MELO.jh021363.1 (gene) Melon (Harukei-3) v1.41

Overview


Name	MELO.jh021363.1
Type	gene
Organism	Cucumis melo var. reticulatus cv. Harukei-3 (Melon (Harukei-3) v1.41)
Description	Unknown protein
Location	chr09: 23926114 .. 23927034 (-)
RNA-Seq Expression	MELO.jh021363.1
Synteny	MELO.jh021363.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDSstart_codonstop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

TTCATTTTTTCCTCTCTCAGGTCAATTTTCAGCGGCGCGCTCTAAATTCTCCTCCCCGATCTTCTTCATCATTCCCCCCCTCCCCAAATCGGCTGAGATCCGACGACCTTCGTCGGATTTCGCCATCACCATGAAAGGCTCCTGCACTTTGCTCGCCTCCGTCCTTGCTGCCTCTACCATGGCTTTCTCCTCTTCATCCTCCTCCACTGGAGATCGCGACCTTCCTCTTTATCCTCCCTCTCATCAGGCATTATCTCCATCTCCTTCGCTTTCCATTGTTTCTTTCTTCGATTTCGAGGAATCTCGATGAGCTAATCGGGTTTTTTTTCTTTTCTTTTCTTTTCTGGATTGTGTTTATTTTTAGGGCTTCGTTCCGGAATCTGGTGCGAACAGAGGTTGCGGCGCGGATTCTTCATCGGAGAAGGAGAAATTTGCGCCGAGGTTTGATGGATTGAGATTCATTGAGACTTTGGTAACTGCTCATAGATAATAATAAAATCCTTAAATGATGCATGTCCTCGCTCTTTCTCCTAATCCATATACCGGATCGTATTCTGTTTCATATGATTATTAGGAAGAGAAATTTTTGTTTTTACAATTTGTGAAGTGATTTTACTGACTTTCGAAAATTATGAAGGAAAGAAAAAAAGAAAAAAGAAGAATCAAGAGATTTTGTGCGAGTTCCTCTTGTTTGTAACGGAGTTTCATTGGTGTAAGAATTGAAAAATTCATGAATGAATTGAACGGGTCTGTCTGTGTGTTTGAGAATATGCAGAGAATATTCCTTAGAACCTTAATTTTAATTCTATTTTATTGTGTATACATTATCGAAATTAGTGGCTTCTCGTTGGTGTTTTCTTTGGTGTTCTTCAATTAAAGTAGAAAAGCATGGGGGAATTAATAAATTAAATTAGTTTGATA

mRNA sequence

TTCATTTTTTCCTCTCTCAGGTCAATTTTCAGCGGCGCGCTCTAAATTCTCCTCCCCGATCTTCTTCATCATTCCCCCCCTCCCCAAATCGGCTGAGATCCGACGACCTTCGTCGGATTTCGCCATCACCATGAAAGGCTCCTGCACTTTGCTCGCCTCCGTCCTTGCTGCCTCTACCATGGCTTTCTCCTCTTCATCCTCCTCCACTGGAGATCGCGACCTTCCTCTTTATCCTCCCTCTCATCAGGGCTTCGTTCCGGAATCTGGTGCGAACAGAGGTTGCGGCGCGGATTCTTCATCGGAGAAGGAGAAATTTGCGCCGAGGTTTGATGGATTGAGATTCATTGAGACTTTGGTAACTGCTCATAGATAATAATAAAATCCTTAAATGATGCATGTCCTCGCTCTTTCTCCTAATCCATATACCGGATCGTATTCTGTTTCATATGATTATTAGGAAGAGAAATTTTTGTTTTTACAATTTGTGAAGTGATTTTACTGACTTTCGAAAATTATGAAGGAAAGAAAAAAAGAAAAAAGAAGAATCAAGAGATTTTGTGCGAGTTCCTCTTGTTTGTAACGGAGTTTCATTGGTGTAAGAATTGAAAAATTCATGAATGAATTGAACGGGTCTGTCTGTGTGTTTGAGAATATGCAGAGAATATTCCTTAGAACCTTAATTTTAATTCTATTTTATTGTGTATACATTATCGAAATTAGTGGCTTCTCGTTGGTGTTTTCTTTGGTGTTCTTCAATTAAAGTAGAAAAGCATGGGGGAATTAATAAATTAAATTAGTTTGATA

Coding sequence (CDS)

ATGAAAGGCTCCTGCACTTTGCTCGCCTCCGTCCTTGCTGCCTCTACCATGGCTTTCTCCTCTTCATCCTCCTCCACTGGAGATCGCGACCTTCCTCTTTATCCTCCCTCTCATCAGGGCTTCGTTCCGGAATCTGGTGCGAACAGAGGTTGCGGCGCGGATTCTTCATCGGAGAAGGAGAAATTTGCGCCGAGGTTTGATGGATTGAGATTCATTGAGACTTTGGTAACTGCTCATAGATAA

Protein sequence

MKGSCTLLASVLAASTMAFSSSSSSTGDRDLPLYPPSHQGFVPESGANRGCGADSSSEKEKFAPRFDGLRFIETLVTAHR

Homology

[Close]

BLAST of MELO.jh021363.1 vs. NCBI nr
Match: XP_008437456.1 (PREDICTED: uncharacterized protein LOC103482871 [Cucumis melo])

HSP 1 Score: 158 bits (400), Expect = 1.02e-48
Identity = 80/80 (100.00%), Postives = 80/80 (100.00%), Query Frame = 0


Query: 1  MKGSCTLLASVLAASTMAFSSSSSSTGDRDLPLYPPSHQGFVPESGANRGCGADSSSEKE 60
          MKGSCTLLASVLAASTMAFSSSSSSTGDRDLPLYPPSHQGFVPESGANRGCGADSSSEKE
Sbjct: 1  MKGSCTLLASVLAASTMAFSSSSSSTGDRDLPLYPPSHQGFVPESGANRGCGADSSSEKE 60

Query: 61 KFAPRFDGLRFIETLVTAHR 80
          KFAPRFDGLRFIETLVTAHR
Sbjct: 61 KFAPRFDGLRFIETLVTAHR 80

[Close]

BLAST of MELO.jh021363.1 vs. NCBI nr
Match: KAA0042639.1 (uncharacterized protein E6C27_scaffold44G001370 [Cucumis melo var. makuwa] >TYK06040.1 uncharacterized protein E5676_scaffold376G001410 [Cucumis melo var. makuwa])

HSP 1 Score: 147 bits (371), Expect = 3.67e-44
Identity = 79/90 (87.78%), Postives = 79/90 (87.78%), Query Frame = 0


Query: 1  MKGSCTLLASVLAASTMAFSSSSSSTGDRDLPLYPPSHQ----------GFVPESGANRG 60
          MKGSCTLLASVLAASTMAFSSSSSSTGDRDLPLYPPSHQ          GFV ESGANRG
Sbjct: 1  MKGSCTLLASVLAASTMAFSSSSSSTGDRDLPLYPPSHQALSPSPSLSIGFVSESGANRG 60

Query: 61 CGADSSSEKEKFAPRFDGLRFIETLVTAHR 80
          CGADSSSEKEKFAPRFDGLRFIETLVTAHR
Sbjct: 61 CGADSSSEKEKFAPRFDGLRFIETLVTAHR 90

[Close]

BLAST of MELO.jh021363.1 vs. NCBI nr
Match: XP_022929045.1 (uncharacterized protein LOC111435756 [Cucurbita moschata] >XP_022970121.1 uncharacterized protein LOC111469110 [Cucurbita maxima] >KAG7017053.1 hypothetical protein SDJN02_22165 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 132 bits (333), Expect = 1.77e-38
Identity = 70/81 (86.42%), Postives = 75/81 (92.59%), Query Frame = 0


Query: 1  MKGSCTLLASVLAASTMAFSSSSSSTG-DRDLPLYPPSHQGFVPESGANRGCGADSSSEK 60
          MKGSCTLLASVLAASTMAFSSSSSS+  DRDL L PPS +GFV ESG+NRGCG+DSS+EK
Sbjct: 1  MKGSCTLLASVLAASTMAFSSSSSSSNEDRDLALNPPSREGFVSESGSNRGCGSDSSAEK 60

Query: 61 EKFAPRFDGLRFIETLVTAHR 80
          EKFAPRFDGLRFIETLVTAHR
Sbjct: 61 EKFAPRFDGLRFIETLVTAHR 81

[Close]

BLAST of MELO.jh021363.1 vs. NCBI nr
Match: KAE8647827.1 (hypothetical protein Csa_000617 [Cucumis sativus])

HSP 1 Score: 132 bits (333), Expect = 4.31e-38
Identity = 72/79 (91.14%), Postives = 72/79 (91.14%), Query Frame = 0


Query: 1  MKGSCTLLASVLAASTMAFSSSSSS----TGDRDLPLYPPSHQGFVPESGANRGCGADSS 60
          MKGSCTLLASVLAASTMAFSSSSSS    TGDRDLPLY  SHQGFV ESGANRGCGADSS
Sbjct: 1  MKGSCTLLASVLAASTMAFSSSSSSSSSFTGDRDLPLYSLSHQGFVSESGANRGCGADSS 60

Query: 61 SEKEKFAPRFDGLRFIETL 75
          SEKEKFAPRFDGLRFIETL
Sbjct: 61 SEKEKFAPRFDGLRFIETL 79

[Close]

BLAST of MELO.jh021363.1 vs. NCBI nr
Match: XP_023520500.1 (uncharacterized protein LOC111783920 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 131 bits (330), Expect = 5.07e-38
Identity = 69/81 (85.19%), Postives = 75/81 (92.59%), Query Frame = 0


Query: 1  MKGSCTLLASVLAASTMAFSSSSSSTG-DRDLPLYPPSHQGFVPESGANRGCGADSSSEK 60
          MKGSCTLLASVLAASTMAFSSSSSS+  DRDL L PPS +GFV ESG+NRGCG+D+S+EK
Sbjct: 1  MKGSCTLLASVLAASTMAFSSSSSSSNEDRDLALNPPSREGFVSESGSNRGCGSDASAEK 60

Query: 61 EKFAPRFDGLRFIETLVTAHR 80
          EKFAPRFDGLRFIETLVTAHR
Sbjct: 61 EKFAPRFDGLRFIETLVTAHR 81

[Close]

BLAST of MELO.jh021363.1 vs. ExPASy TrEMBL
Match: A0A1S3AU25 (uncharacterized protein LOC103482871 OS=Cucumis melo OX=3656 GN=LOC103482871 PE=4 SV=1)

HSP 1 Score: 158 bits (400), Expect = 4.96e-49
Identity = 80/80 (100.00%), Postives = 80/80 (100.00%), Query Frame = 0


Query: 1  MKGSCTLLASVLAASTMAFSSSSSSTGDRDLPLYPPSHQGFVPESGANRGCGADSSSEKE 60
          MKGSCTLLASVLAASTMAFSSSSSSTGDRDLPLYPPSHQGFVPESGANRGCGADSSSEKE
Sbjct: 1  MKGSCTLLASVLAASTMAFSSSSSSTGDRDLPLYPPSHQGFVPESGANRGCGADSSSEKE 60

Query: 61 KFAPRFDGLRFIETLVTAHR 80
          KFAPRFDGLRFIETLVTAHR
Sbjct: 61 KFAPRFDGLRFIETLVTAHR 80

[Close]

BLAST of MELO.jh021363.1 vs. ExPASy TrEMBL
Match: A0A5A7TMP9 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold376G001410 PE=4 SV=1)

HSP 1 Score: 147 bits (371), Expect = 1.78e-44
Identity = 79/90 (87.78%), Postives = 79/90 (87.78%), Query Frame = 0


Query: 1  MKGSCTLLASVLAASTMAFSSSSSSTGDRDLPLYPPSHQ----------GFVPESGANRG 60
          MKGSCTLLASVLAASTMAFSSSSSSTGDRDLPLYPPSHQ          GFV ESGANRG
Sbjct: 1  MKGSCTLLASVLAASTMAFSSSSSSTGDRDLPLYPPSHQALSPSPSLSIGFVSESGANRG 60

Query: 61 CGADSSSEKEKFAPRFDGLRFIETLVTAHR 80
          CGADSSSEKEKFAPRFDGLRFIETLVTAHR
Sbjct: 61 CGADSSSEKEKFAPRFDGLRFIETLVTAHR 90

[Close]

BLAST of MELO.jh021363.1 vs. ExPASy TrEMBL
Match: A0A0A0KQK5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G146940 PE=4 SV=1)

HSP 1 Score: 142 bits (359), Expect = 1.01e-42
Identity = 77/84 (91.67%), Postives = 77/84 (91.67%), Query Frame = 0


Query: 1  MKGSCTLLASVLAASTMAFSSSSSS----TGDRDLPLYPPSHQGFVPESGANRGCGADSS 60
          MKGSCTLLASVLAASTMAFSSSSSS    TGDRDLPLY  SHQGFV ESGANRGCGADSS
Sbjct: 1  MKGSCTLLASVLAASTMAFSSSSSSSSSFTGDRDLPLYSLSHQGFVSESGANRGCGADSS 60

Query: 61 SEKEKFAPRFDGLRFIETLVTAHR 80
          SEKEKFAPRFDGLRFIETLVTAHR
Sbjct: 61 SEKEKFAPRFDGLRFIETLVTAHR 84

[Close]

BLAST of MELO.jh021363.1 vs. ExPASy TrEMBL
Match: A0A6J1HZR1 (uncharacterized protein LOC111469110 OS=Cucurbita maxima OX=3661 GN=LOC111469110 PE=4 SV=1)

HSP 1 Score: 132 bits (333), Expect = 8.55e-39
Identity = 70/81 (86.42%), Postives = 75/81 (92.59%), Query Frame = 0


Query: 1  MKGSCTLLASVLAASTMAFSSSSSSTG-DRDLPLYPPSHQGFVPESGANRGCGADSSSEK 60
          MKGSCTLLASVLAASTMAFSSSSSS+  DRDL L PPS +GFV ESG+NRGCG+DSS+EK
Sbjct: 1  MKGSCTLLASVLAASTMAFSSSSSSSNEDRDLALNPPSREGFVSESGSNRGCGSDSSAEK 60

Query: 61 EKFAPRFDGLRFIETLVTAHR 80
          EKFAPRFDGLRFIETLVTAHR
Sbjct: 61 EKFAPRFDGLRFIETLVTAHR 81

[Close]

BLAST of MELO.jh021363.1 vs. ExPASy TrEMBL
Match: A0A6J1ET49 (uncharacterized protein LOC111435756 OS=Cucurbita moschata OX=3662 GN=LOC111435756 PE=4 SV=1)

HSP 1 Score: 132 bits (333), Expect = 8.55e-39
Identity = 70/81 (86.42%), Postives = 75/81 (92.59%), Query Frame = 0


Query: 1  MKGSCTLLASVLAASTMAFSSSSSSTG-DRDLPLYPPSHQGFVPESGANRGCGADSSSEK 60
          MKGSCTLLASVLAASTMAFSSSSSS+  DRDL L PPS +GFV ESG+NRGCG+DSS+EK
Sbjct: 1  MKGSCTLLASVLAASTMAFSSSSSSSNEDRDLALNPPSREGFVSESGSNRGCGSDSSAEK 60

Query: 61 EKFAPRFDGLRFIETLVTAHR 80
          EKFAPRFDGLRFIETLVTAHR
Sbjct: 61 EKFAPRFDGLRFIETLVTAHR 81

[Close]

BLAST of MELO.jh021363.1 vs. TAIR 10
Match: AT5G42110.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: 6 growth stages; Has 36 Blast hits to 36 proteins in 8 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 36; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 49.3 bits (116), Expect = 1.7e-06
Identity = 39/80 (48.75%), Postives = 43/80 (53.75%), Query Frame = 0


Query: 1  MKGSCTLLASVLAASTMAFSSSSSSTGDRDLPLYPPSHQGFVPESGANRGCGADSSSEKE 60
          MK S  ++ASV+A ST A SSSS       LP   P     V ES    G         +
Sbjct: 1  MKVSSGVVASVIAVSTAALSSSSI------LPPVSPK----VWESRKTNG--------SD 60

Query: 61 KFAPRFDGLRFIETLVTAHR 81
           F PRFDGLRFIETLVTAHR
Sbjct: 61 NFEPRFDGLRFIETLVTAHR 62

[Close]

BLAST of MELO.jh021363.1 vs. TAIR 10
Match: AT4G28290.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; Has 45 Blast hits to 45 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 45; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 48.9 bits (115), Expect = 2.2e-06
Identity = 37/82 (45.12%), Postives = 46/82 (56.10%), Query Frame = 0


Query: 1  MKGSCTLLASV-LAASTMAFSSSSSSTG-DRDLPLYPPSHQGFVPESGANRGCGADSSSE 60
          MK +  + AS+ +AAS  A S+ S++T      P    S Q    +    +G   D    
Sbjct: 1  MKKTGIIAASISVAASATAISAGSTNTSVSFSSPESNLSRQEAKEKQRKKKGSSEDGGD- 60

Query: 61 KEKFAPRFDGLRFIETLVTAHR 81
           EKFAPRFDGLRFIETLVTAHR
Sbjct: 61 -EKFAPRFDGLRFIETLVTAHR 80

The following BLAST results are available for this feature:

BLAST of MELO.jh021363.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008437456.1	1.02e-48	100.00	PREDICTED: uncharacterized protein LOC103482871 [Cucumis melo]	[more]
KAA0042639.1	3.67e-44	87.78	uncharacterized protein E6C27_scaffold44G001370 [Cucumis melo var. makuwa] >TYK0...	[more]
XP_022929045.1	1.77e-38	86.42	uncharacterized protein LOC111435756 [Cucurbita moschata] >XP_022970121.1 unchar...	[more]
KAE8647827.1	4.31e-38	91.14	hypothetical protein Csa_000617 [Cucumis sativus]	[more]
XP_023520500.1	5.07e-38	85.19	uncharacterized protein LOC111783920 [Cucurbita pepo subsp. pepo]	[more]

BLAST of MELO.jh021363.1 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of MELO.jh021363.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3AU25	4.96e-49	100.00	uncharacterized protein LOC103482871 OS=Cucumis melo OX=3656 GN=LOC103482871 PE=...	[more]
A0A5A7TMP9	1.78e-44	87.78	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A0A0KQK5	1.01e-42	91.67	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G146940 PE=4 SV=1	[more]
A0A6J1HZR1	8.55e-39	86.42	uncharacterized protein LOC111469110 OS=Cucurbita maxima OX=3661 GN=LOC111469110...	[more]
A0A6J1ET49	8.55e-39	86.42	uncharacterized protein LOC111435756 OS=Cucurbita moschata OX=3662 GN=LOC1114357...	[more]

BLAST of MELO.jh021363.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G42110.1	1.7e-06	48.75	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT4G28290.1	2.2e-06	45.12	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Harukei-3) v1.41
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 20..59
None	No IPR available	PANTHER	PTHR34683:SF3	BNAUNNG00100D PROTEIN	coord: 1..80
None	No IPR available	PANTHER	PTHR34683	EXPRESSED PROTEIN-RELATED	coord: 1..80

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO.jh021363.1.t1	MELO.jh021363.1.t1	mRNA