Cucsat.G13 (gene) Cucumber (B10) v3

Overview


Name	Cucsat.G13
Type	gene
Organism	Cucumis sativus L. var. sativus cv B10 (Cucumber (B10) v3)
Description	FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages;
Location	ctg1: 230648 .. 234596 (-)
RNA-Seq Expression	Cucsat.G13
Synteny	Cucsat.G13

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

GCCTTGGATTTTGAGACCTCTTATTTCAAGCCCCTCCTTTGTTGATATTCGTAAGCCCAATTATGATCTCAACTTCTTCCAGAATAACCTCCGTCCAATTGCGACGATGAACGGAGTTTCTTTTGTTTGATTAATTCACTGTTGTGGCAGAAAATTCTCTGGAAATGGAACCGGAAGGAATCGTAGAGCATCGAAGCTCCATTGCCGCTCCATTCATTTTCTTTATCGTTATCGGTTTTCAGTTTCTCGCTAAATGGCTGGAGCACCTGAAGAAGGTTCGCCTTTTCGTTTGATTTTATTTTTTCCGTTGGAGTTCTTTTCGTGTTTGTATTTTCTATCATTCCGCTTGTTTTTCAATCCTAAGCTTGTTATTTATAATTGAATTTTGAGGTTTGAGCTGTAGCGCGTTTCAGTATTTTTGTTGACAGACTTGAGAATGCAATTTATCTAACTGTGCTTCGTGAAGTTTACGATATTGGATTGAAGACATTGTGATTTGATTAGTTTAGGAACGCGATGCATTTAATGTGGAGATCTATGGACATTTTCAGTTTTAATGTCTGGGAATTTGCTAATGTTATAATTTGTTATCCGTTCAATCTTGTCAACTTGTTTGTTTTGAAACAATCGTGTTTCCATCATGCGTGTACTTTTCAGAGAGGTTCCAACAGCCAGGTGGAAATGGAGTTGCGCAAATCAATAAAGCAACTTCTGAAGGAGGCTAGCACCTTATCTCAGTGAGTAGTATTTTCCAGCTCGATTCAGCATTAGACAGTGTTAATTTGGCTCAAATCATCTTACAAAAAAAAAAAAAAAGGCTCAAATCATTCATTCCATATGATTGTTTGCAACTGTTATGGCTGTCATGGGGATCATATTTATTTGCGTTTATGTTCTTGTAGACCATCTACATTTGCACAGGCTGCAAAACTTCGGAGGTTGGCAGCCGCTAAGGAGAAGGAGCTGGCAAATTGTGAGGCTATAATTAATTCATCCCCCGATATTCAAATATTCCCTTAATTTTTTTTTTAGCTAATGAGTTGCTGAGAGAATATTGTGAAATGCTTTATACCTCTTCTCATCAATAACGGGTAGGGGAATAAGTTTGCTATTGTATGGTAAGGTTTGCTTTATAAAACATCGTTGCATGAGCAGTTTTGAGGATGTTGCTTGGACCATTGACTGTTATGTGATATAGGAATCTAAGGATTAGAAGCTTGAGCAACCACTAAGCTATTGACAATTAGAAAGAATGGTTCTCTTATTGAAACCAAAGAAAAAAAAGGTTATACACTCCAAACTAACAGTAAGATGGGTGTATGTGCTGGTAAATTTTATTGCCGCTCCATCCAATGAAACTGGGTAATCGTAAATATATTTGCATTGCAACTTCATCCAACATGGTGCTCATGCTGCCAATTGATTCATATATGGACCATGGTTTAACCGTTGGAACTTGGAGATCATCGAACAAGCTCTTGTCTATAATATGACTCTGGATGTGAGGGAACTAAAGAAGTGTTATGTATATCATAGCAAGTTGAAAGCAACTACTCATTGGTAAAATCGGTCTTATTCTAGGAATCATGGTAAATGTACTACATTAGGCGTTAGCACATGCAAATGGGAGAAGTTGATTTACTCTATTGTGAATGATTGTTGCATGCTTGAGGTGTCGGCATCCAACTAATATAGGATATTGACGTAGATGAACTTGTGTAGTGGCACCCTTTCTTATACAAGACCATGTTTTCCTTGACAATATGTGGAGTGGGGGGGGAAACCTCTGGCCTTGAGGTCAATAGAGTTTTATGCCAGTTTTTCTCAAATCTAATATCACCCCTAATTCTAACTAAAATGTTGTGTGGCATAGTTATAGTTCTTAACTGGCAAATTTTCATGACTGTATCTATTTCTTTGGGCTCATTAAATCACATTTCTCATTTGGCCCATGTTAAATGCCAATTTTGATGTAGGGCTTTACCAAGGTTATCCATGTTCAATTATTCGTTTCAAGTTATCCAACTACTGAGAGTGATTCTTATGTTTTCTAAAAGGCCAATATCACTCAATATGCATCTTGAAGTCTAGCTAAAATATAAGAGCAGTAAAATAGTCTTATTTATCATTATAGCCTAGCCTCAATTTCTGTTCATCTTATTTCAGTTGTTTTCTCCAATTGATTACTTTCCTTCCCTTGTGTACTACTTATTAAGATGCTTCGGATTACACTTTTAATTCAATTTGAATGACATTGCTGCCAGATCAAGAATCACGTAATAAGGAGATCAAGACGTCATATGGTTTATATAGTCAAGTACTGTTGGTATCGAAGGTATTATGTTCTTCTAAATGTTCTTCTAAATGTGTCTATATGTTTGCAGTTCTTTAAAAAGTTTGTTATCTTATGGTCATGTAGGTTATTATACATATTGTGCTGGTTTGCTGGTTTTGGAGAGCTTCTGTTGCTACTGTACCTCATCACCTTGTGCAGCCATTTGGTAATCACTCTCATCGCAAGCATAATTTCTGATGAACTATTAAAAATATGTCATTTCATTTAAAATTTTAAATATCAGTGTCTTGATGAATCCCCCTACTGCAGGAAAGTTTTTATCTTGGAGGGCTGGAGGTACCGTAAATGATTATGTGAAGGTAGAATTCTCATTTATTTGCATATAACCTCATCGATCATATTGCATTTATTTTATCTCTTGACCATAAACATAACACCACTTTCACCCAAAGAAATGATATTAGTGAGGAATGAATGTTCTGCTTCGATTGAGGAGGTGCTCCTAGGTTTGCCAATTTGGAAGGAAGGAAAAGTTTTGTGGCCCACTAGTTTCTTTGCTATCTTCAATCTCGTGGGGGGTTTGGCTTGAGAGAGACAATAGGATTTCTTAGAGAGATGTGCGGGAGGAGGTGAGGTTTAACTAACACCTAGTTGAGGGCATCCATCACTGGACCTTTTTGTAATTTCCTCGATTGGTAGTGATTTTTGGCTTGGATGCCCTTGTTGTAGGTTTTTTTGGACTTTTTTTTTGTTGGCCATTGTTTTCTTGCTGAAATCTCGGTTTCTTACCAAAAGATTAAAAAATACAGCAGTAAAGAGTTGGGGTAGTTTTAAACAGTGATTTGTTATAAATAGAATGAGCATAAAAAGTTAAATGTATCAATTATTTTGTTGGTTTTTGTTGGATTAGGGCTTAAGTAATCTCAATAACTAACTAAGAGCTCATGGGTTCAATACATGGTTGTTCTGTGAGATTAGTCGAGATGTGCATAAACCGATTCGGACATTTACGGATTAAAAAAAATTAGTGCTCGAGTGGGGAAGATTCTCGGAACCTCAAATACTCGAGGGTGTTTTATTTTATATTAGGCAACTACATATAATAACATGAAATTACTATCTATCACCACAATCATGGCTCTGCACAAATGAGAGAGTATGGTGATTCGTAGGTAAATTTTAATGATGAACTGCAGGTTGGAATTATACCTTGGTTGATACTGTCCACAAGGGTTAGCAAGTTTGTATTTCGAGTGGTGAAGTAAAAATGGGGATTGAAGGTAATTGTGATGAAGAATGAACGATACATCGCCACATGTGCTATGTACAATATTTGGCAACCAATATTTTCCTAAATGTGAGGGGTGGCTGGAGAAGTTTTTACAGCCCCACCACTATTTCTTCTTGTAAGGTTCAGCATTGTTGTTCTTTTTCTTTCTTTTCCCACCATATATTTTCCCTTTCATTCTTCTTTTTTGGGAAACTCTTTATCTTAGGTATCATTTATTGTTATTATTTTTTACTTAGAATTAAGATATTCTATAGATATATATATAGATTGGTTGCCTGTATGCTGCTTAGGGTAAGGGAAGGTTGGATCCTAAATCTTCACTAATCTTAGTGCTAAAAAAAAATGAAACTTTCAGGATATATCAAAACTTTGAATATGAATTTCAAAGTGCATATAAATTACATTGAAAATACAATAGATGTGATAATACATTGTTTCATGTAAGTTCTTGTGCAGTGGTT

Coding sequence (CDS)

ATGGAACCGGAAGGAATCGTAGAGCATCGAAGCTCCATTGCCGCTCCATTCATTTTCTTTATCGTTATCGGTTTTCAGTTTCTCGCTAAATGGCTGGAGCACCTGAAGAAGAGAGGTTCCAACAGCCAGGTGGAAATGGAGTTGCGCAAATCAATAAAGCAACTTCTGAAGGAGGCTAGCACCTTATCTCAACCATCTACATTTGCACAGGCTGCAAAACTTCGGAGGTTGGCAGCCGCTAAGGAGAAGGAGCTGGCAAATTATCAAGAATCACGTAATAAGGAGATCAAGACGTCATATGGTTTATATAGTCAAGTACTGTTGGTATCGAAGGTTATTATACATATTGTGCTGGTTTGCTGGTTTTGGAGAGCTTCTGTTGCTACTGTACCTCATCACCTTGTGCAGCCATTTGGAAAGTTTTTATCTTGGAGGGCTGGAGGTACCGTAAATGATTATGTGAAGGTTGGAATTATACCTTGGTTGATACTGTCCACAAGGGTTAGCAAGTTTGTATTTCGAGTGGTGAAGTAA

Protein sequence

MEPEGIVEHRSSIAAPFIFFIVIGFQFLAKWLEHLKKRGSNSQVEMELRKSIKQLLKEASTLSQPSTFAQAAKLRRLAAAKEKELANYQESRNKEIKTSYGLYSQVLLVSKVIIHIVLVCWFWRASVATVPHHLVQPFGKFLSWRAGGTVNDYVKVGIIPWLILSTRVSKFVFRVVK

Homology

[Close]

BLAST of Cucsat.G13 vs. ExPASy Swiss-Prot
Match: Q1H5D2 (Protein GET1 OS=Arabidopsis thaliana OX=3702 GN=GET1 PE=1 SV=1)

HSP 1 Score: 104.0 bits (258), Expect = 1.0e-21
Identity = 55/86 (63.95%), Postives = 66/86 (76.74%), Query Frame = 0


Query: 1  MEPEGIVEHRSSIAAPFIFFIVIGFQFLAKWLEHLKKRGSNSQVEMELRKSIKQLLKEAS 60
          ME E ++E R  +AAP  F +V+ FQ L+KWL+ LKK+GS +  E ELR  IKQLL+EAS
Sbjct: 1  MEGEKLIEDRGFLAAPLTFVVVVVFQLLSKWLDQLKKKGSKNTRESELRTEIKQLLREAS 60

Query: 61 TLSQPSTFAQAAKLRRLAAAKEKELA 87
           LSQP+TFAQAAKLRR AA KEKELA
Sbjct: 61 ALSQPATFAQAAKLRRSAATKEKELA 86

[Close]

BLAST of Cucsat.G13 vs. NCBI nr
Match: XP_004146176.1 (uncharacterized protein LOC101204142 [Cucumis sativus] >KGN55607.1 hypothetical protein Csa_010199 [Cucumis sativus])

HSP 1 Score: 164 bits (416), Expect = 1.88e-49
Identity = 87/87 (100.00%), Postives = 87/87 (100.00%), Query Frame = 0


Query: 1  MEPEGIVEHRSSIAAPFIFFIVIGFQFLAKWLEHLKKRGSNSQVEMELRKSIKQLLKEAS 60
          MEPEGIVEHRSSIAAPFIFFIVIGFQFLAKWLEHLKKRGSNSQVEMELRKSIKQLLKEAS
Sbjct: 1  MEPEGIVEHRSSIAAPFIFFIVIGFQFLAKWLEHLKKRGSNSQVEMELRKSIKQLLKEAS 60

Query: 61 TLSQPSTFAQAAKLRRLAAAKEKELAN 87
          TLSQPSTFAQAAKLRRLAAAKEKELAN
Sbjct: 61 TLSQPSTFAQAAKLRRLAAAKEKELAN 87

[Close]

BLAST of Cucsat.G13 vs. NCBI nr
Match: XP_008448478.1 (PREDICTED: uncharacterized protein LOC103490650 [Cucumis melo])

HSP 1 Score: 152 bits (385), Expect = 1.03e-44
Identity = 81/87 (93.10%), Postives = 84/87 (96.55%), Query Frame = 0


Query: 1  MEPEGIVEHRSSIAAPFIFFIVIGFQFLAKWLEHLKKRGSNSQVEMELRKSIKQLLKEAS 60
          ME EGIVEH SSIAAPFIFFIVIGFQFLA+WLEHLKK GSNSQVE+ELRKSIKQLL+EAS
Sbjct: 3  MEAEGIVEHGSSIAAPFIFFIVIGFQFLARWLEHLKKGGSNSQVELELRKSIKQLLREAS 62

Query: 61 TLSQPSTFAQAAKLRRLAAAKEKELAN 87
          TLSQPSTFAQAAKLRRLAAAKEKELAN
Sbjct: 63 TLSQPSTFAQAAKLRRLAAAKEKELAN 89

[Close]

BLAST of Cucsat.G13 vs. NCBI nr
Match: XP_023007643.1 (uncharacterized protein LOC111500212 [Cucurbita maxima])

HSP 1 Score: 147 bits (370), Expect = 2.06e-42
Identity = 79/86 (91.86%), Postives = 81/86 (94.19%), Query Frame = 0


Query: 2  EPEGIVEHRSSIAAPFIFFIVIGFQFLAKWLEHLKKRGSNSQVEMELRKSIKQLLKEAST 61
          E EGIVEHRSSIAAP IF IVI FQFLA+WLEHLKK GSNSQVEMELRKSIKQLL+EAST
Sbjct: 6  EAEGIVEHRSSIAAPCIFLIVIAFQFLARWLEHLKKGGSNSQVEMELRKSIKQLLREAST 65

Query: 62 LSQPSTFAQAAKLRRLAAAKEKELAN 87
          LSQPSTFAQAAKLRRLAAAKEKELAN
Sbjct: 66 LSQPSTFAQAAKLRRLAAAKEKELAN 91

[Close]

BLAST of Cucsat.G13 vs. NCBI nr
Match: XP_038904813.1 (uncharacterized protein LOC120091071 [Benincasa hispida])

HSP 1 Score: 146 bits (369), Expect = 2.60e-42
Identity = 78/87 (89.66%), Postives = 83/87 (95.40%), Query Frame = 0


Query: 1  MEPEGIVEHRSSIAAPFIFFIVIGFQFLAKWLEHLKKRGSNSQVEMELRKSIKQLLKEAS 60
          ME E I+E++SSIAAPFIF IVIGFQFLAKWLEHLKK GSNSQ+EMELRKSIKQLL+EAS
Sbjct: 1  MEAERIIENQSSIAAPFIFLIVIGFQFLAKWLEHLKKGGSNSQMEMELRKSIKQLLREAS 60

Query: 61 TLSQPSTFAQAAKLRRLAAAKEKELAN 87
          TLSQPSTFAQAAKLRRLAAAKEKELAN
Sbjct: 61 TLSQPSTFAQAAKLRRLAAAKEKELAN 87

[Close]

BLAST of Cucsat.G13 vs. NCBI nr
Match: XP_022923433.1 (uncharacterized protein LOC111431128 [Cucurbita moschata] >KAG6577814.1 Guided entry of tail-anchored proteins factor 1, partial [Cucurbita argyrosperma subsp. sororia] >KAG7015853.1 Tail-anchored protein insertion receptor WRB [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 146 bits (369), Expect = 2.76e-42
Identity = 78/86 (90.70%), Postives = 81/86 (94.19%), Query Frame = 0


Query: 2  EPEGIVEHRSSIAAPFIFFIVIGFQFLAKWLEHLKKRGSNSQVEMELRKSIKQLLKEAST 61
          E EGIVEHRSSIAAP IF +VI FQFLA+WLEHLKK GSNSQVEMELRKSIKQLL+EAST
Sbjct: 4  EAEGIVEHRSSIAAPCIFLVVIAFQFLARWLEHLKKGGSNSQVEMELRKSIKQLLREAST 63

Query: 62 LSQPSTFAQAAKLRRLAAAKEKELAN 87
          LSQPSTFAQAAKLRRLAAAKEKELAN
Sbjct: 64 LSQPSTFAQAAKLRRLAAAKEKELAN 89

[Close]

BLAST of Cucsat.G13 vs. ExPASy TrEMBL
Match: A0A0A0L4T9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G002280 PE=3 SV=1)

HSP 1 Score: 164 bits (416), Expect = 9.10e-50
Identity = 87/87 (100.00%), Postives = 87/87 (100.00%), Query Frame = 0


Query: 1  MEPEGIVEHRSSIAAPFIFFIVIGFQFLAKWLEHLKKRGSNSQVEMELRKSIKQLLKEAS 60
          MEPEGIVEHRSSIAAPFIFFIVIGFQFLAKWLEHLKKRGSNSQVEMELRKSIKQLLKEAS
Sbjct: 1  MEPEGIVEHRSSIAAPFIFFIVIGFQFLAKWLEHLKKRGSNSQVEMELRKSIKQLLKEAS 60

Query: 61 TLSQPSTFAQAAKLRRLAAAKEKELAN 87
          TLSQPSTFAQAAKLRRLAAAKEKELAN
Sbjct: 61 TLSQPSTFAQAAKLRRLAAAKEKELAN 87

[Close]

BLAST of Cucsat.G13 vs. ExPASy TrEMBL
Match: A0A1S3BKE1 (uncharacterized protein LOC103490650 OS=Cucumis melo OX=3656 GN=LOC103490650 PE=3 SV=1)

HSP 1 Score: 152 bits (385), Expect = 4.97e-45
Identity = 81/87 (93.10%), Postives = 84/87 (96.55%), Query Frame = 0


Query: 1  MEPEGIVEHRSSIAAPFIFFIVIGFQFLAKWLEHLKKRGSNSQVEMELRKSIKQLLKEAS 60
          ME EGIVEH SSIAAPFIFFIVIGFQFLA+WLEHLKK GSNSQVE+ELRKSIKQLL+EAS
Sbjct: 3  MEAEGIVEHGSSIAAPFIFFIVIGFQFLARWLEHLKKGGSNSQVELELRKSIKQLLREAS 62

Query: 61 TLSQPSTFAQAAKLRRLAAAKEKELAN 87
          TLSQPSTFAQAAKLRRLAAAKEKELAN
Sbjct: 63 TLSQPSTFAQAAKLRRLAAAKEKELAN 89

[Close]

BLAST of Cucsat.G13 vs. ExPASy TrEMBL
Match: A0A6J1L884 (uncharacterized protein LOC111500212 OS=Cucurbita maxima OX=3661 GN=LOC111500212 PE=3 SV=1)

HSP 1 Score: 147 bits (370), Expect = 9.98e-43
Identity = 79/86 (91.86%), Postives = 81/86 (94.19%), Query Frame = 0


Query: 2  EPEGIVEHRSSIAAPFIFFIVIGFQFLAKWLEHLKKRGSNSQVEMELRKSIKQLLKEAST 61
          E EGIVEHRSSIAAP IF IVI FQFLA+WLEHLKK GSNSQVEMELRKSIKQLL+EAST
Sbjct: 6  EAEGIVEHRSSIAAPCIFLIVIAFQFLARWLEHLKKGGSNSQVEMELRKSIKQLLREAST 65

Query: 62 LSQPSTFAQAAKLRRLAAAKEKELAN 87
          LSQPSTFAQAAKLRRLAAAKEKELAN
Sbjct: 66 LSQPSTFAQAAKLRRLAAAKEKELAN 91

[Close]

BLAST of Cucsat.G13 vs. ExPASy TrEMBL
Match: A0A6J1E9M6 (uncharacterized protein LOC111431128 OS=Cucurbita moschata OX=3662 GN=LOC111431128 PE=3 SV=1)

HSP 1 Score: 146 bits (369), Expect = 1.33e-42
Identity = 78/86 (90.70%), Postives = 81/86 (94.19%), Query Frame = 0


Query: 2  EPEGIVEHRSSIAAPFIFFIVIGFQFLAKWLEHLKKRGSNSQVEMELRKSIKQLLKEAST 61
          E EGIVEHRSSIAAP IF +VI FQFLA+WLEHLKK GSNSQVEMELRKSIKQLL+EAST
Sbjct: 4  EAEGIVEHRSSIAAPCIFLVVIAFQFLARWLEHLKKGGSNSQVEMELRKSIKQLLREAST 63

Query: 62 LSQPSTFAQAAKLRRLAAAKEKELAN 87
          LSQPSTFAQAAKLRRLAAAKEKELAN
Sbjct: 64 LSQPSTFAQAAKLRRLAAAKEKELAN 89

[Close]

BLAST of Cucsat.G13 vs. ExPASy TrEMBL
Match: A0A6J1I7A9 (uncharacterized protein LOC111470261 OS=Cucurbita maxima OX=3661 GN=LOC111470261 PE=3 SV=1)

HSP 1 Score: 142 bits (357), Expect = 8.33e-41
Identity = 76/87 (87.36%), Postives = 80/87 (91.95%), Query Frame = 0


Query: 1  MEPEGIVEHRSSIAAPFIFFIVIGFQFLAKWLEHLKKRGSNSQVEMELRKSIKQLLKEAS 60
          ME E IVEHR+SI AP IF IVI FQFLA WL+HLKKRGSN+QVEMELRKSIKQLL+EAS
Sbjct: 1  MEAEEIVEHRNSIVAPSIFLIVIAFQFLAGWLDHLKKRGSNNQVEMELRKSIKQLLREAS 60

Query: 61 TLSQPSTFAQAAKLRRLAAAKEKELAN 87
          TLSQPSTFAQAAKLRRLAAAKEKELAN
Sbjct: 61 TLSQPSTFAQAAKLRRLAAAKEKELAN 87

[Close]

BLAST of Cucsat.G13 vs. TAIR 10
Match: AT4G16444.1 (FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: CHD5-like protein (InterPro:IPR007514); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 104.0 bits (258), Expect = 7.3e-23
Identity = 55/86 (63.95%), Postives = 66/86 (76.74%), Query Frame = 0


Query: 1  MEPEGIVEHRSSIAAPFIFFIVIGFQFLAKWLEHLKKRGSNSQVEMELRKSIKQLLKEAS 60
          ME E ++E R  +AAP  F +V+ FQ L+KWL+ LKK+GS +  E ELR  IKQLL+EAS
Sbjct: 1  MEGEKLIEDRGFLAAPLTFVVVVVFQLLSKWLDQLKKKGSKNTRESELRTEIKQLLREAS 60

Query: 61 TLSQPSTFAQAAKLRRLAAAKEKELA 87
           LSQP+TFAQAAKLRR AA KEKELA
Sbjct: 61 ALSQPATFAQAAKLRRSAATKEKELA 86

The following BLAST results are available for this feature:

BLAST of Cucsat.G13 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q1H5D2	1.0e-21	63.95	Protein GET1 OS=Arabidopsis thaliana OX=3702 GN=GET1 PE=1 SV=1	[more]

BLAST of Cucsat.G13 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004146176.1	1.88e-49	100.00	uncharacterized protein LOC101204142 [Cucumis sativus] >KGN55607.1 hypothetical ...	[more]
XP_008448478.1	1.03e-44	93.10	PREDICTED: uncharacterized protein LOC103490650 [Cucumis melo]	[more]
XP_023007643.1	2.06e-42	91.86	uncharacterized protein LOC111500212 [Cucurbita maxima]	[more]
XP_038904813.1	2.60e-42	89.66	uncharacterized protein LOC120091071 [Benincasa hispida]	[more]
XP_022923433.1	2.76e-42	90.70	uncharacterized protein LOC111431128 [Cucurbita moschata] >KAG6577814.1 Guided e...	[more]

BLAST of Cucsat.G13 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L4T9	9.10e-50	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G002280 PE=3 SV=1	[more]
A0A1S3BKE1	4.97e-45	93.10	uncharacterized protein LOC103490650 OS=Cucumis melo OX=3656 GN=LOC103490650 PE=...	[more]
A0A6J1L884	9.98e-43	91.86	uncharacterized protein LOC111500212 OS=Cucurbita maxima OX=3661 GN=LOC111500212...	[more]
A0A6J1E9M6	1.33e-42	90.70	uncharacterized protein LOC111431128 OS=Cucurbita moschata OX=3662 GN=LOC1114311...	[more]
A0A6J1I7A9	8.33e-41	87.36	uncharacterized protein LOC111470261 OS=Cucurbita maxima OX=3661 GN=LOC111470261...	[more]

BLAST of Cucsat.G13 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G16444.1	7.3e-23	63.95	FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknow...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25

Position :

Zoom :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 124..147
None	No IPR available	PANTHER	PTHR11760:SF44	BNAC07G33680D PROTEIN	coord: 64..209
None	No IPR available	PANTHER	PTHR11760	30S/40S RIBOSOMAL PROTEIN S3	coord: 64..209
IPR028945	Get1 family	PFAM	PF04420	CHD5	coord: 82..197 e-value: 2.7E-9 score: 37.1

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cucsat.G13.T1	Cucsat.G13.T1	mRNA
Cucsat.G13.T2	Cucsat.G13.T2	mRNA
Cucsat.G13.T6	Cucsat.G13.T6	mRNA
Cucsat.G13.T3	Cucsat.G13.T3	mRNA
Cucsat.G13.T7	Cucsat.G13.T7	mRNA
Cucsat.G13.T4	Cucsat.G13.T4	mRNA
Cucsat.G13.T5	Cucsat.G13.T5	mRNA
Cucsat.G13.T8	Cucsat.G13.T8	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0048767	root hair elongation
biological_process	GO:0071816	tail-anchored membrane protein insertion into ER membrane
cellular_component	GO:0005789	endoplasmic reticulum membrane
cellular_component	GO:0043529	GET complex
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0043621	protein self-association