Carg17367-RA (mRNA) Silver-seed gourd (SMH-JMG-627) v2

InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25
Position :
0
Zoom :
x 1
CCTAATCGTCTCAAAGAGGGAACATGGAAGTGGAGAGAAGATCAGTGGAAAAGGAAGAAGAAGAAGACATGAACAAGAACGTAATGCTTAACCATATGGCTCAAATGGGTTTTAGGGTTTTGGGCTTTGTATTGAGCTTAGTGGCAGCCATTGTCGTGGGACTCAACAAACAGTCCAAGGTTGTTCCTCTTACTGTCTCCCTCAACCTCCCTCCTTTGGATTATACTCTCACAGCTAACTGGCATTACTTGTCTGCTCTCGTGTATCTTTTAGCGACGAATGTGATAGCATGTTCGTACAGCTTCCTATCGTTCGTTTTTTTGTTAAAAAACAAGAACAAGGACAACATCTTAGCGTTATTGGTAATTGTTCTCGACACGGTGATGGTGGCGCTGCTCTTCTCCAGCAGCGGAGCTGCAGCGGCGGTCGGAGTCATTGCGTACCACGGGAACTCACACGTGCAATGGAATAAAGTGTGCGATGTATATGGTAGATTTTGCAAGCAAATGGCAGCGTCTACTGTGCTCTCTCTTGCCGGTGCTGTAGTATTTATGTTGCTAGTTGTGTTGGCTTCTGTGGGCCTCCAGAAGAGGCCCAAATAAATGGGCTGGGCTTTGGGCCTGTATTTAAAGCTTCTTCACGGCCCATCTAAATGGGCTTTGGCTCTATTCCTCACAGCCCAATTTAAAGGTTAGGTTATCAGTTGTGGAATTGAAAATGTTACAAGAAGACTATTTATGCATTATATTTTTATTTACCTCAATCTCTTTTTCTCTAAAAAAAATAAAAATAAATTATTTATCAACCGAGCGTAGTTCAATCATTAAAATATTTAATATTTT100200300400500600700800Expect = 3.4E-40 / Score = 135.3Expect = 4.3E-38 / Score = 130.4Score = Score = SequenceTIGR01569PF04535PTHR11615PTHR11615:SF253
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006459Casparian strip membrane proteinTIGRFAMTIGR01569TIGR01569coord: 29..184
e-value: 3.4E-40
score: 135.3
IPR006702Casparian strip membrane protein domainPFAMPF04535DUF588coord: 24..175
e-value: 4.3E-38
score: 130.4
NoneNo IPR availablePANTHERPTHR11615NITRATE, FORMATE, IRON DEHYDROGENASEcoord: 16..190
NoneNo IPR availablePANTHERPTHR11615:SF253CASP-LIKE PROTEIN 1E1coord: 16..190