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Sequences
The following sequences are available for this feature:
Gene sequence (with intron) Legend: five_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. TGCCTCCGGTCAAAGTCATACGAATTACAGTAAGAAACTGCCCCAAATCCAAGAAAACATGCAATACACAAACGAAAGAAGAATAAAACCTAGAACAAACCAGTATAGAAGCAAAGCCCTCAGATCTCATAGCTTTCATAGAATCATACACGGTATAAAGCAAATGGCATTTGTTCACCAAAACCCTTTACAAACAGTGATGTGTGTGAGATTAGATGTATGGATTGAACGAAAGTGGAGTAAGGATGGAGGTGGAGATAAGAAAAGGCTAATGACAAACAAAGCCATCTGCAACCGTTCACTTCATAGTGATTTTCCATCATTGGGCAAAATCGAAGTTACTGATATCAACCAAGACAGGAAAAGCCGAAGAATTCACAGTAGAATAGAAAGAATCAGAAAACAGAAGCATACCGAGGATTTTATAGAGATATCTGAAGTCCAGGATTTGGAATGGATTTCCACATGTGTTGAAATCTATTGAGAAGCCAAGCACCGTAGCATCCAACTAAAGGGCTAATTCATAGTTACCAGTCACACTTAGGCTTCCAAGTTTAAAATAGAGATGCAACCATGGTAATGTGTAAACAAACAATTAGATGAATAGGTCATTTCTTCAAGATTCTAATTTTGTAAGTGTTCAAAAATTTGAATATTTATTTAATTAGATTAAATTTGAAAGTTTGTATCAAAATG mRNA sequence TGCCTCCGGTCAAAGTCATACGAATTACAGTAAGAAACTGCCCCAAATCCAAGAAAACATGCAATACACAAACGAAAGAAGAATAAAACCTAGAACAAACCAGTATAGAAGCAAAGCCCTCAGATCTCATAGCTTTCATAGAATCATACACGGTATAAAGCAAATGGCATTTGTTCACCAAAACCCTTTACAAACAGTGATGTGTGTGAGATTAGATGTATGGATTGAACGAAAGTGGAGTAAGGATGGAGGTGGAGATAAGAAAAGGCTAATGACAAACAAAGCCATCTGCAACCGTTCACTTCATAGTGATTTTCCATCATTGGGCAAAATCGAAGTTACTGATATCAACCAAGACAGGAAAAGCCGAAGAATTCACAGTAGAATAGAAAGAATCAGAAAACAGAAGCATACCGAGGATTTTATAGAGATATCTGAAGTCCAGGATTTGGAATGGATTTCCACATGTGTTGAAATCTATTGAGAAGCCAAGCACCGTAGCATCCAACTAAAGGGCTAATTCATAGTTACCAGTCACACTTAGGCTTCCAAGTTTAAAATAGAGATGCAACCATGGTAATGTGTAAACAAACAATTAGATGAATAGGTCATTTCTTCAAGATTCTAATTTTGTAAGTGTTCAAAAATTTGAATATTTATTTAATTAGATTAAATTTGAAAGTTTGTATCAAAATG Coding sequence (CDS) ATGCAATACACAAACGAAAGAAGAATAAAACCTAGAACAAACCAGTATAGAAGCAAAGCCCTCAGATCTCATAGCTTTCATAGAATCATACACGGTATAAAGCAAATGGCATTTGTTCACCAAAACCCTTTACAAACAGTGATGTGTGTGAGATTAGATGTATGGATTGAACGAAAGTGGAGTAAGGATGGAGGTGGAGATAAGAAAAGGCTAATGACAAACAAAGCCATCTGCAACCGTTCACTTCATAGTGATTTTCCATCATTGGGCAAAATCGAAGTTACTGATATCAACCAAGACAGGAAAAGCCGAAGAATTCACAGTAGAATAGAAAGAATCAGAAAACAGAAGCATACCGAGGATTTTATAGAGATATCTGAAGTCCAGGATTTGGAATGGATTTCCACATGTGTTGAAATCTATTGA Protein sequence MQYTNERRIKPRTNQYRSKALRSHSFHRIIHGIKQMAFVHQNPLQTVMCVRLDVWIERKWSKDGGGDKKRLMTNKAICNRSLHSDFPSLGKIEVTDINQDRKSRRIHSRIERIRKQKHTEDFIEISEVQDLEWISTCVEIY*
Homology
BLAST of CSPI06G03800 vs. ExPASy TrEMBL
Match: A0A0A0K8H8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G044010 PE=4 SV=1) HSP 1 Score: 131.7 bits (330), Expect = 2.4e-27 Identity = 62/81 (76.54%), Postives = 70/81 (86.42%), Query Frame = 0 Query: 36 MAFVHQNPLQTVMCVRLDVWIERKWSKDGGGDKKRLMTNKAICNRSLHSDFPSLGKIEVT 95 MAFVHQ PLQTVMCVRLDVWIERKWSKDGGGDKKRLM NKAICN S++ DFPSLGK EV Sbjct: 1 MAFVHQKPLQTVMCVRLDVWIERKWSKDGGGDKKRLMMNKAICNLSIYIDFPSLGKTEVP 60
Query: 96 DINQDRKSRRIHSRIERIRKQ 117 +INQD+KS RI+S+ + + Q Sbjct: 61 NINQDKKSLRIYSQKSKKKNQ 81
BLAST of CSPI06G03800 vs. NCBI nr
Match: KAE8646628.1 (hypothetical protein Csa_023588, partial [Cucumis sativus]) HSP 1 Score: 70.9 bits (172), Expect = 1.0e-08 Identity = 34/52 (65.38%), Postives = 42/52 (80.77%), Query Frame = 0 Query: 65 GGDKKRLMTNKAICNRSLHSDFPSLGKIEVTDINQDRKSRRIHSRIERIRKQ 117 GGDKKRLM NKAICN S++ DFPSLGK EV +INQD+KS RI+S+ + + Q Sbjct: 10 GGDKKRLMMNKAICNLSIYIDFPSLGKTEVPNINQDKKSLRIYSQKSKKKNQ 61
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A0A0K8H8 | 2.4e-27 | 76.54 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G044010 PE=4 SV=1 | [more] |
Match Name | E-value | Identity | Description | |
KAE8646628.1 | 1.0e-08 | 65.38 | hypothetical protein Csa_023588, partial [Cucumis sativus] | [more] |
Match Name | E-value | Identity | Description | |
Relationships
The following mRNA feature(s) are a part of this gene:
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