Csor.00g172680 (gene) Silver-seed gourd (wild; sororia) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSstart_codoninitialpolypeptideintroninternalterminalstop_codon Hold the cursor over a type above to highlight its positions in the sequence below.ATGAGGAAAGGTACTAAGAGGAAGACAACACAGAAGGAAGAGGATAAACCTGCGGAACCTAAACCTGTGGAACCATCTCGCTCCAAGCGGACAAAGGTCCCCAAACCCGAATCCGAACCCCAGTACTTTGAGGACAAGCGCAACTTGGTAATGTACATTCTACATGAATTTTTTTGTTTTGTTGCTGTTATGACTCTGATTTTCAGTCTCTTTTGAGTCTTGCGCTAGTTTTGATTGTTATCTCATTGGATTTCTTTTCATTTCTTGTCTGAGTCTTGAATTCCCACTGTCATGGATTATTGAGCAGGGAAGAACATTGGGCTGTGCCTAGATACAGATGCAATTTTTTTTGTTGTGTGGTTGGTTTCATTTGTTCTTCTGGGTTCCTTAAATTAGTGTAAGAAAGTATGCTGCGGCATTACCAGCTGCAATCACCTTCTGTATTTTGCTCCGTTATTGATTAGCTTGAACGTGTGAATGAAGCTTGTTTATGGTAAATTTGACATTTCCTTCACTGGGGCTCGTATGAGGTTTGCCAATTGGCATTTTGATTTACAAATAATAATTATTGAATGCAGGAAGATCTTTGGAAAGCAGCATTTCCTGTCGGGACAGAGGTCTGGCATAAACTAAAGTGCTTGTTTATTTCTATCTGAAGTCTTATTGTTCTGTTGCTTATACATTTACATGTTCTTTTATTTCAGTGGGATCAATTGGATACCGTTTATCAGTTCAACTGGAATTTCTCAAATCTAGAAGTGAGTTTGACAATCTTGGTTTTTTTTTTTTAAATTTTCTATATTGGACGTGAATTTATTTGAATGGGCGATATAACATTTGCAATTATTTTCAGGATGCATTTGAAGAGGGAGGAAAGTTGTATGGCGAGAAGGTTTACCTATTTGGTTGTACAGAGCGTAAGTAGCTTAACCAAGAATCTTATTTTATATTACATATACAATACAAGACAATCTTATTAAGGTCAAGTTTTCTTTCAGTTTACCATTGTTTTGTAGTCTACTTATGATAATTCCTATTTGTGCAGCTCAATTGGTTCCTTTCAAGGGAGAAAATAAAGTTATATGCATACCTGTTGTGGTGGCTGTAAGTCATTATATTTCTCTTAATTTTTGTTTTTGCATTCTGTTGTATCAAGCTATAGTTTCTATTAGTAGCCATGTTAATCGACCGACCACCGTATAACTAATACCTGATTGAAAGAAGTTATCGACTGGTTAGTACCTTTCTTATTTGTTAACGTCCACCGAATTAGCATGGGATTTAATTCCTACGGCTATTGGGTTTTATGGTTTTACAGGTTGCATCTCCTTTCCCACCTTCTGATAAAATTGGCATCAACTCTGTTCAAAGAGAGGCTGAAGAGATAGTTCCCATGAAACAGATGAAAATGGACTGGGTTCCTTATATTCCCTTGGACCAAAGGTCCTCACTTGTGATTTTTTTTTTCTTAGCATCCTTTAGATTGTAACTCAAAGTTTATAATTGACCATTCAGTTTAATTCTTCTTCAGAGGTAGTCAAGTTGATAAGTTGAAATCTCAAATATTCATCCTCAGTTGCACTCAGAGAAGGTACAAACATGAATGACTTTCCACATCCATTTGGTATTCACTCACAATTTCAGTAAATTTTTTTATTGCTACCCTTTGATTGTTCTTATTCATAAACGGATCGATCGTTTCTGCAGAGCTGGTTTGAAGCATTTGAAAATAGATCGTGTCAAGAAATTTGAGTATTGCTTACCCTGTAAGTTCTTCGAACAATATGGTCGTTAACTTTATGATTGATAATTTATTGGATGAACTATCCTCTTGAGAGAAAACAGATCTTGAGCTGTAGTTTTGGAGAGTTCCACATTGGTTGGGGAGGAGAACGAAACACCCTTTATAAGGGCGTCAAAACCTTCCCCTAATAAAGCCGTCCGAAGCCCGAAGGAAAAGCCCAAAGAAGACAATATCGGCTAGTGGTGGGCTTGGGCCGCTACAAGTTTCCTCACACAAATTTTCAATTTTGTTGATTTTTAATGTCATCTAGATCATCCAGCTAATGGTTATCAATGAAGTCTATACCTGTTTGTCATATCTCATACTGTCATTTTTCTGGCAGATTTCTACCATCCCTTTAAGGAAGATGAAGTTGAACAAAGCACTGAGGTTCCAATTATCTTCCCAATCGACCCAAAGCCAGTAAGCTTTTAATTCTCACTGTTAAAAAAGGCTCATGAATGCATGATGTGTGGGGAAGAAACTAGCCGAGCATTCTTATTCACAATCTGAAATCTATATGCTCACATTTTCGGATTTTGATGCCAATTCGGATTAGGATAATCATGCAGGGAACTGCAAATCTAAATGTACGTTTCAAATTTTTGTTATCTGCAGGTTTTCTGTGAGTTTGATTGGGAATTAGATGAACTCGAGGTACAAGAAAATCTTCTTTTTAAGGAAATTTTTTCCCTAAGAGTTTTATCTTTATGCTCTGTTTTCACGTATCTTCAGGAATTCACGGATAAGTTGATTGAGGAGGAAGAATTACCGGAAAGTCAAAAGGATGCCTTCAAGGTAATAGTTTGTCAAGTGTTGTAGACATGTTACTGTTATTCATCTTTACAAAAGGCTTACCTGATGAGGGTTCTCTCCATTATTTAGGATTTTGTGAAGGAGAAAGTTAGAGAGGCCAAGAAAGCTAATAGATTGGTAAACATTGTTACTCATATTATGATGATTTTCTTGGTAAAAAGTAACCCATTGCGAACAGATCTTATTCGATGTTCTTTCAGGCTAGGGAAGCACGGAAAAAAGCCATTGAGGAAATGAGCAAAGAAACTAAGGAAGCGTTTGAGAAGATGAAATTTTATAAGTTTTACCCTGTACAAACACCTGATACGCCCGATATATCCAACGTTAAGGTATGTTAACTCTGGTTTAATCCTCTTGGCCGATGACGAGCGAAAAATGTTTGATCTTGAACTATATTTTTCGATAGACTTCGTTCTTATTTATCAACAACGGGTGCGAACTACGAACTATATAGCCTATAGGAAGATTAGAAGAGATTAGAAAGCTTCCCATTTCTTCCCAAGCCAAACTGATGGAAGAGGACCAAAGGCCTACTCCTTTTCAGCTGACATTCTCTAAATATTCTCCCTAGCTCTCGCACCTTGTTTCCAATACTCAGCGGCTTGATTGGAATCAACTCTTTCCCTTGTCCAGACGTTCGCCTTTCTCAGTCTTGGAAAGGTGACCCGTCGAAGACGGGAGCCCTTTAACATGTTTACAAATCCTCCTACTTATTAGAGAAAGAAAGGGGGTTCGATCACTGTTTTGTATAGGGTTGACTCTCACAGCTATAAATTCTTTGAGACGGGGAGAGTCTGAAGTTGAAAACTACTTTTTGCTTTGCTCTTTCGCTACTCACCCTTCTTCCACTCTGTCCTCGTCTTCTCCTTTGTTAGAATTCTAAATCTAATGATTAAGATAGACTATAGCTACGAATTTGGTACCTCTTAACTAACTTGTTATCCTAGTACTTGGCCACCTGCTCATTTGAGCTTCTTATACACATTTACAATCAAGCATGGATTGAACCCAGTGGTCTATAAGTGTCTATGCAAATAATTAATGATTCAAAGCGAAAGACTTAAAGCCACGACGATCACCTACTTAGGAGTTTTCACATGTAGTCGTTTTACAGCTAGGTTACCCGAACACTCGAAAATATTAATATACATAAATATCGATCTTCAAAGTATTTTCAAGGACCAGAAATCTGTAAACGTTTAAGATTTAAAAACCGTAACCAGTAATTTTCTTCTCACATGATCTTGCCTGCATTTTTTCCAATGTCCTCCAATATTTTGTTTTCTTGGCTTTCCAGGCTCCATTTATAAACAGGTATTATGGAAAGGCTCATGAAGTCCTGTGA ATGAGGAAAGGTACTAAGAGGAAGACAACACAGAAGGAAGAGGATAAACCTGCGGAACCTAAACCTGTGGAACCATCTCGCTCCAAGCGGACAAAGGTCCCCAAACCCGAATCCGAACCCCAGTACTTTGAGGACAAGCGCAACTTGGAAGATCTTTGGAAAGCAGCATTTCCTGTCGGGACAGAGTGGGATCAATTGGATACCGTTTATCAGTTCAACTGGAATTTCTCAAATCTAGAAGATGCATTTGAAGAGGGAGGAAAGTTGTATGGCGAGAAGGTTTACCTATTTGGTTGTACAGAGCCTCAATTGGTTCCTTTCAAGGGAGAAAATAAAGTTATATGCATACCTGTTGTGGTGGCTGTTGCATCTCCTTTCCCACCTTCTGATAAAATTGGCATCAACTCTGTTCAAAGAGAGGCTGAAGAGATAGTTCCCATGAAACAGATGAAAATGGACTGGGTTCCTTATATTCCCTTGGACCAAAGAGGTAGTCAAGTTGATAAGTTGAAATCTCAAATATTCATCCTCAGTTGCACTCAGAGAAGAGCTGGTTTGAAGCATTTGAAAATAGATCGTGTCAAGAAATTTGAGTATTGCTTACCCTATTTCTACCATCCCTTTAAGGAAGATGAAGTTGAACAAAGCACTGAGGTTCCAATTATCTTCCCAATCGACCCAAAGCCAGTTTTCTGTGAGTTTGATTGGGAATTAGATGAACTCGAGGAATTCACGGATAAGTTGATTGAGGAGGAAGAATTACCGGAAAGTCAAAAGGATGCCTTCAAGGATTTTGTGAAGGAGAAAGTTAGAGAGGCCAAGAAAGCTAATAGATTGGCTAGGGAAGCACGGAAAAAAGCCATTGAGGAAATGAGCAAAGAAACTAAGGAAGCGTTTGAGAAGATGAAATTTTATAAGTTTTACCCTGTACAAACACCTGATACGCCCGATATATCCAACGTTAAGGCTCCATTTATAAACAGGTATTATGGAAAGGCTCATGAAGTCCTGTGA ATGAGGAAAGGTACTAAGAGGAAGACAACACAGAAGGAAGAGGATAAACCTGCGGAACCTAAACCTGTGGAACCATCTCGCTCCAAGCGGACAAAGGTCCCCAAACCCGAATCCGAACCCCAGTACTTTGAGGACAAGCGCAACTTGGAAGATCTTTGGAAAGCAGCATTTCCTGTCGGGACAGAGTGGGATCAATTGGATACCGTTTATCAGTTCAACTGGAATTTCTCAAATCTAGAAGATGCATTTGAAGAGGGAGGAAAGTTGTATGGCGAGAAGGTTTACCTATTTGGTTGTACAGAGCCTCAATTGGTTCCTTTCAAGGGAGAAAATAAAGTTATATGCATACCTGTTGTGGTGGCTGTTGCATCTCCTTTCCCACCTTCTGATAAAATTGGCATCAACTCTGTTCAAAGAGAGGCTGAAGAGATAGTTCCCATGAAACAGATGAAAATGGACTGGGTTCCTTATATTCCCTTGGACCAAAGAGGTAGTCAAGTTGATAAGTTGAAATCTCAAATATTCATCCTCAGTTGCACTCAGAGAAGAGCTGGTTTGAAGCATTTGAAAATAGATCGTGTCAAGAAATTTGAGTATTGCTTACCCTATTTCTACCATCCCTTTAAGGAAGATGAAGTTGAACAAAGCACTGAGGTTCCAATTATCTTCCCAATCGACCCAAAGCCAGTTTTCTGTGAGTTTGATTGGGAATTAGATGAACTCGAGGAATTCACGGATAAGTTGATTGAGGAGGAAGAATTACCGGAAAGTCAAAAGGATGCCTTCAAGGATTTTGTGAAGGAGAAAGTTAGAGAGGCCAAGAAAGCTAATAGATTGGCTAGGGAAGCACGGAAAAAAGCCATTGAGGAAATGAGCAAAGAAACTAAGGAAGCGTTTGAGAAGATGAAATTTTATAAGTTTTACCCTGTACAAACACCTGATACGCCCGATATATCCAACGTTAAGGCTCCATTTATAAACAGGTATTATGGAAAGGCTCATGAAGTCCTGTGA MRKGTKRKTTQKEEDKPAEPKPVEPSRSKRTKVPKPESEPQYFEDKRNLEDLWKAAFPVGTEWDQLDTVYQFNWNFSNLEDAFEEGGKLYGEKVYLFGCTEPQLVPFKGENKVICIPVVVAVASPFPPSDKIGINSVQREAEEIVPMKQMKMDWVPYIPLDQRGSQVDKLKSQIFILSCTQRRAGLKHLKIDRVKKFEYCLPYFYHPFKEDEVEQSTEVPIIFPIDPKPVFCEFDWELDELEEFTDKLIEEEELPESQKDAFKDFVKEKVREAKKANRLAREARKKAIEEMSKETKEAFEKMKFYKFYPVQTPDTPDISNVKAPFINRYYGKAHEVL Homology
BLAST of Csor.00g172680 vs. ExPASy Swiss-Prot
Match: A2RVJ8 (Protein HEAT INTOLERANT 4 OS=Arabidopsis thaliana OX=3702 GN=HIT4 PE=1 SV=1) HSP 1 Score: 481.1 bits (1237), Expect = 1.0e-134 Identity = 230/336 (68.45%), Postives = 284/336 (84.52%), Query Frame = 0
BLAST of Csor.00g172680 vs. NCBI nr
Match: XP_022929550.1 (protein HEAT INTOLERANT 4-like [Cucurbita moschata] >KAG6577261.1 Protein HEAT INTOLERANT 4, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 675 bits (1741), Expect = 1.03e-244 Identity = 337/337 (100.00%), Postives = 337/337 (100.00%), Query Frame = 0
BLAST of Csor.00g172680 vs. NCBI nr
Match: XP_023551830.1 (protein HEAT INTOLERANT 4-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 674 bits (1738), Expect = 2.95e-244 Identity = 336/337 (99.70%), Postives = 337/337 (100.00%), Query Frame = 0
BLAST of Csor.00g172680 vs. NCBI nr
Match: XP_022985027.1 (protein HEAT INTOLERANT 4-like [Cucurbita maxima]) HSP 1 Score: 667 bits (1722), Expect = 8.10e-242 Identity = 334/337 (99.11%), Postives = 335/337 (99.41%), Query Frame = 0
BLAST of Csor.00g172680 vs. NCBI nr
Match: KAG7015350.1 (hypothetical protein SDJN02_22985 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 642 bits (1657), Expect = 4.51e-232 Identity = 326/337 (96.74%), Postives = 327/337 (97.03%), Query Frame = 0
BLAST of Csor.00g172680 vs. NCBI nr
Match: XP_022136810.1 (uncharacterized protein LOC111008415 [Momordica charantia]) HSP 1 Score: 629 bits (1622), Expect = 1.47e-226 Identity = 316/338 (93.49%), Postives = 324/338 (95.86%), Query Frame = 0
BLAST of Csor.00g172680 vs. ExPASy TrEMBL
Match: A0A6J1EUP5 (protein HEAT INTOLERANT 4-like OS=Cucurbita moschata OX=3662 GN=LOC111436085 PE=4 SV=1) HSP 1 Score: 675 bits (1741), Expect = 4.98e-245 Identity = 337/337 (100.00%), Postives = 337/337 (100.00%), Query Frame = 0
BLAST of Csor.00g172680 vs. ExPASy TrEMBL
Match: A0A6J1J3R5 (protein HEAT INTOLERANT 4-like OS=Cucurbita maxima OX=3661 GN=LOC111483118 PE=4 SV=1) HSP 1 Score: 667 bits (1722), Expect = 3.92e-242 Identity = 334/337 (99.11%), Postives = 335/337 (99.41%), Query Frame = 0
BLAST of Csor.00g172680 vs. ExPASy TrEMBL
Match: A0A6J1C502 (uncharacterized protein LOC111008415 OS=Momordica charantia OX=3673 GN=LOC111008415 PE=4 SV=1) HSP 1 Score: 629 bits (1622), Expect = 7.11e-227 Identity = 316/338 (93.49%), Postives = 324/338 (95.86%), Query Frame = 0
BLAST of Csor.00g172680 vs. ExPASy TrEMBL
Match: A0A0A0KUL7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G037620 PE=4 SV=1) HSP 1 Score: 622 bits (1604), Expect = 3.94e-224 Identity = 308/338 (91.12%), Postives = 325/338 (96.15%), Query Frame = 0
BLAST of Csor.00g172680 vs. ExPASy TrEMBL
Match: A0A6J1IV15 (protein HEAT INTOLERANT 4-like OS=Cucurbita maxima OX=3661 GN=LOC111480844 PE=4 SV=1) HSP 1 Score: 619 bits (1596), Expect = 6.52e-223 Identity = 310/338 (91.72%), Postives = 323/338 (95.56%), Query Frame = 0
BLAST of Csor.00g172680 vs. TAIR 10
Match: AT5G10010.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: nucleolus; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G64910.1); Has 33260 Blast hits to 16857 proteins in 1270 species: Archae - 88; Bacteria - 3040; Metazoa - 11915; Fungi - 3137; Plants - 1371; Viruses - 424; Other Eukaryotes - 13285 (source: NCBI BLink). ) HSP 1 Score: 481.1 bits (1237), Expect = 7.3e-136 Identity = 230/336 (68.45%), Postives = 284/336 (84.52%), Query Frame = 0
BLAST of Csor.00g172680 vs. TAIR 10
Match: AT5G64910.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G10010.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). ) HSP 1 Score: 346.3 bits (887), Expect = 2.8e-95 Identity = 182/323 (56.35%), Postives = 234/323 (72.45%), Query Frame = 0
BLAST of Csor.00g172680 vs. TAIR 10
Match: AT5G64910.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G10010.1). ) HSP 1 Score: 339.7 bits (870), Expect = 2.6e-93 Identity = 181/323 (56.04%), Postives = 233/323 (72.14%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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