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Sequences
The following sequences are available for this feature:
Gene sequence (with intron) Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. GCTCCTCGCCGGATTCCAAAACGCGGCCAAATCCTCCGCCGTGTTGTTAAAAAGTTGTTCTTCATCTTTCTCTGTTCCGTCGACCGGAATTCTCCTCCACCGCCC mRNA sequence GCTCCTCGCCGGATTCCAAAACGCGGCCAAATCCTCCGCCGTGTTGTTAAAAAGTTGTTCTTCATCTTTCTCTGTTCCGTCGACCGGAATTCTCCTCCACCGCCC Coding sequence (CDS) GCTCCTCGCCGGATTCCAAAACGCGGCCAAATCCTCCGCCGTGTTGTTAAAAAGTTGTTCTTCATCTTTCTCTGTTCCGTCGACCGGAATTCTCCTCCACCGCCC Protein sequence APRRIPKRGQILRRVVKKLFFIFLCSVDRNSPPPP
Homology
BLAST of MC01g1119 vs. NCBI nr
Match: KAG6594821.1 (hypothetical protein SDJN03_11374, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 51.2 bits (121), Expect = 9.64e-07 Identity = 24/35 (68.57%), Postives = 28/35 (80.00%), Query Frame = 0
Query: 1 APRRIPKRGQILRRVVKKLFFIFLCSVDRNSPPPP 35
APR IPKRGQ+LRR++KKLFF+ CS SPPPP
Sbjct: 56 APRWIPKRGQVLRRILKKLFFLCFCS----SPPPP 86
BLAST of MC01g1119 vs. NCBI nr
Match: KGN49746.1 (hypothetical protein Csa_017810 [Cucumis sativus]) HSP 1 Score: 48.5 bits (114), Expect = 3.75e-06 Identity = 22/35 (62.86%), Postives = 25/35 (71.43%), Query Frame = 0
Query: 1 APRRIPKRGQILRRVVKKLFFIFLCSVDRNSPPPP 35
APR IPKRG++LRRV+K LFF LCS PP P
Sbjct: 6 APRWIPKRGEVLRRVLKNLFFFCLCSPPALPPPTP 40
BLAST of MC01g1119 vs. NCBI nr
Match: KAG6579170.1 (hypothetical protein SDJN03_23618, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 47.4 bits (111), Expect = 1.32e-05 Identity = 20/35 (57.14%), Postives = 24/35 (68.57%), Query Frame = 0
Query: 1 APRRIPKRGQILRRVVKKLFFIFLCSVDRNSPPPP 35
PR IPKRG +LRRV++KLFF +CS PPP
Sbjct: 15 TPRLIPKRGAVLRRVLEKLFFFCICSAANPKAPPP 49
BLAST of MC01g1119 vs. ExPASy TrEMBL
Match: A0A0A0KPU0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G098990 PE=4 SV=1) HSP 1 Score: 48.5 bits (114), Expect = 1.82e-06 Identity = 22/35 (62.86%), Postives = 25/35 (71.43%), Query Frame = 0
Query: 1 APRRIPKRGQILRRVVKKLFFIFLCSVDRNSPPPP 35
APR IPKRG++LRRV+K LFF LCS PP P
Sbjct: 6 APRWIPKRGEVLRRVLKNLFFFCLCSPPALPPPTP 40
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
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| Match Name | E-value | Identity | Description | |
|---|
| KAG6594821.1 | 9.64e-07 | 68.57 | hypothetical protein SDJN03_11374, partial [Cucurbita argyrosperma subsp. sorori... | [more] |
| KGN49746.1 | 3.75e-06 | 62.86 | hypothetical protein Csa_017810 [Cucumis sativus] | [more] |
| KAG6579170.1 | 1.32e-05 | 57.14 | hypothetical protein SDJN03_23618, partial [Cucurbita argyrosperma subsp. sorori... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| A0A0A0KPU0 | 1.82e-06 | 62.86 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G098990 PE=4 SV=1 | [more] |
| Match Name | E-value | Identity | Description | |
|---|
Relationships
The following mRNA feature(s) are a part of this gene:
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