Cucsat.G3545 (gene) Cucumber (B10) v3

Overview
NameCucsat.G3545
Typegene
OrganismCucumis sativus L. var. sativus cv B10 (Cucumber (B10) v3)
DescriptionUnknown protein
Locationctg1047: 632045 .. 640777 (-)
RNA-Seq ExpressionCucsat.G3545
SyntenyCucsat.G3545
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
TAATAAAATTCCAATCTGCAACAGAGTATTTATCCTTTCAAACCAATACAGATTCTAATATTCTCACTCAACACAATAACTTATTCAAACAAAAACCCACTCTCCCTCTTCCAAATTATAAATATTGTGTGTGTGTGTTCTTTCCATTCATAGCCAAATATAGAGAAGGAAGACTTCCTCTTTCCCTTTCAACATTCTTCTTCTTTAAGACATGGCTAAGGTTACTGGAAATAGTCTTTACTTTATAAGGTCGATCCTTCTCGTGCTGGTTTTATGTATTTAATTATCGGTTCCATTCTTTGTGTCTGTTTCTTTGATGTTCTTTTCTAATTTAGCAATGTAATGGCAGGCGAATGAGCTCTTCGGTTGCATCTGAGCAACTTAAGGCACAAACAACTGCATCAATGGTGGTTAGGAAGGTGAAGGCAGCTGTGGAGACAGGCGGTTATGATAATGAGGTAGTTGAACAGAAGAAGACGTTTTGGATGAAAGATCCTAAGAGTGGAAACTGGATTCCCGAGAATCATTTTGAAGAGATGGATGTGGTGGAATTGAGGGAGAAACTGCTGGCTAAACCTAAGAAGCTGCTCTAAAACAGCAAGTGAAAAGCTTCATTTATGTGCAAGAACAAAAGTTCCACCTTTATCCATCTTATCCATGTTACTAAATAACACCTACTGCAAAAACTATTCTAAACTACTTTTCTCTCTCTAATCTGTCACTTCTATCAACTTAAAGTCTCATCTGAATCCTCTAAAGTTCAATGGTGTTGATTTCGACCGATGAAAGAAGGGAATCCGAATCTCATCAAGTTTATCAAAGAAAGCAAATCGCCAGATCATAGTAGTTGCAACAAGTCAAGAATGATGAGTTGGCCTACACAAATTAGTAAATACGTACAATTATGGACGAACATCTCAATAGATATTTATTCTATGATTTCTTTTATTAAATGTTTATTACTTTTCAGAAGGGACCATCCCAATGACATCCTTATCACTCGAGTTCCTTCTAATGAGAAAAGAGGGAAAGAGATAGCATTTCTTTCTTTTGATAAGGGACCATCTTACTATGCTAAAGAAAAAAAATGAGAGACCATCGTAGCGACATTTCATAT

Coding sequence (CDS)

ATGAAAGAAGGGAATCCGAATCTCATCAAGTTTATCAAAGAAAGCAAATCGCCAGATCATAGTAGTTGCAACAAGTCAAGAATGATGAGTTGGCCTACACAAATTAGTAAATACGTACAATTATGGACGAACATCTCAATAGATATTTATTCTATGATTTCTTTTATTAAATGTTTATTACTTTTCAGAAGGGACCATCCCAATGACATCCTTATCACTCGAGTTCCTTCTAATGAGAAAAGAGGGAAAGAGATAGCATTTCTTTCTTTTGATAAGGGACCATCTTACTATGCTAAAGAAAAAAAATGA

Protein sequence

MKEGNPNLIKFIKESKSPDHSSCNKSRMMSWPTQISKYVQLWTNISIDIYSMISFIKCLLLFRRDHPNDILITRVPSNEKRGKEIAFLSFDKGPSYYAKEKK
Homology
[Close]
BLAST of Cucsat.G3545 vs. NCBI nr
Match: KGN45442.1 (hypothetical protein Csa_016897 [Cucumis sativus])

HSP 1 Score: 208 bits (529), Expect = 1.04e-67
Identity = 102/102 (100.00%), Postives = 102/102 (100.00%), Query Frame = 0 

Query: 1   MKEGNPNLIKFIKESKSPDHSSCNKSRMMSWPTQISKYVQLWTNISIDIYSMISFIKCLL 60
           MKEGNPNLIKFIKESKSPDHSSCNKSRMMSWPTQISKYVQLWTNISIDIYSMISFIKCLL
Sbjct: 1   MKEGNPNLIKFIKESKSPDHSSCNKSRMMSWPTQISKYVQLWTNISIDIYSMISFIKCLL 60

Query: 61  LFRRDHPNDILITRVPSNEKRGKEIAFLSFDKGPSYYAKEKK 102
           LFRRDHPNDILITRVPSNEKRGKEIAFLSFDKGPSYYAKEKK
Sbjct: 61  LFRRDHPNDILITRVPSNEKRGKEIAFLSFDKGPSYYAKEKK 102

[Close]
BLAST of Cucsat.G3545 vs. ExPASy TrEMBL
Match: A0A0A0KAN2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G448040 PE=4 SV=1)

HSP 1 Score: 208 bits (529), Expect = 5.03e-68
Identity = 102/102 (100.00%), Postives = 102/102 (100.00%), Query Frame = 0 

Query: 1   MKEGNPNLIKFIKESKSPDHSSCNKSRMMSWPTQISKYVQLWTNISIDIYSMISFIKCLL 60
           MKEGNPNLIKFIKESKSPDHSSCNKSRMMSWPTQISKYVQLWTNISIDIYSMISFIKCLL
Sbjct: 1   MKEGNPNLIKFIKESKSPDHSSCNKSRMMSWPTQISKYVQLWTNISIDIYSMISFIKCLL 60

Query: 61  LFRRDHPNDILITRVPSNEKRGKEIAFLSFDKGPSYYAKEKK 102
           LFRRDHPNDILITRVPSNEKRGKEIAFLSFDKGPSYYAKEKK
Sbjct: 61  LFRRDHPNDILITRVPSNEKRGKEIAFLSFDKGPSYYAKEKK 102

The following BLAST results are available for this feature:
BLAST of Cucsat.G3545 vs.
Match NameE-valueIdentityDescription
BLAST of Cucsat.G3545 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN45442.11.04e-67100.00hypothetical protein Csa_016897 [Cucumis sativus][more]
BLAST of Cucsat.G3545 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KAN25.03e-68100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G448040 PE=4 SV=1[more]
BLAST of Cucsat.G3545 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cucsat.G3545.T1Cucsat.G3545.T1mRNA
Cucsat.G3545.T4Cucsat.G3545.T4mRNA
Cucsat.G3545.T3Cucsat.G3545.T3mRNA