG TH
Sbjct: 75  MNSLRFLVDGERIRPDQTPAELDMEDGDQIEAVLEQLGGCTH 114

[Close]

BLAST of MC02g0579 vs. ExPASy Swiss-Prot
Match: Q9FLP5 (Small ubiquitin-related modifier 3 OS=Arabidopsis thaliana OX=3702 GN=SUMO3 PE=1 SV=1)

HSP 1 Score: 100.1 bits (248), Expect = 1.5e-20
Identity = 50/89 (56.18%), Postives = 65/89 (73.03%), Query Frame = 0


Query: 14  EDKKPND--QSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLFDG 73
           +D KP D  Q AH+ LKVK QDG+EV F+ K+S  LKKLM  YCDR+ + L++ AF+F+G
Sbjct: 5   QDDKPIDQEQEAHVILKVKSQDGDEVLFKNKKSAPLKKLMYVYCDRRGLKLDAFAFIFNG 64

Query: 74  RRLRGEQTPDELEMEDGDEIDAMLHQTGG 101
            R+ G +TPDEL+MEDGD IDA    +GG
Sbjct: 65  ARIGGLETPDELDMEDGDVIDACRAMSGG 93

[Close]

BLAST of MC02g0579 vs. NCBI nr
Match: XP_022149763.1 (small ubiquitin-related modifier 1-like [Momordica charantia])

HSP 1 Score: 206 bits (523), Expect = 9.21e-67
Identity = 103/103 (100.00%), Postives = 103/103 (100.00%), Query Frame = 0


Query: 1   MSGVTNTPNAQQEEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSV 60
           MSGVTNTPNAQQEEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSV
Sbjct: 1   MSGVTNTPNAQQEEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSV 60

Query: 61  DLNSIAFLFDGRRLRGEQTPDELEMEDGDEIDAMLHQTGGSTH 103
           DLNSIAFLFDGRRLRGEQTPDELEMEDGDEIDAMLHQTGGSTH
Sbjct: 61  DLNSIAFLFDGRRLRGEQTPDELEMEDGDEIDAMLHQTGGSTH 103

[Close]

BLAST of MC02g0579 vs. NCBI nr
Match: XP_004150752.1 (small ubiquitin-related modifier 1 [Cucumis sativus] >XP_038902909.1 small ubiquitin-related modifier 1-like [Benincasa hispida] >KGN46994.1 hypothetical protein Csa_020805 [Cucumis sativus])

HSP 1 Score: 189 bits (479), Expect = 4.33e-60
Identity = 98/102 (96.08%), Postives = 98/102 (96.08%), Query Frame = 0


Query: 1   MSGVTNTPNAQQEEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSV 60
           MSGVTNT   QQEEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSV
Sbjct: 1   MSGVTNT---QQEEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSV 60

Query: 61  DLNSIAFLFDGRRLRGEQTPDELEMEDGDEIDAMLHQTGGST 102
           DLNSIAFLFDGRRLR EQTPDELEMEDGDEIDAMLHQTGGST
Sbjct: 61  DLNSIAFLFDGRRLRAEQTPDELEMEDGDEIDAMLHQTGGST 99

[Close]

BLAST of MC02g0579 vs. NCBI nr
Match: XP_022986050.1 (small ubiquitin-related modifier 1-like [Cucurbita maxima])

HSP 1 Score: 188 bits (478), Expect = 6.15e-60
Identity = 97/102 (95.10%), Postives = 98/102 (96.08%), Query Frame = 0


Query: 1   MSGVTNTPNAQQEEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSV 60
           MSGVTNTP   QEEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSV
Sbjct: 1   MSGVTNTP---QEEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSV 60

Query: 61  DLNSIAFLFDGRRLRGEQTPDELEMEDGDEIDAMLHQTGGST 102
           DLNSIAFLFDGRRLR EQTPDELEMEDGDEIDAMLHQTGGS+
Sbjct: 61  DLNSIAFLFDGRRLRAEQTPDELEMEDGDEIDAMLHQTGGSS 99

[Close]

BLAST of MC02g0579 vs. NCBI nr
Match: XP_008456407.1 (PREDICTED: small ubiquitin-related modifier 1 [Cucumis melo] >KAA0054458.1 small ubiquitin-related modifier 1 [Cucumis melo var. makuwa] >TYK14581.1 small ubiquitin-related modifier 1 [Cucumis melo var. makuwa])

HSP 1 Score: 187 bits (475), Expect = 1.76e-59
Identity = 97/102 (95.10%), Postives = 98/102 (96.08%), Query Frame = 0


Query: 1   MSGVTNTPNAQQEEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSV 60
           MSGVTNT   QQEEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSV
Sbjct: 1   MSGVTNT---QQEEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSV 60

Query: 61  DLNSIAFLFDGRRLRGEQTPDELEMEDGDEIDAMLHQTGGST 102
           DLNSIAFLFDGRRLR EQTPDELEMEDGDEIDAMLHQTGGS+
Sbjct: 61  DLNSIAFLFDGRRLRAEQTPDELEMEDGDEIDAMLHQTGGSS 99

[Close]

BLAST of MC02g0579 vs. NCBI nr
Match: XP_022943304.1 (small ubiquitin-related modifier 1 [Cucurbita moschata] >XP_022944672.1 small ubiquitin-related modifier 1 [Cucurbita moschata] >XP_022986048.1 small ubiquitin-related modifier 1 [Cucurbita maxima] >XP_023512038.1 small ubiquitin-related modifier 1 [Cucurbita pepo subsp. pepo] >XP_023513384.1 small ubiquitin-related modifier 1 [Cucurbita pepo subsp. pepo] >KAG6570547.1 Small ubiquitin-related modifier 2, partial [Cucurbita argyrosperma subsp. sororia] >KAG7010405.1 Small ubiquitin-related modifier 2 [Cucurbita argyrosperma subsp. argyrosperma] >KAG7010406.1 Small ubiquitin-related modifier 2 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 187 bits (475), Expect = 1.76e-59
Identity = 97/102 (95.10%), Postives = 98/102 (96.08%), Query Frame = 0


Query: 1   MSGVTNTPNAQQEEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSV 60
           MSGVTNT   QQEEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSV
Sbjct: 1   MSGVTNT---QQEEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSV 60

Query: 61  DLNSIAFLFDGRRLRGEQTPDELEMEDGDEIDAMLHQTGGST 102
           DLNSIAFLFDGRRLR EQTPDELEMEDGDEIDAMLHQTGGS+
Sbjct: 61  DLNSIAFLFDGRRLRAEQTPDELEMEDGDEIDAMLHQTGGSS 99

[Close]

BLAST of MC02g0579 vs. ExPASy TrEMBL
Match: A0A6J1D7M3 (Small ubiquitin-related modifier OS=Momordica charantia OX=3673 GN=LOC111018116 PE=3 SV=1)

HSP 1 Score: 206 bits (523), Expect = 4.46e-67
Identity = 103/103 (100.00%), Postives = 103/103 (100.00%), Query Frame = 0


Query: 1   MSGVTNTPNAQQEEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSV 60
           MSGVTNTPNAQQEEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSV
Sbjct: 1   MSGVTNTPNAQQEEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSV 60

Query: 61  DLNSIAFLFDGRRLRGEQTPDELEMEDGDEIDAMLHQTGGSTH 103
           DLNSIAFLFDGRRLRGEQTPDELEMEDGDEIDAMLHQTGGSTH
Sbjct: 61  DLNSIAFLFDGRRLRGEQTPDELEMEDGDEIDAMLHQTGGSTH 103

[Close]

BLAST of MC02g0579 vs. ExPASy TrEMBL
Match: A0A0A0KDV8 (Small ubiquitin-related modifier OS=Cucumis sativus OX=3659 GN=Csa_6G157680 PE=3 SV=1)

HSP 1 Score: 189 bits (479), Expect = 2.09e-60
Identity = 98/102 (96.08%), Postives = 98/102 (96.08%), Query Frame = 0


Query: 1   MSGVTNTPNAQQEEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSV 60
           MSGVTNT   QQEEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSV
Sbjct: 1   MSGVTNT---QQEEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSV 60

Query: 61  DLNSIAFLFDGRRLRGEQTPDELEMEDGDEIDAMLHQTGGST 102
           DLNSIAFLFDGRRLR EQTPDELEMEDGDEIDAMLHQTGGST
Sbjct: 61  DLNSIAFLFDGRRLRAEQTPDELEMEDGDEIDAMLHQTGGST 99

[Close]

BLAST of MC02g0579 vs. ExPASy TrEMBL
Match: A0A6J1JCZ0 (Small ubiquitin-related modifier OS=Cucurbita maxima OX=3661 GN=LOC111483905 PE=3 SV=1)

HSP 1 Score: 188 bits (478), Expect = 2.98e-60
Identity = 97/102 (95.10%), Postives = 98/102 (96.08%), Query Frame = 0


Query: 1   MSGVTNTPNAQQEEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSV 60
           MSGVTNTP   QEEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSV
Sbjct: 1   MSGVTNTP---QEEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSV 60

Query: 61  DLNSIAFLFDGRRLRGEQTPDELEMEDGDEIDAMLHQTGGST 102
           DLNSIAFLFDGRRLR EQTPDELEMEDGDEIDAMLHQTGGS+
Sbjct: 61  DLNSIAFLFDGRRLRAEQTPDELEMEDGDEIDAMLHQTGGSS 99

[Close]

BLAST of MC02g0579 vs. ExPASy TrEMBL
Match: A0A6J1FTW7 (Small ubiquitin-related modifier OS=Cucurbita moschata OX=3662 GN=LOC111448116 PE=3 SV=1)

HSP 1 Score: 187 bits (475), Expect = 8.54e-60
Identity = 97/102 (95.10%), Postives = 98/102 (96.08%), Query Frame = 0


Query: 1   MSGVTNTPNAQQEEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSV 60
           MSGVTNT   QQEEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSV
Sbjct: 1   MSGVTNT---QQEEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSV 60

Query: 61  DLNSIAFLFDGRRLRGEQTPDELEMEDGDEIDAMLHQTGGST 102
           DLNSIAFLFDGRRLR EQTPDELEMEDGDEIDAMLHQTGGS+
Sbjct: 61  DLNSIAFLFDGRRLRAEQTPDELEMEDGDEIDAMLHQTGGSS 99

[Close]

BLAST of MC02g0579 vs. ExPASy TrEMBL
Match: A0A5A7UHK7 (Small ubiquitin-related modifier OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold552G00760 PE=3 SV=1)

HSP 1 Score: 187 bits (475), Expect = 8.54e-60
Identity = 97/102 (95.10%), Postives = 98/102 (96.08%), Query Frame = 0


Query: 1   MSGVTNTPNAQQEEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSV 60
           MSGVTNT   QQEEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSV
Sbjct: 1   MSGVTNT---QQEEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSV 60

Query: 61  DLNSIAFLFDGRRLRGEQTPDELEMEDGDEIDAMLHQTGGST 102
           DLNSIAFLFDGRRLR EQTPDELEMEDGDEIDAMLHQTGGS+
Sbjct: 61  DLNSIAFLFDGRRLRAEQTPDELEMEDGDEIDAMLHQTGGSS 99

[Close]

BLAST of MC02g0579 vs. TAIR 10
Match: AT4G26840.1 (small ubiquitin-like modifier 1 )

HSP 1 Score: 173.3 bits (438), Expect = 9.9e-44
Identity = 85/93 (91.40%), Postives = 88/93 (94.62%), Query Frame = 0


Query: 9   NAQQEEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFL 68
           +A QEEDKKP D  AHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVD+NSIAFL
Sbjct: 2   SANQEEDKKPGDGGAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDMNSIAFL 61

Query: 69  FDGRRLRGEQTPDELEMEDGDEIDAMLHQTGGS 102
           FDGRRLR EQTPDEL+MEDGDEIDAMLHQTGGS
Sbjct: 62  FDGRRLRAEQTPDELDMEDGDEIDAMLHQTGGS 94

[Close]

BLAST of MC02g0579 vs. TAIR 10
Match: AT5G55160.1 (small ubiquitin-like modifier 2 )

HSP 1 Score: 167.9 bits (424), Expect = 4.2e-42
Identity = 85/92 (92.39%), Postives = 86/92 (93.48%), Query Frame = 0


Query: 9   NAQQEEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFL 68
           +A  EEDKKP DQ AHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVD NSIAFL
Sbjct: 2   SATPEEDKKP-DQGAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDFNSIAFL 61

Query: 69  FDGRRLRGEQTPDELEMEDGDEIDAMLHQTGG 101
           FDGRRLR EQTPDELEMEDGDEIDAMLHQTGG
Sbjct: 62  FDGRRLRAEQTPDELEMEDGDEIDAMLHQTGG 92

[Close]

BLAST of MC02g0579 vs. TAIR 10
Match: AT5G55160.2 (small ubiquitin-like modifier 2 )

HSP 1 Score: 158.7 bits (400), Expect = 2.5e-39
Identity = 85/105 (80.95%), Postives = 86/105 (81.90%), Query Frame = 0


Query: 9   NAQQEEDKKPNDQSAHINLKVKGQ-------------DGNEVFFRIKRSTQLKKLMNAYC 68
           +A  EEDKKP DQ AHINLKVKGQ             DGNEVFFRIKRSTQLKKLMNAYC
Sbjct: 2   SATPEEDKKP-DQGAHINLKVKGQAFFVVGTWLVIDTDGNEVFFRIKRSTQLKKLMNAYC 61

Query: 69  DRQSVDLNSIAFLFDGRRLRGEQTPDELEMEDGDEIDAMLHQTGG 101
           DRQSVD NSIAFLFDGRRLR EQTPDELEMEDGDEIDAMLHQTGG
Sbjct: 62  DRQSVDFNSIAFLFDGRRLRAEQTPDELEMEDGDEIDAMLHQTGG 105

[Close]

BLAST of MC02g0579 vs. TAIR 10
Match: AT5G55170.1 (small ubiquitin-like modifier 3 )

HSP 1 Score: 100.1 bits (248), Expect = 1.1e-21
Identity = 50/89 (56.18%), Postives = 65/89 (73.03%), Query Frame = 0


Query: 14  EDKKPND--QSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLFDG 73
           +D KP D  Q AH+ LKVK QDG+EV F+ K+S  LKKLM  YCDR+ + L++ AF+F+G
Sbjct: 5   QDDKPIDQEQEAHVILKVKSQDGDEVLFKNKKSAPLKKLMYVYCDRRGLKLDAFAFIFNG 64

Query: 74  RRLRGEQTPDELEMEDGDEIDAMLHQTGG 101
            R+ G +TPDEL+MEDGD IDA    +GG
Sbjct: 65  ARIGGLETPDELDMEDGDVIDACRAMSGG 93

[Close]

BLAST of MC02g0579 vs. TAIR 10
Match: AT5G55856.1 (Ubiquitin-like superfamily protein )

HSP 1 Score: 93.2 bits (230), Expect = 1.3e-19
Identity = 45/86 (52.33%), Postives = 63/86 (73.26%), Query Frame = 0


Query: 15  DKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRL 74
           DKKP   S+HI +KVK QD   V+FRIKR  +L+K+M+AY D+  V+++++ FLFDG R+
Sbjct: 5   DKKPLIPSSHITVKVKNQDDICVYFRIKRDVELRKMMHAYSDKVGVEMSTLRFLFDGNRI 64

Query: 75  RGEQTPDELEMEDGDEIDAMLHQTGG 101
           +  QTP+EL +ED DEI+A   Q GG
Sbjct: 65  KLNQTPNELGLEDEDEIEAFGEQLGG 90

The following BLAST results are available for this feature:

BLAST of MC02g0579 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P55852	1.4e-42	91.40	Small ubiquitin-related modifier 1 OS=Arabidopsis thaliana OX=3702 GN=SUMO1 PE=1...	[more]
Q9FLP6	5.9e-41	92.39	Small ubiquitin-related modifier 2 OS=Arabidopsis thaliana OX=3702 GN=SUMO2 PE=1...	[more]
P55857	1.9e-39	87.37	Small ubiquitin-related modifier 1 OS=Oryza sativa subsp. japonica OX=39947 GN=S...	[more]
O13351	5.9e-25	54.90	Ubiquitin-like protein pmt3/smt3 OS=Schizosaccharomyces pombe (strain 972 / ATCC...	[more]
Q9FLP5	1.5e-20	56.18	Small ubiquitin-related modifier 3 OS=Arabidopsis thaliana OX=3702 GN=SUMO3 PE=1...	[more]

BLAST of MC02g0579 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022149763.1	9.21e-67	100.00	small ubiquitin-related modifier 1-like [Momordica charantia]	[more]
XP_004150752.1	4.33e-60	96.08	small ubiquitin-related modifier 1 [Cucumis sativus] >XP_038902909.1 small ubiqu...	[more]
XP_022986050.1	6.15e-60	95.10	small ubiquitin-related modifier 1-like [Cucurbita maxima]	[more]
XP_008456407.1	1.76e-59	95.10	PREDICTED: small ubiquitin-related modifier 1 [Cucumis melo] >KAA0054458.1 small...	[more]
XP_022943304.1	1.76e-59	95.10	small ubiquitin-related modifier 1 [Cucurbita moschata] >XP_022944672.1 small ub...	[more]

BLAST of MC02g0579 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1D7M3	4.46e-67	100.00	Small ubiquitin-related modifier OS=Momordica charantia OX=3673 GN=LOC111018116 ...	[more]
A0A0A0KDV8	2.09e-60	96.08	Small ubiquitin-related modifier OS=Cucumis sativus OX=3659 GN=Csa_6G157680 PE=3...	[more]
A0A6J1JCZ0	2.98e-60	95.10	Small ubiquitin-related modifier OS=Cucurbita maxima OX=3661 GN=LOC111483905 PE=...	[more]
A0A6J1FTW7	8.54e-60	95.10	Small ubiquitin-related modifier OS=Cucurbita moschata OX=3662 GN=LOC111448116 P...	[more]
A0A5A7UHK7	8.54e-60	95.10	Small ubiquitin-related modifier OS=Cucumis melo var. makuwa OX=1194695 GN=E5676...	[more]

BLAST of MC02g0579 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G26840.1	9.9e-44	91.40	small ubiquitin-like modifier 1	[more]
AT5G55160.1	4.2e-42	92.39	small ubiquitin-like modifier 2	[more]
AT5G55160.2	2.5e-39	80.95	small ubiquitin-like modifier 2	[more]
AT5G55170.1	1.1e-21	56.18	small ubiquitin-like modifier 3	[more]
AT5G55856.1	1.3e-19	52.33	Ubiquitin-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25

Position :

Zoom :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000626	Ubiquitin-like domain	SMART	SM00213	ubq_7	coord: 25..96 e-value: 5.1E-14 score: 62.6
IPR000626	Ubiquitin-like domain	PROSITE	PS50053	UBIQUITIN_2	coord: 23..100 score: 15.94969
None	No IPR available	GENE3D	3.10.20.90		coord: 2..100 e-value: 2.2E-41 score: 142.6
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..29
None	No IPR available	PANTHER	PTHR10562	SMALL UBIQUITIN-RELATED MODIFIER	coord: 9..101
None	No IPR available	PANTHER	PTHR10562:SF87	SMALL UBIQUITIN-RELATED MODIFIER	coord: 9..101
None	No IPR available	CDD	cd16116	Ubl_Smt3_like	coord: 23..96 e-value: 1.09253E-48 score: 147.375
IPR022617	Rad60/SUMO-like domain	PFAM	PF11976	Rad60-SLD	coord: 25..95 e-value: 7.1E-25 score: 86.6
IPR029071	Ubiquitin-like domain superfamily	SUPERFAMILY	54236	Ubiquitin-like	coord: 10..100

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MC02g0579.1	MC02g0579.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0016925	protein sumoylation
cellular_component	GO:0005737	cytoplasm
cellular_component	GO:0005634	nucleus
molecular_function	GO:0031386	protein tag
molecular_function	GO:0044389	ubiquitin-like protein ligase binding
molecular_function	GO:0005515	protein binding