Carg13570 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg13570
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	H/ACA ribonucleoprotein complex non-core subunit NAF1
Location	Carg_Chr02: 641293 .. 643733 (+)
RNA-Seq Expression	Carg13570
Synteny	Carg13570

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

GTTTAAGAAACCAGCTCTCCGCCTTCAAATCCACAGCCACCGCTATTTACAGTGCTGCCGCTGCCCGTCTTTTTCTTCTTCTTAAAGCTATGTTTACGCTTCTTCTCTCTCAATCAAGTCCCAATTTTGTAGCTCTGCAATGGTAGAGCTTTCATCCAACTCCACCACTGCGTCTGCGCCTGCGCCTGACGGCCTCCTTCACGCTTCTTCTAAGCTTAAGAACTCGGAGCCGCTTCCGCTTGACTCTTTTGATTCCAAGCCCGTCGATTACTCCTTTGCCGATTCCTTCCTTGATTACGATTCCTTAAACGACTGGATTGACGAATTTACATCTCCTGTTATGGCTGATGCACAAGCGATTCTTCCTGAAGCGGAATCCCATGTGAATCAACTAGTCGAAAAGTCTGTTCCAATTGTTGGTGAAATTCAGCCGATTGCGCAGGCGGAAGGTGAGGCTTGTGGTAAGTCTACGGATTTGAATTGCATCATTGAGGAAGGGATGTCGAAGGTTAGTTTGGTTATTGATGGAGGAAGCACTGGAAACATTGAGTCGGATTCTCGAGAGGATGATGATGAAAGTGACGTTGAGTCCGAGGGCACAAGTTCAGCTTCAACGTCTAGTGATAGTAGTAGCTCTAGCGGAAGCAGTGATGATGAAAAAGATGAGGAAGAAAGTTCATCGTCTTCAAGTAGCGGCGACAGCAGCTGCGATGATGATGTAGAGACGGAGGAGAACTCTGTAAAAGCGGATGTACACACAGAAATCGGTGAACTTGAAGAAGGTGAGATAAGTGACGCTGACAATGAAGACAAGGAGGCCTCTGCAGATGACATGGTTGCGTGGGATGGTGATGGTGAGGAACTAGACGAAGAAGATGAGGCTGGACCTGAGGGAGGTCCGATTAGTTCTAAAAACGAGCTTAAGGTCAGTTTTCTTTGTTCATCCTTAAGCTTGCAAGTAGTTTTGGAGACACATGGCTGATGTTGCTTGGGGTAATTGATCAATAATAGGTTCATTATTTCTTATTGGCTTCCTTGTAGGTTCTTCCTCCAGTTCCTCAGGTGCATGCAACGCTGCAGCCACACCACCAGATGGTTCCTGTTGGAGTTGTTTTGTCGGTAAGTTCCTTAATTTGAATAGAATTGTACATCAAAGAGTACAACAATTCTATCAACATCTGCCCATTACATGGTTTCCTTACTTGTGAAACTAAATTATCCATAAGAAGCTTGTGAATTGTGATGAACTTTCTACGTTTCAGATAATTGGCAGTCAAGTCATTGTAGAGGGTGTTGAGAAGCACAATCCTCTAAACGAAGGCTCTATCCTGTGGCTAACTGTAGCTAGATCCCCATTGGGGTTGGTAGACGAGATTTTTGGACCAGTAAAAAATCCTTATTATTCAGTAAGATACAATTCTGAAAGTGAAGTCCCTACTGGAATAAGTAGTGGCACTCACGTCTCCTTTGTTCTGGAGTTTGCCGATTATGTGCTCAACAACAAAGACCTGTACAAGAAGGGGTACGATGCATCTGGAGCGAACGATGAAGAGGTGTCTGACAACGAGTTTTCAGATGATGAGAAAGAGCTCGAGTTCAAGAAGATGCAAAAGCTGGCTAAGAGGGGTATGAATGACAACCAACAGACTAATGAGAACAGAAATAATGCTAGGAAGAAGAAAAACAATGCTAAAGCCAGGAAATTTGGTCAGCGTACATTTGAGACACCGCAGGAACATGACAAGTCCAGGAATTACGGCCAGTCCATGCCCCAGCAAGCAACAGTTCCTGAAGGCAGCAAGTTTGATCAGCCAGCACCTCAACAAGTAAAGATGGATATGGCTCAGTCATTCTCCAATCAGAATCAGCACACTGGCCCTCCTTTGGCGCCGTTTGTATATCACGGTGGTTATCCAAACCCTTCAGCTTCTGAACAACGTTTTATCAATGGACCTGGTGTTATGCCATCATTTCCTCCAGCGTTCAACCCCTGCTTTTCCCCAGCAATGAACGGAATTAGGCCAGCAGAAATGCCATTTCAGTTTCAGCAGCAGCAGCAGCAGCAGCAGAATCCATTATTTCCCAACGGTCTTCCAATGAACGGCATGCCCTGGCTATTACAGAATCCGGTACAGCAGGTGCCTCAGCCTCAAATGCCTATGATGAATACATTTGCTGGAGCTCCATATCCGCCGGGGTTTGTAGGTACATCATCCGCCCTACCTAATCCCCTCACAGCCGTAGGGGCACAAGGAATCCATTCCGGTGGAGTACAGTTTGGACAGAATCAAAACATGCACCCTCCAACACAGCAATTCAATCGTTCAAACCCGCACCCACCTGTACCATTCCAAGGAAATGTAGCACCAGAGCAATTCAACCAAGGCTCGTCTTCGAACCGGGGAAGGAAATCGTATGGTCGAGGTGGACCTCATTTTAGA

mRNA sequence

GTTTAAGAAACCAGCTCTCCGCCTTCAAATCCACAGCCACCGCTATTTACAGTGCTGCCGCTGCCCGTCTTTTTCTTCTTCTTAAAGCTATGTTTACGCTTCTTCTCTCTCAATCAAGTCCCAATTTTGTAGCTCTGCAATGGTAGAGCTTTCATCCAACTCCACCACTGCGTCTGCGCCTGCGCCTGACGGCCTCCTTCACGCTTCTTCTAAGCTTAAGAACTCGGAGCCGCTTCCGCTTGACTCTTTTGATTCCAAGCCCGTCGATTACTCCTTTGCCGATTCCTTCCTTGATTACGATTCCTTAAACGACTGGATTGACGAATTTACATCTCCTGTTATGGCTGATGCACAAGCGATTCTTCCTGAAGCGGAATCCCATGTGAATCAACTAGTCGAAAAGTCTGTTCCAATTGTTGGTGAAATTCAGCCGATTGCGCAGGCGGAAGGTGAGGCTTGTGGTAAGTCTACGGATTTGAATTGCATCATTGAGGAAGGGATGTCGAAGGTTAGTTTGGTTATTGATGGAGGAAGCACTGGAAACATTGAGTCGGATTCTCGAGAGGATGATGATGAAAGTGACGTTGAGTCCGAGGGCACAAGTTCAGCTTCAACGTCTAGTGATAGTAGTAGCTCTAGCGGAAGCAGTGATGATGAAAAAGATGAGGAAGAAAGTTCATCGTCTTCAAGTAGCGGCGACAGCAGCTGCGATGATGATGTAGAGACGGAGGAGAACTCTGTAAAAGCGGATGTACACACAGAAATCGGTGAACTTGAAGAAGGTGAGATAAGTGACGCTGACAATGAAGACAAGGAGGCCTCTGCAGATGACATGGTTGCGTGGGATGGTGATGGTGAGGAACTAGACGAAGAAGATGAGGCTGGACCTGAGGGAGGTCCGATTAGTTCTAAAAACGAGCTTAAGGTTCTTCCTCCAGTTCCTCAGGTGCATGCAACGCTGCAGCCACACCACCAGATGGTTCCTGTTGGAGTTGTTTTGTCGATAATTGGCAGTCAAGTCATTGTAGAGGGTGTTGAGAAGCACAATCCTCTAAACGAAGGCTCTATCCTGTGGCTAACTGTAGCTAGATCCCCATTGGGGTTGGTAGACGAGATTTTTGGACCAGTAAAAAATCCTTATTATTCAGTAAGATACAATTCTGAAAGTGAAGTCCCTACTGGAATAAGTAGTGGCACTCACGTCTCCTTTGTTCTGGAGTTTGCCGATTATGTGCTCAACAACAAAGACCTGTACAAGAAGGGGTACGATGCATCTGGAGCGAACGATGAAGAGGTGTCTGACAACGAGTTTTCAGATGATGAGAAAGAGCTCGAGTTCAAGAAGATGCAAAAGCTGGCTAAGAGGGGTATGAATGACAACCAACAGACTAATGAGAACAGAAATAATGCTAGGAAGAAGAAAAACAATGCTAAAGCCAGGAAATTTGGTCAGCGTACATTTGAGACACCGCAGGAACATGACAAGTCCAGGAATTACGGCCAGTCCATGCCCCAGCAAGCAACAGTTCCTGAAGGCAGCAAGTTTGATCAGCCAGCACCTCAACAAGTAAAGATGGATATGGCTCAGTCATTCTCCAATCAGAATCAGCACACTGGCCCTCCTTTGGCGCCGTTTGTATATCACGGTGGTTATCCAAACCCTTCAGCTTCTGAACAACGTTTTATCAATGGACCTGGTGTTATGCCATCATTTCCTCCAGCGTTCAACCCCTGCTTTTCCCCAGCAATGAACGGAATTAGGCCAGCAGAAATGCCATTTCAGTTTCAGCAGCAGCAGCAGCAGCAGCAGAATCCATTATTTCCCAACGGTCTTCCAATGAACGGCATGCCCTGGCTATTACAGAATCCGGTACAGCAGGTGCCTCAGCCTCAAATGCCTATGATGAATACATTTGCTGGAGCTCCATATCCGCCGGGGTTTGTAGGTACATCATCCGCCCTACCTAATCCCCTCACAGCCGTAGGGGCACAAGGAATCCATTCCGGTGGAGTACAGTTTGGACAGAATCAAAACATGCACCCTCCAACACAGCAATTCAATCGTTCAAACCCGCACCCACCTGTACCATTCCAAGGAAATGTAGCACCAGAGCAATTCAACCAAGGCTCGTCTTCGAACCGGGGAAGGAAATCGTATGGTCGAGGTGGACCTCATTTTAGA

Coding sequence (CDS)

ATGGTAGAGCTTTCATCCAACTCCACCACTGCGTCTGCGCCTGCGCCTGACGGCCTCCTTCACGCTTCTTCTAAGCTTAAGAACTCGGAGCCGCTTCCGCTTGACTCTTTTGATTCCAAGCCCGTCGATTACTCCTTTGCCGATTCCTTCCTTGATTACGATTCCTTAAACGACTGGATTGACGAATTTACATCTCCTGTTATGGCTGATGCACAAGCGATTCTTCCTGAAGCGGAATCCCATGTGAATCAACTAGTCGAAAAGTCTGTTCCAATTGTTGGTGAAATTCAGCCGATTGCGCAGGCGGAAGGTGAGGCTTGTGGTAAGTCTACGGATTTGAATTGCATCATTGAGGAAGGGATGTCGAAGGTTAGTTTGGTTATTGATGGAGGAAGCACTGGAAACATTGAGTCGGATTCTCGAGAGGATGATGATGAAAGTGACGTTGAGTCCGAGGGCACAAGTTCAGCTTCAACGTCTAGTGATAGTAGTAGCTCTAGCGGAAGCAGTGATGATGAAAAAGATGAGGAAGAAAGTTCATCGTCTTCAAGTAGCGGCGACAGCAGCTGCGATGATGATGTAGAGACGGAGGAGAACTCTGTAAAAGCGGATGTACACACAGAAATCGGTGAACTTGAAGAAGGTGAGATAAGTGACGCTGACAATGAAGACAAGGAGGCCTCTGCAGATGACATGGTTGCGTGGGATGGTGATGGTGAGGAACTAGACGAAGAAGATGAGGCTGGACCTGAGGGAGGTCCGATTAGTTCTAAAAACGAGCTTAAGGTTCTTCCTCCAGTTCCTCAGGTGCATGCAACGCTGCAGCCACACCACCAGATGGTTCCTGTTGGAGTTGTTTTGTCGATAATTGGCAGTCAAGTCATTGTAGAGGGTGTTGAGAAGCACAATCCTCTAAACGAAGGCTCTATCCTGTGGCTAACTGTAGCTAGATCCCCATTGGGGTTGGTAGACGAGATTTTTGGACCAGTAAAAAATCCTTATTATTCAGTAAGATACAATTCTGAAAGTGAAGTCCCTACTGGAATAAGTAGTGGCACTCACGTCTCCTTTGTTCTGGAGTTTGCCGATTATGTGCTCAACAACAAAGACCTGTACAAGAAGGGGTACGATGCATCTGGAGCGAACGATGAAGAGGTGTCTGACAACGAGTTTTCAGATGATGAGAAAGAGCTCGAGTTCAAGAAGATGCAAAAGCTGGCTAAGAGGGGTATGAATGACAACCAACAGACTAATGAGAACAGAAATAATGCTAGGAAGAAGAAAAACAATGCTAAAGCCAGGAAATTTGGTCAGCGTACATTTGAGACACCGCAGGAACATGACAAGTCCAGGAATTACGGCCAGTCCATGCCCCAGCAAGCAACAGTTCCTGAAGGCAGCAAGTTTGATCAGCCAGCACCTCAACAAGTAAAGATGGATATGGCTCAGTCATTCTCCAATCAGAATCAGCACACTGGCCCTCCTTTGGCGCCGTTTGTATATCACGGTGGTTATCCAAACCCTTCAGCTTCTGAACAACGTTTTATCAATGGACCTGGTGTTATGCCATCATTTCCTCCAGCGTTCAACCCCTGCTTTTCCCCAGCAATGAACGGAATTAGGCCAGCAGAAATGCCATTTCAGTTTCAGCAGCAGCAGCAGCAGCAGCAGAATCCATTATTTCCCAACGGTCTTCCAATGAACGGCATGCCCTGGCTATTACAGAATCCGGTACAGCAGGTGCCTCAGCCTCAAATGCCTATGATGAATACATTTGCTGGAGCTCCATATCCGCCGGGGTTTGTAGGTACATCATCCGCCCTACCTAATCCCCTCACAGCCGTAGGGGCACAAGGAATCCATTCCGGTGGAGTACAGTTTGGACAGAATCAAAACATGCACCCTCCAACACAGCAATTCAATCGTTCAAACCCGCACCCACCTGTACCATTCCAAGGAAATGTAGCACCAGAGCAATTCAACCAAGGCTCGTCTTCGAACCGGGGAAGGAAATCGTATGGTCGAGGTGGACCTCATTTTAGA

Protein sequence

MVELSSNSTTASAPAPDGLLHASSKLKNSEPLPLDSFDSKPVDYSFADSFLDYDSLNDWIDEFTSPVMADAQAILPEAESHVNQLVEKSVPIVGEIQPIAQAEGEACGKSTDLNCIIEEGMSKVSLVIDGGSTGNIESDSREDDDESDVESEGTSSASTSSDSSSSSGSSDDEKDEEESSSSSSSGDSSCDDDVETEENSVKADVHTEIGELEEGEISDADNEDKEASADDMVAWDGDGEELDEEDEAGPEGGPISSKNELKVLPPVPQVHATLQPHHQMVPVGVVLSIIGSQVIVEGVEKHNPLNEGSILWLTVARSPLGLVDEIFGPVKNPYYSVRYNSESEVPTGISSGTHVSFVLEFADYVLNNKDLYKKGYDASGANDEEVSDNEFSDDEKELEFKKMQKLAKRGMNDNQQTNENRNNARKKKNNAKARKFGQRTFETPQEHDKSRNYGQSMPQQATVPEGSKFDQPAPQQVKMDMAQSFSNQNQHTGPPLAPFVYHGGYPNPSASEQRFINGPGVMPSFPPAFNPCFSPAMNGIRPAEMPFQFQQQQQQQQNPLFPNGLPMNGMPWLLQNPVQQVPQPQMPMMNTFAGAPYPPGFVGTSSALPNPLTAVGAQGIHSGGVQFGQNQNMHPPTQQFNRSNPHPPVPFQGNVAPEQFNQGSSSNRGRKSYGRGGPHFR

Homology

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BLAST of Carg13570 vs. NCBI nr
Match: KAG7034929.1 (H/ACA ribonucleoprotein complex non-core subunit NAF1, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 1301.6 bits (3367), Expect = 0.0e+00
Identity = 681/681 (100.00%), Postives = 681/681 (100.00%), Query Frame = 0


Query: 1   MVELSSNSTTASAPAPDGLLHASSKLKNSEPLPLDSFDSKPVDYSFADSFLDYDSLNDWI 60
           MVELSSNSTTASAPAPDGLLHASSKLKNSEPLPLDSFDSKPVDYSFADSFLDYDSLNDWI
Sbjct: 1   MVELSSNSTTASAPAPDGLLHASSKLKNSEPLPLDSFDSKPVDYSFADSFLDYDSLNDWI 60

Query: 61  DEFTSPVMADAQAILPEAESHVNQLVEKSVPIVGEIQPIAQAEGEACGKSTDLNCIIEEG 120
           DEFTSPVMADAQAILPEAESHVNQLVEKSVPIVGEIQPIAQAEGEACGKSTDLNCIIEEG
Sbjct: 61  DEFTSPVMADAQAILPEAESHVNQLVEKSVPIVGEIQPIAQAEGEACGKSTDLNCIIEEG 120

Query: 121 MSKVSLVIDGGSTGNIESDSREDDDESDVESEGTSSASTSSDSSSSSGSSDDEKDEEESS 180
           MSKVSLVIDGGSTGNIESDSREDDDESDVESEGTSSASTSSDSSSSSGSSDDEKDEEESS
Sbjct: 121 MSKVSLVIDGGSTGNIESDSREDDDESDVESEGTSSASTSSDSSSSSGSSDDEKDEEESS 180

Query: 181 SSSSSGDSSCDDDVETEENSVKADVHTEIGELEEGEISDADNEDKEASADDMVAWDGDGE 240
           SSSSSGDSSCDDDVETEENSVKADVHTEIGELEEGEISDADNEDKEASADDMVAWDGDGE
Sbjct: 181 SSSSSGDSSCDDDVETEENSVKADVHTEIGELEEGEISDADNEDKEASADDMVAWDGDGE 240

Query: 241 ELDEEDEAGPEGGPISSKNELKVLPPVPQVHATLQPHHQMVPVGVVLSIIGSQVIVEGVE 300
           ELDEEDEAGPEGGPISSKNELKVLPPVPQVHATLQPHHQMVPVGVVLSIIGSQVIVEGVE
Sbjct: 241 ELDEEDEAGPEGGPISSKNELKVLPPVPQVHATLQPHHQMVPVGVVLSIIGSQVIVEGVE 300

Query: 301 KHNPLNEGSILWLTVARSPLGLVDEIFGPVKNPYYSVRYNSESEVPTGISSGTHVSFVLE 360
           KHNPLNEGSILWLTVARSPLGLVDEIFGPVKNPYYSVRYNSESEVPTGISSGTHVSFVLE
Sbjct: 301 KHNPLNEGSILWLTVARSPLGLVDEIFGPVKNPYYSVRYNSESEVPTGISSGTHVSFVLE 360

Query: 361 FADYVLNNKDLYKKGYDASGANDEEVSDNEFSDDEKELEFKKMQKLAKRGMNDNQQTNEN 420
           FADYVLNNKDLYKKGYDASGANDEEVSDNEFSDDEKELEFKKMQKLAKRGMNDNQQTNEN
Sbjct: 361 FADYVLNNKDLYKKGYDASGANDEEVSDNEFSDDEKELEFKKMQKLAKRGMNDNQQTNEN 420

Query: 421 RNNARKKKNNAKARKFGQRTFETPQEHDKSRNYGQSMPQQATVPEGSKFDQPAPQQVKMD 480
           RNNARKKKNNAKARKFGQRTFETPQEHDKSRNYGQSMPQQATVPEGSKFDQPAPQQVKMD
Sbjct: 421 RNNARKKKNNAKARKFGQRTFETPQEHDKSRNYGQSMPQQATVPEGSKFDQPAPQQVKMD 480

Query: 481 MAQSFSNQNQHTGPPLAPFVYHGGYPNPSASEQRFINGPGVMPSFPPAFNPCFSPAMNGI 540
           MAQSFSNQNQHTGPPLAPFVYHGGYPNPSASEQRFINGPGVMPSFPPAFNPCFSPAMNGI
Sbjct: 481 MAQSFSNQNQHTGPPLAPFVYHGGYPNPSASEQRFINGPGVMPSFPPAFNPCFSPAMNGI 540

Query: 541 RPAEMPFQFQQQQQQQQNPLFPNGLPMNGMPWLLQNPVQQVPQPQMPMMNTFAGAPYPPG 600
           RPAEMPFQFQQQQQQQQNPLFPNGLPMNGMPWLLQNPVQQVPQPQMPMMNTFAGAPYPPG
Sbjct: 541 RPAEMPFQFQQQQQQQQNPLFPNGLPMNGMPWLLQNPVQQVPQPQMPMMNTFAGAPYPPG 600

Query: 601 FVGTSSALPNPLTAVGAQGIHSGGVQFGQNQNMHPPTQQFNRSNPHPPVPFQGNVAPEQF 660
           FVGTSSALPNPLTAVGAQGIHSGGVQFGQNQNMHPPTQQFNRSNPHPPVPFQGNVAPEQF
Sbjct: 601 FVGTSSALPNPLTAVGAQGIHSGGVQFGQNQNMHPPTQQFNRSNPHPPVPFQGNVAPEQF 660

Query: 661 NQGSSSNRGRKSYGRGGPHFR 682
           NQGSSSNRGRKSYGRGGPHFR
Sbjct: 661 NQGSSSNRGRKSYGRGGPHFR 681

[Close]

BLAST of Carg13570 vs. NCBI nr
Match: KAG6604811.1 (H/ACA ribonucleoprotein complex non-core subunit NAF1, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 1292.7 bits (3344), Expect = 0.0e+00
Identity = 677/681 (99.41%), Postives = 678/681 (99.56%), Query Frame = 0


Query: 1   MVELSSNSTTASAPAPDGLLHASSKLKNSEPLPLDSFDSKPVDYSFADSFLDYDSLNDWI 60
           MVELSSNSTTASAPAPDGLLHASSKLKNSEPLPLDSFDSKPVDYSFADSFLDYDSLNDWI
Sbjct: 1   MVELSSNSTTASAPAPDGLLHASSKLKNSEPLPLDSFDSKPVDYSFADSFLDYDSLNDWI 60

Query: 61  DEFTSPVMADAQAILPEAESHVNQLVEKSVPIVGEIQPIAQAEGEACGKSTDLNCIIEEG 120
           DEFTSPVMADAQAILPEAESHVNQLVEKSVPIVGEIQPIAQAEGEACGKSTDLNCIIEEG
Sbjct: 61  DEFTSPVMADAQAILPEAESHVNQLVEKSVPIVGEIQPIAQAEGEACGKSTDLNCIIEEG 120

Query: 121 MSKVSLVIDGGSTGNIESDSREDDDESDVESEGTSSASTSSDSSSSSGSSDDEKDEEESS 180
           MSKVSLVIDGGSTGNIESDSREDDDESDVESEGTSSASTSSDSSSSSGSSDDEKDEEESS
Sbjct: 121 MSKVSLVIDGGSTGNIESDSREDDDESDVESEGTSSASTSSDSSSSSGSSDDEKDEEESS 180

Query: 181 SSSSSGDSSCDDDVETEENSVKADVHTEIGELEEGEISDADNEDKEASADDMVAWDGDGE 240
           SSSSSGDSSCDDDVETEENSVKADVHTEIGELEEGEISDADNEDKEASADDMVAWDGDGE
Sbjct: 181 SSSSSGDSSCDDDVETEENSVKADVHTEIGELEEGEISDADNEDKEASADDMVAWDGDGE 240

Query: 241 ELDEEDEAGPEGGPISSKNELKVLPPVPQVHATLQPHHQMVPVGVVLSIIGSQVIVEGVE 300
           ELDEEDEAGPEGGPISSKNELKVLPPVPQVHATLQPHHQMVPVGVVLSIIGSQVIVEGVE
Sbjct: 241 ELDEEDEAGPEGGPISSKNELKVLPPVPQVHATLQPHHQMVPVGVVLSIIGSQVIVEGVE 300

Query: 301 KHNPLNEGSILWLTVARSPLGLVDEIFGPVKNPYYSVRYNSESEVPTGISSGTHVSFVLE 360
           KHNPLNEGSILWLTVARSPLGLVDEIFGPVKNPYYSVRYNSESEVPTGISSGTHVSFVLE
Sbjct: 301 KHNPLNEGSILWLTVARSPLGLVDEIFGPVKNPYYSVRYNSESEVPTGISSGTHVSFVLE 360

Query: 361 FADYVLNNKDLYKKGYDASGANDEEVSDNEFSDDEKELEFKKMQKLAKRGMNDNQQTNEN 420
           FADYVLNNKDLYKKGYDASGANDEEVSDNEFSDDEKELEFKKMQKLAKRGMNDNQQ NEN
Sbjct: 361 FADYVLNNKDLYKKGYDASGANDEEVSDNEFSDDEKELEFKKMQKLAKRGMNDNQQINEN 420

Query: 421 RNNARKKKNNAKARKFGQRTFETPQEHDKSRNYGQSMPQQATVPEGSKFDQPAPQQVKMD 480
           RNNARKKKNNAKARKFGQRTFETPQEHDKSRNYGQSMPQQATVPEGSKFDQPAPQQVKMD
Sbjct: 421 RNNARKKKNNAKARKFGQRTFETPQEHDKSRNYGQSMPQQATVPEGSKFDQPAPQQVKMD 480

Query: 481 MAQSFSNQNQHTGPPLAPFVYHGGYPNPSASEQRFINGPGVMPSFPPAFNPCFSPAMNGI 540
           MAQSFSNQNQHTGPPLAPFVYHGGYPNPSASEQRFINGPGVMPSFPPAFNPCF PAMNGI
Sbjct: 481 MAQSFSNQNQHTGPPLAPFVYHGGYPNPSASEQRFINGPGVMPSFPPAFNPCFPPAMNGI 540

Query: 541 RPAEMPFQFQQQQQQQQNPLFPNGLPMNGMPWLLQNPVQQVPQPQMPMMNTFAGAPYPPG 600
           RPAEMPFQFQQQQQQQQNPLFPNGLPMNGMPWLLQNPVQQVPQPQMPMMNTFAGAPYPPG
Sbjct: 541 RPAEMPFQFQQQQQQQQNPLFPNGLPMNGMPWLLQNPVQQVPQPQMPMMNTFAGAPYPPG 600

Query: 601 FVGTSSALPNPLTAVGAQGIHSGGVQFGQNQNMHPPTQQFNRSNPHPPVPFQGNVAPEQF 660
           FVGTSSALPNPLTAVG+QGIHSGGVQFGQNQNMHPPTQQFNRSN HPPVPFQGNVAPEQF
Sbjct: 601 FVGTSSALPNPLTAVGSQGIHSGGVQFGQNQNMHPPTQQFNRSNRHPPVPFQGNVAPEQF 660

Query: 661 NQGSSSNRGRKSYGRGGPHFR 682
           NQGSSSNRGRKSYGRGGPHFR
Sbjct: 661 NQGSSSNRGRKSYGRGGPHFR 681

[Close]

BLAST of Carg13570 vs. NCBI nr
Match: XP_022947448.1 (H/ACA ribonucleoprotein complex non-core subunit NAF1 [Cucurbita moschata])

HSP 1 Score: 1281.9 bits (3316), Expect = 0.0e+00
Identity = 673/681 (98.83%), Postives = 675/681 (99.12%), Query Frame = 0


Query: 1   MVELSSNSTTASAPAPDGLLHASSKLKNSEPLPLDSFDSKPVDYSFADSFLDYDSLNDWI 60
           MVELSSNSTTASAPAPDGLLHASSKLKNSEPLPLDSFDSKPVDYSFADSFLDYDSLNDWI
Sbjct: 1   MVELSSNSTTASAPAPDGLLHASSKLKNSEPLPLDSFDSKPVDYSFADSFLDYDSLNDWI 60

Query: 61  DEFTSPVMADAQAILPEAESHVNQLVEKSVPIVGEIQPIAQAEGEACGKSTDLNCIIEEG 120
           DEFTSPVMADAQ+ILPEAESHVNQ VEKSVPIVGEIQP AQAEGEACGKSTDLNCIIEEG
Sbjct: 61  DEFTSPVMADAQSILPEAESHVNQPVEKSVPIVGEIQPTAQAEGEACGKSTDLNCIIEEG 120

Query: 121 MSKVSLVIDGGSTGNIESDSREDDDESDVESEGTSSASTSSDSSSSSGSSDDEKDEEESS 180
           MSKVSLVIDGGSTGNIESDSREDDDESDVESEGTSSASTSSDSSSSSGSSDDEKDEEESS
Sbjct: 121 MSKVSLVIDGGSTGNIESDSREDDDESDVESEGTSSASTSSDSSSSSGSSDDEKDEEESS 180

Query: 181 SSSSSGDSSCDDDVETEENSVKADVHTEIGELEEGEISDADNEDKEASADDMVAWDGDGE 240
           SSSSSGDSSCDDDVETEENSVKADVHTEIGELEEGEISDADNEDKEASADDMVAWDGDGE
Sbjct: 181 SSSSSGDSSCDDDVETEENSVKADVHTEIGELEEGEISDADNEDKEASADDMVAWDGDGE 240

Query: 241 ELDEEDEAGPEGGPISSKNELKVLPPVPQVHATLQPHHQMVPVGVVLSIIGSQVIVEGVE 300
           ELDEEDEAGPEGGPISSKNELKVLPPVPQVHATLQPHHQMVPVGVVLSIIGSQVIVEGVE
Sbjct: 241 ELDEEDEAGPEGGPISSKNELKVLPPVPQVHATLQPHHQMVPVGVVLSIIGSQVIVEGVE 300

Query: 301 KHNPLNEGSILWLTVARSPLGLVDEIFGPVKNPYYSVRYNSESEVPTGISSGTHVSFVLE 360
           KHNPLNEGSILWLTVARSPLGLVDEIFGPVKNPYYSVRYNSESEVPTGISSGTHVSFVLE
Sbjct: 301 KHNPLNEGSILWLTVARSPLGLVDEIFGPVKNPYYSVRYNSESEVPTGISSGTHVSFVLE 360

Query: 361 FADYVLNNKDLYKKGYDASGANDEEVSDNEFSDDEKELEFKKMQKLAKRGMNDNQQTNEN 420
           FADYVLNNKDLYKKGYDASGANDEEVSDNEFSDDEKELEFKKMQKLAKRGMNDNQQ NEN
Sbjct: 361 FADYVLNNKDLYKKGYDASGANDEEVSDNEFSDDEKELEFKKMQKLAKRGMNDNQQINEN 420

Query: 421 RNNARKKKNNAKARKFGQRTFETPQEHDKSRNYGQSMPQQATVPEGSKFDQPAPQQVKMD 480
           RNNARKKKNNAKARKFGQRTFETPQEHDKSRNYGQSMPQQATVPEGSKFDQPAPQQVKMD
Sbjct: 421 RNNARKKKNNAKARKFGQRTFETPQEHDKSRNYGQSMPQQATVPEGSKFDQPAPQQVKMD 480

Query: 481 MAQSFSNQNQHTGPPLAPFVYHGGYPNPSASEQRFINGPGVMPSFPPAFNPCFSPAMNGI 540
           MAQSFSNQNQHTGPPLAPFVYHGGYPNPSASEQRFINGPGVMPSFPPA+NPCF PAMNGI
Sbjct: 481 MAQSFSNQNQHTGPPLAPFVYHGGYPNPSASEQRFINGPGVMPSFPPAYNPCFPPAMNGI 540

Query: 541 RPAEMPFQFQQQQQQQQNPLFPNGLPMNGMPWLLQNPVQQVPQPQMPMMNTFAGAPYPPG 600
           RPAEMPFQF  QQQQQQNPLFPNGLPMNGMPWLLQNPVQQVPQPQMPMMNTFAGAPYPPG
Sbjct: 541 RPAEMPFQF--QQQQQQNPLFPNGLPMNGMPWLLQNPVQQVPQPQMPMMNTFAGAPYPPG 600

Query: 601 FVGTSSALPNPLTAVGAQGIHSGGVQFGQNQNMHPPTQQFNRSNPHPPVPFQGNVAPEQF 660
           FVGTSSALPNPLTAVGAQGIHSGGVQFGQNQNMHPPTQQFNRSNPHPPVPFQGNVAPEQF
Sbjct: 601 FVGTSSALPNPLTAVGAQGIHSGGVQFGQNQNMHPPTQQFNRSNPHPPVPFQGNVAPEQF 660

Query: 661 NQGSSSNRGRKSYGRGGPHFR 682
           NQGSSSNRGRKSYGRGGPHFR
Sbjct: 661 NQGSSSNRGRKSYGRGGPHFR 679

[Close]

BLAST of Carg13570 vs. NCBI nr
Match: XP_023533326.1 (H/ACA ribonucleoprotein complex non-core subunit NAF1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 1266.9 bits (3277), Expect = 0.0e+00
Identity = 667/681 (97.94%), Postives = 671/681 (98.53%), Query Frame = 0


Query: 1   MVELSSNSTTASAPAPDGLLHASSKLKNSEPLPLDSFDSKPVDYSFADSFLDYDSLNDWI 60
           MVELSSNSTTAS  APDGLLHASSKLKNSEPLPLDSFDSKPVDYSFADSFLDYDSL DWI
Sbjct: 1   MVELSSNSTTAS--APDGLLHASSKLKNSEPLPLDSFDSKPVDYSFADSFLDYDSLTDWI 60

Query: 61  DEFTSPVMADAQAILPEAESHVNQLVEKSVPIVGEIQPIAQAEGEACGKSTDLNCIIEEG 120
           DEFTSPVMADAQ ILPEAESHVNQLVEKSVPIVGEIQPIAQAEGEACGKSTDLNCIIEEG
Sbjct: 61  DEFTSPVMADAQTILPEAESHVNQLVEKSVPIVGEIQPIAQAEGEACGKSTDLNCIIEEG 120

Query: 121 MSKVSLVIDGGSTGNIESDSREDDDESDVESEGTSSASTSSDSSSSSGSSDDEKDEEESS 180
           MSKVSLVIDGGSTGNIESDSREDDD+SDVESEGTSSASTSSDSSSSSGSSDDEKDEEESS
Sbjct: 121 MSKVSLVIDGGSTGNIESDSREDDDDSDVESEGTSSASTSSDSSSSSGSSDDEKDEEESS 180

Query: 181 SSSSSGDSSCDDDVETEENSVKADVHTEIGELEEGEISDADNEDKEASADDMVAWDGDGE 240
           SSSSSGDSSCDDDVETEENSVKADVHTEIGELEEGEISDADNEDKEASADDMVAWDGDGE
Sbjct: 181 SSSSSGDSSCDDDVETEENSVKADVHTEIGELEEGEISDADNEDKEASADDMVAWDGDGE 240

Query: 241 ELDEEDEAGPEGGPISSKNELKVLPPVPQVHATLQPHHQMVPVGVVLSIIGSQVIVEGVE 300
           ELDEE+EAGPEGGPISSKNELKVLPPVPQVHATLQPHHQMVPVGVVLSIIGSQVIVEGVE
Sbjct: 241 ELDEEEEAGPEGGPISSKNELKVLPPVPQVHATLQPHHQMVPVGVVLSIIGSQVIVEGVE 300

Query: 301 KHNPLNEGSILWLTVARSPLGLVDEIFGPVKNPYYSVRYNSESEVPTGISSGTHVSFVLE 360
           KHNPLNEGSILWLTVARSPLGLVDEIFGPVKNPYYSVRYNSESEVPTGISSGTHVSFVLE
Sbjct: 301 KHNPLNEGSILWLTVARSPLGLVDEIFGPVKNPYYSVRYNSESEVPTGISSGTHVSFVLE 360

Query: 361 FADYVLNNKDLYKKGYDASGANDEEVSDNEFSDDEKELEFKKMQKLAKRGMNDNQQTNEN 420
           FADYVLNNKDLYKKGYDASGANDEEVSDNEFSDDEKELEFKKMQKLAKRGMNDNQQ NEN
Sbjct: 361 FADYVLNNKDLYKKGYDASGANDEEVSDNEFSDDEKELEFKKMQKLAKRGMNDNQQINEN 420

Query: 421 RNNARKKKNNAKARKFGQRTFETPQEHDKSRNYGQSMPQQATVPEGSKFDQPAPQQVKMD 480
           RNNARKKKNNAKARKFGQRTFETPQEHDKSRNYGQ++PQQATVPEGSKFDQPAPQQVKMD
Sbjct: 421 RNNARKKKNNAKARKFGQRTFETPQEHDKSRNYGQAIPQQATVPEGSKFDQPAPQQVKMD 480

Query: 481 MAQSFSNQNQHTGPPLAPFVYHGGYPNPSASEQRFINGPGVMPSFPPAFNPCFSPAMNGI 540
           MA SFSNQNQHTGPPLAPFVYHGGYPNPSASEQRFINGPGVMPSFPPAFNPCF PAMNGI
Sbjct: 481 MAHSFSNQNQHTGPPLAPFVYHGGYPNPSASEQRFINGPGVMPSFPPAFNPCFPPAMNGI 540

Query: 541 RPAEMPFQFQQQQQQQQNPLFPNGLPMNGMPWLLQNPVQQVPQPQMPMMNTFAGAPYPPG 600
           RPAEMPFQF QQQQQQQNPLFPNGLPM GMPWLLQNPVQQVPQPQMPMMNTFAGAPYPPG
Sbjct: 541 RPAEMPFQF-QQQQQQQNPLFPNGLPMTGMPWLLQNPVQQVPQPQMPMMNTFAGAPYPPG 600

Query: 601 FVGTSSALPNPLTAVGAQGIHSGGVQFGQNQNMHPPTQQFNRSNPHPPVPFQGNVAPEQF 660
           FVGTSSALPNPLTAVGAQGIHSGGVQFGQNQNMHPPTQQFNR NPHPPVPFQGNVAPEQF
Sbjct: 601 FVGTSSALPNPLTAVGAQGIHSGGVQFGQNQNMHPPTQQFNRPNPHPPVPFQGNVAPEQF 660

Query: 661 NQGSSSNRGRKSYGRGGPHFR 682
           NQGSSSNRGRKSYGRGGPHFR
Sbjct: 661 NQGSSSNRGRKSYGRGGPHFR 678

[Close]

BLAST of Carg13570 vs. NCBI nr
Match: XP_022970813.1 (H/ACA ribonucleoprotein complex non-core subunit NAF1 [Cucurbita maxima])

HSP 1 Score: 1243.0 bits (3215), Expect = 0.0e+00
Identity = 657/682 (96.33%), Postives = 665/682 (97.51%), Query Frame = 0


Query: 1   MVELSSNSTTASAPAPDGLLHASSKLKNSEPLPLDSFDSKPVDYSFADSFLDYDSLNDWI 60
           MVELSSNSTTAS  APDGLLHASSKLKNSEPLPLDSFDSKPVDYSFADSFLDYDSLNDWI
Sbjct: 1   MVELSSNSTTAS--APDGLLHASSKLKNSEPLPLDSFDSKPVDYSFADSFLDYDSLNDWI 60

Query: 61  DEFTSPVMADAQAILPEAESHVNQLVEKSVPIVGEIQPIAQAEGEACGKSTDLNCIIEEG 120
           DEFTSPVMADAQ ILPEAESHVNQ VEKSVPIVGEIQPIAQA GEAC KSTDLNCIIEEG
Sbjct: 61  DEFTSPVMADAQTILPEAESHVNQPVEKSVPIVGEIQPIAQAGGEACAKSTDLNCIIEEG 120

Query: 121 MSKVSLVIDGGSTGNIESDSREDDDESDVESEGTSSASTSSDSSSSSGSSDDEK-DEEES 180
           MSKVSLVIDGGSTGNIESDSREDDDESD ESEGTSSASTSSDSSSSSGSSDD K D+EES
Sbjct: 121 MSKVSLVIDGGSTGNIESDSREDDDESDAESEGTSSASTSSDSSSSSGSSDDGKDDDEES 180

Query: 181 SSSSSSGDSSCDDDVETEENSVKADVHTEIGELEEGEISDADNEDKEASADDMVAWDGDG 240
           SSSSSSGDSSC DDVET+ENSVKADVHTEIGELEEGEISDADNEDKEASADDMVAWDGDG
Sbjct: 181 SSSSSSGDSSCHDDVETKENSVKADVHTEIGELEEGEISDADNEDKEASADDMVAWDGDG 240

Query: 241 EELDEEDEAGPEGGPISSKNELKVLPPVPQVHATLQPHHQMVPVGVVLSIIGSQVIVEGV 300
           EELDEE+EAGPEGGPISSKNELKVLPPVPQVHATLQPHHQMVPVGVVLSIIGSQVIVEGV
Sbjct: 241 EELDEEEEAGPEGGPISSKNELKVLPPVPQVHATLQPHHQMVPVGVVLSIIGSQVIVEGV 300

Query: 301 EKHNPLNEGSILWLTVARSPLGLVDEIFGPVKNPYYSVRYNSESEVPTGISSGTHVSFVL 360
           EKHNPLNEGSILWLTVARSPLGLVDEIFGPVKNPYYSVRYNSESEVPTGISSGTHVSFVL
Sbjct: 301 EKHNPLNEGSILWLTVARSPLGLVDEIFGPVKNPYYSVRYNSESEVPTGISSGTHVSFVL 360

Query: 361 EFADYVLNNKDLYKKGYDASGANDEEVSDNEFSDDEKELEFKKMQKLAKRGMNDNQQTNE 420
           EFADYVLNNKDLYKKGYDASGANDEEVSDNEFSDDEKELEFKKMQKLAKRGMNDNQQ NE
Sbjct: 361 EFADYVLNNKDLYKKGYDASGANDEEVSDNEFSDDEKELEFKKMQKLAKRGMNDNQQINE 420

Query: 421 NRNNARKKKNNAKARKFGQRTFETPQEHDKSRNYGQSMPQQATVPEGSKFDQPAPQQVKM 480
           NRNNARKKKNNAKARKFGQRTFETPQEHDKSRNYGQ++PQQATVPEGSKFD  APQQVKM
Sbjct: 421 NRNNARKKKNNAKARKFGQRTFETPQEHDKSRNYGQAIPQQATVPEGSKFDHSAPQQVKM 480

Query: 481 DMAQSFSNQNQHTGPPLAPFVYHGGYPNPSASEQRFINGPGVMPSFPPAFNPCFSPAMNG 540
           DMAQSFSNQNQHTGPPLAPFVYHGGYPNPSASEQRFINGPGVMPSFPPA+NPCF PAMNG
Sbjct: 481 DMAQSFSNQNQHTGPPLAPFVYHGGYPNPSASEQRFINGPGVMPSFPPAYNPCFPPAMNG 540

Query: 541 IRPAEMPFQFQQQQQQQQNPLFPNGLPMNGMPWLLQNPVQQVPQPQMPMMNTFAGAPYPP 600
           IRPAEMPFQFQQQQQQQQN LFPNGLPMNGMPWLLQNPVQQVPQPQMPMMNTFAGAPYPP
Sbjct: 541 IRPAEMPFQFQQQQQQQQNLLFPNGLPMNGMPWLLQNPVQQVPQPQMPMMNTFAGAPYPP 600

Query: 601 GFVGTSSALPNPLTAVGAQGIHSGGVQFGQNQNMHPPTQQFNRSNPHPPVPFQGNVAPEQ 660
           GFVGTSS LPNPLTAVGAQGIHSGGVQFGQNQNMHPPTQQF+RSNPHPPVPFQG+VAPEQ
Sbjct: 601 GFVGTSSTLPNPLTAVGAQGIHSGGVQFGQNQNMHPPTQQFSRSNPHPPVPFQGSVAPEQ 660

Query: 661 FNQGSSSNRGRKSYGRGGPHFR 682
           FNQGSSSNRGRK YGRGGPHFR
Sbjct: 661 FNQGSSSNRGRKLYGRGGPHFR 680

[Close]

BLAST of Carg13570 vs. ExPASy Swiss-Prot
Match: P53919 (H/ACA ribonucleoprotein complex non-core subunit NAF1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=NAF1 PE=1 SV=1)

HSP 1 Score: 77.0 bits (188), Expect = 9.0e-13
Identity = 144/507 (28.40%), Postives = 214/507 (42.21%), Query Frame = 0


Query: 112 DLNCIIEEGMSKVSLVIDGGSTGNIESDSREDDDESDVESEGTSSASTSSDSSSSSGSSD 171
           DLN  + +    + L+ DGG      ++ + D+  +D E   T   S SS+S S SGS  
Sbjct: 16  DLNVELPKDDVDLGLLGDGG------NERKTDEPVADAE-RSTGLGSGSSESESDSGS-- 75

Query: 172 DEKDEEESSSSSSSGDSSCDDDVETEENSVKADVHTEIGELEEGEISDADNEDKEASADD 231
              D +  S SS S D S D DVE E               +EG                
Sbjct: 76  ---DSDSDSGSSGSEDDSADQDVEGE---------------DEG---------------- 135

Query: 232 MVAWDGDGEELDEEDEAGPEGGPISSKNEL--KVLPPVPQVHATLQPHHQMVPVGVVLSI 291
                GD  E ++EDE     GPI SKNE+  + +P +P+ +  +     + P+GV+ S 
Sbjct: 136 -----GDAIENEDEDEDPSPSGPILSKNEILEETVPELPEDY-EISEKTIITPIGVLKSA 195

Query: 292 IGSQVIVEGV--EKHNPLNEGSILWLTVARSPLGLVDEIFGPVKNPYYSVRYNSESE--- 351
             + +I+      +   L EGSI  L   R+ +G++ E+FGP++NP+Y ++     +   
Sbjct: 196 FENNIIIHATMSGEKRVLKEGSIFCLE-DRTLIGMLTEVFGPLQNPFYRIKLPDSKKNLF 255

Query: 352 VPTGISSGTHVSFVLEFADYVLNNKDLYKKGYDASGANDEEV--SDNEFSDDEKELEFKK 411
               +  G     V   A ++   +    KG DAS   DEE+   + EFSDDEKE  FKK
Sbjct: 256 DELKVRLGEKAFIVTPDAHWIDTFELKRNKGTDASNGYDEELPEEEQEFSDDEKEALFKK 315

Query: 412 MQKLAK-RGMNDNQQ-TNENRNNARKKKNNAKARKFGQ------RTFETPQEHD-KSRNY 471
           M+K  + R   DN++  N++ N   K+    KA    +       +   P +H  KSRN 
Sbjct: 316 MKKQQRQRKKRDNRKLANDSDNVKVKRARQPKANSLPKLVPPLGMSSNAPMQHGYKSRNA 375

Query: 472 GQSMPQQATVPEGSKFDQPAPQQVKMDMAQSFSNQN-----QHTG---PPLAPFVY--HG 531
            +++ ++++         P P  +     Q FS  N     Q  G   PP +PF    + 
Sbjct: 376 RENIKRESSATSNRNGSSPVP--ITQHHQQQFSANNYPFPQQPNGMPYPPYSPFPQPTNF 435

Query: 532 GYPNPSASEQRFINGPGVMP--SFPPAFNPCFSPAMNGIRPAEMPFQFQQQQQQQQNPLF 588
            YP P   +         +P  S PPA+N    P      P             Q  P  
Sbjct: 436 QYPPPPFGQATPAQFSNTVPYGSLPPAYNNMSPPTQQSFMP-----------MTQSQPPL 455

[Close]

BLAST of Carg13570 vs. ExPASy Swiss-Prot
Match: A6ZRW0 (H/ACA ribonucleoprotein complex non-core subunit NAF1 OS=Saccharomyces cerevisiae (strain YJM789) OX=307796 GN=NAF1 PE=3 SV=1)

HSP 1 Score: 75.9 bits (185), Expect = 2.0e-12
Identity = 144/507 (28.40%), Postives = 214/507 (42.21%), Query Frame = 0


Query: 112 DLNCIIEEGMSKVSLVIDGGSTGNIESDSREDDDESDVESEGTSSASTSSDSSSSSGSSD 171
           DLN  + +    + L+ DGG      ++ + D+  +D E   T   S SS+S S SGS  
Sbjct: 16  DLNVELPKDDVDLGLLGDGG------NERKTDEPAADAE-RSTGLGSGSSESESDSGS-- 75

Query: 172 DEKDEEESSSSSSSGDSSCDDDVETEENSVKADVHTEIGELEEGEISDADNEDKEASADD 231
              D +  S SS S D S D DVE E               +EG                
Sbjct: 76  ---DSDSDSGSSGSEDDSADQDVEGE---------------DEG---------------- 135

Query: 232 MVAWDGDGEELDEEDEAGPEGGPISSKNEL--KVLPPVPQVHATLQPHHQMVPVGVVLSI 291
                GD  E ++EDE     GPI SKNE+  + +P +P+ +  +     + P+GV+ S 
Sbjct: 136 -----GDAIENEDEDEDPSPSGPILSKNEILEETVPELPEDY-EISEKTIITPIGVLKSA 195

Query: 292 IGSQVIVEGV--EKHNPLNEGSILWLTVARSPLGLVDEIFGPVKNPYYSVRYNSESE--- 351
             + +I+      +   L EGSI  L   R+ +G++ E+FGP++NP+Y ++     +   
Sbjct: 196 FENNIIIHATMSGEKRVLKEGSIFCLE-DRTLIGMLTEVFGPLQNPFYRIKLPDSKKNLF 255

Query: 352 VPTGISSGTHVSFVLEFADYVLNNKDLYKKGYDASGANDEEV--SDNEFSDDEKELEFKK 411
               +  G     V   A ++   +    KG DAS   DEE+   + EFSDDEKE  FKK
Sbjct: 256 DELKVRLGEKAFIVTPDAHWIDTFELKRNKGTDASNGYDEELPEEEQEFSDDEKEALFKK 315

Query: 412 MQK-LAKRGMNDNQQ-TNENRNNARKKKNNAKARKFGQ------RTFETPQEHD-KSRNY 471
           M+K   +R   DN++  N++ N   K+    KA    +       +   P +H  KSRN 
Sbjct: 316 MKKQQQQRKKRDNRKLANDSDNVKVKRARQPKANSLPKLVPPLGMSSNAPMQHGYKSRNA 375

Query: 472 GQSMPQQATVPEGSKFDQPAPQQVKMDMAQSFSNQN-----QHTG---PPLAPFVY--HG 531
            +++ ++++         P P  +     Q FS  N     Q  G   PP +PF    + 
Sbjct: 376 RENIKRESSATSNRNGSSPVP--ITQLHQQQFSANNYPFPQQPNGMPYPPYSPFPQPTNF 435

Query: 532 GYPNPSASEQRFINGPGVMP--SFPPAFNPCFSPAMNGIRPAEMPFQFQQQQQQQQNPLF 588
            YP P   +         +P  S PPA+N    P      P             Q  P  
Sbjct: 436 QYPPPPFGQATPAQFSNTVPYGSLPPAYNNMSPPTQQSFMP-----------MAQSQPPL 455

[Close]

BLAST of Carg13570 vs. ExPASy Swiss-Prot
Match: Q52KK4 (H/ACA ribonucleoprotein complex non-core subunit NAF1 OS=Rattus norvegicus OX=10116 GN=Naf1 PE=1 SV=1)

HSP 1 Score: 58.5 bits (140), Expect = 3.3e-07
Identity = 113/403 (28.04%), Postives = 170/403 (42.18%), Query Frame = 0


Query: 162 DSSSSSGSSDDEKDEEESSSSSSSGDSSCDDDVETEENSVKADVHTEIGELEEGEISDAD 221
           DS SS   SD E D + SSSSSSS  SS                                
Sbjct: 81  DSDSSDSDSDSETDSDSSSSSSSSSSSS-------------------------------- 140

Query: 222 NEDKEASADDMVAWDGDGEELDEEDEAGPEGGPISSKNELKV--LPPVPQVHATLQPHHQ 281
                +S   +     DGEE D + E   +  P+ +K+EL +  LP V ++  TL     
Sbjct: 141 -----SSCGSLPPVLSDGEE-DVQVEKENKNFPLKTKDELLLNELPSVEELTVTLPEDIA 200

Query: 282 MVPVGVVLSIIGSQVIVEGVEKHNPLNEGSILWLTVARSPLGLVDEIFGPVKNPYYSVRY 341
           + P+G V SII   VI+E +    P+NE ++++ +  R   G + EIFGPV +P+Y +R+
Sbjct: 201 LKPLGKVSSIIEQLVIIESMTNIPPVNEDTVIFKS-DRQAAGKIFEIFGPVAHPFYVLRF 260

Query: 342 NSESEVPT-GISSGTHVSF---VLEFADYVLNNKDLYKKGYDASGANDEEVSDN--EFSD 401
           NS   + + GI     + F   + +F  Y+   K    +G DAS  ND+E      +FSD
Sbjct: 261 NSSEHIESKGIKIKDTMYFAPSMKDFTQYIFTEKLKQDRGSDASWKNDQEPPPEALDFSD 320

Query: 402 DEKELEFKKMQKLAKRGMND-NQQTNENRNNARKKKNNAKARKFGQRTFETPQEHDK--- 461
           DEKE E K+ +K   +G      + NE+  +  +   N  A         +  EH K   
Sbjct: 321 DEKEKEAKQRKKSQIQGRKKLKSELNESGEDFGEVHQNWNA--------NSSSEHSKGYH 380

Query: 462 SRNYGQSMPQQATVPEGSKFDQPAPQQV----KMDMAQSFSNQNQHTGPPLAPFVYHGGY 521
           +R + +  P +     GS   +P PQQ      M   +S     Q    P+ P   H  +
Sbjct: 381 NREFTRGFP-RGRYSRGS-HGRPPPQQYYNSDPMASQESLGFPPQRQDNPVMP---HYPF 429

Query: 522 PNPSASEQRFINGPGVMPSFPPAFNPCF-SPAMNGIRPAEMPF 548
           P P      F   P   P  PP  +  + +P+M       +P+
Sbjct: 441 PPPMFDMHNFPLPPPPPP--PPTVSMGWAAPSMTSHPVLNLPY 429

[Close]

BLAST of Carg13570 vs. ExPASy Swiss-Prot
Match: Q3UMQ8 (H/ACA ribonucleoprotein complex non-core subunit NAF1 OS=Mus musculus OX=10090 GN=Naf1 PE=1 SV=2)

HSP 1 Score: 54.7 bits (130), Expect = 4.8e-06
Identity = 106/387 (27.39%), Postives = 166/387 (42.89%), Query Frame = 0


Query: 160 SSDSSSSSGSSDDEKDEEESSSSSSSGDSSCDDDVETEENSVKADVHTEIGELEEGEISD 219
           +SDSS S   S+ + D   SSSSSSS  SSC                             
Sbjct: 109 ASDSSDSDSDSETDSDSSSSSSSSSSSSSSC----------------------------- 168

Query: 220 ADNEDKEASADDMVAWDGDGE-ELDEEDEAGPEGGPISSKNELKV--LPPVPQVHATLQP 279
                    +   V  DGD + +L++E+    +  P+ +K+EL +  LP V ++   L  
Sbjct: 169 --------VSFPPVLSDGDEDFQLEKEN----KNFPLKTKDELLLNELPSVEELTVILPE 228

Query: 280 HHQMVPVGVVLSIIGSQVIVEGVEKHNPLNEGSILWLTVARSPLGLVDEIFGPVKNPYYS 339
              + P+G V SII   VI+E V    P+NE ++++ +  R   G + EIFGPV +P+Y 
Sbjct: 229 DIALKPLGKVSSIIEQLVIIESVTNIPPVNEDTVIFKS-DRQAAGKIFEIFGPVAHPFYV 288

Query: 340 VRYNSESEVPT-GISSGTHVSF---VLEFADYVLNNKDLYKKGYDASGANDEEVSDN--E 399
           +R+NS   + + GI     + F   + +F  Y+   K    +G DAS  ND+E      +
Sbjct: 289 LRFNSSDHIESKGIKINDTMYFAPSMKDFTQYIFTEKLKQDRGSDASWKNDQEPPPEVLD 348

Query: 400 FSDDEKELEFKKMQKLAKRG-------MNDN-QQTNENRNNARKKKNNAKARKFGQRTFE 459
           FSDDEKE E K+ +K   +G       +N++ +   E   N     ++  ++ +  R F 
Sbjct: 349 FSDDEKEKEAKQRKKSQIQGRKKLKSELNESGEDFGEVHENWNAYSSSEHSKGYHHREFS 408

Query: 460 T--PQEHDKSRNYGQSMPQQATVPEGSKFDQPAPQQVKMDMAQSFSNQNQHTGPPLAPFV 519
               +     R++G+  PQQ         D  A Q+     +  F+ Q Q       P +
Sbjct: 409 RGFARGRYSRRSHGRPPPQQY-----YNSDHMASQE-----SLGFTPQRQDN-----PVM 438

Query: 520 YHGGYPNPSASEQRFINGPGVMPSFPP 528
            H  +P P      F   P   P  PP
Sbjct: 469 PHYPFPPPMFDMHNFPLPPPPPPPPPP 438

[Close]

BLAST of Carg13570 vs. ExPASy Swiss-Prot
Match: Q96HR8 (H/ACA ribonucleoprotein complex non-core subunit NAF1 OS=Homo sapiens OX=9606 GN=NAF1 PE=1 SV=2)

HSP 1 Score: 49.7 bits (117), Expect = 1.5e-04
Identity = 124/478 (25.94%), Postives = 195/478 (40.79%), Query Frame = 0


Query: 89  SVPIVGEIQPIAQAEGEA-CGKSTDLNCIIEEGMSKVSLVIDGGSTGNIESDSREDDDES 148
           S P+ G   P+   EG    G++ ++    E+ +  V   +  G+         E     
Sbjct: 34  SAPVPGTQPPLQSFEGSPDAGQTVEVKPAGEQPLQPVLNAVAAGTPAPQPQPPAESPACG 93

Query: 149 D-VESEGTSSASTSSDSSSSSGSSDDEKDEEESSSSSSSGDSSCDDDVETEENSVKADVH 208
           D V S G +  + + DS  +S S  D   E +S SSSSS  SS                 
Sbjct: 94  DCVTSPGAAEPARAPDSLETSDSDSDSDSETDSDSSSSSSSSS----------------- 153

Query: 209 TEIGELEEGEISDADNEDKEASADDMVAWDGDGEELDEEDEAGPEGGPISSKNELKV--L 268
                      S + +      +   V  DGD    D + E   +  P+ +K+EL +  L
Sbjct: 154 -----------SSSSSSSSSCISLPPVLSDGDD---DLQIEKENKNFPLKTKDELLLNEL 213

Query: 269 PPVPQVHATLQPHHQMVPVGVVLSIIGSQVIVEGVEKHNPLNEGSILWLTVARSPLGLVD 328
           P V ++   L    ++ P+G+V SII   VI+E +    P+NE ++++ +  R   G + 
Sbjct: 214 PSVEELTIILPEDIELKPLGMVSSIIEQLVIIESMTNLPPVNEETVIFKS-DRQAAGKIF 273

Query: 329 EIFGPVKNPYYSVRYNSESEVPT-GISSGTHVSF---VLEFADYVLNNKDLYKKGYDASG 388
           EIFGPV +P+Y +R+NS   + + GI     + F   + +F  Y+   K    KG DAS 
Sbjct: 274 EIFGPVAHPFYVLRFNSSDHIESKGIKIKETMYFAPSMKDFTQYIFTEKLKQDKGSDASW 333

Query: 389 ANDEEVSDN--EFSDDEKELEFKKMQKLAKRGM-----------NDNQQTNENRNNARKK 448
            ND+E      +FSDDEKE E K+ +K   +G             D  + ++N N     
Sbjct: 334 KNDQEPPPEALDFSDDEKEKEAKQRKKSQIQGRKKLKSEFNEPGEDFTEVHQNWNAHSSA 393

Query: 449 KNNAKARKFGQRTFETPQEHDKSRN----YGQSMPQ------QATVPEGSKFDQPAPQQV 508
             +AK    G R  E  +   ++R     +G+  PQ           E S F  P+ +Q 
Sbjct: 394 SEHAK----GYRNREFTRGFSRARYPRSCHGRPPPQHFYNSEHMVSQETSGF--PSQRQN 453

Query: 509 KMDMAQ--------SFSNQNQHTGPPLAPFVYHGGYPNPSASEQRFINGPGVMPSFPP 528
              M Q           N      PP  P   + G+  P+ +    +N P  +P  PP
Sbjct: 454 NPIMPQYPFPLPVFDMHNFPLRPPPPPPPPPVNMGWATPNMAAHPLLNLPYSLPPPPP 473

[Close]

BLAST of Carg13570 vs. ExPASy TrEMBL
Match: A0A6J1G6M0 (H/ACA ribonucleoprotein complex non-core subunit NAF1 OS=Cucurbita moschata OX=3662 GN=LOC111451307 PE=3 SV=1)

HSP 1 Score: 1281.9 bits (3316), Expect = 0.0e+00
Identity = 673/681 (98.83%), Postives = 675/681 (99.12%), Query Frame = 0


Query: 1   MVELSSNSTTASAPAPDGLLHASSKLKNSEPLPLDSFDSKPVDYSFADSFLDYDSLNDWI 60
           MVELSSNSTTASAPAPDGLLHASSKLKNSEPLPLDSFDSKPVDYSFADSFLDYDSLNDWI
Sbjct: 1   MVELSSNSTTASAPAPDGLLHASSKLKNSEPLPLDSFDSKPVDYSFADSFLDYDSLNDWI 60

Query: 61  DEFTSPVMADAQAILPEAESHVNQLVEKSVPIVGEIQPIAQAEGEACGKSTDLNCIIEEG 120
           DEFTSPVMADAQ+ILPEAESHVNQ VEKSVPIVGEIQP AQAEGEACGKSTDLNCIIEEG
Sbjct: 61  DEFTSPVMADAQSILPEAESHVNQPVEKSVPIVGEIQPTAQAEGEACGKSTDLNCIIEEG 120

Query: 121 MSKVSLVIDGGSTGNIESDSREDDDESDVESEGTSSASTSSDSSSSSGSSDDEKDEEESS 180
           MSKVSLVIDGGSTGNIESDSREDDDESDVESEGTSSASTSSDSSSSSGSSDDEKDEEESS
Sbjct: 121 MSKVSLVIDGGSTGNIESDSREDDDESDVESEGTSSASTSSDSSSSSGSSDDEKDEEESS 180

Query: 181 SSSSSGDSSCDDDVETEENSVKADVHTEIGELEEGEISDADNEDKEASADDMVAWDGDGE 240
           SSSSSGDSSCDDDVETEENSVKADVHTEIGELEEGEISDADNEDKEASADDMVAWDGDGE
Sbjct: 181 SSSSSGDSSCDDDVETEENSVKADVHTEIGELEEGEISDADNEDKEASADDMVAWDGDGE 240

Query: 241 ELDEEDEAGPEGGPISSKNELKVLPPVPQVHATLQPHHQMVPVGVVLSIIGSQVIVEGVE 300
           ELDEEDEAGPEGGPISSKNELKVLPPVPQVHATLQPHHQMVPVGVVLSIIGSQVIVEGVE
Sbjct: 241 ELDEEDEAGPEGGPISSKNELKVLPPVPQVHATLQPHHQMVPVGVVLSIIGSQVIVEGVE 300

Query: 301 KHNPLNEGSILWLTVARSPLGLVDEIFGPVKNPYYSVRYNSESEVPTGISSGTHVSFVLE 360
           KHNPLNEGSILWLTVARSPLGLVDEIFGPVKNPYYSVRYNSESEVPTGISSGTHVSFVLE
Sbjct: 301 KHNPLNEGSILWLTVARSPLGLVDEIFGPVKNPYYSVRYNSESEVPTGISSGTHVSFVLE 360

Query: 361 FADYVLNNKDLYKKGYDASGANDEEVSDNEFSDDEKELEFKKMQKLAKRGMNDNQQTNEN 420
           FADYVLNNKDLYKKGYDASGANDEEVSDNEFSDDEKELEFKKMQKLAKRGMNDNQQ NEN
Sbjct: 361 FADYVLNNKDLYKKGYDASGANDEEVSDNEFSDDEKELEFKKMQKLAKRGMNDNQQINEN 420

Query: 421 RNNARKKKNNAKARKFGQRTFETPQEHDKSRNYGQSMPQQATVPEGSKFDQPAPQQVKMD 480
           RNNARKKKNNAKARKFGQRTFETPQEHDKSRNYGQSMPQQATVPEGSKFDQPAPQQVKMD
Sbjct: 421 RNNARKKKNNAKARKFGQRTFETPQEHDKSRNYGQSMPQQATVPEGSKFDQPAPQQVKMD 480

Query: 481 MAQSFSNQNQHTGPPLAPFVYHGGYPNPSASEQRFINGPGVMPSFPPAFNPCFSPAMNGI 540
           MAQSFSNQNQHTGPPLAPFVYHGGYPNPSASEQRFINGPGVMPSFPPA+NPCF PAMNGI
Sbjct: 481 MAQSFSNQNQHTGPPLAPFVYHGGYPNPSASEQRFINGPGVMPSFPPAYNPCFPPAMNGI 540

Query: 541 RPAEMPFQFQQQQQQQQNPLFPNGLPMNGMPWLLQNPVQQVPQPQMPMMNTFAGAPYPPG 600
           RPAEMPFQF  QQQQQQNPLFPNGLPMNGMPWLLQNPVQQVPQPQMPMMNTFAGAPYPPG
Sbjct: 541 RPAEMPFQF--QQQQQQNPLFPNGLPMNGMPWLLQNPVQQVPQPQMPMMNTFAGAPYPPG 600

Query: 601 FVGTSSALPNPLTAVGAQGIHSGGVQFGQNQNMHPPTQQFNRSNPHPPVPFQGNVAPEQF 660
           FVGTSSALPNPLTAVGAQGIHSGGVQFGQNQNMHPPTQQFNRSNPHPPVPFQGNVAPEQF
Sbjct: 601 FVGTSSALPNPLTAVGAQGIHSGGVQFGQNQNMHPPTQQFNRSNPHPPVPFQGNVAPEQF 660

Query: 661 NQGSSSNRGRKSYGRGGPHFR 682
           NQGSSSNRGRKSYGRGGPHFR
Sbjct: 661 NQGSSSNRGRKSYGRGGPHFR 679

[Close]

BLAST of Carg13570 vs. ExPASy TrEMBL
Match: A0A6J1I505 (H/ACA ribonucleoprotein complex non-core subunit NAF1 OS=Cucurbita maxima OX=3661 GN=LOC111469679 PE=3 SV=1)

HSP 1 Score: 1243.0 bits (3215), Expect = 0.0e+00
Identity = 657/682 (96.33%), Postives = 665/682 (97.51%), Query Frame = 0


Query: 1   MVELSSNSTTASAPAPDGLLHASSKLKNSEPLPLDSFDSKPVDYSFADSFLDYDSLNDWI 60
           MVELSSNSTTAS  APDGLLHASSKLKNSEPLPLDSFDSKPVDYSFADSFLDYDSLNDWI
Sbjct: 1   MVELSSNSTTAS--APDGLLHASSKLKNSEPLPLDSFDSKPVDYSFADSFLDYDSLNDWI 60

Query: 61  DEFTSPVMADAQAILPEAESHVNQLVEKSVPIVGEIQPIAQAEGEACGKSTDLNCIIEEG 120
           DEFTSPVMADAQ ILPEAESHVNQ VEKSVPIVGEIQPIAQA GEAC KSTDLNCIIEEG
Sbjct: 61  DEFTSPVMADAQTILPEAESHVNQPVEKSVPIVGEIQPIAQAGGEACAKSTDLNCIIEEG 120

Query: 121 MSKVSLVIDGGSTGNIESDSREDDDESDVESEGTSSASTSSDSSSSSGSSDDEK-DEEES 180
           MSKVSLVIDGGSTGNIESDSREDDDESD ESEGTSSASTSSDSSSSSGSSDD K D+EES
Sbjct: 121 MSKVSLVIDGGSTGNIESDSREDDDESDAESEGTSSASTSSDSSSSSGSSDDGKDDDEES 180

Query: 181 SSSSSSGDSSCDDDVETEENSVKADVHTEIGELEEGEISDADNEDKEASADDMVAWDGDG 240
           SSSSSSGDSSC DDVET+ENSVKADVHTEIGELEEGEISDADNEDKEASADDMVAWDGDG
Sbjct: 181 SSSSSSGDSSCHDDVETKENSVKADVHTEIGELEEGEISDADNEDKEASADDMVAWDGDG 240

Query: 241 EELDEEDEAGPEGGPISSKNELKVLPPVPQVHATLQPHHQMVPVGVVLSIIGSQVIVEGV 300
           EELDEE+EAGPEGGPISSKNELKVLPPVPQVHATLQPHHQMVPVGVVLSIIGSQVIVEGV
Sbjct: 241 EELDEEEEAGPEGGPISSKNELKVLPPVPQVHATLQPHHQMVPVGVVLSIIGSQVIVEGV 300

Query: 301 EKHNPLNEGSILWLTVARSPLGLVDEIFGPVKNPYYSVRYNSESEVPTGISSGTHVSFVL 360
           EKHNPLNEGSILWLTVARSPLGLVDEIFGPVKNPYYSVRYNSESEVPTGISSGTHVSFVL
Sbjct: 301 EKHNPLNEGSILWLTVARSPLGLVDEIFGPVKNPYYSVRYNSESEVPTGISSGTHVSFVL 360

Query: 361 EFADYVLNNKDLYKKGYDASGANDEEVSDNEFSDDEKELEFKKMQKLAKRGMNDNQQTNE 420
           EFADYVLNNKDLYKKGYDASGANDEEVSDNEFSDDEKELEFKKMQKLAKRGMNDNQQ NE
Sbjct: 361 EFADYVLNNKDLYKKGYDASGANDEEVSDNEFSDDEKELEFKKMQKLAKRGMNDNQQINE 420

Query: 421 NRNNARKKKNNAKARKFGQRTFETPQEHDKSRNYGQSMPQQATVPEGSKFDQPAPQQVKM 480
           NRNNARKKKNNAKARKFGQRTFETPQEHDKSRNYGQ++PQQATVPEGSKFD  APQQVKM
Sbjct: 421 NRNNARKKKNNAKARKFGQRTFETPQEHDKSRNYGQAIPQQATVPEGSKFDHSAPQQVKM 480

Query: 481 DMAQSFSNQNQHTGPPLAPFVYHGGYPNPSASEQRFINGPGVMPSFPPAFNPCFSPAMNG 540
           DMAQSFSNQNQHTGPPLAPFVYHGGYPNPSASEQRFINGPGVMPSFPPA+NPCF PAMNG
Sbjct: 481 DMAQSFSNQNQHTGPPLAPFVYHGGYPNPSASEQRFINGPGVMPSFPPAYNPCFPPAMNG 540

Query: 541 IRPAEMPFQFQQQQQQQQNPLFPNGLPMNGMPWLLQNPVQQVPQPQMPMMNTFAGAPYPP 600
           IRPAEMPFQFQQQQQQQQN LFPNGLPMNGMPWLLQNPVQQVPQPQMPMMNTFAGAPYPP
Sbjct: 541 IRPAEMPFQFQQQQQQQQNLLFPNGLPMNGMPWLLQNPVQQVPQPQMPMMNTFAGAPYPP 600

Query: 601 GFVGTSSALPNPLTAVGAQGIHSGGVQFGQNQNMHPPTQQFNRSNPHPPVPFQGNVAPEQ 660
           GFVGTSS LPNPLTAVGAQGIHSGGVQFGQNQNMHPPTQQF+RSNPHPPVPFQG+VAPEQ
Sbjct: 601 GFVGTSSTLPNPLTAVGAQGIHSGGVQFGQNQNMHPPTQQFSRSNPHPPVPFQGSVAPEQ 660

Query: 661 FNQGSSSNRGRKSYGRGGPHFR 682
           FNQGSSSNRGRK YGRGGPHFR
Sbjct: 661 FNQGSSSNRGRKLYGRGGPHFR 680

[Close]

BLAST of Carg13570 vs. ExPASy TrEMBL
Match: A0A5D3CIV9 (H/ACA ribonucleoprotein complex non-core subunit NAF1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold66G00340 PE=3 SV=1)

HSP 1 Score: 896.7 bits (2316), Expect = 5.8e-257
Identity = 509/702 (72.51%), Postives = 558/702 (79.49%), Query Frame = 0


Query: 1   MVELSSNSTTASAPAPDGLLHASSKLKNSEPLPLDSFDSKPVDYSFADSFLDYDSLNDWI 60
           MVE + NS T S  APDGLLH SSKLKNS   PLDSFDSK +DYSF DSFLDYDS NDW 
Sbjct: 1   MVEFAPNSNTTS--APDGLLHTSSKLKNSG--PLDSFDSKAIDYSFVDSFLDYDSFNDWF 60

Query: 61  DEFTSPVMADAQAILPEAESHVNQLVEKSVPIVGEIQP----------IAQAEGEACGKS 120
           DE TSP M D Q +LPE ++H++Q VEKSVP++  +Q             QA GEAC  S
Sbjct: 61  DELTSPNMVDTQKLLPEGDAHLSQSVEKSVPVIDGVQSNFVRSEDFKIEMQASGEACNNS 120

Query: 121 TDLNCIIEEGMSKVSLVIDGGSTGNIESDSREDDDESDVESEGTSSASTSSDSSSSSGSS 180
           TDLN IIEEGMSKVSLV+DGG T  +E +S  DD E+DVESEGTSS STSS SSSS GSS
Sbjct: 121 TDLNSIIEEGMSKVSLVLDGGCTSKVELESEADDGENDVESEGTSSISTSS-SSSSGGSS 180

Query: 181 DDEKDEEESSSSSSSGDSSCDDDVETEENSVKADVHTEIGELEEGEISDADNEDKEASAD 240
           D+E DEEE +SSSS   SS D D E EE  V+A+   EIGELEEGEI DAD ED+EASAD
Sbjct: 181 DNEVDEEEENSSSS---SSSDYDDEEEEYIVEAEGKREIGELEEGEIRDADGEDEEASAD 240

Query: 241 DMVAWDGDGEELD--------EEDEAGPEGGPISSKNELKVLPPVPQVHATLQPHHQMVP 300
           DMVAWD DGE+LD        EE+EA  EGGPI+SKNELKVLPPVPQVHATLQPHHQM+P
Sbjct: 241 DMVAWDNDGEDLDGDDEDLDGEEEEARAEGGPITSKNELKVLPPVPQVHATLQPHHQMLP 300

Query: 301 VGVVLSIIGSQVIVEGVEKHNPLNEGSILWLTVARSPLGLVDEIFGPVKNPYYSVRYNSE 360
           VGVVLS++G+QVIVEGVEKHNPL+EGSILW+T ARSPLGLVDEIFGPVKNPYYSVRYNSE
Sbjct: 301 VGVVLSMLGNQVIVEGVEKHNPLSEGSILWITEARSPLGLVDEIFGPVKNPYYSVRYNSE 360

Query: 361 SEVPTGISSGTHVSFVLEFADYVLNNKDLYKKGYDASGANDEEVSDN-EFSDDEKELEFK 420
           SEVP GIS GTHVSFVLEFADYVLNNKDLYKKGYDASG NDEEVSD+ EFSDDEKELEFK
Sbjct: 361 SEVPLGISGGTHVSFVLEFADYVLNNKDLYKKGYDASGVNDEEVSDDGEFSDDEKELEFK 420

Query: 421 KMQKLAKRGMNDNQQTNENRNNARKKKNNAKARKFGQRTFETPQEHDKSRN-YGQSMPQQ 480
           +MQ+LAKR MNDNQQ N N+NN RKKKNNAKARKF Q TFE     D+S+  YGQ  P+Q
Sbjct: 421 EMQRLAKRAMNDNQQINGNKNNGRKKKNNAKARKFVQHTFENANVPDESKKFYGQRTPEQ 480

Query: 481 ATVPEGSKFDQPAPQQVKMDMAQSFSNQNQHTGPPLAPFVYHGGYPNPSASEQRFINGPG 540
           AT+ EG KFD P PQQ KMDM Q   NQNQ TGPPLAPFVY GG P+ S +EQ F+N  G
Sbjct: 481 ATIFEGRKFDHPTPQQAKMDMVQPSPNQNQQTGPPLAPFVYQGGCPDLSVAEQCFMNETG 540

Query: 541 VMPSFPPAFNPCFSPAMNGIRPAEMPFQFQQQQQQQQNPLFPNGLPMNGMPWLLQNPVQQ 600
           VM SFPP +NP F+PAMNGIRPAEMPFQF     QQQNP FPNGLPMNGMPWLLQNP QQ
Sbjct: 541 VMSSFPPTYNPYFTPAMNGIRPAEMPFQF----PQQQNPFFPNGLPMNGMPWLLQNPAQQ 600

Query: 601 VPQPQMPMMNTFAGAPYPPGFVGTSSALPNPLTAVGAQGIHSGGVQFGQNQ-NMHPPTQQ 660
           +  PQMPM+NTF GA YP GFVG+SSALPN LT VGAQGIHSGG+QFGQNQ N+ P  QQ
Sbjct: 601 M--PQMPMLNTFVGAAYPQGFVGSSSALPNSLTTVGAQGIHSGGLQFGQNQNNLQPAAQQ 660

Query: 661 FNRSNPHPPVPFQGNVAPEQFNQGSSSNRGRKSYGRGGPHFR 682
           FN  N HPP  F GN AP+QFNQ SSS +GRKS+GRGGPHFR
Sbjct: 661 FNPPNSHPPGTFSGNRAPQQFNQNSSSKQGRKSHGRGGPHFR 688

[Close]

BLAST of Carg13570 vs. ExPASy TrEMBL
Match: A0A1S4E2D7 (H/ACA ribonucleoprotein complex non-core subunit NAF1 OS=Cucumis melo OX=3656 GN=LOC103498379 PE=3 SV=1)

HSP 1 Score: 896.7 bits (2316), Expect = 5.8e-257
Identity = 509/702 (72.51%), Postives = 558/702 (79.49%), Query Frame = 0


Query: 1   MVELSSNSTTASAPAPDGLLHASSKLKNSEPLPLDSFDSKPVDYSFADSFLDYDSLNDWI 60
           MVE + NS T S  APDGLLH SSKLKNS   PLDSFDSK +DYSF DSFLDYDS NDW 
Sbjct: 1   MVEFAPNSNTTS--APDGLLHTSSKLKNSG--PLDSFDSKAIDYSFVDSFLDYDSFNDWF 60

Query: 61  DEFTSPVMADAQAILPEAESHVNQLVEKSVPIVGEIQP----------IAQAEGEACGKS 120
           DE TSP M D Q +LPE ++H++Q VEKSVP++  +Q             QA GEAC  S
Sbjct: 61  DELTSPNMVDTQKLLPEGDAHLSQSVEKSVPVIDGVQSNFVRSEDFKIEMQASGEACNNS 120

Query: 121 TDLNCIIEEGMSKVSLVIDGGSTGNIESDSREDDDESDVESEGTSSASTSSDSSSSSGSS 180
           TDLN IIEEGMSKVSLV+DGG T  +E +S  DD E+DVESEGTSS STSS SSSS GSS
Sbjct: 121 TDLNSIIEEGMSKVSLVLDGGCTSKVELESEADDGENDVESEGTSSISTSS-SSSSGGSS 180

Query: 181 DDEKDEEESSSSSSSGDSSCDDDVETEENSVKADVHTEIGELEEGEISDADNEDKEASAD 240
           D+E DEEE +SSSS   SS D D E EE  V+A+   EIGELEEGEI DAD ED+EASAD
Sbjct: 181 DNEVDEEEENSSSS---SSSDYDDEEEEYIVEAEGKREIGELEEGEIRDADGEDEEASAD 240

Query: 241 DMVAWDGDGEELD--------EEDEAGPEGGPISSKNELKVLPPVPQVHATLQPHHQMVP 300
           DMVAWD DGE+LD        EE+EA  EGGPI+SKNELKVLPPVPQVHATLQPHHQM+P
Sbjct: 241 DMVAWDNDGEDLDGDDEDLDGEEEEARAEGGPITSKNELKVLPPVPQVHATLQPHHQMLP 300

Query: 301 VGVVLSIIGSQVIVEGVEKHNPLNEGSILWLTVARSPLGLVDEIFGPVKNPYYSVRYNSE 360
           VGVVLS++G+QVIVEGVEKHNPL+EGSILW+T ARSPLGLVDEIFGPVKNPYYSVRYNSE
Sbjct: 301 VGVVLSMLGNQVIVEGVEKHNPLSEGSILWITEARSPLGLVDEIFGPVKNPYYSVRYNSE 360

Query: 361 SEVPTGISSGTHVSFVLEFADYVLNNKDLYKKGYDASGANDEEVSDN-EFSDDEKELEFK 420
           SEVP GIS GTHVSFVLEFADYVLNNKDLYKKGYDASG NDEEVSD+ EFSDDEKELEFK
Sbjct: 361 SEVPLGISGGTHVSFVLEFADYVLNNKDLYKKGYDASGVNDEEVSDDGEFSDDEKELEFK 420

Query: 421 KMQKLAKRGMNDNQQTNENRNNARKKKNNAKARKFGQRTFETPQEHDKSRN-YGQSMPQQ 480
           +MQ+LAKR MNDNQQ N N+NN RKKKNNAKARKF Q TFE     D+S+  YGQ  P+Q
Sbjct: 421 EMQRLAKRAMNDNQQINGNKNNGRKKKNNAKARKFVQHTFENANVPDESKKFYGQRTPEQ 480

Query: 481 ATVPEGSKFDQPAPQQVKMDMAQSFSNQNQHTGPPLAPFVYHGGYPNPSASEQRFINGPG 540
           AT+ EG KFD P PQQ KMDM Q   NQNQ TGPPLAPFVY GG P+ S +EQ F+N  G
Sbjct: 481 ATIFEGRKFDHPTPQQAKMDMVQPSPNQNQQTGPPLAPFVYQGGCPDLSVAEQCFMNETG 540

Query: 541 VMPSFPPAFNPCFSPAMNGIRPAEMPFQFQQQQQQQQNPLFPNGLPMNGMPWLLQNPVQQ 600
           VM SFPP +NP F+PAMNGIRPAEMPFQF     QQQNP FPNGLPMNGMPWLLQNP QQ
Sbjct: 541 VMSSFPPTYNPYFTPAMNGIRPAEMPFQF----PQQQNPFFPNGLPMNGMPWLLQNPAQQ 600

Query: 601 VPQPQMPMMNTFAGAPYPPGFVGTSSALPNPLTAVGAQGIHSGGVQFGQNQ-NMHPPTQQ 660
           +  PQMPM+NTF GA YP GFVG+SSALPN LT VGAQGIHSGG+QFGQNQ N+ P  QQ
Sbjct: 601 M--PQMPMLNTFVGAAYPQGFVGSSSALPNSLTTVGAQGIHSGGLQFGQNQNNLQPAAQQ 660

Query: 661 FNRSNPHPPVPFQGNVAPEQFNQGSSSNRGRKSYGRGGPHFR 682
           FN  N HPP  F GN AP+QFNQ SSS +GRKS+GRGGPHFR
Sbjct: 661 FNPPNSHPPGTFSGNRAPQQFNQNSSSKQGRKSHGRGGPHFR 688

[Close]

BLAST of Carg13570 vs. ExPASy TrEMBL
Match: A0A5A7TE26 (H/ACA ribonucleoprotein complex non-core subunit NAF1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold234G00720 PE=3 SV=1)

HSP 1 Score: 896.3 bits (2315), Expect = 7.6e-257
Identity = 507/702 (72.22%), Postives = 559/702 (79.63%), Query Frame = 0


Query: 1   MVELSSNSTTASAPAPDGLLHASSKLKNSEPLPLDSFDSKPVDYSFADSFLDYDSLNDWI 60
           MVE S NS  AS   PDGLLHASSKLKNSE  PLDSFDSK +DY F DSFLDYDSLNDW 
Sbjct: 1   MVEFSPNSNAAS--DPDGLLHASSKLKNSE--PLDSFDSKAIDYPFVDSFLDYDSLNDWF 60

Query: 61  DEFTSPVMADAQAILPEAESHVNQLVEKSVPIVGEIQP----------IAQAEGEACGKS 120
           +E TSP M D Q +LPE ++H++Q VEKSVP++  +Q             QA GEAC  S
Sbjct: 61  NELTSPNMVDTQTLLPEGDAHLSQSVEKSVPVIDGVQSNFVRSEDFKIEMQASGEACSNS 120

Query: 121 TDLNCIIEEGMSKVSLVIDGGSTGNIESDSREDDDESDVESEGTSSASTSSDSSSSSGSS 180
           TDLN IIEEGMSKVSLV+DGG T  +E +S  DD ESDVESEGTSS STSS SSSS GSS
Sbjct: 121 TDLNSIIEEGMSKVSLVLDGGCTSKVELESEVDDGESDVESEGTSSVSTSS-SSSSGGSS 180

Query: 181 DDEKDEEESSSSSSSGDSSCDDDVETEENSVKADVHTEIGELEEGEISDADNEDKEASAD 240
           D+E +EEE SSSSS   SS D D E EE  V+A+   EIGELEEGEI DAD+ED+EASAD
Sbjct: 181 DNEVEEEEESSSSS---SSGDYDDEEEEYIVEAEGKREIGELEEGEIRDADDEDEEASAD 240

Query: 241 DMVAWDGDGEELD--------EEDEAGPEGGPISSKNELKVLPPVPQVHATLQPHHQMVP 300
           DMVAWD DGE+LD        EE+EAG EGGPI+SKNELKVLPPVPQVHATLQPHH+M+P
Sbjct: 241 DMVAWDNDGEDLDGDDEDLDGEEEEAGAEGGPITSKNELKVLPPVPQVHATLQPHHKMLP 300

Query: 301 VGVVLSIIGSQVIVEGVEKHNPLNEGSILWLTVARSPLGLVDEIFGPVKNPYYSVRYNSE 360
           VGVVLS++G+QVIVEG+EKHNPL+EGSILW+T ARSPLGLVDEIFGPVKNPYYSVRYNSE
Sbjct: 301 VGVVLSMLGNQVIVEGIEKHNPLSEGSILWITEARSPLGLVDEIFGPVKNPYYSVRYNSE 360

Query: 361 SEVPTGISSGTHVSFVLEFADYVLNNKDLYKKGYDASGANDEEVSDN-EFSDDEKELEFK 420
           SEVP GI  GTHVSFVLEFADYVLNNKDLYKKGYDASG NDEEVSD+ EFSDDEKELEFK
Sbjct: 361 SEVPLGIRGGTHVSFVLEFADYVLNNKDLYKKGYDASGVNDEEVSDDGEFSDDEKELEFK 420

Query: 421 KMQKLAKRGMNDNQQTNENRNNARKKKNNAKARKFGQRTFETPQEHDKSRN-YGQSMPQQ 480
           K+Q+LAKR MNDNQQ N N+NN RKKKNNAKA KFGQRTFE     D+S+  YGQ  P+Q
Sbjct: 421 KLQRLAKRAMNDNQQINANKNNGRKKKNNAKAGKFGQRTFENANVPDESKKFYGQRTPEQ 480

Query: 481 ATVPEGSKFDQPAPQQVKMDMAQSFSNQNQHTGPPLAPFVYHGGYPNPSASEQRFINGPG 540
           AT+ EG  FD P PQQ KMDM Q   NQNQ TGP L PFVYHGG PNPS +E+ F+NG G
Sbjct: 481 ATIFEGRNFDYPIPQQAKMDMVQPSPNQNQQTGPHLPPFVYHGGCPNPSVAERCFMNGTG 540

Query: 541 VMPSFPPAFNPCFSPAMNGIRPAEMPFQFQQQQQQQQNPLFPNGLPMNGMPWLLQNPVQQ 600
           VM SFPPA+NP F+PAMNGIRP E+PFQF    QQQQNP FPNGLPMNGMPWLLQNP QQ
Sbjct: 541 VMSSFPPAYNPYFTPAMNGIRPPEIPFQF----QQQQNPFFPNGLPMNGMPWLLQNPAQQ 600

Query: 601 VPQPQMPMMNTFAGAPYPPGFVGTSSALPNPLTAVGAQGIHSGGVQFGQNQ-NMHPPTQQ 660
           +  PQMP++NTFAGA YP GFVG  SALPN LT VGAQGIHSGG+QFGQNQ N+ P  QQ
Sbjct: 601 M--PQMPILNTFAGAAYPQGFVGPLSALPNSLTTVGAQGIHSGGLQFGQNQNNLQPAAQQ 660

Query: 661 FNRSNPHPPVPFQGNVAPEQFNQGSSSNRGRKSYGRGGPHFR 682
           FN  N HPP    GN+AP+Q NQ SSS +GRKS GRGGPHFR
Sbjct: 661 FNPPNSHPPGTLSGNIAPQQLNQNSSSKQGRKSRGRGGPHFR 688

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BLAST of Carg13570 vs. TAIR 10
Match: AT1G03530.1 (nuclear assembly factor 1 )

HSP 1 Score: 257.3 bits (656), Expect = 3.5e-68
Identity = 255/648 (39.35%), Postives = 326/648 (50.31%), Query Frame = 0


Query: 87  EKSVPIVGEIQPIAQAEGE-ACG---------KSTD--LNCIIEEGMSKVSLVIDGGSTG 146
           E S  + GE +P+  ++   AC          K TD  L C IE G+ KVSL +D     
Sbjct: 176 ENSRSMEGETEPVVVSDASVACPTMDLDESGLKKTDEGLACSIEVGLEKVSLAVD----- 235

Query: 147 NIESDSREDDDESDVESEGTSSASTSSDSSSSSGSSDDEKDEEESSSSSSSGDSSCDDDV 206
                   DD++SD       SA + S++SSSS SS D    EE  S     D   +   
Sbjct: 236 --------DDEKSDEAKGEMDSAESESETSSSSASSSDSSSSEEEESDEDESDKEENKKE 295

Query: 207 ETEENSVKADVHTEIGELEEGEI-----------------SDADNEDKEASADDMVAWDG 266
           E  E+ V        GELEEGEI                  D D++D +   ++MVAW  
Sbjct: 296 EKFEHMVVGKEDDLAGELEEGEIENLDEENGDDDIEDEDDDDDDDDDDDDDVNEMVAWSN 355

Query: 267 DGEELDEEDEAGPE-GGPISSKNELKVLPPVPQVHATLQPHHQMVPVGVVLSIIGSQVIV 326
                DE+D+ G +   PI SKNELK LPPVP V  TL+PHH  +PVGVVLS++ +QVIV
Sbjct: 356 -----DEDDDLGLQTKEPIRSKNELKELPPVPPVDVTLEPHHATLPVGVVLSVMSAQVIV 415

Query: 327 EGVEKHNPLNEGSILWLTVARSPLGLVDEIFGPVKNPYYSVRYNSESEVPTGISSGTHVS 386
           EG+EKH+PL EGSILW+T  R+PLGLVDEIFGPVK PYY VR+NSESEVP G+  GT VS
Sbjct: 416 EGMEKHSPLTEGSILWITEKRTPLGLVDEIFGPVKCPYYIVRFNSESEVPEGVCQGTPVS 475

Query: 387 FVLEFADYVLNNKDLYKKGYDASGANDEEVSDN-EFSDDEKELEFKKMQKLAKRGMNDNQ 446
           FV +FA ++LN K+L KKGYDASG NDEE+ D  EFSDDEKE E+++MQKL KRGM  +Q
Sbjct: 476 FVADFAQHILNIKELQKKGYDASGDNDEEIPDELEFSDDEKEAEYRRMQKLEKRGMMSDQ 535

Query: 447 QTNENRNNARKKKNNAKARKFGQRTFE-TPQEHDKSRNYGQSMPQQ-------------- 506
           +T   RN  +KKKN    R     + E T  +   S +  +S PQ               
Sbjct: 536 KTGNTRN--KKKKNRDPGRPTSSYSGEWTKNQGSSSLSSNRSDPQMGGPRPQMDGFPPNN 595

Query: 507 -ATVPEGSKFD----QPAPQQVKMDMA-QSFSNQNQHTGPPLAPFVYHGG-YPNPSASEQ 566
            A  P+ ++ +     P P Q+ M +   +  NQNQ    P     ++GG  P P     
Sbjct: 596 AAWRPQSNQQNPYQLPPIPNQMGMQIPFMAMQNQNQMMFQP----QFNGGQMPMP----- 655

Query: 567 RFINGPGVMPSFPPAFNPCFSPAMNGIRPAEMPFQFQQQQQQQQNPLFPNGLPMNGMPWL 626
               GPG +  FP   +  + PAM G        QF   +  QQ PL PN L  N     
Sbjct: 656 ---GGPGGLNFFPGQASAPW-PAMVGQNCFNQ--QFGMGRGIQQQPL-PNELSFNMFSQG 715

Query: 627 LQ--NPVQQVPQPQMPMMNTFAGAPYPPGFVGTSSALPNPLTAVGAQGIHSGGVQFG-QN 677
           LQ   P  Q+ +PQ  M   F     PP F     +  NP   +  +       QF  Q 
Sbjct: 716 LQMHPPQSQMHRPQSQMNPQF---QMPPQFQPHQQSPMNPQYQMMHRPQSPANPQFQMQA 775

The following BLAST results are available for this feature:

BLAST of Carg13570 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7034929.1	0.0e+00	100.00	H/ACA ribonucleoprotein complex non-core subunit NAF1, partial [Cucurbita argyro...	[more]
KAG6604811.1	0.0e+00	99.41	H/ACA ribonucleoprotein complex non-core subunit NAF1, partial [Cucurbita argyro...	[more]
XP_022947448.1	0.0e+00	98.83	H/ACA ribonucleoprotein complex non-core subunit NAF1 [Cucurbita moschata]	[more]
XP_023533326.1	0.0e+00	97.94	H/ACA ribonucleoprotein complex non-core subunit NAF1 [Cucurbita pepo subsp. pep...	[more]
XP_022970813.1	0.0e+00	96.33	H/ACA ribonucleoprotein complex non-core subunit NAF1 [Cucurbita maxima]	[more]

BLAST of Carg13570 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P53919	9.0e-13	28.40	H/ACA ribonucleoprotein complex non-core subunit NAF1 OS=Saccharomyces cerevisia...	[more]
A6ZRW0	2.0e-12	28.40	H/ACA ribonucleoprotein complex non-core subunit NAF1 OS=Saccharomyces cerevisia...	[more]
Q52KK4	3.3e-07	28.04	H/ACA ribonucleoprotein complex non-core subunit NAF1 OS=Rattus norvegicus OX=10...	[more]
Q3UMQ8	4.8e-06	27.39	H/ACA ribonucleoprotein complex non-core subunit NAF1 OS=Mus musculus OX=10090 G...	[more]
Q96HR8	1.5e-04	25.94	H/ACA ribonucleoprotein complex non-core subunit NAF1 OS=Homo sapiens OX=9606 GN...	[more]

BLAST of Carg13570 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1G6M0	0.0e+00	98.83	H/ACA ribonucleoprotein complex non-core subunit NAF1 OS=Cucurbita moschata OX=3...	[more]
A0A6J1I505	0.0e+00	96.33	H/ACA ribonucleoprotein complex non-core subunit NAF1 OS=Cucurbita maxima OX=366...	[more]
A0A5D3CIV9	5.8e-257	72.51	H/ACA ribonucleoprotein complex non-core subunit NAF1 OS=Cucumis melo var. makuw...	[more]
A0A1S4E2D7	5.8e-257	72.51	H/ACA ribonucleoprotein complex non-core subunit NAF1 OS=Cucumis melo OX=3656 GN...	[more]
A0A5A7TE26	7.6e-257	72.22	H/ACA ribonucleoprotein complex non-core subunit NAF1 OS=Cucumis melo var. makuw...	[more]

BLAST of Carg13570 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G03530.1	3.5e-68	39.35	nuclear assembly factor 1	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 414..434
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 626..648
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 377..396
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 152..167
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 655..671
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 407..473
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 450..466
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..35
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 626..681
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 195..213
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 128..260
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 233..250
None	No IPR available	PANTHER	PTHR31633:SF1	H/ACA RIBONUCLEOPROTEIN COMPLEX NON-CORE SUBUNIT NAF1	coord: 39..680
IPR038664	H/ACA RNP complex subunit Gar1/Naf1, Cbf5-binding domain	GENE3D	2.40.10.230	Probable tRNA pseudouridine synthase domain	coord: 252..359 e-value: 1.4E-26 score: 94.7
IPR007504	H/ACA ribonucleoprotein complex, subunit Gar1/Naf1	PFAM	PF04410	Gar1	coord: 264..407 e-value: 1.0E-34 score: 119.6
IPR040309	H/ACA ribonucleoprotein complex non-core subunit Naf1	PANTHER	PTHR31633	H/ACA RIBONUCLEOPROTEIN COMPLEX NON-CORE SUBUNIT NAF1	coord: 39..680
IPR009000	Translation protein, beta-barrel domain superfamily	SUPERFAMILY	50447	Translation proteins	coord: 280..343

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg13570-RA	Carg13570-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0000493	box H/ACA snoRNP assembly
biological_process	GO:0001522	pseudouridine synthesis
biological_process	GO:0042254	ribosome biogenesis
cellular_component	GO:0005634	nucleus
cellular_component	GO:0005732	sno(s)RNA-containing ribonucleoprotein complex
molecular_function	GO:0003723	RNA binding