Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonfive_prime_UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATTTGGGAGCAAAGAAGCGAAGACGAACGGGGACTGTGCCGAGGAAGCGAACCAGAAAGTTTCTGCCTCGCCGGTAAGCTCCTTTATGTAATGCTGAATTGAATGATTTTCAGTGTATAAATGCCCCAATAAATTAGGTTTTACGGTAAACATTTACACGTAGAATCCTTTTTTCCCGAAGTGGGATGTTTCTGTAGTTCGTTCTCAATTTTCGGATTGCTTCTTTTATGCCTTTCATCTGTTTACAAGTGTTTCTGTTCGGAACGTCGGTTTTCGATATCATATTTGCATTGTTGACAATTATCGTCACAATTTGGTTTTTTAGATTGGATTTCTGGAGAGGGAGGCTATTAGTTTCATCTTGTTTTGGGTAGAGAGGTGGAGGGGGATTCTTTAAGGGAGAAATATGCTTCAAATCCGGCTTAGCAAAGTTCCACAGGCGGAAGGTGGCGCTGGAGCAGTGAAGCCCTTGCAAGCGGAGACTGTGACGGTCGCATGCCCTGACCACCTTATCCTTGCTGATCTTCCTGTGGCAAAGGGCATTGGTGCGGCTACTGCTGCTTCCATTGTTAAGTCTGTTGGTCGCAGATCTCGCCGTCACCTTGGAGAACGAGTTCATTTTTGTGTCAGATGCGATTTTCCCATTGCAGTTTATGGTCGCCTGGTATTTTCCCCCACTATATGTTTGTGTCTTTTTTCTGTCGGTTGCTTTGTCTACTTTTGGTCCATGGAAATCATTCATTTATAAAAGACAATTTGAGATCAACTTTTCTTTTTGTCAAATCGGTATGCATTACTTCATTCATATCTGCAATGTTCTTCCTTCTTGCCCGCTGGTGTGTAGGCTTGTATCATTTCTTTTAAAATATTTGTGAGCATCTCTAGCCTGTGTGCATCTTGACTAATCTCACAGGACACCCACTTGACTCTACTACATTTGGGTTGTGGCATACTTAAAGAGCTAAATAGTGGTTTGCCATTCTTGCAGAGCCCATGCGAGCATGTGTTCTGTCTCGATTGTGCAAGAAGCGATTCTATATGCTACCTGTAAGTAAAAATGCTTTCAAGGTCTTAAAATGGCTATTATGGTTCTTTTGTACTATCAATGTCAATATTGATTGCCCATGCATAATCACTTTCTATTGCAGAAACTTTTCTTGTCATGTTCTTCAAAAATCTGTTGTTTTCTTTGATGATTAGAGTACTCTATACATTAGCTTCTGTGTTCTTCATGATAATATAATGTAGACGACTTTAGAAGTTGTGATTATAGTCATATTTTTTATGACACAGTTGTGATGACCGTATCCAGAAGATTCAAACTATAAAATTGATGGAGGGGATCTTCATTTGTGCAGCCCCACATTGTCTCAAGTCTTTTCTTAAGAGGACTGAATTTGAATCTCATATACAAGAGAGTCACGCTGACCTTCTTAAGCCAAATGCAGAGAAGGAAGATGGAAACGAAATTGAGGCTCTTAGTGCCAAACAATCTACAGCTTCTGAATCCACTGTCCGAGGTCTGTCGAGACCAATCATATCTCCAAGTTCCAATTCCCAGGCTCAAGAACGTGACGAAAAATTTCATCGTCAACAATCTAGAGACCAACCCACGTCTGGAATGCAGCAACAAGACAGCGGTGGTCATTCACAAGGCTTTGATCGACATGGCCCTCATGGCCGTTTTCCCCCGCAAAACTTTGACGTACAGGGTACTCCACATCAGGAATCCAGTCAATTTTCAGAGAAACAGCAGGGAATTCTGGCTGACCCTCCATACTCCCAGTACCCTCCTTTGCAATCAATTCCGCCACCAAATTACGTGGTTCCAGCTAACTCAAATCCAATGTTGAGTCCCCCTCTACCGTTCGGTTTTCCTCCGTTTCCAACTGAGGGAGCACAACAATATTACAGTACACCCTATGAAGTGCCACGACAAGATACCGCAGCAGAGACTGGATCCGAGCAAGGGTCACTGCTAGGCTTTCCACCAGGAGCAGCAGGAGGAATGAACTTCTCGGCGACTTATTCTCAACCTTGGAATACTGGACAAGCTGGCGTTCCTTATGAGCATGCTGCTGGAGGTCAAGGAATGCCTGATGCTTTTGCTAATGCACCTGATTCTCAAGTAAATCATGGATTTTACCAAGGAGATTATAGACGCAGCCCTGGAGGCTTGCCTGTGAATTCCTCTGTCTCGTCAATGGCCAACAAGAGCATGGACCTGGGGCATTCTGGTAATGCCATGGACTTGAAGAATGGTAGAGGTATATTGGCACCACAGCCACCTCTAGCACAACTTCCTCTGCCTCCGCCACTCCCACCGTACTTGTCGCATAATAAGCGTGGTAAGTTTCATTCAGGAGATACGGATCATGACGGGCAAGGCCGTGGATGGCAGAATGATAGCCATAGCCGAGATAGCTTTGGAAGTGGCCAAGACTGA
mRNA sequence
ATTTGGGAGCAAAGAAGCGAAGACGAACGGGGACTGTGCCGAGGAAGCGAACCAGAAAGTTTCTGCCTCGCCGGTAAGCTCCTTTATGTAATGCTGAATTGAATGATTTTCAGTGTATAAATGCCCCAATAAATTAGGTTTTACGGTAAACATTTACACTGGGATGTTTCTGTAGTTCGTTCTCAATTTTCGGATTGCTTCTTTTATGCCTTTCATCTGTTTACAAGTGTTTCTGTTCGTTGACAATTATCGTCACAATTTGGTTTTTTAGATTGGATTTCTGGAGAGGGAGGCTATTAGTTTCATCTTGTTTTGGGTAGAGAGGTGGAGGGGGATTCTTTAAGGGAGAAATATGCTTCAAATCCGGCTTAGCAAAGTTCCACAGGCGGAAGGTGGCGCTGGAGCAGTGAAGCCCTTGCAAGCGGAGACTGTGACGGTCGCATGCCCTGACCACCTTATCCTTGCTGATCTTCCTGTGGCAAAGGGCATTGGTGCGGCTACTGCTGCTTCCATTGTTAAGTCTGTTGGTCGCAGATCTCGCCGTCACCTTGGAGAACGAGTTCATTTTTGTGTCAGATGCGATTTTCCCATTGCAGTTTATGGTCGCCTGAAGATTCAAACTATAAAATTGATGGAGGGGATCTTCATTTGTGCAGCCCCACATTGTCTCAAGTCTTTTCTTAAGAGGACTGAATTTGAATCTCATATACAAGAGAGTCACGCTGACCTTCTTAAGCCAAATGCAGAGAAGGAAGATGGAAACGAAATTGAGGCTCTTAGTGCCAAACAATCTACAGCTTCTGAATCCACTGTCCGAGGTCTGTCGAGACCAATCATATCTCCAAGTTCCAATTCCCAGGCTCAAGAACGTGACGAAAAATTTCATCGTCAACAATCTAGAGACCAACCCACGTCTGGAATGCAGCAACAAGACAGCGGTGGTCATTCACAAGGCTTTGATCGACATGGCCCTCATGGCCGTTTTCCCCCGCAAAACTTTGACGTACAGGGTACTCCACATCAGGAATCCAGTCAATTTTCAGAGAAACAGCAGGGAATTCTGGCTGACCCTCCATACTCCCAGTACCCTCCTTTGCAATCAATTCCGCCACCAAATTACGTGGTTCCAGCTAACTCAAATCCAATGTTGAGTCCCCCTCTACCGTTCGGTTTTCCTCCGTTTCCAACTGAGGGAGCACAACAATATTACAGTACACCCTATGAAGTGCCACGACAAGATACCGCAGCAGAGACTGGATCCGAGCAAGGGTCACTGCTAGGCTTTCCACCAGGAGCAGCAGGAGGAATGAACTTCTCGGCGACTTATTCTCAACCTTGGAATACTGGACAAGCTGGCGTTCCTTATGAGCATGCTGCTGGAGGTCAAGGAATGCCTGATGCTTTTGCTAATGCACCTGATTCTCAAGTAAATCATGGATTTTACCAAGGAGATTATAGACGCAGCCCTGGAGGCTTGCCTGTGAATTCCTCTGTCTCGTCAATGGCCAACAAGAGCATGGACCTGGGGCATTCTGGTAATGCCATGGACTTGAAGAATGGTAGAGGTATATTGGCACCACAGCCACCTCTAGCACAACTTCCTCTGCCTCCGCCACTCCCACCGTACTTGTCGCATAATAAGCGTGGTAAGTTTCATTCAGGAGATACGGATCATGACGGGCAAGGCCGTGGATGGCAGAATGATAGCCATAGCCGAGATAGCTTTGGAAGTGGCCAAGACTGA
Coding sequence (CDS)
ATGCTTCAAATCCGGCTTAGCAAAGTTCCACAGGCGGAAGGTGGCGCTGGAGCAGTGAAGCCCTTGCAAGCGGAGACTGTGACGGTCGCATGCCCTGACCACCTTATCCTTGCTGATCTTCCTGTGGCAAAGGGCATTGGTGCGGCTACTGCTGCTTCCATTGTTAAGTCTGTTGGTCGCAGATCTCGCCGTCACCTTGGAGAACGAGTTCATTTTTGTGTCAGATGCGATTTTCCCATTGCAGTTTATGGTCGCCTGAAGATTCAAACTATAAAATTGATGGAGGGGATCTTCATTTGTGCAGCCCCACATTGTCTCAAGTCTTTTCTTAAGAGGACTGAATTTGAATCTCATATACAAGAGAGTCACGCTGACCTTCTTAAGCCAAATGCAGAGAAGGAAGATGGAAACGAAATTGAGGCTCTTAGTGCCAAACAATCTACAGCTTCTGAATCCACTGTCCGAGGTCTGTCGAGACCAATCATATCTCCAAGTTCCAATTCCCAGGCTCAAGAACGTGACGAAAAATTTCATCGTCAACAATCTAGAGACCAACCCACGTCTGGAATGCAGCAACAAGACAGCGGTGGTCATTCACAAGGCTTTGATCGACATGGCCCTCATGGCCGTTTTCCCCCGCAAAACTTTGACGTACAGGGTACTCCACATCAGGAATCCAGTCAATTTTCAGAGAAACAGCAGGGAATTCTGGCTGACCCTCCATACTCCCAGTACCCTCCTTTGCAATCAATTCCGCCACCAAATTACGTGGTTCCAGCTAACTCAAATCCAATGTTGAGTCCCCCTCTACCGTTCGGTTTTCCTCCGTTTCCAACTGAGGGAGCACAACAATATTACAGTACACCCTATGAAGTGCCACGACAAGATACCGCAGCAGAGACTGGATCCGAGCAAGGGTCACTGCTAGGCTTTCCACCAGGAGCAGCAGGAGGAATGAACTTCTCGGCGACTTATTCTCAACCTTGGAATACTGGACAAGCTGGCGTTCCTTATGAGCATGCTGCTGGAGGTCAAGGAATGCCTGATGCTTTTGCTAATGCACCTGATTCTCAAGTAAATCATGGATTTTACCAAGGAGATTATAGACGCAGCCCTGGAGGCTTGCCTGTGAATTCCTCTGTCTCGTCAATGGCCAACAAGAGCATGGACCTGGGGCATTCTGGTAATGCCATGGACTTGAAGAATGGTAGAGGTATATTGGCACCACAGCCACCTCTAGCACAACTTCCTCTGCCTCCGCCACTCCCACCGTACTTGTCGCATAATAAGCGTGGTAAGTTTCATTCAGGAGATACGGATCATGACGGGCAAGGCCGTGGATGGCAGAATGATAGCCATAGCCGAGATAGCTTTGGAAGTGGCCAAGACTGA
Protein sequence
MLQIRLSKVPQAEGGAGAVKPLQAETVTVACPDHLILADLPVAKGIGAATAASIVKSVGRRSRRHLGERVHFCVRCDFPIAVYGRLKIQTIKLMEGIFICAAPHCLKSFLKRTEFESHIQESHADLLKPNAEKEDGNEIEALSAKQSTASESTVRGLSRPIISPSSNSQAQERDEKFHRQQSRDQPTSGMQQQDSGGHSQGFDRHGPHGRFPPQNFDVQGTPHQESSQFSEKQQGILADPPYSQYPPLQSIPPPNYVVPANSNPMLSPPLPFGFPPFPTEGAQQYYSTPYEVPRQDTAAETGSEQGSLLGFPPGAAGGMNFSATYSQPWNTGQAGVPYEHAAGGQGMPDAFANAPDSQVNHGFYQGDYRRSPGGLPVNSSVSSMANKSMDLGHSGNAMDLKNGRGILAPQPPLAQLPLPPPLPPYLSHNKRGKFHSGDTDHDGQGRGWQNDSHSRDSFGSGQD
Homology
BLAST of Carg01085 vs. NCBI nr
Match:
KAG7027916.1 (hypothetical protein SDJN02_09095 [Cucurbita argyrosperma subsp. argyrosperma])
HSP 1 Score: 919.8 bits (2376), Expect = 9.1e-264
Identity = 463/463 (100.00%), Postives = 463/463 (100.00%), Query Frame = 0
Query: 1 MLQIRLSKVPQAEGGAGAVKPLQAETVTVACPDHLILADLPVAKGIGAATAASIVKSVGR 60
MLQIRLSKVPQAEGGAGAVKPLQAETVTVACPDHLILADLPVAKGIGAATAASIVKSVGR
Sbjct: 1 MLQIRLSKVPQAEGGAGAVKPLQAETVTVACPDHLILADLPVAKGIGAATAASIVKSVGR 60
Query: 61 RSRRHLGERVHFCVRCDFPIAVYGRLKIQTIKLMEGIFICAAPHCLKSFLKRTEFESHIQ 120
RSRRHLGERVHFCVRCDFPIAVYGRLKIQTIKLMEGIFICAAPHCLKSFLKRTEFESHIQ
Sbjct: 61 RSRRHLGERVHFCVRCDFPIAVYGRLKIQTIKLMEGIFICAAPHCLKSFLKRTEFESHIQ 120
Query: 121 ESHADLLKPNAEKEDGNEIEALSAKQSTASESTVRGLSRPIISPSSNSQAQERDEKFHRQ 180
ESHADLLKPNAEKEDGNEIEALSAKQSTASESTVRGLSRPIISPSSNSQAQERDEKFHRQ
Sbjct: 121 ESHADLLKPNAEKEDGNEIEALSAKQSTASESTVRGLSRPIISPSSNSQAQERDEKFHRQ 180
Query: 181 QSRDQPTSGMQQQDSGGHSQGFDRHGPHGRFPPQNFDVQGTPHQESSQFSEKQQGILADP 240
QSRDQPTSGMQQQDSGGHSQGFDRHGPHGRFPPQNFDVQGTPHQESSQFSEKQQGILADP
Sbjct: 181 QSRDQPTSGMQQQDSGGHSQGFDRHGPHGRFPPQNFDVQGTPHQESSQFSEKQQGILADP 240
Query: 241 PYSQYPPLQSIPPPNYVVPANSNPMLSPPLPFGFPPFPTEGAQQYYSTPYEVPRQDTAAE 300
PYSQYPPLQSIPPPNYVVPANSNPMLSPPLPFGFPPFPTEGAQQYYSTPYEVPRQDTAAE
Sbjct: 241 PYSQYPPLQSIPPPNYVVPANSNPMLSPPLPFGFPPFPTEGAQQYYSTPYEVPRQDTAAE 300
Query: 301 TGSEQGSLLGFPPGAAGGMNFSATYSQPWNTGQAGVPYEHAAGGQGMPDAFANAPDSQVN 360
TGSEQGSLLGFPPGAAGGMNFSATYSQPWNTGQAGVPYEHAAGGQGMPDAFANAPDSQVN
Sbjct: 301 TGSEQGSLLGFPPGAAGGMNFSATYSQPWNTGQAGVPYEHAAGGQGMPDAFANAPDSQVN 360
Query: 361 HGFYQGDYRRSPGGLPVNSSVSSMANKSMDLGHSGNAMDLKNGRGILAPQPPLAQLPLPP 420
HGFYQGDYRRSPGGLPVNSSVSSMANKSMDLGHSGNAMDLKNGRGILAPQPPLAQLPLPP
Sbjct: 361 HGFYQGDYRRSPGGLPVNSSVSSMANKSMDLGHSGNAMDLKNGRGILAPQPPLAQLPLPP 420
Query: 421 PLPPYLSHNKRGKFHSGDTDHDGQGRGWQNDSHSRDSFGSGQD 464
PLPPYLSHNKRGKFHSGDTDHDGQGRGWQNDSHSRDSFGSGQD
Sbjct: 421 PLPPYLSHNKRGKFHSGDTDHDGQGRGWQNDSHSRDSFGSGQD 463
BLAST of Carg01085 vs. NCBI nr
Match:
KAG6596366.1 (E3 ubiquitin-protein ligase HAKAI-like protein, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 905.6 bits (2339), Expect = 1.8e-259
Identity = 463/489 (94.68%), Postives = 463/489 (94.68%), Query Frame = 0
Query: 1 MLQIRLSKVPQAEGGAGAVKPLQAETVTVACPDHLILADLPVAKGIGAATAASIVKSVGR 60
MLQIRLSKVPQAEGGAGAVKPLQAETVTVACPDHLILADLPVAKGIGAATAASIVKSVGR
Sbjct: 1 MLQIRLSKVPQAEGGAGAVKPLQAETVTVACPDHLILADLPVAKGIGAATAASIVKSVGR 60
Query: 61 RSRRHLGERVHFCVRCDFPIAVYGRL--------------------------KIQTIKLM 120
RSRRHLGERVHFCVRCDFPIAVYGRL KIQTIKLM
Sbjct: 61 RSRRHLGERVHFCVRCDFPIAVYGRLSPCEHVFCLDCARSDSICYLCDDRIQKIQTIKLM 120
Query: 121 EGIFICAAPHCLKSFLKRTEFESHIQESHADLLKPNAEKEDGNEIEALSAKQSTASESTV 180
EGIFICAAPHCLKSFLKRTEFESHIQESHADLLKPNAEKEDGNEIEALSAKQSTASESTV
Sbjct: 121 EGIFICAAPHCLKSFLKRTEFESHIQESHADLLKPNAEKEDGNEIEALSAKQSTASESTV 180
Query: 181 RGLSRPIISPSSNSQAQERDEKFHRQQSRDQPTSGMQQQDSGGHSQGFDRHGPHGRFPPQ 240
RGLSRPIISPSSNSQAQERDEKFHRQQSRDQPTSGMQQQDSGGHSQGFDRHGPHGRFPPQ
Sbjct: 181 RGLSRPIISPSSNSQAQERDEKFHRQQSRDQPTSGMQQQDSGGHSQGFDRHGPHGRFPPQ 240
Query: 241 NFDVQGTPHQESSQFSEKQQGILADPPYSQYPPLQSIPPPNYVVPANSNPMLSPPLPFGF 300
NFDVQGTPHQESSQFSEKQQGILADPPYSQYPPLQSIPPPNYVVPANSNPMLSPPLPFGF
Sbjct: 241 NFDVQGTPHQESSQFSEKQQGILADPPYSQYPPLQSIPPPNYVVPANSNPMLSPPLPFGF 300
Query: 301 PPFPTEGAQQYYSTPYEVPRQDTAAETGSEQGSLLGFPPGAAGGMNFSATYSQPWNTGQA 360
PPFPTEGAQQYYSTPYEVPRQDTAAETGSEQGSLLGFPPGAAGGMNFSATYSQPWNTGQA
Sbjct: 301 PPFPTEGAQQYYSTPYEVPRQDTAAETGSEQGSLLGFPPGAAGGMNFSATYSQPWNTGQA 360
Query: 361 GVPYEHAAGGQGMPDAFANAPDSQVNHGFYQGDYRRSPGGLPVNSSVSSMANKSMDLGHS 420
GVPYEHAAGGQGMPDAFANAPDSQVNHGFYQGDYRRSPGGLPVNSSVSSMANKSMDLGHS
Sbjct: 361 GVPYEHAAGGQGMPDAFANAPDSQVNHGFYQGDYRRSPGGLPVNSSVSSMANKSMDLGHS 420
Query: 421 GNAMDLKNGRGILAPQPPLAQLPLPPPLPPYLSHNKRGKFHSGDTDHDGQGRGWQNDSHS 464
GNAMDLKNGRGILAPQPPLAQLPLPPPLPPYLSHNKRGKFHSGDTDHDGQGRGWQNDSHS
Sbjct: 421 GNAMDLKNGRGILAPQPPLAQLPLPPPLPPYLSHNKRGKFHSGDTDHDGQGRGWQNDSHS 480
BLAST of Carg01085 vs. NCBI nr
Match:
XP_022935351.1 (E3 ubiquitin-protein ligase Hakai-like [Cucurbita moschata] >XP_022935435.1 E3 ubiquitin-protein ligase Hakai-like [Cucurbita moschata])
HSP 1 Score: 893.3 bits (2307), Expect = 9.1e-256
Identity = 458/489 (93.66%), Postives = 458/489 (93.66%), Query Frame = 0
Query: 1 MLQIRLSKVPQAEGGAGAVKPLQAETVTVACPDHLILADLPVAKGIGAATAASIVKSVGR 60
MLQIRLSKVPQAEGGAGAVKPLQAETVTVACPDHLILADLPVAKGIGAATAASIVKSVGR
Sbjct: 1 MLQIRLSKVPQAEGGAGAVKPLQAETVTVACPDHLILADLPVAKGIGAATAASIVKSVGR 60
Query: 61 RSRRHLGERVHFCVRCDFPIAVYGRL--------------------------KIQTIKLM 120
RSRRHLGERVHFCVRCDFPIAVYGRL KIQTIKLM
Sbjct: 61 RSRRHLGERVHFCVRCDFPIAVYGRLSPCEHVFCLDCARSDSICYLCDDRIQKIQTIKLM 120
Query: 121 EGIFICAAPHCLKSFLKRTEFESHIQESHADLLKPNAEKEDGNEIEALSAKQSTASESTV 180
EGIFICAAPHCLKSFLKRTEFESHIQESHADLLKPNAEKEDGNEIEALSAKQSTASESTV
Sbjct: 121 EGIFICAAPHCLKSFLKRTEFESHIQESHADLLKPNAEKEDGNEIEALSAKQSTASESTV 180
Query: 181 RGLSRPIISPSSNSQAQERDEKFHRQQSRDQPTSGMQQQDSGGHSQGFDRHGPHGRFPPQ 240
RGLSRPIISPS NSQAQERDEKFHRQQSRDQPTSGMQQQDSGGHSQGFDRHGPHGRFPPQ
Sbjct: 181 RGLSRPIISPSFNSQAQERDEKFHRQQSRDQPTSGMQQQDSGGHSQGFDRHGPHGRFPPQ 240
Query: 241 NFDVQGTPHQESSQFSEKQQGILADPPYSQYPPLQSIPPPNYVVPANSNPMLSPPLPFGF 300
NFDVQGTPHQESSQFSEK QGILADPPYSQYPPLQSIPPPNYVVPANSNPMLSPPLPFGF
Sbjct: 241 NFDVQGTPHQESSQFSEKPQGILADPPYSQYPPLQSIPPPNYVVPANSNPMLSPPLPFGF 300
Query: 301 PPFPTEGAQQYYSTPYEVPRQDTAAETGSEQGSLLGFPPGAAGGMNFSATYSQPWNTGQA 360
PPFPTEGAQQYYSTPYEVPRQDTAAETGSEQGSLLGFPPGAAGGMNFSATY QPWNTGQA
Sbjct: 301 PPFPTEGAQQYYSTPYEVPRQDTAAETGSEQGSLLGFPPGAAGGMNFSATYPQPWNTGQA 360
Query: 361 GVPYEHAAGGQGMPDAFANAPDSQVNHGFYQGDYRRSPGGLPVNSSVSSMANKSMDLGHS 420
GVPYEHAAGGQGMPDAFANAPDSQVNHGFYQGDYRRSPGGLPVNSSVSSMANKSMDLGHS
Sbjct: 361 GVPYEHAAGGQGMPDAFANAPDSQVNHGFYQGDYRRSPGGLPVNSSVSSMANKSMDLGHS 420
Query: 421 GNAMDLKNGRGILAPQPPLAQLPLPPPLPPYLSHNKRGKFHSGDTDHDGQGRGWQNDSHS 464
GNAMDLKNGRGILAPQPPLAQLPLPPPLP YLSHNKRGKFHSGDTDHDGQG GWQNDSHS
Sbjct: 421 GNAMDLKNGRGILAPQPPLAQLPLPPPLPLYLSHNKRGKFHSGDTDHDGQGHGWQNDSHS 480
BLAST of Carg01085 vs. NCBI nr
Match:
XP_023539354.1 (E3 ubiquitin-protein ligase Hakai-like [Cucurbita pepo subsp. pepo])
HSP 1 Score: 884.4 bits (2284), Expect = 4.2e-253
Identity = 453/489 (92.64%), Postives = 454/489 (92.84%), Query Frame = 0
Query: 1 MLQIRLSKVPQAEGGAGAVKPLQAETVTVACPDHLILADLPVAKGIGAATAASIVKSVGR 60
MLQIRLSKVPQAEGGAG VKPLQAETVTVACPDHLILADLPVA GIGAATAASIVKSVGR
Sbjct: 1 MLQIRLSKVPQAEGGAGTVKPLQAETVTVACPDHLILADLPVANGIGAATAASIVKSVGR 60
Query: 61 RSRRHLGERVHFCVRCDFPIAVYGRL--------------------------KIQTIKLM 120
RSRRHLGERVHFCVRCDFPIAVYGRL KIQTIKLM
Sbjct: 61 RSRRHLGERVHFCVRCDFPIAVYGRLSPCEHVFCLDCARSDSICYLCDDRIQKIQTIKLM 120
Query: 121 EGIFICAAPHCLKSFLKRTEFESHIQESHADLLKPNAEKEDGNEIEALSAKQSTASESTV 180
EGIFICAAPHCLKSFLKRTEFESHIQESHADLLKPNAEKEDGNEIEALSAKQSTASESTV
Sbjct: 121 EGIFICAAPHCLKSFLKRTEFESHIQESHADLLKPNAEKEDGNEIEALSAKQSTASESTV 180
Query: 181 RGLSRPIISPSSNSQAQERDEKFHRQQSRDQPTSGMQQQDSGGHSQGFDRHGPHGRFPPQ 240
RG SRPIISPSSNS AQERDEKFHRQQSRDQPTSGMQQQDSGGHSQGFDRHGPHG FPPQ
Sbjct: 181 RGPSRPIISPSSNSLAQERDEKFHRQQSRDQPTSGMQQQDSGGHSQGFDRHGPHGHFPPQ 240
Query: 241 NFDVQGTPHQESSQFSEKQQGILADPPYSQYPPLQSIPPPNYVVPANSNPMLSPPLPFGF 300
NFDVQGTPHQESSQFSEKQQGILADPPYSQYPPLQSIPPPNYVVPANSNPMLSPPLPFGF
Sbjct: 241 NFDVQGTPHQESSQFSEKQQGILADPPYSQYPPLQSIPPPNYVVPANSNPMLSPPLPFGF 300
Query: 301 PPFPTEGAQQYYSTPYEVPRQDTAAETGSEQGSLLGFPPGAAGGMNFSATYSQPWNTGQA 360
PPFPTEGAQQYYSTPYEVPRQDTAAETGSEQGSLLGFPPGAAGGMNFSATY QPWNTGQA
Sbjct: 301 PPFPTEGAQQYYSTPYEVPRQDTAAETGSEQGSLLGFPPGAAGGMNFSATYPQPWNTGQA 360
Query: 361 GVPYEHAAGGQGMPDAFANAPDSQVNHGFYQGDYRRSPGGLPVNSSVSSMANKSMDLGHS 420
GVPYEHAAGGQGMPD FANAPDSQVNHGFYQGDYRRSPGGLPVNSSVSSMANKSMDLGHS
Sbjct: 361 GVPYEHAAGGQGMPDTFANAPDSQVNHGFYQGDYRRSPGGLPVNSSVSSMANKSMDLGHS 420
Query: 421 GNAMDLKNGRGILAPQPPLAQLPLPPPLPPYLSHNKRGKFHSGDTDHDGQGRGWQNDSHS 464
GNAMDLKNGRGILAPQPPLAQLPLPPPLP YLSHNKRGKFHSGDTDHDGQG GWQNDSHS
Sbjct: 421 GNAMDLKNGRGILAPQPPLAQLPLPPPLPLYLSHNKRGKFHSGDTDHDGQGHGWQNDSHS 480
BLAST of Carg01085 vs. NCBI nr
Match:
XP_022971545.1 (E3 ubiquitin-protein ligase Hakai-like [Cucurbita maxima] >XP_022971546.1 E3 ubiquitin-protein ligase Hakai-like [Cucurbita maxima])
HSP 1 Score: 881.3 bits (2276), Expect = 3.6e-252
Identity = 452/489 (92.43%), Postives = 453/489 (92.64%), Query Frame = 0
Query: 1 MLQIRLSKVPQAEGGAGAVKPLQAETVTVACPDHLILADLPVAKGIGAATAASIVKSVGR 60
MLQIRLSKVPQAEGGAGAVKPLQAETVTVACPDHLILADLPVAKGIGAATAASIVKSVGR
Sbjct: 1 MLQIRLSKVPQAEGGAGAVKPLQAETVTVACPDHLILADLPVAKGIGAATAASIVKSVGR 60
Query: 61 RSRRHLGERVHFCVRCDFPIAVYGRL--------------------------KIQTIKLM 120
RSRR LGERVHFCVRCDFPIAVYGRL KIQTIKLM
Sbjct: 61 RSRRQLGERVHFCVRCDFPIAVYGRLSPCEHVFCLDCARSDSICYLCDDRIQKIQTIKLM 120
Query: 121 EGIFICAAPHCLKSFLKRTEFESHIQESHADLLKPNAEKEDGNEIEALSAKQSTASESTV 180
EGIFICAAPHCLKSFLKRTEFESHIQESHA+LLKPNAE EDGNEIEALSAKQSTASESTV
Sbjct: 121 EGIFICAAPHCLKSFLKRTEFESHIQESHAELLKPNAEMEDGNEIEALSAKQSTASESTV 180
Query: 181 RGLSRPIISPSSNSQAQERDEKFHRQQSRDQPTSGMQQQDSGGHSQGFDRHGPHGRFPPQ 240
RG SRPIISPSSNSQAQE DEKFHRQQSRDQPTSGMQQQDSGGHSQGFDRHGPHGRFPPQ
Sbjct: 181 RGPSRPIISPSSNSQAQEHDEKFHRQQSRDQPTSGMQQQDSGGHSQGFDRHGPHGRFPPQ 240
Query: 241 NFDVQGTPHQESSQFSEKQQGILADPPYSQYPPLQSIPPPNYVVPANSNPMLSPPLPFGF 300
NFDVQG PHQESSQFSEKQQGILADPPYSQYPPLQSIPPPNYVVPANSNPMLSPPLPFGF
Sbjct: 241 NFDVQGPPHQESSQFSEKQQGILADPPYSQYPPLQSIPPPNYVVPANSNPMLSPPLPFGF 300
Query: 301 PPFPTEGAQQYYSTPYEVPRQDTAAETGSEQGSLLGFPPGAAGGMNFSATYSQPWNTGQA 360
PPFPTEGAQQYYSTPYEVPRQDTAAETGSEQGSLLGFPPGAAGGMNFSATY QPWNTGQA
Sbjct: 301 PPFPTEGAQQYYSTPYEVPRQDTAAETGSEQGSLLGFPPGAAGGMNFSATYPQPWNTGQA 360
Query: 361 GVPYEHAAGGQGMPDAFANAPDSQVNHGFYQGDYRRSPGGLPVNSSVSSMANKSMDLGHS 420
GVPYEHAAGGQGMPDAFANAPDSQVNHGFYQGDYRRSPGGLPVNSSVSSMANKSMDLGH
Sbjct: 361 GVPYEHAAGGQGMPDAFANAPDSQVNHGFYQGDYRRSPGGLPVNSSVSSMANKSMDLGHY 420
Query: 421 GNAMDLKNGRGILAPQPPLAQLPLPPPLPPYLSHNKRGKFHSGDTDHDGQGRGWQNDSHS 464
GNAMDLKNGRGILAPQPPLAQLPLPPP PPYLSHNK GKFHSGDTDHDGQG GWQNDSHS
Sbjct: 421 GNAMDLKNGRGILAPQPPLAQLPLPPPRPPYLSHNKHGKFHSGDTDHDGQGHGWQNDSHS 480
BLAST of Carg01085 vs. ExPASy Swiss-Prot
Match:
Q9LFC0 (E3 ubiquitin-protein ligase HAKAI homolog OS=Arabidopsis thaliana OX=3702 GN=HAKAI PE=1 SV=1)
HSP 1 Score: 233.0 bits (593), Expect = 6.7e-60
Identity = 161/367 (43.87%), Postives = 201/367 (54.77%), Query Frame = 0
Query: 1 MLQIRLSKVPQAEGGAGAVKPLQAETVTVACPDHLILADLPVAKGIGAATAASIVKSVGR 60
MLQIRL + E G GA +P ETVTVACPDHL+LADLPVAKGIG+ T +++K VGR
Sbjct: 1 MLQIRLRRDSPTETGNGA-RPSPTETVTVACPDHLVLADLPVAKGIGSVTPTTVIKPVGR 60
Query: 61 RSRRHLGERVHFCVRCDFPIAVYGRL--------------------------KIQTIKLM 120
RSRR LGERVHFCVRCDFPIA+YGRL KIQTIK+M
Sbjct: 61 RSRRQLGERVHFCVRCDFPIAIYGRLIPCDHAFCLECARSDSICYLCDERIQKIQTIKMM 120
Query: 121 EGIFICAAPHCLKSFLKRTEFESHIQESHADLLKPNAEKEDGNEIEALSA-KQSTASEST 180
EGIFICAAPHCL+SFLK+ +FE+H+ + H LL+ +AEKEDGN+ + S +QS+ASEST
Sbjct: 121 EGIFICAAPHCLRSFLKKLDFEAHVHDLHGSLLQADAEKEDGNQSDVQSTMQQSSASEST 180
Query: 181 VRGLSRPIISPSSNSQAQERDEKFHRQQSRDQPTSGMQQQDSGGHSQGFDRHGPHGRFPP 240
+R P+ S S+ R F + QS GF+ P P
Sbjct: 181 LRA---PLRSQLQQSRELNRSASFAKSQSGFSQVQNYPPDSDNSRPPGFETASPK---PG 240
Query: 241 QNFDVQGTPHQESSQFSEKQQGILADPPYSQYPPLQSIPPPNYVVPANSNPMLSPPLPFG 300
F P Y Q P+ + PP+ VP N NP L P FG
Sbjct: 241 IRF-----------------------PDYPQ--PMNLMQPPSLPVPMNQNPGL--PQQFG 300
Query: 301 FPPFPTE---GAQQYYS-TPYEVPRQDTAAETGSEQGSLLGF-PPGAAGGMNFSATYSQP 335
FP +PT +QQ+++ YE+ R ++ GSEQ SLLG+ PP +NF +Y P
Sbjct: 301 FPSYPTTESGSSQQFFNGAQYEMTRTESG---GSEQSSLLGYPPPSPMTNLNFQGSYPPP 330
BLAST of Carg01085 vs. ExPASy TrEMBL
Match:
A0A6J1FAM2 (RING-type E3 ubiquitin transferase OS=Cucurbita moschata OX=3662 GN=LOC111442234 PE=4 SV=1)
HSP 1 Score: 893.3 bits (2307), Expect = 4.4e-256
Identity = 458/489 (93.66%), Postives = 458/489 (93.66%), Query Frame = 0
Query: 1 MLQIRLSKVPQAEGGAGAVKPLQAETVTVACPDHLILADLPVAKGIGAATAASIVKSVGR 60
MLQIRLSKVPQAEGGAGAVKPLQAETVTVACPDHLILADLPVAKGIGAATAASIVKSVGR
Sbjct: 1 MLQIRLSKVPQAEGGAGAVKPLQAETVTVACPDHLILADLPVAKGIGAATAASIVKSVGR 60
Query: 61 RSRRHLGERVHFCVRCDFPIAVYGRL--------------------------KIQTIKLM 120
RSRRHLGERVHFCVRCDFPIAVYGRL KIQTIKLM
Sbjct: 61 RSRRHLGERVHFCVRCDFPIAVYGRLSPCEHVFCLDCARSDSICYLCDDRIQKIQTIKLM 120
Query: 121 EGIFICAAPHCLKSFLKRTEFESHIQESHADLLKPNAEKEDGNEIEALSAKQSTASESTV 180
EGIFICAAPHCLKSFLKRTEFESHIQESHADLLKPNAEKEDGNEIEALSAKQSTASESTV
Sbjct: 121 EGIFICAAPHCLKSFLKRTEFESHIQESHADLLKPNAEKEDGNEIEALSAKQSTASESTV 180
Query: 181 RGLSRPIISPSSNSQAQERDEKFHRQQSRDQPTSGMQQQDSGGHSQGFDRHGPHGRFPPQ 240
RGLSRPIISPS NSQAQERDEKFHRQQSRDQPTSGMQQQDSGGHSQGFDRHGPHGRFPPQ
Sbjct: 181 RGLSRPIISPSFNSQAQERDEKFHRQQSRDQPTSGMQQQDSGGHSQGFDRHGPHGRFPPQ 240
Query: 241 NFDVQGTPHQESSQFSEKQQGILADPPYSQYPPLQSIPPPNYVVPANSNPMLSPPLPFGF 300
NFDVQGTPHQESSQFSEK QGILADPPYSQYPPLQSIPPPNYVVPANSNPMLSPPLPFGF
Sbjct: 241 NFDVQGTPHQESSQFSEKPQGILADPPYSQYPPLQSIPPPNYVVPANSNPMLSPPLPFGF 300
Query: 301 PPFPTEGAQQYYSTPYEVPRQDTAAETGSEQGSLLGFPPGAAGGMNFSATYSQPWNTGQA 360
PPFPTEGAQQYYSTPYEVPRQDTAAETGSEQGSLLGFPPGAAGGMNFSATY QPWNTGQA
Sbjct: 301 PPFPTEGAQQYYSTPYEVPRQDTAAETGSEQGSLLGFPPGAAGGMNFSATYPQPWNTGQA 360
Query: 361 GVPYEHAAGGQGMPDAFANAPDSQVNHGFYQGDYRRSPGGLPVNSSVSSMANKSMDLGHS 420
GVPYEHAAGGQGMPDAFANAPDSQVNHGFYQGDYRRSPGGLPVNSSVSSMANKSMDLGHS
Sbjct: 361 GVPYEHAAGGQGMPDAFANAPDSQVNHGFYQGDYRRSPGGLPVNSSVSSMANKSMDLGHS 420
Query: 421 GNAMDLKNGRGILAPQPPLAQLPLPPPLPPYLSHNKRGKFHSGDTDHDGQGRGWQNDSHS 464
GNAMDLKNGRGILAPQPPLAQLPLPPPLP YLSHNKRGKFHSGDTDHDGQG GWQNDSHS
Sbjct: 421 GNAMDLKNGRGILAPQPPLAQLPLPPPLPLYLSHNKRGKFHSGDTDHDGQGHGWQNDSHS 480
BLAST of Carg01085 vs. ExPASy TrEMBL
Match:
A0A6J1I614 (RING-type E3 ubiquitin transferase OS=Cucurbita maxima OX=3661 GN=LOC111470230 PE=4 SV=1)
HSP 1 Score: 881.3 bits (2276), Expect = 1.7e-252
Identity = 452/489 (92.43%), Postives = 453/489 (92.64%), Query Frame = 0
Query: 1 MLQIRLSKVPQAEGGAGAVKPLQAETVTVACPDHLILADLPVAKGIGAATAASIVKSVGR 60
MLQIRLSKVPQAEGGAGAVKPLQAETVTVACPDHLILADLPVAKGIGAATAASIVKSVGR
Sbjct: 1 MLQIRLSKVPQAEGGAGAVKPLQAETVTVACPDHLILADLPVAKGIGAATAASIVKSVGR 60
Query: 61 RSRRHLGERVHFCVRCDFPIAVYGRL--------------------------KIQTIKLM 120
RSRR LGERVHFCVRCDFPIAVYGRL KIQTIKLM
Sbjct: 61 RSRRQLGERVHFCVRCDFPIAVYGRLSPCEHVFCLDCARSDSICYLCDDRIQKIQTIKLM 120
Query: 121 EGIFICAAPHCLKSFLKRTEFESHIQESHADLLKPNAEKEDGNEIEALSAKQSTASESTV 180
EGIFICAAPHCLKSFLKRTEFESHIQESHA+LLKPNAE EDGNEIEALSAKQSTASESTV
Sbjct: 121 EGIFICAAPHCLKSFLKRTEFESHIQESHAELLKPNAEMEDGNEIEALSAKQSTASESTV 180
Query: 181 RGLSRPIISPSSNSQAQERDEKFHRQQSRDQPTSGMQQQDSGGHSQGFDRHGPHGRFPPQ 240
RG SRPIISPSSNSQAQE DEKFHRQQSRDQPTSGMQQQDSGGHSQGFDRHGPHGRFPPQ
Sbjct: 181 RGPSRPIISPSSNSQAQEHDEKFHRQQSRDQPTSGMQQQDSGGHSQGFDRHGPHGRFPPQ 240
Query: 241 NFDVQGTPHQESSQFSEKQQGILADPPYSQYPPLQSIPPPNYVVPANSNPMLSPPLPFGF 300
NFDVQG PHQESSQFSEKQQGILADPPYSQYPPLQSIPPPNYVVPANSNPMLSPPLPFGF
Sbjct: 241 NFDVQGPPHQESSQFSEKQQGILADPPYSQYPPLQSIPPPNYVVPANSNPMLSPPLPFGF 300
Query: 301 PPFPTEGAQQYYSTPYEVPRQDTAAETGSEQGSLLGFPPGAAGGMNFSATYSQPWNTGQA 360
PPFPTEGAQQYYSTPYEVPRQDTAAETGSEQGSLLGFPPGAAGGMNFSATY QPWNTGQA
Sbjct: 301 PPFPTEGAQQYYSTPYEVPRQDTAAETGSEQGSLLGFPPGAAGGMNFSATYPQPWNTGQA 360
Query: 361 GVPYEHAAGGQGMPDAFANAPDSQVNHGFYQGDYRRSPGGLPVNSSVSSMANKSMDLGHS 420
GVPYEHAAGGQGMPDAFANAPDSQVNHGFYQGDYRRSPGGLPVNSSVSSMANKSMDLGH
Sbjct: 361 GVPYEHAAGGQGMPDAFANAPDSQVNHGFYQGDYRRSPGGLPVNSSVSSMANKSMDLGHY 420
Query: 421 GNAMDLKNGRGILAPQPPLAQLPLPPPLPPYLSHNKRGKFHSGDTDHDGQGRGWQNDSHS 464
GNAMDLKNGRGILAPQPPLAQLPLPPP PPYLSHNK GKFHSGDTDHDGQG GWQNDSHS
Sbjct: 421 GNAMDLKNGRGILAPQPPLAQLPLPPPRPPYLSHNKHGKFHSGDTDHDGQGHGWQNDSHS 480
BLAST of Carg01085 vs. ExPASy TrEMBL
Match:
A0A6J1CWS1 (RING-type E3 ubiquitin transferase OS=Momordica charantia OX=3673 GN=LOC111015005 PE=4 SV=1)
HSP 1 Score: 772.3 bits (1993), Expect = 1.1e-219
Identity = 403/507 (79.49%), Postives = 424/507 (83.63%), Query Frame = 0
Query: 1 MLQIRLSKVPQAEGGAGAVKPLQAETVTVACPDHLILADLPVAKGIGAATAASIVKSVGR 60
MLQIRLSKVPQAEGGAGAVKPL AETVTVACPDHL+LADLPVAKGIGAATAASIVKSVGR
Sbjct: 1 MLQIRLSKVPQAEGGAGAVKPLPAETVTVACPDHLVLADLPVAKGIGAATAASIVKSVGR 60
Query: 61 RSRRHLGERVHFCVRCDFPIAVYGRL--------------------------KIQTIKLM 120
RSRR LGERVHFCVRCDFPIA+YGRL KIQTIKLM
Sbjct: 61 RSRRQLGERVHFCVRCDFPIAIYGRLSPCEHAFCLDCARSDSICYLCDDRIQKIQTIKLM 120
Query: 121 EGIFICAAPHCLKSFLKRTEFESHIQESHADLLKPNAEKEDGNEIEALSAKQSTASESTV 180
EGIFICAAPHCLKSFLKRTEFESHI ESHADLLKPNA+KEDGNEIEA SAKQSTASEST
Sbjct: 121 EGIFICAAPHCLKSFLKRTEFESHIHESHADLLKPNADKEDGNEIEAHSAKQSTASESTA 180
Query: 181 RGLSRPIISPSSNSQAQERDEKFHRQQSRDQPTSGMQQ----------------QDSGGH 240
RG SRPIISP SNSQ QER+EKFHRQQSRDQP SGMQQ Q GH
Sbjct: 181 RGPSRPIISPGSNSQLQEREEKFHRQQSRDQPRSGMQQKQAPNFGQNQNNPSESQPDSGH 240
Query: 241 SQGFDRHGPHGRFPPQNFDVQGTPHQESSQFSEKQQGILADPPYSQYPPLQSIPPPNYVV 300
SQGFDRHGPHGRFPPQNFD+QG PHQES+QFS+KQQGIL D P+SQYPPLQ IPPPNYVV
Sbjct: 241 SQGFDRHGPHGRFPPQNFDLQGGPHQESNQFSDKQQGILTDTPFSQYPPLQPIPPPNYVV 300
Query: 301 PANSNPMLSPPLPFGFPPFPTEGAQQYYSTPYEVPRQDTAAETGSEQGSLLGFPPGAAGG 360
P NSNPML+PPLPFG+PPFP EGAQQYYSTPYEV RQD A ++GSEQGSLLGFPPGAAGG
Sbjct: 301 PTNSNPMLTPPLPFGYPPFPIEGAQQYYSTPYEVSRQDAAVDSGSEQGSLLGFPPGAAGG 360
Query: 361 MNFSATYSQPWNTGQAGVPYEHAAGGQGMPDAFANAPDSQVNHGFYQGDYRRSPGGLPVN 420
MNFSATY Q WNTGQAG PY+HAAG QGMPD+F+N PDSQ HGFYQGDYRRSPGGLPVN
Sbjct: 361 MNFSATYPQSWNTGQAGAPYDHAAGSQGMPDSFSNTPDSQGKHGFYQGDYRRSPGGLPVN 420
Query: 421 SSVSSMANKSMDLGHSGNAMDLKNGRGILAPQPPLAQLPL--PPPLPPYLSHNKRGKFHS 464
SSVSSMANK MDLGH+G AMD + G+GILAPQP + QLPL PPP PPYLS +KRGKF+S
Sbjct: 421 SSVSSMANKGMDLGHAGTAMDFREGKGILAPQPTM-QLPLPPPPPPPPYLSQHKRGKFYS 480
BLAST of Carg01085 vs. ExPASy TrEMBL
Match:
A0A6J1J5I8 (RING-type E3 ubiquitin transferase OS=Cucurbita maxima OX=3661 GN=LOC111481547 PE=4 SV=1)
HSP 1 Score: 768.8 bits (1984), Expect = 1.3e-218
Identity = 402/507 (79.29%), Postives = 425/507 (83.83%), Query Frame = 0
Query: 1 MLQIRLSKVPQAEGGAGAVKPLQAETVTVACPDHLILADLPVAKGIGAATAASIVKSVGR 60
MLQIRLSKVPQAEGGAGAVKP AE+VTVACPDHL+LADLPVAKGIGAATAASIVKSVGR
Sbjct: 1 MLQIRLSKVPQAEGGAGAVKPSPAESVTVACPDHLVLADLPVAKGIGAATAASIVKSVGR 60
Query: 61 RSRRHLGERVHFCVRCDFPIAVYGRL--------------------------KIQTIKLM 120
RSRR LGERVHFCVRCDFPIA+YGRL KIQTIK+M
Sbjct: 61 RSRRQLGERVHFCVRCDFPIAIYGRLSPCEHAFCLDCARSDSLCYLCDDRIQKIQTIKMM 120
Query: 121 EGIFICAAPHCLKSFLKRTEFESHIQESHADLLKPNAEKEDGNEIEALSAKQSTASESTV 180
EGIFICAAPHCLKSFLKRT+FESHI ESHADLLKPNAEKEDGNEIEA SAKQSTASE++V
Sbjct: 121 EGIFICAAPHCLKSFLKRTDFESHIHESHADLLKPNAEKEDGNEIEAHSAKQSTASETSV 180
Query: 181 RGLSRPIISPSSNSQAQERDEKFHRQQSRDQPTSGMQQ----------------QDSGGH 240
R RP+ISP SNSQ QER+EKFHRQQSRDQP SGMQQ Q GH
Sbjct: 181 RCPLRPLISPGSNSQPQEREEKFHRQQSRDQPRSGMQQKQAPILGQNQINTSESQQDSGH 240
Query: 241 SQGFDRHGPHGRFPPQNFDVQGTPHQESSQFSEKQQGILADPPYSQYPPLQSIPPPNYVV 300
SQGFDRHGPHGRFPPQNFD QG PHQESSQFSEKQQGIL+D PYSQYPPLQ IPPPNYVV
Sbjct: 241 SQGFDRHGPHGRFPPQNFDAQGAPHQESSQFSEKQQGILSDTPYSQYPPLQPIPPPNYVV 300
Query: 301 PANSNPMLSPPLPFGFPPFPTEGAQQYYSTPYEVPRQDT-AAETGSEQGSLLGFPPGAAG 360
P NSNPML+PPLPFG+PPFP EGAQQYYSTPYEVPRQDT AAETGSEQGSLLGFPPGAAG
Sbjct: 301 PPNSNPMLTPPLPFGYPPFPVEGAQQYYSTPYEVPRQDTAAAETGSEQGSLLGFPPGAAG 360
Query: 361 GMNFSATYSQPWNTGQAGVPYEHAAGGQGMPDAFANAPDSQVNHGFYQGDYRRSPGGLPV 420
GMNFSATY PWN GQAG+PY+HAAGGQGMPDAFAN PDSQ HGFY GDYRRSPGG+PV
Sbjct: 361 GMNFSATYPHPWNAGQAGIPYDHAAGGQGMPDAFANTPDSQGKHGFYPGDYRRSPGGMPV 420
Query: 421 NSSVSSMANKSMDLGH-SGNAMDLKNGRGILAPQPPLAQLPLPPPLPPYLSHNKRGKFHS 464
NS+VSSMANK MD GH SG+ MDL++G+GILAPQ PL QLP PP PP+LSHNKRGKF+
Sbjct: 421 NSTVSSMANKGMDQGHASGSTMDLRDGKGILAPQ-PLIQLPPPPRPPPFLSHNKRGKFYP 480
BLAST of Carg01085 vs. ExPASy TrEMBL
Match:
A0A6J1F6T3 (RING-type E3 ubiquitin transferase OS=Cucurbita moschata OX=3662 GN=LOC111441395 PE=4 SV=1)
HSP 1 Score: 766.9 bits (1979), Expect = 4.8e-218
Identity = 400/507 (78.90%), Postives = 425/507 (83.83%), Query Frame = 0
Query: 1 MLQIRLSKVPQAEGGAGAVKPLQAETVTVACPDHLILADLPVAKGIGAATAASIVKSVGR 60
MLQIRLSKVPQAEGGAGAVKP AE+VTVACPDHL+LADLPVAKGIGAATAASIVKSVGR
Sbjct: 1 MLQIRLSKVPQAEGGAGAVKPSPAESVTVACPDHLVLADLPVAKGIGAATAASIVKSVGR 60
Query: 61 RSRRHLGERVHFCVRCDFPIAVYGRL--------------------------KIQTIKLM 120
RSRR LGERVHFCVRCDFPIA+YGRL KIQTIK+M
Sbjct: 61 RSRRQLGERVHFCVRCDFPIAIYGRLSPCEHAFCLDCARSDSLCYLCDDRIQKIQTIKMM 120
Query: 121 EGIFICAAPHCLKSFLKRTEFESHIQESHADLLKPNAEKEDGNEIEALSAKQSTASESTV 180
EGIFICAAPHCLKSFLKRT+FESHI ESHADLLKPNAEKEDGNEIEA SAKQSTASE++V
Sbjct: 121 EGIFICAAPHCLKSFLKRTDFESHIHESHADLLKPNAEKEDGNEIEAHSAKQSTASETSV 180
Query: 181 RGLSRPIISPSSNSQAQERDEKFHRQQSRDQPTSGMQQ----------------QDSGGH 240
RG RP+ISP SNSQ QER+EKFHRQQSRDQP SGMQQ Q GH
Sbjct: 181 RGPLRPLISPGSNSQPQEREEKFHRQQSRDQPRSGMQQKQAPILGQNQNNASESQQDSGH 240
Query: 241 SQGFDRHGPHGRFPPQNFDVQGTPHQESSQFSEKQQGILADPPYSQYPPLQSIPPPNYVV 300
SQGFDRHGPHGRFPPQNFD QG PHQESSQFSEKQQGIL+D PYSQYPPLQ IPPPNYVV
Sbjct: 241 SQGFDRHGPHGRFPPQNFDAQGAPHQESSQFSEKQQGILSDTPYSQYPPLQPIPPPNYVV 300
Query: 301 PANSNPMLSPPLPFGFPPFPTEGAQQYYSTPYEVPRQDT-AAETGSEQGSLLGFPPGAAG 360
P NSNPML+PPLPFG+PPFP EGAQ+YYS+PYEVPRQDT AAETGSEQGSLLGFPPGAAG
Sbjct: 301 PPNSNPMLTPPLPFGYPPFPVEGAQKYYSSPYEVPRQDTAAAETGSEQGSLLGFPPGAAG 360
Query: 361 GMNFSATYSQPWNTGQAGVPYEHAAGGQGMPDAFANAPDSQVNHGFYQGDYRRSPGGLPV 420
GMNFSATY PWN GQAG+PY+HAAGGQGMPDAFAN PDSQ HGFY GDYRRSPGG+PV
Sbjct: 361 GMNFSATYPHPWNAGQAGIPYDHAAGGQGMPDAFANTPDSQGKHGFYPGDYRRSPGGMPV 420
Query: 421 NSSVSSMANKSMDLGH-SGNAMDLKNGRGILAPQPPLAQLPLPPPLPPYLSHNKRGKFHS 464
NS+VSSMANK MD GH SG+ MDL++G+GILAPQ PL QLP PP PP+LSHNKRGKF+
Sbjct: 421 NSTVSSMANKGMDQGHASGSTMDLRDGKGILAPQ-PLIQLPPPPRPPPFLSHNKRGKFYP 480
BLAST of Carg01085 vs. TAIR 10
Match:
AT5G01160.1 (RING/U-box superfamily protein )
HSP 1 Score: 233.0 bits (593), Expect = 4.8e-61
Identity = 161/367 (43.87%), Postives = 201/367 (54.77%), Query Frame = 0
Query: 1 MLQIRLSKVPQAEGGAGAVKPLQAETVTVACPDHLILADLPVAKGIGAATAASIVKSVGR 60
MLQIRL + E G GA +P ETVTVACPDHL+LADLPVAKGIG+ T +++K VGR
Sbjct: 1 MLQIRLRRDSPTETGNGA-RPSPTETVTVACPDHLVLADLPVAKGIGSVTPTTVIKPVGR 60
Query: 61 RSRRHLGERVHFCVRCDFPIAVYGRL--------------------------KIQTIKLM 120
RSRR LGERVHFCVRCDFPIA+YGRL KIQTIK+M
Sbjct: 61 RSRRQLGERVHFCVRCDFPIAIYGRLIPCDHAFCLECARSDSICYLCDERIQKIQTIKMM 120
Query: 121 EGIFICAAPHCLKSFLKRTEFESHIQESHADLLKPNAEKEDGNEIEALSA-KQSTASEST 180
EGIFICAAPHCL+SFLK+ +FE+H+ + H LL+ +AEKEDGN+ + S +QS+ASEST
Sbjct: 121 EGIFICAAPHCLRSFLKKLDFEAHVHDLHGSLLQADAEKEDGNQSDVQSTMQQSSASEST 180
Query: 181 VRGLSRPIISPSSNSQAQERDEKFHRQQSRDQPTSGMQQQDSGGHSQGFDRHGPHGRFPP 240
+R P+ S S+ R F + QS GF+ P P
Sbjct: 181 LRA---PLRSQLQQSRELNRSASFAKSQSGFSQVQNYPPDSDNSRPPGFETASPK---PG 240
Query: 241 QNFDVQGTPHQESSQFSEKQQGILADPPYSQYPPLQSIPPPNYVVPANSNPMLSPPLPFG 300
F P Y Q P+ + PP+ VP N NP L P FG
Sbjct: 241 IRF-----------------------PDYPQ--PMNLMQPPSLPVPMNQNPGL--PQQFG 300
Query: 301 FPPFPTE---GAQQYYS-TPYEVPRQDTAAETGSEQGSLLGF-PPGAAGGMNFSATYSQP 335
FP +PT +QQ+++ YE+ R ++ GSEQ SLLG+ PP +NF +Y P
Sbjct: 301 FPSYPTTESGSSQQFFNGAQYEMTRTESG---GSEQSSLLGYPPPSPMTNLNFQGSYPPP 330
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
KAG7027916.1 | 9.1e-264 | 100.00 | hypothetical protein SDJN02_09095 [Cucurbita argyrosperma subsp. argyrosperma] | [more] |
KAG6596366.1 | 1.8e-259 | 94.68 | E3 ubiquitin-protein ligase HAKAI-like protein, partial [Cucurbita argyrosperma ... | [more] |
XP_022935351.1 | 9.1e-256 | 93.66 | E3 ubiquitin-protein ligase Hakai-like [Cucurbita moschata] >XP_022935435.1 E3 u... | [more] |
XP_023539354.1 | 4.2e-253 | 92.64 | E3 ubiquitin-protein ligase Hakai-like [Cucurbita pepo subsp. pepo] | [more] |
XP_022971545.1 | 3.6e-252 | 92.43 | E3 ubiquitin-protein ligase Hakai-like [Cucurbita maxima] >XP_022971546.1 E3 ubi... | [more] |
Match Name | E-value | Identity | Description | |
Q9LFC0 | 6.7e-60 | 43.87 | E3 ubiquitin-protein ligase HAKAI homolog OS=Arabidopsis thaliana OX=3702 GN=HAK... | [more] |
Match Name | E-value | Identity | Description | |
A0A6J1FAM2 | 4.4e-256 | 93.66 | RING-type E3 ubiquitin transferase OS=Cucurbita moschata OX=3662 GN=LOC111442234... | [more] |
A0A6J1I614 | 1.7e-252 | 92.43 | RING-type E3 ubiquitin transferase OS=Cucurbita maxima OX=3661 GN=LOC111470230 P... | [more] |
A0A6J1CWS1 | 1.1e-219 | 79.49 | RING-type E3 ubiquitin transferase OS=Momordica charantia OX=3673 GN=LOC11101500... | [more] |
A0A6J1J5I8 | 1.3e-218 | 79.29 | RING-type E3 ubiquitin transferase OS=Cucurbita maxima OX=3661 GN=LOC111481547 P... | [more] |
A0A6J1F6T3 | 4.8e-218 | 78.90 | RING-type E3 ubiquitin transferase OS=Cucurbita moschata OX=3662 GN=LOC111441395... | [more] |
Match Name | E-value | Identity | Description | |
AT5G01160.1 | 4.8e-61 | 43.87 | RING/U-box superfamily protein | [more] |