Carg12217 (gene) Silver-seed gourd (SMH-JMG-627) v2

InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25
Position :
0
Zoom :
x 1
ATGTCGGTGATAAGTCCATCTTCTATCAGCAATGTTTCACTTGTTCCTATAGCCTCCTATACTAGGAAGAGCAATAGTTCAACAAGATTCAGCTTTTCTAGAAAACCCACTAAACATACACTTCATAGCCAAGGATTTCTTTTGCCCCTATCAAGTTCAGTTAGGCTGTTTCCAAATTGCAGTAAAAACTTTTTTTGTAATCATGGCCGTAGAATCCCAATACTTTCTGCCACAGGAACCGATGTGTCAGTGGAAGAATCAGACTCACCGGTTCCTGGTGAAGAATTAAATCGTAGCTCAGAACTTTCTTCCGCAATTGCAACAAATGAAAAGGACCCTGTTAAATCAGATGCTGGTACTGCTGCTCCTACTCAGTCAAAACGTTCGAGACCTGTGAGGAAGAGCGAGATGCCAGCTGTAAATAATGAGGAACTCATTCCTGGTGCAACTTTTACTGGGAAAGTGAGATCAATTCAACCATTTGGTGCCTTTGTTGATTTTGGCGCATTCACTGATGGCTTAGTACATGTATCAAGGTTGAGTGATAGCTTTGTTAAAGATGTTGCAAGCGTTGTTTCAGTCGGACAAGAGGTGAAAGTAAGATTGATTGAAGCAAACGCTGAAACTGGACGAATTTCTCTATCAATGCGTGAAAGTGATGAAAGGAAGGAATCTTCTGCTACCAATGATAAACCTGCGCCTGGCAGAAAGACCTCTCCAAAAGCTAGAGGACCTAAGAGGGATGGGGTGCAGAAGAGCTCAAAGTTTGTGAAGGGGCAAGATTTGCAGGGGACAGTGAAAAATATTACTAGGTCCGGTGCCTTCATATCTCTTCCCGAGGGAGAGGAAGGATTCCTCCCCAATTCTGAGGAAGCCTTTGAAGGATTTGGGAATCTTATGGGAGGCTCTACATTAGAAATTGGCCAAGAGGTTGATGTTAGGGTGTTGCGGATTGCAAGAGGACAGGTAACTTTGACCATGAAAAAAGAAGAAGACAATCAAACATCGGACTCTCAGGTCAGTCAAGGGAAAGTTTTTGCTGCAACAAACCCCTTCTTGTTAGCGTTTCGTAAGAACAAAGATATTGCTACATTTTTAGATGAGAGGGAAAACGTAAAGGAAGTGGCTACAAAATCTGTGGTTCAGAAGGTTACAGAAATAGTAGAAGGAATAGTTGATGCAGATCAGACCGTAGCTGATGATTCCACCGAAGCGATAGATGAGGCAATAAGTGATGATAAGGAGGAGGAAAGTCTGCCTTCTATAGTTGACGAAGCAGTTGAAGTTGATGAGCCTGCAAGTTCAGCTGATTCATCTGCTGTGACTCAAGATGACTCGGAAAGCATATTATCTACTTCAGAACACATTGTGGATGATGTAGTTGATGCGGAGGATAAAGAAGCTGAGCAAAGTCCTGAAACAAAGGCTTCTGATGACAACCAATTAGCGATAGAGCAAGCGGCTGATAAGCCTGAAGTGTTAGATGACCCATCATCTGATGCTTTGATCACTCAAGATGAAGGAGAAAGCACAATATCTCGTTCGGAAAATATTGTGGATAGTGTAACTGATACGACTGAGAAAGAAGCAGGGGGAAGTTCTGAAGTAAAGGCTTCAGAAGACGAGCAACCAGAAGAAGTCCAGGTGGTTGAGGCTGCTCAACCGATCAATAGACCAGAGACTGATGAGAAAGTAATCGCCCCTGATGATGAAACCAACAATTTAGTCTCTTCAGAAAGTCCAGTTAGTGAAGATAGTGTTGTTACGGAGAAAGAAAGTGAGGAAAGCCAAGAAAAATTGGAAAACGAAATTGTTTCTGCTTCTTCATCTGAAAAAGAAGGGGATAAACCAGAATCTGATTCAAATGGTAGCATCACGAACTTAGGTCAATCTAGTGAAGAAGTTGCTGAGAATCCAGTTGATATCCAGGCACCTGCTGAAAACCCTGAAGTTCTCTCCTCTACACCAGTTACAGAAGAAAAGATAGAAGCCTCTCCTGAAGTTGCATCAAAAGCTGTGATATCGCCAGCTTTGGTAAAGCAGCTTCGTGATGAAACAGGAGCAGGAATGATGGATTGCAAAAAAGCTTTGGCGGAGAGTGGAGGCGACATTGCTAAAGCTCAAGAGTTCCTGCGAAAGAAAGGTTTAGCAAGTGCAGAAAAGAAAGCTAGTAGAGCCACAGCTGAAGGAAGAATAGGTTCCTACATTCATGATGGTAGGATTGGTGTTTTAATAGAAGTGAACTGTGAAACAGATTTCGTCTCGAGAGGAGATATCTTCAAGGAGTTGGTTGATGATTTGGCCATGCAAGTTGCCGCATGTCCTCAAGTACAATATGTGATGACTGAAGATGTGCCAGAAGAGATGGTAAACAAAGAAAGAGAGGTTGAGATGCAGAAGGAAGATCTTTTATCAAAACCCGAGCAGATGAGGTCAAGAATCGTCGAAGGGCGGATAGGGAAGAGACTTGAGGAGTTGGCATTGCTTGAACAACCATACATCAAGAATGATAAGGTGGTGCTAAAGGACTGGGTGAAACAAACTATTGCAACCATTGGAGAAAACATTAAGGTTAAGAGATTTGTGAGATTCAATCTTGGAGAAGGCTTGGAAAAGAAAAGCCAAGATTTTGCTGCTGAGGTGGCTGCACAGACAGCAGCTAAACCTGCTGTAACTACACCAGTAGAAGAGGAGAAGCCCGGTGTAGACGAAGCAAAAGAAACTGTTCCCAAGACTGCAGCTGTTGCCGTTCCCGCTGCCCTTGTTAAAAAACTCCGAGAAGAAACCGGAGCAGGGATGATGGACTGTAAGAAAGCCCTCTCTGAAACTGGTGGGGATCTAGAGAAGGCACAAGAGTACCTGAGAAAGAAAGGCCTCTCGAGCGCTGATAAGAAATCTAGTCGTCTGGCAGCTGAAGGAAGAATTGGATCCTACATTCATGACTCCCGTATTGGTGTTCTAATTGAAGTGAACTGTGAAACTGACTTCGTGGGGAGAAACGAAAGATTCAAAGAGTTGGTCGACGACCTTGCAATGCAGATCGTGGCATGCCCAGAGGTGCAATATGTGTCAATGGAGGACATCCCAGAAAGCATTGTCAAAAAAGAAAGAGAGATTGAATTGCAGAGGGAAGACCTTCAGAAAAAACCAGAGAACATTAGGGAGAAAATCGTCGATGGACGGATTTCCAAGAGGCTTGGAGAACTTGTGCTTCTAGAACAACCTTTCATCAAGGATGATAGCATTTTGGTGAAGGATTTGGTAAAGCAAACTGTTGCTTCTCTTGGTGAGAACATAAAAGTTCGACGATTCGTTCGTTTCACCATTGGCGAGACAGTTGCAGATTCGAATGAATGAAGCTAAACAGGGTACCAAGCATGGAGAGTGAAGCTAGACATGGGGCCATTGTAACAGTACAGAAGAATATGAAGCTAAGGGTAAAACTATTTTTATGGAAAGAAACTTGAATATTCATTTTCCTCTCTTTTTTTGGTAGGGAAGAGTTGAGTTTACTAAAGCTGCTTTGTAGCATTTTGTTCTGAGAGATGATAAAAGCTTCATTCATATTATTCTCTGTATTTTGACTAATTGATATGAATGATCATATTCATC500100015002000250030003500Expect = 1.0E-22 / Score = 91.5Expect = 3.6E-11 / Score = 53.1Expect = 3.1E-16 / Score = 59.5Expect = 2.1E-6 / Score = 28.0Score = 21.91102Score = 16.308868Expect = 7.8E-24 / Score = 85.3Expect = 1.2E-47 / Score = 163.1Expect = 2.7E-50 / Score = 171.7Expect = 1.3E-12 / Score = 49.4Expect = 5.9E-24 / Score = 85.7Expect = 4.8E-24 / Score = 86.0Score = Score = Score = Score = Score = Score = Score = Score = Score = Score = Score = Expect = 7.35711E-17 / Score = 72.8102Expect = 5.17939E-17 / Score = 73.5806Expect = 7.3E-30 / Score = 104.1Expect = 1.7E-31 / Score = 109.5Expect = 2.7E-50 / Score = 171.7Expect = 1.2E-47 / Score = 163.1Score = Score = Expect = 3.7E-33 / Score = 112.9Expect = 1.6E-36 / Score = 124.0Score = Score = Score = Score = 39.839378Score = 37.137863Score = Score = Score = Score = Score = Score = Score = SequenceSM00316PF00575PS50126PS50126G3DSA:2.40.50.140G3DSA:1.10.286.20G3DSA:2.40.50.140G3DSA:1.10.8.10mobidb-litemobidb-litemobidb-litemobidb-litemobidb-litemobidb-litemobidb-litemobidb-litemobidb-litemobidb-litemobidb-litecd14275cd14275PF00889G3DSA:3.30.479.20G3DSA:3.30.479.20SSF54713SSF54713TIGR00116PTHR11741MF_00050MF_00050PS01127PS01126PS01126SSF50249SSF50249SSF46934SSF46934
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR022967RNA-binding domain, S1SMARTSM00316S1_6coord: 257..328
e-value: 3.6E-11
score: 53.1
coord: 146..217
e-value: 1.0E-22
score: 91.5
IPR003029S1 domainPFAMPF00575S1coord: 257..319
e-value: 2.1E-6
score: 28.0
coord: 147..217
e-value: 3.1E-16
score: 59.5
IPR003029S1 domainPROSITEPS50126S1coord: 148..217
score: 21.91102
IPR003029S1 domainPROSITEPS50126S1coord: 259..328
score: 16.308868
NoneNo IPR availableGENE3D2.40.50.140coord: 134..222
e-value: 7.8E-24
score: 85.3
NoneNo IPR availableGENE3D1.10.286.20coord: 1025..1069
e-value: 2.7E-50
score: 171.7
coord: 782..826
e-value: 1.2E-47
score: 163.1
NoneNo IPR availableGENE3D2.40.50.140coord: 254..337
e-value: 1.3E-12
score: 49.4
NoneNo IPR availableGENE3D1.10.8.10coord: 672..725
e-value: 5.9E-24
score: 85.7
coord: 915..969
e-value: 4.8E-24
score: 86.0
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 585..619
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 80..141
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 214..230
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 435..450
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 620..637
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 503..529
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 213..257
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 430..664
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 457..474
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 93..110
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 530..544
NoneNo IPR availableCDDcd14275UBA_EF-Tscoord: 923..956
e-value: 7.35711E-17
score: 72.8102
NoneNo IPR availableCDDcd14275UBA_EF-Tscoord: 677..713
e-value: 5.17939E-17
score: 73.5806
IPR014039Translation elongation factor EFTs/EF1B, dimerisationPFAMPF00889EF_TScoord: 726..868
e-value: 7.3E-30
score: 104.1
coord: 969..1111
e-value: 1.7E-31
score: 109.5
IPR036402Elongation factor Ts, dimerisation domain superfamilyGENE3D3.30.479.20Elongation factor Ts, dimerisation domaincoord: 973..1110
e-value: 2.7E-50
score: 171.7
IPR036402Elongation factor Ts, dimerisation domain superfamilyGENE3D3.30.479.20Elongation factor Ts, dimerisation domaincoord: 730..867
e-value: 1.2E-47
score: 163.1
IPR036402Elongation factor Ts, dimerisation domain superfamilySUPERFAMILY54713Elongation factor Ts (EF-Ts), dimerisation domaincoord: 970..1111
IPR036402Elongation factor Ts, dimerisation domain superfamilySUPERFAMILY54713Elongation factor Ts (EF-Ts), dimerisation domaincoord: 727..868
IPR001816Translation elongation factor EFTs/EF1BTIGRFAMTIGR00116TIGR00116coord: 673..766
e-value: 3.7E-33
score: 112.9
coord: 916..1016
e-value: 1.6E-36
score: 124.0
IPR001816Translation elongation factor EFTs/EF1BPANTHERPTHR11741ELONGATION FACTOR TScoord: 916..1114
coord: 290..889
coord: 119..278
IPR001816Translation elongation factor EFTs/EF1BHAMAPMF_00050EF_Tscoord: 672..885
score: 39.839378
IPR001816Translation elongation factor EFTs/EF1BHAMAPMF_00050EF_Tscoord: 916..1118
score: 37.137863
IPR018101Translation elongation factor Ts, conserved sitePROSITEPS01127EF_TS_2coord: 746..756
IPR018101Translation elongation factor Ts, conserved sitePROSITEPS01126EF_TS_1coord: 925..940
IPR018101Translation elongation factor Ts, conserved sitePROSITEPS01126EF_TS_1coord: 682..697
IPR012340Nucleic acid-binding, OB-foldSUPERFAMILY50249Nucleic acid-binding proteinscoord: 138..228
IPR012340Nucleic acid-binding, OB-foldSUPERFAMILY50249Nucleic acid-binding proteinscoord: 247..334
IPR009060UBA-like superfamilySUPERFAMILY46934UBA-likecoord: 918..968
IPR009060UBA-like superfamilySUPERFAMILY46934UBA-likecoord: 674..725