Carg12964 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg12964
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	Growth-regulating factor
Location	Carg_Chr10: 3535618 .. 3537000 (-)
RNA-Seq Expression	Carg12964
Synteny	Carg12964

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGCGCTAGAAGTATGTTTCCCTTCACCTCAGCTCAGTGGCAGGAGCTTGAAAATCAAGCTCTCGTCTTCAAATACATGGTTTCTGGTGTTCCTATACCTCCTGATCTCCTTTTCAGTATTAAAAGAAGTACCTTGGAGTCTCCTTTCACTTCTAAGCTCTTCCCACACCATTCTCAACATGGTATATCAACATCTCTCTCTCTCTCTCTCTTACTTTCTCTTTCTCTCTCTGAAATGTTTGTGTTTCATGCAGTTGGATGGAACTGTTTGCAGATGAGTTTGGGGAGGAAGATAGACCCAGAACCAGGGAGGTGCAGGAGAACTGATGGGAAAAAGTGGAGATGCTCAAAAGAGGCGTACCCAGATTCGAAATACTGTGAGAGGCACATGCATAGAGGCAAGAATCGTTCAAGAAAGCCTGTGGATGTTCTGAAAACAACAGCAACAAACGAGTTAAACCACCTCTCAAGTCAAGCATTTTCTTCCTTAAATAAGAACTCATCCTTACACTCCTATCGGCCCTTCCCCGCTCCTCAAATGTCTTCAAATCCTAATGGGAATGGCATATCAACCAAAGATACCAATACCCTCTTGCTTCTGGATCCTGGTTCTTACTCGGACAGAGGCCCAGATTACAGGTTTGAAGAATATTATCCCCTCTCTTCGGAGGTGGAGTTCTAATATTTCATAGTCAGATTCTGACATTTGTCCATCTTCTGTAGGTACACTTATGGGCTAAAAGAGGAAGTGGATGAGCATGTTTTCTTTTCGCAAGAACCATCTGAAGCTACTGCGAGAGCTGATTTCTCTGCTTCTTCCACCGTTGATTCTCTGCAATTGACACCACTAACGATGAGTTGTTCTTCTCTATACCCAAAACAAAACAACTTCTCCTCTTTGCAGAGTGGTCAATCATGTTATCAGCTTCATCAGAGCCTCACAGACCCTTTAAAGCAACAAAAGAGAGAGGAATCGCAGAAGAAAGTTCACCGATTCTTCGATGAATGGCCTCAAAAAGAAGGAGGATCATGGCTTGATTTTAACGATAAATCGTCAAATATTGGCTCAGTCTCCACCACTCGGCTCTCAATTTCCATTCCCACCGCTTCCAACGAACTCCCCATTTTCAGATCCAAAAACCCATAATGATACCTATCCCCAAACTCCCAATTTTTTTTCTTTAATCTTGTTCTTTCTCTGAAGTCAGTTTGTTCCTGTGCTTGATCTCCAGGGTGACCCTAGCTGTTCCTTATTGAATTTTGTTTTGTTCCTAAGGATGTACTTCCTGCTGAGTTTCACCCCTTCTTTTTTCTTAGGTAGGGTGTGGTTGAATTGGGCCATGGGTTGTTTATTAAACGAATGTTCCATCTTTTTTCCTGT

mRNA sequence

ATGAGCGCTAGAAGTATGTTTCCCTTCACCTCAGCTCAGTGGCAGGAGCTTGAAAATCAAGCTCTCGTCTTCAAATACATGGTTTCTGGTGTTCCTATACCTCCTGATCTCCTTTTCAGTATTAAAAGAAGTACCTTGGAGTCTCCTTTCACTTCTAAGCTCTTCCCACACCATTCTCAACATGTTGGATGGAACTGTTTGCAGATGAGTTTGGGGAGGAAGATAGACCCAGAACCAGGGAGGTGCAGGAGAACTGATGGGAAAAAGTGGAGATGCTCAAAAGAGGCGTACCCAGATTCGAAATACTGTGAGAGGCACATGCATAGAGGCAAGAATCGTTCAAGAAAGCCTGTGGATGTTCTGAAAACAACAGCAACAAACGAGTTAAACCACCTCTCAAGTCAAGCATTTTCTTCCTTAAATAAGAACTCATCCTTACACTCCTATCGGCCCTTCCCCGCTCCTCAAATGTCTTCAAATCCTAATGGGAATGGCATATCAACCAAAGATACCAATACCCTCTTGCTTCTGGATCCTGGTTCTTACTCGGACAGAGGCCCAGATTACAGGTACACTTATGGGCTAAAAGAGGAAGTGGATGAGCATGTTTTCTTTTCGCAAGAACCATCTGAAGCTACTGCGAGAGCTGATTTCTCTGCTTCTTCCACCGTTGATTCTCTGCAATTGACACCACTAACGATGAGTTGTTCTTCTCTATACCCAAAACAAAACAACTTCTCCTCTTTGCAGAGTGGTCAATCATGTTATCAGCTTCATCAGAGCCTCACAGACCCTTTAAAGCAACAAAAGAGAGAGGAATCGCAGAAGAAAGTTCACCGATTCTTCGATGAATGGCCTCAAAAAGAAGGAGGATCATGGCTTGATTTTAACGATAAATCGTCAAATATTGGCTCAGTCTCCACCACTCGGCTCTCAATTTCCATTCCCACCGCTTCCAACGAACTCCCCATTTTCAGATCCAAAAACCCATAATGATACCTATCCCCAAACTCCCAATTTTTTTTCTTTAATCTTGTTCTTTCTCTGAAGTCAGTTTGTTCCTGTGCTTGATCTCCAGGGTGACCCTAGCTGTTCCTTATTGAATTTTGTTTTGTTCCTAAGGATGTACTTCCTGCTGAGTTTCACCCCTTCTTTTTTCTTAGGTAGGGTGTGGTTGAATTGGGCCATGGGTTGTTTATTAAACGAATGTTCCATCTTTTTTCCTGT

Coding sequence (CDS)

ATGAGCGCTAGAAGTATGTTTCCCTTCACCTCAGCTCAGTGGCAGGAGCTTGAAAATCAAGCTCTCGTCTTCAAATACATGGTTTCTGGTGTTCCTATACCTCCTGATCTCCTTTTCAGTATTAAAAGAAGTACCTTGGAGTCTCCTTTCACTTCTAAGCTCTTCCCACACCATTCTCAACATGTTGGATGGAACTGTTTGCAGATGAGTTTGGGGAGGAAGATAGACCCAGAACCAGGGAGGTGCAGGAGAACTGATGGGAAAAAGTGGAGATGCTCAAAAGAGGCGTACCCAGATTCGAAATACTGTGAGAGGCACATGCATAGAGGCAAGAATCGTTCAAGAAAGCCTGTGGATGTTCTGAAAACAACAGCAACAAACGAGTTAAACCACCTCTCAAGTCAAGCATTTTCTTCCTTAAATAAGAACTCATCCTTACACTCCTATCGGCCCTTCCCCGCTCCTCAAATGTCTTCAAATCCTAATGGGAATGGCATATCAACCAAAGATACCAATACCCTCTTGCTTCTGGATCCTGGTTCTTACTCGGACAGAGGCCCAGATTACAGGTACACTTATGGGCTAAAAGAGGAAGTGGATGAGCATGTTTTCTTTTCGCAAGAACCATCTGAAGCTACTGCGAGAGCTGATTTCTCTGCTTCTTCCACCGTTGATTCTCTGCAATTGACACCACTAACGATGAGTTGTTCTTCTCTATACCCAAAACAAAACAACTTCTCCTCTTTGCAGAGTGGTCAATCATGTTATCAGCTTCATCAGAGCCTCACAGACCCTTTAAAGCAACAAAAGAGAGAGGAATCGCAGAAGAAAGTTCACCGATTCTTCGATGAATGGCCTCAAAAAGAAGGAGGATCATGGCTTGATTTTAACGATAAATCGTCAAATATTGGCTCAGTCTCCACCACTCGGCTCTCAATTTCCATTCCCACCGCTTCCAACGAACTCCCCATTTTCAGATCCAAAAACCCATAA

Protein sequence

MSARSMFPFTSAQWQELENQALVFKYMVSGVPIPPDLLFSIKRSTLESPFTSKLFPHHSQHVGWNCLQMSLGRKIDPEPGRCRRTDGKKWRCSKEAYPDSKYCERHMHRGKNRSRKPVDVLKTTATNELNHLSSQAFSSLNKNSSLHSYRPFPAPQMSSNPNGNGISTKDTNTLLLLDPGSYSDRGPDYRYTYGLKEEVDEHVFFSQEPSEATARADFSASSTVDSLQLTPLTMSCSSLYPKQNNFSSLQSGQSCYQLHQSLTDPLKQQKREESQKKVHRFFDEWPQKEGGSWLDFNDKSSNIGSVSTTRLSISIPTASNELPIFRSKNP

Homology

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BLAST of Carg12964 vs. NCBI nr
Match: KAG7023693.1 (Growth-regulating factor 5, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 666.8 bits (1719), Expect = 9.9e-188
Identity = 330/330 (100.00%), Postives = 330/330 (100.00%), Query Frame = 0


Query: 1   MSARSMFPFTSAQWQELENQALVFKYMVSGVPIPPDLLFSIKRSTLESPFTSKLFPHHSQ 60
           MSARSMFPFTSAQWQELENQALVFKYMVSGVPIPPDLLFSIKRSTLESPFTSKLFPHHSQ
Sbjct: 1   MSARSMFPFTSAQWQELENQALVFKYMVSGVPIPPDLLFSIKRSTLESPFTSKLFPHHSQ 60

Query: 61  HVGWNCLQMSLGRKIDPEPGRCRRTDGKKWRCSKEAYPDSKYCERHMHRGKNRSRKPVDV 120
           HVGWNCLQMSLGRKIDPEPGRCRRTDGKKWRCSKEAYPDSKYCERHMHRGKNRSRKPVDV
Sbjct: 61  HVGWNCLQMSLGRKIDPEPGRCRRTDGKKWRCSKEAYPDSKYCERHMHRGKNRSRKPVDV 120

Query: 121 LKTTATNELNHLSSQAFSSLNKNSSLHSYRPFPAPQMSSNPNGNGISTKDTNTLLLLDPG 180
           LKTTATNELNHLSSQAFSSLNKNSSLHSYRPFPAPQMSSNPNGNGISTKDTNTLLLLDPG
Sbjct: 121 LKTTATNELNHLSSQAFSSLNKNSSLHSYRPFPAPQMSSNPNGNGISTKDTNTLLLLDPG 180

Query: 181 SYSDRGPDYRYTYGLKEEVDEHVFFSQEPSEATARADFSASSTVDSLQLTPLTMSCSSLY 240
           SYSDRGPDYRYTYGLKEEVDEHVFFSQEPSEATARADFSASSTVDSLQLTPLTMSCSSLY
Sbjct: 181 SYSDRGPDYRYTYGLKEEVDEHVFFSQEPSEATARADFSASSTVDSLQLTPLTMSCSSLY 240

Query: 241 PKQNNFSSLQSGQSCYQLHQSLTDPLKQQKREESQKKVHRFFDEWPQKEGGSWLDFNDKS 300
           PKQNNFSSLQSGQSCYQLHQSLTDPLKQQKREESQKKVHRFFDEWPQKEGGSWLDFNDKS
Sbjct: 241 PKQNNFSSLQSGQSCYQLHQSLTDPLKQQKREESQKKVHRFFDEWPQKEGGSWLDFNDKS 300

Query: 301 SNIGSVSTTRLSISIPTASNELPIFRSKNP 331
           SNIGSVSTTRLSISIPTASNELPIFRSKNP
Sbjct: 301 SNIGSVSTTRLSISIPTASNELPIFRSKNP 330

[Close]

BLAST of Carg12964 vs. NCBI nr
Match: XP_022961217.1 (growth-regulating factor 6-like isoform X2 [Cucurbita moschata])

HSP 1 Score: 660.6 bits (1703), Expect = 7.1e-186
Identity = 329/330 (99.70%), Postives = 329/330 (99.70%), Query Frame = 0


Query: 1   MSARSMFPFTSAQWQELENQALVFKYMVSGVPIPPDLLFSIKRSTLESPFTSKLFPHHSQ 60
           MSARSMFPFTSAQWQELENQALVFKYMVSGVPIPPDLLFSIKRSTLESPFTSKLFPHHSQ
Sbjct: 1   MSARSMFPFTSAQWQELENQALVFKYMVSGVPIPPDLLFSIKRSTLESPFTSKLFPHHSQ 60

Query: 61  HVGWNCLQMSLGRKIDPEPGRCRRTDGKKWRCSKEAYPDSKYCERHMHRGKNRSRKPVDV 120
           HVGWNCLQMSLGRKIDPEPGRCRRTDGKKWRCSKEAYPDSKYCERHMHRGKNRSRKPVDV
Sbjct: 61  HVGWNCLQMSLGRKIDPEPGRCRRTDGKKWRCSKEAYPDSKYCERHMHRGKNRSRKPVDV 120

Query: 121 LKTTATNELNHLSSQAFSSLNKNSSLHSYRPFPAPQMSSNPNGNGISTKDTNTLLLLDPG 180
           LKTTATNELNHLSSQAFSSLNKNSSLHSYRPFPAPQMSSNPNGNGISTKDTNTLLLLDPG
Sbjct: 121 LKTTATNELNHLSSQAFSSLNKNSSLHSYRPFPAPQMSSNPNGNGISTKDTNTLLLLDPG 180

Query: 181 SYSDRGPDYRYTYGLKEEVDEHVFFSQEPSEATARADFSASSTVDSLQLTPLTMSCSSLY 240
           SYSDRGPDYRYTYGLKEEVDEHVFFSQEPSEATARADFSASSTVDSLQLTPLTMSCSSLY
Sbjct: 181 SYSDRGPDYRYTYGLKEEVDEHVFFSQEPSEATARADFSASSTVDSLQLTPLTMSCSSLY 240

Query: 241 PKQNNFSSLQSGQSCYQLHQSLTDPLKQQKREESQKKVHRFFDEWPQKEGGSWLDFNDKS 300
           PKQNNFSSLQSGQSCYQLHQSLTDPLKQQKREESQKKVHRFFDEWPQK GGSWLDFNDKS
Sbjct: 241 PKQNNFSSLQSGQSCYQLHQSLTDPLKQQKREESQKKVHRFFDEWPQK-GGSWLDFNDKS 300

Query: 301 SNIGSVSTTRLSISIPTASNELPIFRSKNP 331
           SNIGSVSTTRLSISIPTASNELPIFRSKNP
Sbjct: 301 SNIGSVSTTRLSISIPTASNELPIFRSKNP 329

[Close]

BLAST of Carg12964 vs. NCBI nr
Match: XP_023516140.1 (growth-regulating factor 6-like isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 657.9 bits (1696), Expect = 4.6e-185
Identity = 326/330 (98.79%), Postives = 327/330 (99.09%), Query Frame = 0


Query: 1   MSARSMFPFTSAQWQELENQALVFKYMVSGVPIPPDLLFSIKRSTLESPFTSKLFPHHSQ 60
           MSARSMFPFTSAQWQELENQALVFKYMVSGVPIPPDLLFSIKRSTLESPFTSKLFPHHSQ
Sbjct: 1   MSARSMFPFTSAQWQELENQALVFKYMVSGVPIPPDLLFSIKRSTLESPFTSKLFPHHSQ 60

Query: 61  HVGWNCLQMSLGRKIDPEPGRCRRTDGKKWRCSKEAYPDSKYCERHMHRGKNRSRKPVDV 120
            VGWNCLQMSLGRKIDPEPGRCRRTDGKKWRCSKEAYPDSKYCERHMHRGKNRSRKPVDV
Sbjct: 61  QVGWNCLQMSLGRKIDPEPGRCRRTDGKKWRCSKEAYPDSKYCERHMHRGKNRSRKPVDV 120

Query: 121 LKTTATNELNHLSSQAFSSLNKNSSLHSYRPFPAPQMSSNPNGNGISTKDTNTLLLLDPG 180
           LKTTATNELNHLS+QAFSSLNKNSSLHSYRPFPAPQMSSNPNGNGISTKDTNTLLLLDPG
Sbjct: 121 LKTTATNELNHLSNQAFSSLNKNSSLHSYRPFPAPQMSSNPNGNGISTKDTNTLLLLDPG 180

Query: 181 SYSDRGPDYRYTYGLKEEVDEHVFFSQEPSEATARADFSASSTVDSLQLTPLTMSCSSLY 240
           SYSDR PDYRYTYGLKEEVDEHVFFSQEPSEATARADFSASSTVDSLQLTPLTMSCSSLY
Sbjct: 181 SYSDRSPDYRYTYGLKEEVDEHVFFSQEPSEATARADFSASSTVDSLQLTPLTMSCSSLY 240

Query: 241 PKQNNFSSLQSGQSCYQLHQSLTDPLKQQKREESQKKVHRFFDEWPQKEGGSWLDFNDKS 300
           PKQNNFSSLQSGQSCY LHQSLTDPLKQQKREESQKKVHRFFDEWPQKEGGSWLDFNDKS
Sbjct: 241 PKQNNFSSLQSGQSCYPLHQSLTDPLKQQKREESQKKVHRFFDEWPQKEGGSWLDFNDKS 300

Query: 301 SNIGSVSTTRLSISIPTASNELPIFRSKNP 331
           SNIGSVSTTRLSISIPTASNELPIFRSKNP
Sbjct: 301 SNIGSVSTTRLSISIPTASNELPIFRSKNP 330

[Close]

BLAST of Carg12964 vs. NCBI nr
Match: XP_022987294.1 (growth-regulating factor 6-like [Cucurbita maxima])

HSP 1 Score: 657.5 bits (1695), Expect = 6.0e-185
Identity = 326/330 (98.79%), Postives = 327/330 (99.09%), Query Frame = 0


Query: 1   MSARSMFPFTSAQWQELENQALVFKYMVSGVPIPPDLLFSIKRSTLESPFTSKLFPHHSQ 60
           MSARSMFPFTSAQWQELENQALVFKYMVSGVPIPPDLLFSIKRSTLESPFTSKLFPHHSQ
Sbjct: 1   MSARSMFPFTSAQWQELENQALVFKYMVSGVPIPPDLLFSIKRSTLESPFTSKLFPHHSQ 60

Query: 61  HVGWNCLQMSLGRKIDPEPGRCRRTDGKKWRCSKEAYPDSKYCERHMHRGKNRSRKPVDV 120
           HVGWNCLQMSLGRKIDPEPGRCRRTDGKKWRCSKEAYPDSKYCERHMHRGKNRSRKPVDV
Sbjct: 61  HVGWNCLQMSLGRKIDPEPGRCRRTDGKKWRCSKEAYPDSKYCERHMHRGKNRSRKPVDV 120

Query: 121 LKTTATNELNHLSSQAFSSLNKNSSLHSYRPFPAPQMSSNPNGNGISTKDTNTLLLLDPG 180
           LKTTATNELNHLS+QAFSSLNKNSSLHSYRPFPAPQMSSNPNGNGISTKDTNTLLLLD G
Sbjct: 121 LKTTATNELNHLSNQAFSSLNKNSSLHSYRPFPAPQMSSNPNGNGISTKDTNTLLLLDSG 180

Query: 181 SYSDRGPDYRYTYGLKEEVDEHVFFSQEPSEATARADFSASSTVDSLQLTPLTMSCSSLY 240
           SYSDR PDYRYTYGLKEEVDEHVFFSQEPSEATARADFSASSTVDSLQLTPLTMSCSSLY
Sbjct: 181 SYSDRSPDYRYTYGLKEEVDEHVFFSQEPSEATARADFSASSTVDSLQLTPLTMSCSSLY 240

Query: 241 PKQNNFSSLQSGQSCYQLHQSLTDPLKQQKREESQKKVHRFFDEWPQKEGGSWLDFNDKS 300
           PKQNNFSSLQSGQSCYQLHQSLTDPLKQQKREESQKKVHRFFDEWPQK GGSWLDFNDKS
Sbjct: 241 PKQNNFSSLQSGQSCYQLHQSLTDPLKQQKREESQKKVHRFFDEWPQKGGGSWLDFNDKS 300

Query: 301 SNIGSVSTTRLSISIPTASNELPIFRSKNP 331
           SNIGSVSTTRLSISIPTASNELPIFRSKNP
Sbjct: 301 SNIGSVSTTRLSISIPTASNELPIFRSKNP 330

[Close]

BLAST of Carg12964 vs. NCBI nr
Match: KAG6590031.1 (Growth-regulating factor 5, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 649.8 bits (1675), Expect = 1.2e-182
Identity = 323/325 (99.38%), Postives = 323/325 (99.38%), Query Frame = 0


Query: 6   MFPFTSAQWQELENQALVFKYMVSGVPIPPDLLFSIKRSTLESPFTSKLFPHHSQHVGWN 65
           MFPFTSAQWQELENQALVFKYMVSGVPIPPDLLFSIKRSTLESPFTSKLFPHHSQHVGWN
Sbjct: 1   MFPFTSAQWQELENQALVFKYMVSGVPIPPDLLFSIKRSTLESPFTSKLFPHHSQHVGWN 60

Query: 66  CLQMSLGRKIDPEPGRCRRTDGKKWRCSKEAYPDSKYCERHMHRGKNRSRKPVDVLKTTA 125
           CLQMSLGRKIDPEPGRCRRTDGKKWRCSKEAYPDSKYCERHMHRGKNRSRKPVDVLKTTA
Sbjct: 61  CLQMSLGRKIDPEPGRCRRTDGKKWRCSKEAYPDSKYCERHMHRGKNRSRKPVDVLKTTA 120

Query: 126 TNELNHLSSQAFSSLNKNSSLHSYRPFPAPQMSSNPNGNGISTKDTNTLLLLDPGSYSDR 185
           TNELNHLSSQAFSSLNKNSSLHSYRPFPAPQMSSNPNGNGISTKDTNTLLLLDPGSYSDR
Sbjct: 121 TNELNHLSSQAFSSLNKNSSLHSYRPFPAPQMSSNPNGNGISTKDTNTLLLLDPGSYSDR 180

Query: 186 GPDYRYTYGLKEEVDEHVFFSQEPSEATARADFSASSTVDSLQLTPLTMSCSSLYPKQNN 245
            PDYRYTYGLKEEVDEHVFFSQEPSEATARADFSASSTVDSLQLTPLTMSCSSLYPKQNN
Sbjct: 181 SPDYRYTYGLKEEVDEHVFFSQEPSEATARADFSASSTVDSLQLTPLTMSCSSLYPKQNN 240

Query: 246 FSSLQSGQSCYQLHQSLTDPLKQQKREESQKKVHRFFDEWPQKEGGSWLDFNDKSSNIGS 305
           FSSLQSGQSCYQLHQSLTDPLKQQKREESQKKVHRFFDEWPQK GGSWLDFNDKSSNIGS
Sbjct: 241 FSSLQSGQSCYQLHQSLTDPLKQQKREESQKKVHRFFDEWPQK-GGSWLDFNDKSSNIGS 300

Query: 306 VSTTRLSISIPTASNELPIFRSKNP 331
           VSTTRLSISIPTASNELPIFRSKNP
Sbjct: 301 VSTTRLSISIPTASNELPIFRSKNP 324

[Close]

BLAST of Carg12964 vs. ExPASy Swiss-Prot
Match: Q8L8A6 (Growth-regulating factor 5 OS=Arabidopsis thaliana OX=3702 GN=GRF5 PE=1 SV=1)

HSP 1 Score: 193.7 bits (491), Expect = 3.2e-48
Identity = 98/178 (55.06%), Postives = 127/178 (71.35%), Query Frame = 0


Query: 8   PFTSAQWQELENQALVFKYMVSGVPIPPDLLFSIKRSTLESPFTSKLFPHHSQHVGWNCL 67
           PFT  QW+ELE+QAL++KYMVSGVP+PP+L+FSI+RS L++   S+L PH  Q +GW C 
Sbjct: 16  PFTPTQWEELEHQALIYKYMVSGVPVPPELIFSIRRS-LDTSLVSRLLPH--QSLGWGCY 75

Query: 68  QMSLGRKIDPEPGRCRRTDGKKWRCSKEAYPDSKYCERHMHRGKNRSRKPVDVLKTTATN 127
           QM  GRK DPEPGRCRRTDGKKWRCS+EAYPDSKYCE+HMHRG+NR+RK +D  +TT T 
Sbjct: 76  QMGFGRKPDPEPGRCRRTDGKKWRCSREAYPDSKYCEKHMHRGRNRARKSLDQNQTTTT- 135

Query: 128 ELNHLSSQAFSSLNKNSSLHSYRPFPAPQMSSNPNGNGISTKDTNTLLLLDPGSYSDR 186
               L+S + S  N N+        P+P +SS+ + N  ST  + +   +D  S S+R
Sbjct: 136 ---PLTSPSLSFTNNNN--------PSPTLSSSSSSNSSSTTYSASSSSMDAYSNSNR 178

[Close]

BLAST of Carg12964 vs. ExPASy Swiss-Prot
Match: A2XA73 (Growth-regulating factor 1 OS=Oryza sativa subsp. indica OX=39946 GN=GRF1 PE=2 SV=1)

HSP 1 Score: 187.6 bits (475), Expect = 2.3e-46
Identity = 144/384 (37.50%), Postives = 183/384 (47.66%), Query Frame = 0


Query: 7   FPFTSAQWQELENQALVFKYMVSGVPIPPDLLFSIKRSTL------ESPFTSKLFPHHSQ 66
           +PFT++QWQELE+QAL++KYM SG PIP DL+  ++RS L       SP  S  FP    
Sbjct: 17  YPFTASQWQELEHQALIYKYMASGTPIPSDLILPLRRSFLLDSALATSP--SLAFPPQPS 76

Query: 67  HVGWNCLQMSLGRKI-DPEPGRCRRTDGKKWRCSKEAYPDSKYCERHMHRGKNRSRKPVD 126
            +GW C  M  GRK  DPEPGRCRRTDGKKWRCSKEAYPDSKYCE+HMHRGKNRSRKPV+
Sbjct: 77  -LGWGCFGMGFGRKAEDPEPGRCRRTDGKKWRCSKEAYPDSKYCEKHMHRGKNRSRKPVE 136

Query: 127 VLKTTATNELNHLSSQAFSS--------LNKNSSLHSY-RPFP--------------APQ 186
           +   T     +  +S A +S           +S   SY RP P              A  
Sbjct: 137 MSLATPPPPSSSATSAASNSSAGVAPTTTTTSSPAPSYSRPAPHDAAPYQALYGGPYAAA 196

Query: 187 MSSNPNGNGISTKDTNTLLLLD-------PGSYSDRGPDYRYTYGLKEEVDEHVFFSQEP 246
            +  P       + +   L +D       P  YS    +Y Y +  KE   EH FF    
Sbjct: 197 TARTPAAAAYHAQVSPFHLHIDTTHPHPPPSYYSMDHKEYAYGHATKEVHGEHAFF---- 256

Query: 247 SEATARADFSASSTVDSLQLTPLTM----SCSSLYP-----------------------K 306
           S+ T R    A++     Q   L M    S + L+P                       K
Sbjct: 257 SDGTEREHHHAAAGHGQWQFKQLGMEPKQSTTPLFPGAGYGHTAASPYAIDLSKEDDDEK 316

Query: 307 QNNFSSLQSGQSCYQLHQS--LTDPLKQQKREESQKKVHRFFDEWPQKEGGSWLDFNDKS 325
           +      Q  Q C+ L     L  P        +QK +  FFDEWP ++       N K 
Sbjct: 317 ERRQQQQQQQQHCFLLGADLRLEKPAGHDHAAAAQKPLRHFFDEWPHEK-------NSKG 376

[Close]

BLAST of Carg12964 vs. ExPASy Swiss-Prot
Match: Q6AWY8 (Growth-regulating factor 1 OS=Oryza sativa subsp. japonica OX=39947 GN=GRF1 PE=3 SV=1)

HSP 1 Score: 186.4 bits (472), Expect = 5.1e-46
Identity = 145/385 (37.66%), Postives = 187/385 (48.57%), Query Frame = 0


Query: 7   FPFTSAQWQELENQALVFKYMVSGVPIPPDLLFSIKRSTL------ESPFTSKLFPHHSQ 66
           +PFT++QWQELE+QAL++KYM SG PIP DL+  ++RS L       SP  S  FP    
Sbjct: 17  YPFTASQWQELEHQALIYKYMASGTPIPSDLILPLRRSFLLDSALATSP--SLAFPPQPS 76

Query: 67  HVGWNCLQMSLGRKI-DPEPGRCRRTDGKKWRCSKEAYPDSKYCERHMHRGKNRSRKPVD 126
            +GW C  M  GRK  DPEPGRCRRTDGKKWRCSKEAYPDSKYCE+HMHRGKNRSRKPV+
Sbjct: 77  -LGWGCFGMGFGRKAEDPEPGRCRRTDGKKWRCSKEAYPDSKYCEKHMHRGKNRSRKPVE 136

Query: 127 VLKTT-------ATNELNHLSS-QAFSSLNKNSSLHSY-RPFP--------------APQ 186
           +   T       AT+  ++ S+  A ++   +S   SY RP P              A  
Sbjct: 137 MSLATPPPPSSSATSAASNTSAGVAPTTTTTSSPAPSYSRPAPHDAAPYQALYGGPYAAA 196

Query: 187 MSSNPNGNGISTKDTNTLLLLD-------PGSYSDRGPDYRYTYGLKEEVDEHVFFSQEP 246
            +  P       + +   L LD       P  YS    +Y Y +  KE   EH FF    
Sbjct: 197 TARTPAAAAYHAQVSPFHLQLDTTHPHPPPSYYSMDHKEYAYGHATKEVHGEHAFF---- 256

Query: 247 SEATARADFSASSTVDSLQLTPLTM----SCSSLYP------------------------ 306
           S+ T R    A++     Q   L M    S + L+P                        
Sbjct: 257 SDGTEREHHHAAAGHGQWQFKQLGMEPKQSTTPLFPGAGYGHTAASPYAIDLSKEDDDEK 316

Query: 307 KQNNFSSLQSGQSCYQLHQS--LTDPLKQQKREESQKKVHRFFDEWPQKEGGSWLDFNDK 325
           ++      Q  Q C+ L     L  P        +QK +  FFDEWP ++       N K
Sbjct: 317 ERRQQQQQQQQQHCFLLGADLRLEKPAGHDHAAAAQKPLRHFFDEWPHEK-------NSK 376

[Close]

BLAST of Carg12964 vs. ExPASy Swiss-Prot
Match: Q6ZIK5 (Growth-regulating factor 4 OS=Oryza sativa subsp. japonica OX=39947 GN=GRF4 PE=1 SV=1)

HSP 1 Score: 176.0 bits (445), Expect = 6.9e-43
Identity = 134/351 (38.18%), Postives = 195/351 (55.56%), Query Frame = 0


Query: 2   SARSMFPFTSAQWQELENQALVFKYMVSGVPIPPDLLFSIKRSTLESPFTSKLFPHHSQH 61
           +A  + PFT+AQ++ELE QAL++KY+V+GVP+PPDL+  I+R  L+S   ++ + H +  
Sbjct: 58  AAARLPPFTAAQYEELEQQALIYKYLVAGVPVPPDLVLPIRRG-LDS-LAARFYNHPALG 117

Query: 62  VGWNCLQMSLGRKIDPEPGRCRRTDGKKWRCSKEAYPDSKYCERHMHRGKNRSRKPVD-- 121
            G        G+K+DPEPGRCRRTDGKKWRCSKEA PDSKYCERHMHRG+NRSRKPV+  
Sbjct: 118 YG-----PYFGKKLDPEPGRCRRTDGKKWRCSKEAAPDSKYCERHMHRGRNRSRKPVETQ 177

Query: 122 -VLKTTATNELNHLSSQAFSSLNKNSSLHSYRPFPAPQMSSNPNGNGISTKDT------N 181
            V ++   + +   ++   ++ +  SS  ++  +PA    SN  G G +   +      +
Sbjct: 178 LVAQSQPPSSVVGSAAAPLAAASNGSSFQNHSLYPA-IAGSNGGGGGRNMPSSFGSALGS 237

Query: 182 TLLLLDPGSYS----DRGPDYRYT-YGLKEEVDEHVFFSQEPSEATARADFSASSTVDSL 241
            L + +   Y+      G D RYT YG +   DE    SQ  +EA   +  +    + S 
Sbjct: 238 QLHMDNAAPYAAVGGGTGKDLRYTAYGTRSLADEQ---SQLITEAINTSIENPWRLLPS- 297

Query: 242 QLTPLTMSCSSLYPK-----QNNFSSLQSGQ----SCYQLHQSLTDPLKQQKREESQKKV 301
           Q +P  +S  S         QN  SSL   Q    S +    +  D +KQ+      + +
Sbjct: 298 QNSPFPLSSYSQLGALSDLGQNTPSSLSKVQRQPLSFFGNDYAAVDSVKQE-----NQTL 357

Query: 302 HRFFDEWPQKEGGSWLDFNDKSSNIGSVSTTRLSISIPTASNELPIFRSKN 330
             FFDEWP K   SW D  D+++N+ S S T+LSISIP AS++     S++
Sbjct: 358 RPFFDEWP-KGRDSWSDLADENANLSSFSGTQLSISIPMASSDFSAASSRS 390

[Close]

BLAST of Carg12964 vs. ExPASy Swiss-Prot
Match: Q6AWY6 (Growth-regulating factor 3 OS=Oryza sativa subsp. japonica OX=39947 GN=GRF3 PE=3 SV=2)

HSP 1 Score: 172.6 bits (436), Expect = 7.6e-42
Identity = 134/348 (38.51%), Postives = 181/348 (52.01%), Query Frame = 0


Query: 8   PFTSAQWQELENQALVFKYMVSGVPIPPDLLFSIKR--STLESPFTSKLFPHHSQHVGWN 67
           PFT+AQ++ELE QAL++KY+V+GVP+P DLL  I+R   +L S F      +H   +G+ 
Sbjct: 53  PFTAAQYEELEQQALIYKYLVAGVPVPADLLLPIRRGLDSLASRF------YHHPVLGYG 112

Query: 68  CLQMSLGRKIDPEPGRCRRTDGKKWRCSKEAYPDSKYCERHMHRGKNRSRKPVDVLKTTA 127
                 G+K+DPEPGRCRRTDGKKWRCSKEA PDSKYCERHMHRG+NRSRKPV+  +  A
Sbjct: 113 SY---FGKKLDPEPGRCRRTDGKKWRCSKEAAPDSKYCERHMHRGRNRSRKPVEA-QLVA 172

Query: 128 TNELNHLSSQAFSSLNKNSSLHSYRPFPAPQMSSNPNGN---------GISTKDTNTLLL 187
            +     ++ A +  +     HS  P  A    +N  G          G     +NT L 
Sbjct: 173 PHSQPPATAPAAAVTSTAFQNHSLYPAIANGGGANGGGGGGGGGGSAPGSFALGSNTQLH 232

Query: 188 LD-PGSYSD-----RGPDYRYT-YGLKEEVDEHVFFSQEPSEATARADFSASSTVDSLQL 247
           +D   SYS         D+RY+ YG++   DEH          T   D S  ++   L  
Sbjct: 233 MDNAASYSTVAAGAGNKDFRYSAYGVRPLADEH------SPLITGAMDTSIDNSWCLLPS 292

Query: 248 TPLTMSCSSLYPKQNNFSSLQSGQSCYQLHQSLTDPLK--------QQKREESQKKVHRF 307
              T S SS YP   N S L     C  L +   +PL             ++  + +  F
Sbjct: 293 QTSTFSVSS-YPMLGNLSELDQNTIC-SLPKVEREPLSFFGSDYVTVDSGKQENQTLRPF 352

Query: 308 FDEWPQKEGGSWLDFNDKSSNIGSVSTTRLSISIPTASNELPIFRSKN 330
           FDEWP K   SW D  D +S + + S T+LSISIP A+++     S++
Sbjct: 353 FDEWP-KARDSWPDLADDNS-LATFSATQLSISIPMATSDFSTTSSRS 380

[Close]

BLAST of Carg12964 vs. ExPASy TrEMBL
Match: A0A6J1H9L2 (Growth-regulating factor OS=Cucurbita moschata OX=3662 GN=LOC111461793 PE=3 SV=1)

HSP 1 Score: 660.6 bits (1703), Expect = 3.4e-186
Identity = 329/330 (99.70%), Postives = 329/330 (99.70%), Query Frame = 0


Query: 1   MSARSMFPFTSAQWQELENQALVFKYMVSGVPIPPDLLFSIKRSTLESPFTSKLFPHHSQ 60
           MSARSMFPFTSAQWQELENQALVFKYMVSGVPIPPDLLFSIKRSTLESPFTSKLFPHHSQ
Sbjct: 1   MSARSMFPFTSAQWQELENQALVFKYMVSGVPIPPDLLFSIKRSTLESPFTSKLFPHHSQ 60

Query: 61  HVGWNCLQMSLGRKIDPEPGRCRRTDGKKWRCSKEAYPDSKYCERHMHRGKNRSRKPVDV 120
           HVGWNCLQMSLGRKIDPEPGRCRRTDGKKWRCSKEAYPDSKYCERHMHRGKNRSRKPVDV
Sbjct: 61  HVGWNCLQMSLGRKIDPEPGRCRRTDGKKWRCSKEAYPDSKYCERHMHRGKNRSRKPVDV 120

Query: 121 LKTTATNELNHLSSQAFSSLNKNSSLHSYRPFPAPQMSSNPNGNGISTKDTNTLLLLDPG 180
           LKTTATNELNHLSSQAFSSLNKNSSLHSYRPFPAPQMSSNPNGNGISTKDTNTLLLLDPG
Sbjct: 121 LKTTATNELNHLSSQAFSSLNKNSSLHSYRPFPAPQMSSNPNGNGISTKDTNTLLLLDPG 180

Query: 181 SYSDRGPDYRYTYGLKEEVDEHVFFSQEPSEATARADFSASSTVDSLQLTPLTMSCSSLY 240
           SYSDRGPDYRYTYGLKEEVDEHVFFSQEPSEATARADFSASSTVDSLQLTPLTMSCSSLY
Sbjct: 181 SYSDRGPDYRYTYGLKEEVDEHVFFSQEPSEATARADFSASSTVDSLQLTPLTMSCSSLY 240

Query: 241 PKQNNFSSLQSGQSCYQLHQSLTDPLKQQKREESQKKVHRFFDEWPQKEGGSWLDFNDKS 300
           PKQNNFSSLQSGQSCYQLHQSLTDPLKQQKREESQKKVHRFFDEWPQK GGSWLDFNDKS
Sbjct: 241 PKQNNFSSLQSGQSCYQLHQSLTDPLKQQKREESQKKVHRFFDEWPQK-GGSWLDFNDKS 300

Query: 301 SNIGSVSTTRLSISIPTASNELPIFRSKNP 331
           SNIGSVSTTRLSISIPTASNELPIFRSKNP
Sbjct: 301 SNIGSVSTTRLSISIPTASNELPIFRSKNP 329

[Close]

BLAST of Carg12964 vs. ExPASy TrEMBL
Match: A0A6J1JIG4 (Growth-regulating factor OS=Cucurbita maxima OX=3661 GN=LOC111484886 PE=3 SV=1)

HSP 1 Score: 657.5 bits (1695), Expect = 2.9e-185
Identity = 326/330 (98.79%), Postives = 327/330 (99.09%), Query Frame = 0


Query: 1   MSARSMFPFTSAQWQELENQALVFKYMVSGVPIPPDLLFSIKRSTLESPFTSKLFPHHSQ 60
           MSARSMFPFTSAQWQELENQALVFKYMVSGVPIPPDLLFSIKRSTLESPFTSKLFPHHSQ
Sbjct: 1   MSARSMFPFTSAQWQELENQALVFKYMVSGVPIPPDLLFSIKRSTLESPFTSKLFPHHSQ 60

Query: 61  HVGWNCLQMSLGRKIDPEPGRCRRTDGKKWRCSKEAYPDSKYCERHMHRGKNRSRKPVDV 120
           HVGWNCLQMSLGRKIDPEPGRCRRTDGKKWRCSKEAYPDSKYCERHMHRGKNRSRKPVDV
Sbjct: 61  HVGWNCLQMSLGRKIDPEPGRCRRTDGKKWRCSKEAYPDSKYCERHMHRGKNRSRKPVDV 120

Query: 121 LKTTATNELNHLSSQAFSSLNKNSSLHSYRPFPAPQMSSNPNGNGISTKDTNTLLLLDPG 180
           LKTTATNELNHLS+QAFSSLNKNSSLHSYRPFPAPQMSSNPNGNGISTKDTNTLLLLD G
Sbjct: 121 LKTTATNELNHLSNQAFSSLNKNSSLHSYRPFPAPQMSSNPNGNGISTKDTNTLLLLDSG 180

Query: 181 SYSDRGPDYRYTYGLKEEVDEHVFFSQEPSEATARADFSASSTVDSLQLTPLTMSCSSLY 240
           SYSDR PDYRYTYGLKEEVDEHVFFSQEPSEATARADFSASSTVDSLQLTPLTMSCSSLY
Sbjct: 181 SYSDRSPDYRYTYGLKEEVDEHVFFSQEPSEATARADFSASSTVDSLQLTPLTMSCSSLY 240

Query: 241 PKQNNFSSLQSGQSCYQLHQSLTDPLKQQKREESQKKVHRFFDEWPQKEGGSWLDFNDKS 300
           PKQNNFSSLQSGQSCYQLHQSLTDPLKQQKREESQKKVHRFFDEWPQK GGSWLDFNDKS
Sbjct: 241 PKQNNFSSLQSGQSCYQLHQSLTDPLKQQKREESQKKVHRFFDEWPQKGGGSWLDFNDKS 300

Query: 301 SNIGSVSTTRLSISIPTASNELPIFRSKNP 331
           SNIGSVSTTRLSISIPTASNELPIFRSKNP
Sbjct: 301 SNIGSVSTTRLSISIPTASNELPIFRSKNP 330

[Close]

BLAST of Carg12964 vs. ExPASy TrEMBL
Match: A0A6J1H9R5 (Growth-regulating factor OS=Cucurbita moschata OX=3662 GN=LOC111461793 PE=3 SV=1)

HSP 1 Score: 647.1 bits (1668), Expect = 3.9e-182
Identity = 329/354 (92.94%), Postives = 329/354 (92.94%), Query Frame = 0


Query: 1   MSARSMFPFTSAQWQELENQALVFKYMVSGVPIPPDLLFSIKRSTLESPFTSKLFPHHSQ 60
           MSARSMFPFTSAQWQELENQALVFKYMVSGVPIPPDLLFSIKRSTLESPFTSKLFPHHSQ
Sbjct: 1   MSARSMFPFTSAQWQELENQALVFKYMVSGVPIPPDLLFSIKRSTLESPFTSKLFPHHSQ 60

Query: 61  H------------------------VGWNCLQMSLGRKIDPEPGRCRRTDGKKWRCSKEA 120
           H                        VGWNCLQMSLGRKIDPEPGRCRRTDGKKWRCSKEA
Sbjct: 61  HGISTSLSLSLLLSLSLSEMFVFHAVGWNCLQMSLGRKIDPEPGRCRRTDGKKWRCSKEA 120

Query: 121 YPDSKYCERHMHRGKNRSRKPVDVLKTTATNELNHLSSQAFSSLNKNSSLHSYRPFPAPQ 180
           YPDSKYCERHMHRGKNRSRKPVDVLKTTATNELNHLSSQAFSSLNKNSSLHSYRPFPAPQ
Sbjct: 121 YPDSKYCERHMHRGKNRSRKPVDVLKTTATNELNHLSSQAFSSLNKNSSLHSYRPFPAPQ 180

Query: 181 MSSNPNGNGISTKDTNTLLLLDPGSYSDRGPDYRYTYGLKEEVDEHVFFSQEPSEATARA 240
           MSSNPNGNGISTKDTNTLLLLDPGSYSDRGPDYRYTYGLKEEVDEHVFFSQEPSEATARA
Sbjct: 181 MSSNPNGNGISTKDTNTLLLLDPGSYSDRGPDYRYTYGLKEEVDEHVFFSQEPSEATARA 240

Query: 241 DFSASSTVDSLQLTPLTMSCSSLYPKQNNFSSLQSGQSCYQLHQSLTDPLKQQKREESQK 300
           DFSASSTVDSLQLTPLTMSCSSLYPKQNNFSSLQSGQSCYQLHQSLTDPLKQQKREESQK
Sbjct: 241 DFSASSTVDSLQLTPLTMSCSSLYPKQNNFSSLQSGQSCYQLHQSLTDPLKQQKREESQK 300

Query: 301 KVHRFFDEWPQKEGGSWLDFNDKSSNIGSVSTTRLSISIPTASNELPIFRSKNP 331
           KVHRFFDEWPQK GGSWLDFNDKSSNIGSVSTTRLSISIPTASNELPIFRSKNP
Sbjct: 301 KVHRFFDEWPQK-GGSWLDFNDKSSNIGSVSTTRLSISIPTASNELPIFRSKNP 353

[Close]

BLAST of Carg12964 vs. ExPASy TrEMBL
Match: A0A6J1D2N6 (Growth-regulating factor OS=Momordica charantia OX=3673 GN=LOC111016450 PE=3 SV=1)

HSP 1 Score: 578.6 bits (1490), Expect = 1.7e-161
Identity = 283/330 (85.76%), Postives = 306/330 (92.73%), Query Frame = 0


Query: 1   MSARSMFPFTSAQWQELENQALVFKYMVSGVPIPPDLLFSIKRSTLESPFTSKLFPHHSQ 60
           MSARSMFPFTSAQWQELE+QAL+FKYMVSG+PIPPDLLFSIKRSTL+S FTSKLFPHH Q
Sbjct: 1   MSARSMFPFTSAQWQELEHQALIFKYMVSGIPIPPDLLFSIKRSTLDSSFTSKLFPHHPQ 60

Query: 61  HVGWNCLQMSLGRKIDPEPGRCRRTDGKKWRCSKEAYPDSKYCERHMHRGKNRSRKPVDV 120
           HVGWN LQMSLGRKIDPEPGRCRRTDGKKWRCSKEAYPDSKYCERHMHRGKNRSRKPVDV
Sbjct: 61  HVGWNYLQMSLGRKIDPEPGRCRRTDGKKWRCSKEAYPDSKYCERHMHRGKNRSRKPVDV 120

Query: 121 LKTTATNELNHLSSQAFSSLNKNSSLHSYRPFPAPQMSSNPNGNGISTKDTNTLLLLDPG 180
           LKTTATN++NHLS+ AFSSL  NSS+ SYRPFPA Q+S  PNGN IST+DT+TLLLL+ G
Sbjct: 121 LKTTATNDINHLSNPAFSSLTNNSSMLSYRPFPAHQISLTPNGNAISTQDTSTLLLLESG 180

Query: 181 SYSDRGPDYRYTYGLKEEVDEHVFFSQEPSEATARADFSASSTVDSLQLTPLTMSCSSLY 240
           SYSDR PDYRYTYGL+E+VDEHVFFSQEPSE T+R DFSASS  DSLQLTPL+MSCSSLY
Sbjct: 181 SYSDRNPDYRYTYGLREDVDEHVFFSQEPSETTSRTDFSASSMADSLQLTPLSMSCSSLY 240

Query: 241 PKQNNFSSLQSGQSCYQLHQSLTDPLKQQKREESQKKVHRFFDEWPQKEGGSWLDFNDKS 300
           PKQNN SSLQ+ QSCYQ+H+SLTDPLKQQKR+ESQK VHRFFDEWP KE GSWLDF+DK+
Sbjct: 241 PKQNNCSSLQNDQSCYQIHESLTDPLKQQKRDESQKTVHRFFDEWPPKERGSWLDFDDKT 300

Query: 301 SNIGSVSTTRLSISIPTASNELPIFRSKNP 331
           SN GSVSTTRLSISIPTASN+ PIFRSKNP
Sbjct: 301 SNNGSVSTTRLSISIPTASNDFPIFRSKNP 330

[Close]

BLAST of Carg12964 vs. ExPASy TrEMBL
Match: A0A6J1D2Q2 (Growth-regulating factor OS=Momordica charantia OX=3673 GN=LOC111016450 PE=3 SV=1)

HSP 1 Score: 573.5 bits (1477), Expect = 5.5e-160
Identity = 283/332 (85.24%), Postives = 306/332 (92.17%), Query Frame = 0


Query: 1   MSARSMFPFTSAQWQELENQALVFKYMVSGVPIPPDLLFSIKRSTLESPFTSKLFPHHSQ 60
           MSARSMFPFTSAQWQELE+QAL+FKYMVSG+PIPPDLLFSIKRSTL+S FTSKLFPHH Q
Sbjct: 1   MSARSMFPFTSAQWQELEHQALIFKYMVSGIPIPPDLLFSIKRSTLDSSFTSKLFPHHPQ 60

Query: 61  HVGWNCLQMSLGRKIDPEPGRCRRTDGKKWRCSKEAYPDSKYCERHMHRGKNRSRKPVDV 120
           HVGWN LQMSLGRKIDPEPGRCRRTDGKKWRCSKEAYPDSKYCERHMHRGKNRSRKPVDV
Sbjct: 61  HVGWNYLQMSLGRKIDPEPGRCRRTDGKKWRCSKEAYPDSKYCERHMHRGKNRSRKPVDV 120

Query: 121 LKTTATNELNHLSSQAFSSLNKNSSLHSYRPFPAPQMSSNPNGNGISTKDTNTLLLLDPG 180
           LKTTATN++NHLS+ AFSSL  NSS+ SYRPFPA Q+S  PNGN IST+DT+TLLLL+ G
Sbjct: 121 LKTTATNDINHLSNPAFSSLTNNSSMLSYRPFPAHQISLTPNGNAISTQDTSTLLLLESG 180

Query: 181 SYSDRGPDY--RYTYGLKEEVDEHVFFSQEPSEATARADFSASSTVDSLQLTPLTMSCSS 240
           SYSDR PDY  RYTYGL+E+VDEHVFFSQEPSE T+R DFSASS  DSLQLTPL+MSCSS
Sbjct: 181 SYSDRNPDYRSRYTYGLREDVDEHVFFSQEPSETTSRTDFSASSMADSLQLTPLSMSCSS 240

Query: 241 LYPKQNNFSSLQSGQSCYQLHQSLTDPLKQQKREESQKKVHRFFDEWPQKEGGSWLDFND 300
           LYPKQNN SSLQ+ QSCYQ+H+SLTDPLKQQKR+ESQK VHRFFDEWP KE GSWLDF+D
Sbjct: 241 LYPKQNNCSSLQNDQSCYQIHESLTDPLKQQKRDESQKTVHRFFDEWPPKERGSWLDFDD 300

Query: 301 KSSNIGSVSTTRLSISIPTASNELPIFRSKNP 331
           K+SN GSVSTTRLSISIPTASN+ PIFRSKNP
Sbjct: 301 KTSNNGSVSTTRLSISIPTASNDFPIFRSKNP 332

[Close]

BLAST of Carg12964 vs. TAIR 10
Match: AT3G13960.1 (growth-regulating factor 5 )

HSP 1 Score: 193.7 bits (491), Expect = 2.3e-49
Identity = 98/178 (55.06%), Postives = 127/178 (71.35%), Query Frame = 0


Query: 8   PFTSAQWQELENQALVFKYMVSGVPIPPDLLFSIKRSTLESPFTSKLFPHHSQHVGWNCL 67
           PFT  QW+ELE+QAL++KYMVSGVP+PP+L+FSI+RS L++   S+L PH  Q +GW C 
Sbjct: 16  PFTPTQWEELEHQALIYKYMVSGVPVPPELIFSIRRS-LDTSLVSRLLPH--QSLGWGCY 75

Query: 68  QMSLGRKIDPEPGRCRRTDGKKWRCSKEAYPDSKYCERHMHRGKNRSRKPVDVLKTTATN 127
           QM  GRK DPEPGRCRRTDGKKWRCS+EAYPDSKYCE+HMHRG+NR+RK +D  +TT T 
Sbjct: 76  QMGFGRKPDPEPGRCRRTDGKKWRCSREAYPDSKYCEKHMHRGRNRARKSLDQNQTTTT- 135

Query: 128 ELNHLSSQAFSSLNKNSSLHSYRPFPAPQMSSNPNGNGISTKDTNTLLLLDPGSYSDR 186
               L+S + S  N N+        P+P +SS+ + N  ST  + +   +D  S S+R
Sbjct: 136 ---PLTSPSLSFTNNNN--------PSPTLSSSSSSNSSSTTYSASSSSMDAYSNSNR 178

[Close]

BLAST of Carg12964 vs. TAIR 10
Match: AT2G06200.1 (growth-regulating factor 6 )

HSP 1 Score: 167.2 bits (422), Expect = 2.3e-41
Identity = 80/118 (67.80%), Postives = 90/118 (76.27%), Query Frame = 0


Query: 8   PFTSAQWQELENQALVFKYMVSGVPIPPDLLFSIKR------STLESPFTSKLFPHHSQH 67
           PFT +QW+ELENQALVFKY+ + +P+PP LLF IKR      S+  S  +S   P  S H
Sbjct: 6   PFTESQWEELENQALVFKYLAANMPVPPHLLFLIKRPFLFSSSSSSSSSSSFFSPTLSPH 65

Query: 68  VGWNCLQMSLGRKIDPEPGRCRRTDGKKWRCSKEAYPDSKYCERHMHRGKNR--SRKP 118
            GWN  +M +GRKID EPGRCRRTDGKKWRCSKEAYPDSKYCERHMHRGKNR  SRKP
Sbjct: 66  FGWNVYEMGMGRKIDAEPGRCRRTDGKKWRCSKEAYPDSKYCERHMHRGKNRSSSRKP 123

[Close]

BLAST of Carg12964 vs. TAIR 10
Match: AT4G37740.1 (growth-regulating factor 2 )

HSP 1 Score: 132.5 bits (332), Expect = 6.2e-31
Identity = 75/180 (41.67%), Postives = 101/180 (56.11%), Query Frame = 0


Query: 8   PFTSAQWQELENQALVFKYMVSGVPIPPDLLFSIKRSTLESPFTSKLFPHHS---QHVGW 67
           PFT  QW ELE QAL++KY+ + VP+P  LL SIK+S          +P+ S      GW
Sbjct: 164 PFTLTQWAELEQQALIYKYITANVPVPSSLLISIKKS---------FYPYGSLPPSSFGW 223

Query: 68  NCLQMSL-GRKIDPEPGRCRRTDGKKWRCSKEAYPDSKYCERHMHRGKNRSRKPVDVLKT 127
               +   G  +DPEPGRCRRTDGKKWRCS++A PD KYCERH++RG++RSRKPV+V   
Sbjct: 224 GTFHLGFAGGNMDPEPGRCRRTDGKKWRCSRDAVPDQKYCERHINRGRHRSRKPVEV--Q 283

Query: 128 TATNELNHLSSQAFSS----------------LNKNSSLHSYRPFPAPQMSSNPNGNGIS 168
           +  N+    +S+A ++                 + N SL     +  P   S PN  G+S
Sbjct: 284 SGQNQTAAAASKAVTTPQQPVVAGNTNRSNARASSNRSLAIGSQYINPSTESLPNNRGVS 332

[Close]

BLAST of Carg12964 vs. TAIR 10
Match: AT2G36400.1 (growth-regulating factor 3 )

HSP 1 Score: 131.7 bits (330), Expect = 1.1e-30
Identity = 107/314 (34.08%), Postives = 149/314 (47.45%), Query Frame = 0


Query: 9   FTSAQWQELENQALVFKYMVSGVPIPPDLLFSIKRSTLESPFTSKLFPHHS-QHVGWNCL 68
           F+ AQWQELE QAL+++YM++G  +P +LL  IK+S L    +   F HH  QH+     
Sbjct: 77  FSWAQWQELELQALIYRYMLAGAAVPQELLLPIKKSLLH--LSPSYFLHHPLQHLPHYQP 136

Query: 69  QMSLGR-KIDPEPGRCRRTDGKKWRCSKEAYPDSKYCERHMHRGKNRSRKPVDVLKTTAT 128
              LGR  +DPEPGRCRRTDGKKWRCS++ +   KYCERHMHRG+NRSRKPV+   T   
Sbjct: 137 AWYLGRAAMDPEPGRCRRTDGKKWRCSRDVFAGHKYCERHMHRGRNRSRKPVETPTTVNA 196

Query: 129 NELNHLSSQAFSSLNKNSSLHSYRPFPAPQMSSNPNGNGISTKDTNTLLLLDPGSYSDRG 188
              +  SS A ++    ++  S   F     S    G G              GS+    
Sbjct: 197 TATSMASSVAAAATTTTATTTSTFAFGGGGGSEEVVGQG--------------GSF---- 256

Query: 189 PDYRYTYGLKEEVDEHVFFSQEPSEATARADFSASSTVDSLQLTPLTMSCSSLYPKQNNF 248
                                          F + S+  S +L  L+ SCS +  + NN 
Sbjct: 257 -------------------------------FFSGSSNSSSELLHLSQSCSEMKQESNNM 316

Query: 249 SSLQSGQSCYQLHQSLTDPLKQQKREESQKKVHRFFDEWPQKEGGSWLDFNDKSSNIGSV 308
           ++ +     Y+ H   ++      R +    +  FFD+WP+    S L   D SS+  S 
Sbjct: 317 NNKRP----YESHIGFSN-----NRSDGGHILRPFFDDWPR----SSLQEADNSSSPMS- 325

Query: 309 STTRLSISIPTASN 321
           S T LSIS+P  S+
Sbjct: 377 SATCLSISMPGNSS 325

[Close]

BLAST of Carg12964 vs. TAIR 10
Match: AT2G22840.1 (growth-regulating factor 1 )

HSP 1 Score: 131.3 bits (329), Expect = 1.4e-30
Identity = 66/136 (48.53%), Postives = 86/136 (63.24%), Query Frame = 0


Query: 8   PFTSAQWQELENQALVFKYMVSGVPIPPDLLFSIKRSTLESPFTSKLFPHHS---QHVGW 67
           PF+  QW ELE QAL++KY+ + VP+P  LL S+K+S          FP+ S      GW
Sbjct: 133 PFSLTQWAELEQQALIYKYITANVPVPSSLLLSLKKS---------FFPYGSLPPNSFGW 192

Query: 68  NCLQMSL-GRKIDPEPGRCRRTDGKKWRCSKEAYPDSKYCERHMHRGKNRSRKPVDVLKT 127
               +   G  +DPEPGRCRRTDGKKWRCS++A PD KYCERH++RG++RSRKPV+    
Sbjct: 193 GSFHLGFSGGNMDPEPGRCRRTDGKKWRCSRDAVPDQKYCERHINRGRHRSRKPVEGQNG 252

Query: 128 TATNELNHLSSQAFSS 140
             TN     S+ A S+
Sbjct: 253 HNTNAAAAASAAAAST 259

The following BLAST results are available for this feature:

BLAST of Carg12964 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7023693.1	9.9e-188	100.00	Growth-regulating factor 5, partial [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_022961217.1	7.1e-186	99.70	growth-regulating factor 6-like isoform X2 [Cucurbita moschata]	[more]
XP_023516140.1	4.6e-185	98.79	growth-regulating factor 6-like isoform X2 [Cucurbita pepo subsp. pepo]	[more]
XP_022987294.1	6.0e-185	98.79	growth-regulating factor 6-like [Cucurbita maxima]	[more]
KAG6590031.1	1.2e-182	99.38	Growth-regulating factor 5, partial [Cucurbita argyrosperma subsp. sororia]	[more]

BLAST of Carg12964 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8L8A6	3.2e-48	55.06	Growth-regulating factor 5 OS=Arabidopsis thaliana OX=3702 GN=GRF5 PE=1 SV=1	[more]
A2XA73	2.3e-46	37.50	Growth-regulating factor 1 OS=Oryza sativa subsp. indica OX=39946 GN=GRF1 PE=2 S...	[more]
Q6AWY8	5.1e-46	37.66	Growth-regulating factor 1 OS=Oryza sativa subsp. japonica OX=39947 GN=GRF1 PE=3...	[more]
Q6ZIK5	6.9e-43	38.18	Growth-regulating factor 4 OS=Oryza sativa subsp. japonica OX=39947 GN=GRF4 PE=1...	[more]
Q6AWY6	7.6e-42	38.51	Growth-regulating factor 3 OS=Oryza sativa subsp. japonica OX=39947 GN=GRF3 PE=3...	[more]

BLAST of Carg12964 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1H9L2	3.4e-186	99.70	Growth-regulating factor OS=Cucurbita moschata OX=3662 GN=LOC111461793 PE=3 SV=1	[more]
A0A6J1JIG4	2.9e-185	98.79	Growth-regulating factor OS=Cucurbita maxima OX=3661 GN=LOC111484886 PE=3 SV=1	[more]
A0A6J1H9R5	3.9e-182	92.94	Growth-regulating factor OS=Cucurbita moschata OX=3662 GN=LOC111461793 PE=3 SV=1	[more]
A0A6J1D2N6	1.7e-161	85.76	Growth-regulating factor OS=Momordica charantia OX=3673 GN=LOC111016450 PE=3 SV=...	[more]
A0A6J1D2Q2	5.5e-160	85.24	Growth-regulating factor OS=Momordica charantia OX=3673 GN=LOC111016450 PE=3 SV=...	[more]

BLAST of Carg12964 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G13960.1	2.3e-49	55.06	growth-regulating factor 5	[more]
AT2G06200.1	2.3e-41	67.80	growth-regulating factor 6	[more]
AT4G37740.1	6.2e-31	41.67	growth-regulating factor 2	[more]
AT2G36400.1	1.1e-30	34.08	growth-regulating factor 3	[more]
AT2G22840.1	1.4e-30	48.53	growth-regulating factor 1	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25

Position :

Zoom :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR014978	Glutamine-Leucine-Glutamine, QLQ	SMART	SM00951	QLQ_2	coord: 7..43 e-value: 1.2E-12 score: 58.1
IPR014978	Glutamine-Leucine-Glutamine, QLQ	PFAM	PF08880	QLQ	coord: 8..41 e-value: 5.6E-15 score: 54.8
IPR014978	Glutamine-Leucine-Glutamine, QLQ	PROSITE	PS51666	QLQ	coord: 8..43 score: 22.022081
IPR014977	WRC domain	PFAM	PF08879	WRC	coord: 77..118 e-value: 1.1E-20 score: 73.0
IPR014977	WRC domain	PROSITE	PS51667	WRC	coord: 76..120 score: 24.764948
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 148..181
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 148..178
None	No IPR available	PANTHER	PTHR31602:SF46	GROWTH-REGULATING FACTOR 6	coord: 5..318
IPR031137	Growth-regulating factor	PANTHER	PTHR31602	FAMILY NOT NAMED	coord: 5..318

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg12964-RA	Carg12964-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0099402	plant organ development
biological_process	GO:0006355	regulation of transcription, DNA-templated
biological_process	GO:0032502	developmental process
biological_process	GO:0006351	transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0005524	ATP binding