Cucsat.G11119.T6 (mRNA) Cucumber (B10) v3

Overview


Name	Cucsat.G11119.T6
Type	mRNA
Organism	Cucumis sativus L. var. sativus cv B10 (Cucumber (B10) v3)
Description	SWI/SNF complex subunit SWI3A
Location	ctg1740: 599991 .. 602894 (-)
RNA-Seq Expression	Cucsat.G11119.T6
Synteny	Cucsat.G11119.T6

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

CTCTTACATCGCCGTAATACTAAAATCTACGTCGGACTCGACTAAGCTCACCGCGCGGTTCGCGATGGAAGCCTCACTACGGGAACCGAGTTATAGACGAGCTCCAGATGAACCAGACCTCGATCTATACACAATTCCAAGCCACTCCAGTAAGTTTCTCTCTCTTTCTCTATGCATTTTCCCTCCAAACCCTAACCCTAGGACCTCCCCACTTCCTCTGCCATTGAGGATCTTTTGGATACACACGCACTACGTAGCTTAGGGAATTGAATAAAGTACGAAGGGAATTTTTCTTGTTCTATGCGTACAGACACAAGAGTCTTTCTAAACTGGGACTGAATGTTCAACTAATTCTTCAGGTTGGTTTTCGTGGGACGATATTCACGAAACAGAGAAATTAGCTTTGAAGGAGTTTTTTGATGGAAGCTCAATATCAAGAACTCCGCGTATATATAAGGAATATAGAGATTTTATTATCAATAAGTACAGGGAAGAGCCTTCCAGCAGGCTTACATTCACCGAAATTCGGAAATCTCTGGTGGGCGATGTTAACTTGCTTCATAAGGTGTTTGCTTTTTTGGAGACATGGGGGCTGATCAACTTTGGTGCAACTTCTGATGACGATGATTTGGCGGAGGTGGAAGATGGCGAGAGTTCTGTAATTAAGATTGAAGAGGGGGTTCCCAATGGAATTCGTGTGGGAGCAATGCCAAATTCGGTCAAGCCAATTTCAGCACCACCTGTTGTGGAAGACAGTGTGATCGTTAATGGGAGCGGGTTTAAATTACCTCCTTTGACTTCTTATTCAGATGTTTTCGGTGACTTGTTGAAACAGAAGATTTTAGTGTGTGGGAACTGTGGCCAACTTTGTGGATCTAGATACCATCAATGCGCCAAGGTACTTTCTTGTCATCACGCGAATGAATATTCCTAAAGCATCCATTGACAAATCTCAATTGCATCTCTCCACTACTGGATTTTGATGAATGTCTAACTCTACTTTTTAAATATTATACGTAGGATGATTATTCAATCTGCGAAAATTGTTTCAAGGATGGAAAATATGGGGAGAAGAGGCTCTTGGAAGATTTTGAGTTGAAGACCACCGAGTTCACTGAAGATAGAAGCAGTACAGGAGCTGTGTGGACTGAGGCCGAGACTCTGCTTCTTTTGGAATCTGTTTTGAAGCATGGAGATGATTGGGAACTTGTTGCTCAAAATGTTCAAACCAAGACTAAATTGGATTGTATATTGAAGTTCGTAGAGTTGCCGTTTGGGGACTCCTTGTTATGTTCTGAAACTCAAAGGAACGAGGTTAGTGGTCCTAATAACAACGTTACTAGTGAGAAAGAAACTACAGACGGTCCACCAGAAACTACAGAGGCTCCACCTAACAAGCAAGAGATTGCCGGAAGTGAAGACCAATGTACCAAGGACATAAACGAGGACGAAGATGGAGAGAACCAAGGGCCTCCCAAGCGACAATGCACTGCTTCTATTCAAGATACGAGCAGTTCTCTAATGAAACAGGTGGGATTTATGTATTATGTCTTATTATCTACATCTTCAAGTAACTGCATTATTTGTATATAAGTGAAGTGAAATTATTGAGGGTTATCTTTTCTTTGCTGAATGGTGGAGAATAACATATCAATATTGCTCGACTTTGCTCTCCATTAGCTGACCTATAAGCACTTATCCTATGCTATTAGGTAGCTTTGATATCAAGCATGGTCGGACCACAAATTATGGCGGCAGCTTCTACTGCTTCTGTTACAGCACTTTGTGACGAAAACTCATATCCAAAAGAAATATTTGATGATCAAAACTTCTTTGTTACTAATGGACTGTGTTCTGCGGCTTCCACCACATCAAATCACGAGGTTGAGAGGTCTGTATATTTGTTTCTACTTTTCTTGTTTTGGCCAATATTTGATTGACACTGGAGATAACCTTATCTGTAAATTTCTTCAATAGGATTCTCAATAACGAAGATTCAGTCGCTAAGGAAAGGCCTCAATCAGGTACTTATTGTGAACTTGAAAGTGCGGAGTGATTATACGCAGTTTCCCATTTTGTTGGACCATGTTTTCCAATAAAAAAATCTACGTGCGATGCTCTGTTTGAGTATTCTGTCTCTTTGCCCTGCCATAACAAGTAGGATTGTTTGCATTTTTTGGTGTGGGTTCGTGTCATTGCTAGCTCCTTCTCTTGTTTTATTGTACATTATTTTGGCTCGTTACTTTGCCTTACTATCTTCACTTTTCCTTTAGGTGATATAATGGCCGAAGACAAAGATGACATAGCTTTAATCTTACGAGTTAGAGCTGCAATTGCAACAGCACTTGGCGCTGCTGCAGCACATGCAAAATTACTTGCTGATCAAGAAGAGAGAGAAATGGAATATTTATTGGGAATAATGATAGAAACACAGGTAACCATTCTCTGAACTACACATTCCCGATGGTTTGTAGAACAAAACACGAAAGTTGTTGTAAAACATGGTTGATTTTGTGCCAAGTGATAAGTGTCTACTCGTTGTGAAAATGGTTTACAGATGAAGAAGATGCAGCGCAAAATCAAGCATTTTGAAGACCTGGAGCTGATTATGGAAACAGAATATCCTGTGATTGAGGAACTAGAAGATGAACTGTTGATGGAGCGGGTTAGTGTGTTGCAATCTGCATTTGATCTCGGTATACCTAGGTGGAAGGATTATCCTTCTGTGAGATCTTGACATGACATCCATTCTCTTGTACCATTATGATGTATCAAAGAAATTATTTATATCTTAATCTCAATTGAAGATTTGAACCTTCCTTTTAAGAGAGGAAGGCCATATGATACTTTGATCAAGCTTATTGAATTCAAAACATAAGCAAATCCACTGTAGTTTATAGACCA

Coding sequence (CDS)

ATGCCAAATTCGGTCAAGCCAATTTCAGCACCACCTGTTGTGGAAGACAGTGTGATCGTTAATGGGAGCGGGTTTAAATTACCTCCTTTGACTTCTTATTCAGATGTTTTCGGTGACTTGTTGAAACAGAAGATTTTAGTGTGTGGGAACTGTGGCCAACTTTGTGGATCTAGATACCATCAATGCGCCAAGGATGATTATTCAATCTGCGAAAATTGTTTCAAGGATGGAAAATATGGGGAGAAGAGGCTCTTGGAAGATTTTGAGTTGAAGACCACCGAGTTCACTGAAGATAGAAGCAGTACAGGAGCTGTGTGGACTGAGGCCGAGACTCTGCTTCTTTTGGAATCTGTTTTGAAGCATGGAGATGATTGGGAACTTGTTGCTCAAAATGTTCAAACCAAGACTAAATTGGATTGTATATTGAAGTTCGTAGAGTTGCCGTTTGGGGACTCCTTGTTATGTTCTGAAACTCAAAGGAACGAGGTTAGTGGTCCTAATAACAACGTTACTAGTGAGAAAGAAACTACAGACGGTCCACCAGAAACTACAGAGGCTCCACCTAACAAGCAAGAGATTGCCGGAAGTGAAGACCAATGTACCAAGGACATAAACGAGGACGAAGATGGAGAGAACCAAGGGCCTCCCAAGCGACAATGCACTGCTTCTATTCAAGATACGAGCAGTTCTCTAATGAAACAGGTAGCTTTGATATCAAGCATGGTCGGACCACAAATTATGGCGGCAGCTTCTACTGCTTCTGTTACAGCACTTTGTGACGAAAACTCATATCCAAAAGAAATATTTGATGATCAAAACTTCTTTGTTACTAATGGACTGTGTTCTGCGGCTTCCACCACATCAAATCACGAGGTTGAGAGGATTCTCAATAACGAAGATTCAGTCGCTAAGGAAAGGCCTCAATCAGGTGATATAATGGCCGAAGACAAAGATGACATAGCTTTAATCTTACGAGTTAGAGCTGCAATTGCAACAGCACTTGGCGCTGCTGCAGCACATGCAAAATTACTTGCTGATCAAGAAGAGAGAGAAATGGAATATTTATTGGGAATAATGATAGAAACACAGGTAACCATTCTCTGA

Protein sequence

MPNSVKPISAPPVVEDSVIVNGSGFKLPPLTSYSDVFGDLLKQKILVCGNCGQLCGSRYHQCAKDDYSICENCFKDGKYGEKRLLEDFELKTTEFTEDRSSTGAVWTEAETLLLLESVLKHGDDWELVAQNVQTKTKLDCILKFVELPFGDSLLCSETQRNEVSGPNNNVTSEKETTDGPPETTEAPPNKQEIAGSEDQCTKDINEDEDGENQGPPKRQCTASIQDTSSSLMKQVALISSMVGPQIMAAASTASVTALCDENSYPKEIFDDQNFFVTNGLCSAASTTSNHEVERILNNEDSVAKERPQSGDIMAEDKDDIALILRVRAAIATALGAAAAHAKLLADQEEREMEYLLGIMIETQVTIL

Homology

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BLAST of Cucsat.G11119.T6 vs. ExPASy Swiss-Prot
Match: Q8W475 (SWI/SNF complex subunit SWI3A OS=Arabidopsis thaliana OX=3702 GN=SWI3A PE=1 SV=1)

HSP 1 Score: 271.6 bits (693), Expect = 1.3e-71
Identity = 168/364 (46.15%), Postives = 226/364 (62.09%), Query Frame = 0


Query: 2   PNSVKPISAPPVVEDSVIVNGSGFKLPPLTSYSDVFGDLLK-QKILVCGNCGQLCGSRYH 61
           PNS++PI+APP+VE+ V    +G K+PPLTSYSDVF DL K   +LVC +CG+ C S ++
Sbjct: 133 PNSLRPITAPPLVEERV---ETGIKVPPLTSYSDVFSDLKKPDHVLVCAHCGERCDSPFY 192

Query: 62  QCAKDDYSICENCFKDGKYGEKRLLEDFELKTTEFTEDRSSTGAVWTEAETLLLLESVLK 121
           Q  K   +ICE CFK+G YGE    +DF+L         +S  AVWTE E LLLLESVLK
Sbjct: 193 QHNKGIVNICEKCFKNGNYGENNTADDFKL-------IGNSAAAVWTEEEILLLLESVLK 252

Query: 122 HGDDWELVAQNVQTKTKLDCILKFVELPFGDSLLCSETQRNEVSGPNNNVTSEKETTDGP 181
           HGDDWEL++Q+V TK++LDCI K +ELPFG+ L+ S + R   S    +  +E+  TDG 
Sbjct: 253 HGDDWELISQSVSTKSRLDCISKLIELPFGEFLMGSASGRLNPSILTEDENTEQVQTDG- 312

Query: 182 PETTEAPPNKQEIAGSEDQCTKDINEDEDGENQGPPKRQCTASIQDTSSSLMKQVALISS 241
                     QE    E+  T++  ED   E++ P KR+  A I +  SSLMKQVA ++S
Sbjct: 313 ----------QE---HEETETREEKEDRVNEDEPPAKRKRVALISEGDSSLMKQVAAMAS 372

Query: 242 MVGPQIMAAASTASVTALCDENSYPKEIFDDQNFFVTNGLCSAASTTSNHEVERILNNED 301
            VGP +  AA+ A++ ALCDE S PKEIFD  ++             SN  V+R    +D
Sbjct: 373 KVGPSVATAAAKAALAALCDEASCPKEIFDTDDY-------------SNFTVDRANGEKD 432

Query: 302 SVAKERPQSGDIMAEDKDDIALILRVRAAIATALGAAAAHAKLLADQEEREMEYLLGIMI 361
           +  +E+ +  D        + + LR+RA++ATALGAAAA AK+LADQEEREME L   +I
Sbjct: 433 TDMEEQQEEKD----GPQGLPVALRIRASVATALGAAAAQAKILADQEEREMEQLAATVI 455

Query: 362 ETQV 365
           E Q+
Sbjct: 493 EQQL 455

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BLAST of Cucsat.G11119.T6 vs. ExPASy Swiss-Prot
Match: Q0JCC3 (SWI/SNF complex subunit SWI3A homolog OS=Oryza sativa subsp. japonica OX=39947 GN=SWI3A PE=1 SV=1)

HSP 1 Score: 184.1 bits (466), Expect = 2.8e-45
Identity = 126/349 (36.10%), Postives = 193/349 (55.30%), Query Frame = 0


Query: 21  NGSGFKLPPLTSYSDVFGDLLKQKILVCGNCGQLCGSRYHQCAKDDYSICENCFKDGKYG 80
           N +GF+LPPLTSYSDVFG+       +CG CG  C     Q  KD + +C  C+ +    
Sbjct: 166 NENGFRLPPLTSYSDVFGEWAPGMAPICGLCGMECRDGNAQILKDGFKVCSKCYANNDNK 225

Query: 81  EKRLLEDFELKTTEFTEDRSSTGAVWTEAETLLLLESVLKHGDDWELVAQNVQTKTKLDC 140
            +  +   + K  E  ++ SS  + WT+AETLLLLE VLKHGDDW+L+AQ+V+TK K +C
Sbjct: 226 GEANIHPGDKK--ERIDNHSS--SAWTDAETLLLLEGVLKHGDDWDLIAQHVRTKNKSEC 285

Query: 141 ILKFVELPFGDSLLCSETQRNEVSGPNNNVTSEKETTDGPPETTEAPPNKQEIAGSEDQC 200
           I + ++LPFG+ +L        V+G  +N   + +TTDG    +    +  +   + D  
Sbjct: 286 IARLIQLPFGEHML------GTVNGKLDNRLHKIQTTDGKVNKSTVKESSSQPTETVDDM 345

Query: 201 TKDINED--EDGENQGPPKRQCTASIQDTSSSLMKQVALISSMVGPQIMAAASTASVTAL 260
             D NED  +    + P K +   S  D + SLM+Q+A +++   P ++AAA+ A++ AL
Sbjct: 346 QIDGNEDGADKSVEEHPTKHRRLFSSIDITVSLMEQLAHLTTSTSPDVVAAAADAAIKAL 405

Query: 261 CDENSYPKEIFDDQNFFVTNGLCSAASTTSNHEVERILNNEDSVAKERP---QSGDIMAE 320
            +EN   +  F      ++       + +SNH  +    ++D    +R           +
Sbjct: 406 GNENPQARRAFQ-----LSEKEYQTRAFSSNHARQ----SDDVGGGDRDVEMHGHPDKKQ 465

Query: 321 DKDDIALILRVRAAIATALGAAAAHAKLLADQEEREMEYLLGIMIETQV 365
            K  I+   +VRAA+AT++G AAA AK+LADQEEREME L+  +IETQ+
Sbjct: 466 GKMFISTTYQVRAAVATSIGVAAARAKMLADQEEREMELLMASIIETQL 495

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BLAST of Cucsat.G11119.T6 vs. ExPASy Swiss-Prot
Match: Q53KK6 (SWI/SNF complex subunit SWI3C homolog OS=Oryza sativa subsp. japonica OX=39947 GN=SWI3C PE=1 SV=1)

HSP 1 Score: 93.6 bits (231), Expect = 5.0e-18
Identity = 90/321 (28.04%), Postives = 142/321 (44.24%), Query Frame = 0


Query: 48  CGNCGQLCGSRYHQCAKD-DYSICENCFKDGKYGEKRLLEDFELKTTEFTEDRS-STGAV 107
           C  C Q   S ++Q  K+ D ++C +CF D +Y       DF+    +   DRS + G  
Sbjct: 360 CSYCLQPLTSLHYQSLKEADIALCSDCFHDARYITGHSSLDFQ--RIDGDNDRSENDGDS 419

Query: 108 WTEAETLLLLESVLKHGDDWELVAQNVQTKTKLDCILKFVELPFGDSLLCSETQRNEVSG 167
           WT+ ETLLLLE + K+ D+W  +A++V TK+K  CI  F+ LP  D LL        +  
Sbjct: 420 WTDQETLLLLEGIEKYNDNWNNIAEHVGTKSKAQCIYHFIRLPVEDGLL------ENIEV 479

Query: 168 PNNNVTSEKETTDGPPETTEAPPNKQEIAGSEDQCTKDINEDEDGE--NQGPPKRQCTAS 227
           P+ +V    ET   P                      D N    G    + PP  Q    
Sbjct: 480 PDASVPFRAETNGYP--------------------HLDCNGSTSGNLPQKIPPDNQ--LP 539

Query: 228 IQDTSSSLMKQVALISSMVGPQIMAAASTASVTALCDENSYPKEIFDDQNFFVTNGLCSA 287
             ++S+ +M  V  ++S +GP++ A+ ++A+++ L           DD +   + G+CS 
Sbjct: 540 FINSSNPVMSLVGFLASAMGPRVAASCASAALSVL---------TVDDDSRVNSEGICSD 599

Query: 288 ASTTSNHEVERILNNEDSVAKERPQSGDIMAEDKDDIALILRVRAAIATALGAAAAHAKL 347
           +     H               R  +G + +    +     +V+ A    L AAA  AKL
Sbjct: 600 SRGQGPH------------PNFRDHNGGVSSSISPE-----KVKHAAMCGLSAAATKAKL 624

Query: 348 LADQEEREMEYLLGIMIETQV 365
            ADQEERE++ L   +I  Q+
Sbjct: 660 FADQEEREIQRLTATVINHQL 624

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BLAST of Cucsat.G11119.T6 vs. ExPASy Swiss-Prot
Match: Q84JG2 (SWI/SNF complex subunit SWI3B OS=Arabidopsis thaliana OX=3702 GN=SWI3B PE=1 SV=1)

HSP 1 Score: 87.4 bits (215), Expect = 3.6e-16
Identity = 69/247 (27.94%), Postives = 108/247 (43.72%), Query Frame = 0


Query: 48  CGNCGQLCGSRYHQCAKDDYSICENCFKDGKYGEKRLLEDFELKTTEFTEDRSSTGAVWT 107
           C  C  +C      C K D ++C  C+    Y  +  +   E K  E +E+       W+
Sbjct: 175 CNGCKAICSIACFACDKYDLTLCARCYVRSNY--RVGINSSEFKRVEISEESKPE---WS 234

Query: 108 EAETLLLLESVLKHGDDWELVAQNVQTKTKLDCILKFVELPFGDSLLCSETQRNEVSGPN 167
           + E LLLLE+V+ +GDDW+ VA +V  +T+ DC+ +FV+LPFG+  +             
Sbjct: 235 DKEILLLLEAVMHYGDDWKKVASHVIGRTEKDCVSQFVKLPFGEQFV------------- 294

Query: 168 NNVTSEKETTDGPPETTEAPPNKQEIAGSEDQCTKDINEDE--DGENQGPPKRQCTASIQ 227
                E ++ DG             +   +     DI E E  D +   P KR     + 
Sbjct: 295 ----KESDSEDG-------------LEMFDQIKDSDIPESEGIDKDGSSPNKRIKLTPLA 354

Query: 228 DTSSSLMKQVALISSMVGPQIMAAASTASVTALCD-ENSYPKEIFDDQNFFVTNGLCSAA 287
           D S+ +M Q A +S++ G  +  AA+ A+V AL D +    K    D N    N   S  
Sbjct: 355 DASNPIMAQAAFLSALAGTNVAEAAARAAVRALSDVDYEADKNASRDPNRQDANAASSGE 386

Query: 288 STTSNHE 292
           +T +  E
Sbjct: 415 TTRNESE 386

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BLAST of Cucsat.G11119.T6 vs. ExPASy Swiss-Prot
Match: Q9XI07 (SWI/SNF complex subunit SWI3C OS=Arabidopsis thaliana OX=3702 GN=SWI3C PE=1 SV=1)

HSP 1 Score: 85.9 bits (211), Expect = 1.0e-15
Identity = 90/319 (28.21%), Postives = 143/319 (44.83%), Query Frame = 0


Query: 48  CGNCGQLCGSRYHQC-AKDDYSICENCFKDGKYGEKRLLEDF-ELKTTEFTEDRSSTGAV 107
           C +C +   + Y Q   K D  +C +CF  G++       DF  +   +F  D+   G  
Sbjct: 345 CNHCSRPLPTVYFQSQKKGDILLCCDCFHHGRFVVGHSCLDFVRVDPMKFYGDQD--GDN 404

Query: 108 WTEAETLLLLESVLKHGDDWELVAQNVQTKTKLDCILKFVELPFGDSLLCSETQRNEVSG 167
           WT+ ETLLLLE+V  + ++W  +A +V +K+K  CIL F+ LP  D LL       EVSG
Sbjct: 405 WTDQETLLLLEAVELYNENWVQIADHVGSKSKAQCILHFLRLPVEDGLL----DNVEVSG 464

Query: 168 PNNNVTSEKETTDGPPETTEAPPNKQEIAGSEDQCTKDINEDEDGENQGPPKRQCTASIQ 227
             N               TE P N  +  G+      D N D  G ++     +      
Sbjct: 465 VTN---------------TENPTNGYDHKGT------DSNGDLPGYSEQGSDTEIKLPFV 524

Query: 228 DTSSSLMKQVALISSMVGPQIMAAASTASVTALCDENSYPKEIFDDQNFFVTNGLCSAAS 287
            + + +M  VA ++S VGP++ A+ +  S++ L +++    E    +   + +G      
Sbjct: 525 KSPNPVMALVAFLASAVGPRVAASCAHESLSVLSEDDRMKSEGMQGKEASLLDG------ 584

Query: 288 TTSNHEVERILNNEDSVAKERPQSGDIMAEDKDDIALILRVRAAIATALGAAAAHAKLLA 347
              N +       +D   K   Q+G   AE +  +    +V AA    L AAA  AKL A
Sbjct: 585 --ENQQ-------QDGAHKTSSQNG---AEAQTPLPQD-KVMAAFRAGLSAAATKAKLFA 617

Query: 348 DQEEREMEYLLGIMIETQV 365
           D EERE++ L   ++  Q+
Sbjct: 645 DHEEREIQRLSANIVNHQL 617

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BLAST of Cucsat.G11119.T6 vs. NCBI nr
Match: XP_004138253.1 (SWI/SNF complex subunit SWI3A [Cucumis sativus] >KGN63467.1 hypothetical protein Csa_014143 [Cucumis sativus])

HSP 1 Score: 709 bits (1829), Expect = 6.32e-254
Identity = 363/364 (99.73%), Postives = 364/364 (100.00%), Query Frame = 0


Query: 1   MPNSVKPISAPPVVEDSVIVNGSGFKLPPLTSYSDVFGDLLKQKILVCGNCGQLCGSRYH 60
           MPNSVKPISAPPVVEDSVIVNGSGFKLPPLTSYSDVFGDLLKQKILVCGNCGQLCGSRYH
Sbjct: 145 MPNSVKPISAPPVVEDSVIVNGSGFKLPPLTSYSDVFGDLLKQKILVCGNCGQLCGSRYH 204

Query: 61  QCAKDDYSICENCFKDGKYGEKRLLEDFELKTTEFTEDRSSTGAVWTEAETLLLLESVLK 120
           QCAKDDYSICENCFKDGKYGEKRLLEDFELKTTEFTEDRSSTGAVWTEAETLLLLESVLK
Sbjct: 205 QCAKDDYSICENCFKDGKYGEKRLLEDFELKTTEFTEDRSSTGAVWTEAETLLLLESVLK 264

Query: 121 HGDDWELVAQNVQTKTKLDCILKFVELPFGDSLLCSETQRNEVSGPNNNVTSEKETTDGP 180
           HGDDWELVAQNVQTKTKLDCILKFVELPFGDSLLCSETQRNEVSGPNNNVTSEKETTDGP
Sbjct: 265 HGDDWELVAQNVQTKTKLDCILKFVELPFGDSLLCSETQRNEVSGPNNNVTSEKETTDGP 324

Query: 181 PETTEAPPNKQEIAGSEDQCTKDINEDEDGENQGPPKRQCTASIQDTSSSLMKQVALISS 240
           PETTEAPPNKQEIAGSEDQCTKDINEDEDGENQGPPKRQCTASIQDTSSSLMKQVALISS
Sbjct: 325 PETTEAPPNKQEIAGSEDQCTKDINEDEDGENQGPPKRQCTASIQDTSSSLMKQVALISS 384

Query: 241 MVGPQIMAAASTASVTALCDENSYPKEIFDDQNFFVTNGLCSAASTTSNHEVERILNNED 300
           MVGPQIMAAASTASVTALCDENSYPKEIFDDQNFFVTNGLCSAASTTSNHEVERILNNED
Sbjct: 385 MVGPQIMAAASTASVTALCDENSYPKEIFDDQNFFVTNGLCSAASTTSNHEVERILNNED 444

Query: 301 SVAKERPQSGDIMAEDKDDIALILRVRAAIATALGAAAAHAKLLADQEEREMEYLLGIMI 360
           SVAKERPQSGDIMAEDKDDIALILRVRAAIATALGAAAAHAKLLADQEEREMEYLLGIMI
Sbjct: 445 SVAKERPQSGDIMAEDKDDIALILRVRAAIATALGAAAAHAKLLADQEEREMEYLLGIMI 504

Query: 361 ETQV 364
           ETQ+
Sbjct: 505 ETQM 508

[Close]

BLAST of Cucsat.G11119.T6 vs. NCBI nr
Match: KAA0057757.1 (SWI/SNF complex subunit SWI3A isoform X2 [Cucumis melo var. makuwa])

HSP 1 Score: 682 bits (1760), Expect = 1.23e-244
Identity = 349/364 (95.88%), Postives = 355/364 (97.53%), Query Frame = 0


Query: 1   MPNSVKPISAPPVVEDSVIVNGSGFKLPPLTSYSDVFGDLLKQKILVCGNCGQLCGSRYH 60
           MPNSVKPISAPPVVED+VIVNG GFKLPPLTSYSDVF DLLKQKILVCGNCGQLCGSRYH
Sbjct: 68  MPNSVKPISAPPVVEDNVIVNGRGFKLPPLTSYSDVFSDLLKQKILVCGNCGQLCGSRYH 127

Query: 61  QCAKDDYSICENCFKDGKYGEKRLLEDFELKTTEFTEDRSSTGAVWTEAETLLLLESVLK 120
           QCAKDDY ICENCFKDGKYGE+RLLEDFELKTTE TEDRSSTGAVWTEAETLLLLESVLK
Sbjct: 128 QCAKDDYLICENCFKDGKYGEQRLLEDFELKTTESTEDRSSTGAVWTEAETLLLLESVLK 187

Query: 121 HGDDWELVAQNVQTKTKLDCILKFVELPFGDSLLCSETQRNEVSGPNNNVTSEKETTDGP 180
           HGDDWELVAQNVQTKTKLDCILKFVELPFGDSLLCSE QRNEVSGPNNNVTSEKETTDGP
Sbjct: 188 HGDDWELVAQNVQTKTKLDCILKFVELPFGDSLLCSEAQRNEVSGPNNNVTSEKETTDGP 247

Query: 181 PETTEAPPNKQEIAGSEDQCTKDINEDEDGENQGPPKRQCTASIQDTSSSLMKQVALISS 240
           PETTEAPP+ QEIAGSEDQCTKDINEDEDGENQGPPKRQCTAS+QDTSSSLMKQVALISS
Sbjct: 248 PETTEAPPSNQEIAGSEDQCTKDINEDEDGENQGPPKRQCTASLQDTSSSLMKQVALISS 307

Query: 241 MVGPQIMAAASTASVTALCDENSYPKEIFDDQNFFVTNGLCSAASTTSNHEVERILNNED 300
           MVGPQIMAAA+TASVTALCDENSYPKEIFDDQNFFV NGLCSAASTTSNHEVERILNNED
Sbjct: 308 MVGPQIMAAAATASVTALCDENSYPKEIFDDQNFFVPNGLCSAASTTSNHEVERILNNED 367

Query: 301 SVAKERPQSGDIMAEDKDDIALILRVRAAIATALGAAAAHAKLLADQEEREMEYLLGIMI 360
           SVAKERPQSGDIMAEDKDDI LILRVRAAIATALGAAAAHAKLLADQEEREMEYLL IMI
Sbjct: 368 SVAKERPQSGDIMAEDKDDIPLILRVRAAIATALGAAAAHAKLLADQEEREMEYLLAIMI 427

Query: 361 ETQV 364
           ETQ+
Sbjct: 428 ETQM 431

[Close]

BLAST of Cucsat.G11119.T6 vs. NCBI nr
Match: TYJ98437.1 (SWI/SNF complex subunit SWI3A isoform X2 [Cucumis melo var. makuwa])

HSP 1 Score: 679 bits (1751), Expect = 2.53e-242
Identity = 348/364 (95.60%), Postives = 354/364 (97.25%), Query Frame = 0


Query: 1   MPNSVKPISAPPVVEDSVIVNGSGFKLPPLTSYSDVFGDLLKQKILVCGNCGQLCGSRYH 60
           MPNSVKPISAPPVVED+VIVNG GFKLPPLTSYSDVF DLLKQKILVCGNCGQLCGSRYH
Sbjct: 128 MPNSVKPISAPPVVEDNVIVNGRGFKLPPLTSYSDVFSDLLKQKILVCGNCGQLCGSRYH 187

Query: 61  QCAKDDYSICENCFKDGKYGEKRLLEDFELKTTEFTEDRSSTGAVWTEAETLLLLESVLK 120
           QCAKDDY ICENCFKDGKYGE+RLLEDFELKTTE TEDRSSTGAVWTEAETLLLLESVLK
Sbjct: 188 QCAKDDYLICENCFKDGKYGEQRLLEDFELKTTESTEDRSSTGAVWTEAETLLLLESVLK 247

Query: 121 HGDDWELVAQNVQTKTKLDCILKFVELPFGDSLLCSETQRNEVSGPNNNVTSEKETTDGP 180
           HGDDWELVAQNVQTKTKLDCILKFVELPFGDSLLCSE QRNEVSGPNNNVTSEKETTDGP
Sbjct: 248 HGDDWELVAQNVQTKTKLDCILKFVELPFGDSLLCSEAQRNEVSGPNNNVTSEKETTDGP 307

Query: 181 PETTEAPPNKQEIAGSEDQCTKDINEDEDGENQGPPKRQCTASIQDTSSSLMKQVALISS 240
           PETTEAPP+ QEIAGSEDQCTKDINEDEDGENQGPPKRQCTAS+QDTSSSLMKQVALISS
Sbjct: 308 PETTEAPPSNQEIAGSEDQCTKDINEDEDGENQGPPKRQCTASLQDTSSSLMKQVALISS 367

Query: 241 MVGPQIMAAASTASVTALCDENSYPKEIFDDQNFFVTNGLCSAASTTSNHEVERILNNED 300
           MVGPQIMAAA+TASVTALCDENSYPKEIFDDQ FFV NGLCSAASTTSNHEVERILNNED
Sbjct: 368 MVGPQIMAAAATASVTALCDENSYPKEIFDDQIFFVPNGLCSAASTTSNHEVERILNNED 427

Query: 301 SVAKERPQSGDIMAEDKDDIALILRVRAAIATALGAAAAHAKLLADQEEREMEYLLGIMI 360
           SVAKERPQSGDIMAEDKDDI LILRVRAAIATALGAAAAHAKLLADQEEREMEYLL IMI
Sbjct: 428 SVAKERPQSGDIMAEDKDDIPLILRVRAAIATALGAAAAHAKLLADQEEREMEYLLAIMI 487

Query: 361 ETQV 364
           ETQ+
Sbjct: 488 ETQM 491

[Close]

BLAST of Cucsat.G11119.T6 vs. NCBI nr
Match: XP_016903195.1 (PREDICTED: SWI/SNF complex subunit SWI3A [Cucumis melo])

HSP 1 Score: 635 bits (1638), Expect = 7.33e-225
Identity = 332/368 (90.22%), Postives = 340/368 (92.39%), Query Frame = 0


Query: 1   MPNSVKPISAPPVVEDSVIVNGSGFKLPPLTSYSDVFGDLLKQKILVCGNCGQLCGSRYH 60
           MPNSVKPISAPPVVED+VIVNG GFKLPPLTSYSDVF DLLKQKILVCGNCGQLCGSRYH
Sbjct: 145 MPNSVKPISAPPVVEDNVIVNGRGFKLPPLTSYSDVFSDLLKQKILVCGNCGQLCGSRYH 204

Query: 61  QCAKDDYSICENCFKDGKYGEKRLLEDFELKTTEFTEDRSSTGAVWTEAETLLLLESVLK 120
           QCAKDDY ICENCFKDGKYGE+RLLEDFELKTTE TEDRSSTGAVWTEAETLLLLESVLK
Sbjct: 205 QCAKDDYLICENCFKDGKYGEQRLLEDFELKTTESTEDRSSTGAVWTEAETLLLLESVLK 264

Query: 121 HGDDWELVAQNVQTKTKLDCILKFVELPFGDSLLCSETQRNEVSGPNNNVTSEKETTDGP 180
           HGDDWELVAQNVQTKTKLDCILKFVELPFGDSLLCSE QRNEVSGPNNNVTSEKETTDGP
Sbjct: 265 HGDDWELVAQNVQTKTKLDCILKFVELPFGDSLLCSEAQRNEVSGPNNNVTSEKETTDGP 324

Query: 181 PETTEAPPNKQEIAGSEDQCTKDINEDEDGENQGPPKRQCTASIQDTSSSLMKQVALISS 240
           PETTEAPP+ QEIAGSEDQCTKDINEDEDGENQGPPKRQCTAS+QDTSSSLMKQVALISS
Sbjct: 325 PETTEAPPSNQEIAGSEDQCTKDINEDEDGENQGPPKRQCTASLQDTSSSLMKQVALISS 384

Query: 241 MVGPQIMAAASTASVTALCDENSYPKEIFDDQNFFVTNGLCSAASTTSNHEVER----IL 300
           MVGPQIMAAA+TASVTALCDENSYPKEIFDDQ F     L         H++ R    IL
Sbjct: 385 MVGPQIMAAAATASVTALCDENSYPKEIFDDQIFLF---LMDCVLRLPPHQITRLRGLIL 444

Query: 301 NNEDSVAKERPQSGDIMAEDKDDIALILRVRAAIATALGAAAAHAKLLADQEEREMEYLL 360
           NNEDSVAKERPQSGDIMAEDKDDI LILRVRAAIATALGAAAAHAKLLADQEEREMEYLL
Sbjct: 445 NNEDSVAKERPQSGDIMAEDKDDIPLILRVRAAIATALGAAAAHAKLLADQEEREMEYLL 504

Query: 361 GIMIETQV 364
            IMIETQ+
Sbjct: 505 AIMIETQM 509

[Close]

BLAST of Cucsat.G11119.T6 vs. NCBI nr
Match: XP_038880615.1 (SWI/SNF complex subunit SWI3A [Benincasa hispida])

HSP 1 Score: 605 bits (1559), Expect = 5.62e-213
Identity = 311/364 (85.44%), Postives = 326/364 (89.56%), Query Frame = 0


Query: 1   MPNSVKPISAPPVVEDSVIVNGSGFKLPPLTSYSDVFGDLLKQKILVCGNCGQLCGSRYH 60
           MPNSVKPISAPP+VEDS IVNGSGFKLPPLTSYSDVF +LLKQKILVCGNCGQ CGSRYH
Sbjct: 145 MPNSVKPISAPPIVEDSAIVNGSGFKLPPLTSYSDVFSELLKQKILVCGNCGQHCGSRYH 204

Query: 61  QCAKDDYSICENCFKDGKYGEKRLLEDFELKTTEFTEDRSSTGAVWTEAETLLLLESVLK 120
           QCAKD Y +CENCFKDG YGE+RLLEDFELKT EF ED  + GAVWTEAETLLLLESVLK
Sbjct: 205 QCAKDGYLVCENCFKDGNYGEQRLLEDFELKTNEFIEDSGNIGAVWTEAETLLLLESVLK 264

Query: 121 HGDDWELVAQNVQTKTKLDCILKFVELPFGDSLLCSETQRNEVSGPNNNVTSEKETTDGP 180
           HGDDW+LVAQNVQTKTK+DCILK VELPFGDSLLCS+  R+EVS PNNNV SEKE TD  
Sbjct: 265 HGDDWDLVAQNVQTKTKVDCILKLVELPFGDSLLCSDAPRSEVSDPNNNVASEKEITD-- 324

Query: 181 PETTEAPPNKQEIAGSEDQCTKDINEDEDGENQGPPKRQCTASIQDTSSSLMKQVALISS 240
                 PPN QEIAGSEDQCTK+INEDED ENQGPPKRQCT S+ DTSSSLMKQVALISS
Sbjct: 325 -----PPPNNQEIAGSEDQCTKNINEDEDEENQGPPKRQCTGSVPDTSSSLMKQVALISS 384

Query: 241 MVGPQIMAAASTASVTALCDENSYPKEIFDDQNFFVTNGLCSAASTTSNHEVERILNNED 300
           MVGP IMAAA+TASVTALCDEN YPKEIFDDQ FFV NG CSAASTTSNHE ERILNNED
Sbjct: 385 MVGPHIMAAAATASVTALCDENLYPKEIFDDQEFFVPNGSCSAASTTSNHEDERILNNED 444

Query: 301 SVAKERPQSGDIMAEDKDDIALILRVRAAIATALGAAAAHAKLLADQEEREMEYLLGIMI 360
           SVAKERPQSGDIMA+DKDDI LILRVR AIATALGAAAAHAKLLADQEERE+EYLL IMI
Sbjct: 445 SVAKERPQSGDIMAQDKDDIPLILRVRTAIATALGAAAAHAKLLADQEEREIEYLLAIMI 501

Query: 361 ETQV 364
           ETQ+
Sbjct: 505 ETQI 501

[Close]

BLAST of Cucsat.G11119.T6 vs. ExPASy TrEMBL
Match: A0A0A0LRQ6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G001390 PE=4 SV=1)

HSP 1 Score: 709 bits (1829), Expect = 3.06e-254
Identity = 363/364 (99.73%), Postives = 364/364 (100.00%), Query Frame = 0


Query: 1   MPNSVKPISAPPVVEDSVIVNGSGFKLPPLTSYSDVFGDLLKQKILVCGNCGQLCGSRYH 60
           MPNSVKPISAPPVVEDSVIVNGSGFKLPPLTSYSDVFGDLLKQKILVCGNCGQLCGSRYH
Sbjct: 145 MPNSVKPISAPPVVEDSVIVNGSGFKLPPLTSYSDVFGDLLKQKILVCGNCGQLCGSRYH 204

Query: 61  QCAKDDYSICENCFKDGKYGEKRLLEDFELKTTEFTEDRSSTGAVWTEAETLLLLESVLK 120
           QCAKDDYSICENCFKDGKYGEKRLLEDFELKTTEFTEDRSSTGAVWTEAETLLLLESVLK
Sbjct: 205 QCAKDDYSICENCFKDGKYGEKRLLEDFELKTTEFTEDRSSTGAVWTEAETLLLLESVLK 264

Query: 121 HGDDWELVAQNVQTKTKLDCILKFVELPFGDSLLCSETQRNEVSGPNNNVTSEKETTDGP 180
           HGDDWELVAQNVQTKTKLDCILKFVELPFGDSLLCSETQRNEVSGPNNNVTSEKETTDGP
Sbjct: 265 HGDDWELVAQNVQTKTKLDCILKFVELPFGDSLLCSETQRNEVSGPNNNVTSEKETTDGP 324

Query: 181 PETTEAPPNKQEIAGSEDQCTKDINEDEDGENQGPPKRQCTASIQDTSSSLMKQVALISS 240
           PETTEAPPNKQEIAGSEDQCTKDINEDEDGENQGPPKRQCTASIQDTSSSLMKQVALISS
Sbjct: 325 PETTEAPPNKQEIAGSEDQCTKDINEDEDGENQGPPKRQCTASIQDTSSSLMKQVALISS 384

Query: 241 MVGPQIMAAASTASVTALCDENSYPKEIFDDQNFFVTNGLCSAASTTSNHEVERILNNED 300
           MVGPQIMAAASTASVTALCDENSYPKEIFDDQNFFVTNGLCSAASTTSNHEVERILNNED
Sbjct: 385 MVGPQIMAAASTASVTALCDENSYPKEIFDDQNFFVTNGLCSAASTTSNHEVERILNNED 444

Query: 301 SVAKERPQSGDIMAEDKDDIALILRVRAAIATALGAAAAHAKLLADQEEREMEYLLGIMI 360
           SVAKERPQSGDIMAEDKDDIALILRVRAAIATALGAAAAHAKLLADQEEREMEYLLGIMI
Sbjct: 445 SVAKERPQSGDIMAEDKDDIALILRVRAAIATALGAAAAHAKLLADQEEREMEYLLGIMI 504

Query: 361 ETQV 364
           ETQ+
Sbjct: 505 ETQM 508

[Close]

BLAST of Cucsat.G11119.T6 vs. ExPASy TrEMBL
Match: A0A5A7UST4 (SWI/SNF complex subunit SWI3A isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold274G00390 PE=4 SV=1)

HSP 1 Score: 682 bits (1760), Expect = 5.96e-245
Identity = 349/364 (95.88%), Postives = 355/364 (97.53%), Query Frame = 0


Query: 1   MPNSVKPISAPPVVEDSVIVNGSGFKLPPLTSYSDVFGDLLKQKILVCGNCGQLCGSRYH 60
           MPNSVKPISAPPVVED+VIVNG GFKLPPLTSYSDVF DLLKQKILVCGNCGQLCGSRYH
Sbjct: 68  MPNSVKPISAPPVVEDNVIVNGRGFKLPPLTSYSDVFSDLLKQKILVCGNCGQLCGSRYH 127

Query: 61  QCAKDDYSICENCFKDGKYGEKRLLEDFELKTTEFTEDRSSTGAVWTEAETLLLLESVLK 120
           QCAKDDY ICENCFKDGKYGE+RLLEDFELKTTE TEDRSSTGAVWTEAETLLLLESVLK
Sbjct: 128 QCAKDDYLICENCFKDGKYGEQRLLEDFELKTTESTEDRSSTGAVWTEAETLLLLESVLK 187

Query: 121 HGDDWELVAQNVQTKTKLDCILKFVELPFGDSLLCSETQRNEVSGPNNNVTSEKETTDGP 180
           HGDDWELVAQNVQTKTKLDCILKFVELPFGDSLLCSE QRNEVSGPNNNVTSEKETTDGP
Sbjct: 188 HGDDWELVAQNVQTKTKLDCILKFVELPFGDSLLCSEAQRNEVSGPNNNVTSEKETTDGP 247

Query: 181 PETTEAPPNKQEIAGSEDQCTKDINEDEDGENQGPPKRQCTASIQDTSSSLMKQVALISS 240
           PETTEAPP+ QEIAGSEDQCTKDINEDEDGENQGPPKRQCTAS+QDTSSSLMKQVALISS
Sbjct: 248 PETTEAPPSNQEIAGSEDQCTKDINEDEDGENQGPPKRQCTASLQDTSSSLMKQVALISS 307

Query: 241 MVGPQIMAAASTASVTALCDENSYPKEIFDDQNFFVTNGLCSAASTTSNHEVERILNNED 300
           MVGPQIMAAA+TASVTALCDENSYPKEIFDDQNFFV NGLCSAASTTSNHEVERILNNED
Sbjct: 308 MVGPQIMAAAATASVTALCDENSYPKEIFDDQNFFVPNGLCSAASTTSNHEVERILNNED 367

Query: 301 SVAKERPQSGDIMAEDKDDIALILRVRAAIATALGAAAAHAKLLADQEEREMEYLLGIMI 360
           SVAKERPQSGDIMAEDKDDI LILRVRAAIATALGAAAAHAKLLADQEEREMEYLL IMI
Sbjct: 368 SVAKERPQSGDIMAEDKDDIPLILRVRAAIATALGAAAAHAKLLADQEEREMEYLLAIMI 427

Query: 361 ETQV 364
           ETQ+
Sbjct: 428 ETQM 431

[Close]

BLAST of Cucsat.G11119.T6 vs. ExPASy TrEMBL
Match: A0A5D3BH37 (SWI/SNF complex subunit SWI3A isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold350G00380 PE=4 SV=1)

HSP 1 Score: 679 bits (1751), Expect = 1.22e-242
Identity = 348/364 (95.60%), Postives = 354/364 (97.25%), Query Frame = 0


Query: 1   MPNSVKPISAPPVVEDSVIVNGSGFKLPPLTSYSDVFGDLLKQKILVCGNCGQLCGSRYH 60
           MPNSVKPISAPPVVED+VIVNG GFKLPPLTSYSDVF DLLKQKILVCGNCGQLCGSRYH
Sbjct: 128 MPNSVKPISAPPVVEDNVIVNGRGFKLPPLTSYSDVFSDLLKQKILVCGNCGQLCGSRYH 187

Query: 61  QCAKDDYSICENCFKDGKYGEKRLLEDFELKTTEFTEDRSSTGAVWTEAETLLLLESVLK 120
           QCAKDDY ICENCFKDGKYGE+RLLEDFELKTTE TEDRSSTGAVWTEAETLLLLESVLK
Sbjct: 188 QCAKDDYLICENCFKDGKYGEQRLLEDFELKTTESTEDRSSTGAVWTEAETLLLLESVLK 247

Query: 121 HGDDWELVAQNVQTKTKLDCILKFVELPFGDSLLCSETQRNEVSGPNNNVTSEKETTDGP 180
           HGDDWELVAQNVQTKTKLDCILKFVELPFGDSLLCSE QRNEVSGPNNNVTSEKETTDGP
Sbjct: 248 HGDDWELVAQNVQTKTKLDCILKFVELPFGDSLLCSEAQRNEVSGPNNNVTSEKETTDGP 307

Query: 181 PETTEAPPNKQEIAGSEDQCTKDINEDEDGENQGPPKRQCTASIQDTSSSLMKQVALISS 240
           PETTEAPP+ QEIAGSEDQCTKDINEDEDGENQGPPKRQCTAS+QDTSSSLMKQVALISS
Sbjct: 308 PETTEAPPSNQEIAGSEDQCTKDINEDEDGENQGPPKRQCTASLQDTSSSLMKQVALISS 367

Query: 241 MVGPQIMAAASTASVTALCDENSYPKEIFDDQNFFVTNGLCSAASTTSNHEVERILNNED 300
           MVGPQIMAAA+TASVTALCDENSYPKEIFDDQ FFV NGLCSAASTTSNHEVERILNNED
Sbjct: 368 MVGPQIMAAAATASVTALCDENSYPKEIFDDQIFFVPNGLCSAASTTSNHEVERILNNED 427

Query: 301 SVAKERPQSGDIMAEDKDDIALILRVRAAIATALGAAAAHAKLLADQEEREMEYLLGIMI 360
           SVAKERPQSGDIMAEDKDDI LILRVRAAIATALGAAAAHAKLLADQEEREMEYLL IMI
Sbjct: 428 SVAKERPQSGDIMAEDKDDIPLILRVRAAIATALGAAAAHAKLLADQEEREMEYLLAIMI 487

Query: 361 ETQV 364
           ETQ+
Sbjct: 488 ETQM 491

[Close]

BLAST of Cucsat.G11119.T6 vs. ExPASy TrEMBL
Match: A0A1S4E5E5 (SWI/SNF complex subunit SWI3A OS=Cucumis melo OX=3656 GN=LOC103502303 PE=4 SV=1)

HSP 1 Score: 635 bits (1638), Expect = 3.55e-225
Identity = 332/368 (90.22%), Postives = 340/368 (92.39%), Query Frame = 0


Query: 1   MPNSVKPISAPPVVEDSVIVNGSGFKLPPLTSYSDVFGDLLKQKILVCGNCGQLCGSRYH 60
           MPNSVKPISAPPVVED+VIVNG GFKLPPLTSYSDVF DLLKQKILVCGNCGQLCGSRYH
Sbjct: 145 MPNSVKPISAPPVVEDNVIVNGRGFKLPPLTSYSDVFSDLLKQKILVCGNCGQLCGSRYH 204

Query: 61  QCAKDDYSICENCFKDGKYGEKRLLEDFELKTTEFTEDRSSTGAVWTEAETLLLLESVLK 120
           QCAKDDY ICENCFKDGKYGE+RLLEDFELKTTE TEDRSSTGAVWTEAETLLLLESVLK
Sbjct: 205 QCAKDDYLICENCFKDGKYGEQRLLEDFELKTTESTEDRSSTGAVWTEAETLLLLESVLK 264

Query: 121 HGDDWELVAQNVQTKTKLDCILKFVELPFGDSLLCSETQRNEVSGPNNNVTSEKETTDGP 180
           HGDDWELVAQNVQTKTKLDCILKFVELPFGDSLLCSE QRNEVSGPNNNVTSEKETTDGP
Sbjct: 265 HGDDWELVAQNVQTKTKLDCILKFVELPFGDSLLCSEAQRNEVSGPNNNVTSEKETTDGP 324

Query: 181 PETTEAPPNKQEIAGSEDQCTKDINEDEDGENQGPPKRQCTASIQDTSSSLMKQVALISS 240
           PETTEAPP+ QEIAGSEDQCTKDINEDEDGENQGPPKRQCTAS+QDTSSSLMKQVALISS
Sbjct: 325 PETTEAPPSNQEIAGSEDQCTKDINEDEDGENQGPPKRQCTASLQDTSSSLMKQVALISS 384

Query: 241 MVGPQIMAAASTASVTALCDENSYPKEIFDDQNFFVTNGLCSAASTTSNHEVER----IL 300
           MVGPQIMAAA+TASVTALCDENSYPKEIFDDQ F     L         H++ R    IL
Sbjct: 385 MVGPQIMAAAATASVTALCDENSYPKEIFDDQIFLF---LMDCVLRLPPHQITRLRGLIL 444

Query: 301 NNEDSVAKERPQSGDIMAEDKDDIALILRVRAAIATALGAAAAHAKLLADQEEREMEYLL 360
           NNEDSVAKERPQSGDIMAEDKDDI LILRVRAAIATALGAAAAHAKLLADQEEREMEYLL
Sbjct: 445 NNEDSVAKERPQSGDIMAEDKDDIPLILRVRAAIATALGAAAAHAKLLADQEEREMEYLL 504

Query: 361 GIMIETQV 364
            IMIETQ+
Sbjct: 505 AIMIETQM 509

[Close]

BLAST of Cucsat.G11119.T6 vs. ExPASy TrEMBL
Match: A0A6J1E1N8 (SWI/SNF complex subunit SWI3A isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111430023 PE=4 SV=1)

HSP 1 Score: 562 bits (1449), Expect = 1.29e-196
Identity = 299/365 (81.92%), Postives = 315/365 (86.30%), Query Frame = 0


Query: 1   MPNSVKPISAPPVVEDSVIVNGSGFKLPPLTSYSDVFGDLLKQKILVCGNCGQLCGSRYH 60
           MPNSVKPISAPPVVEDS IVNGSGFK PPLTSYSDVF DLLK KILVCGNCGQ CGSRYH
Sbjct: 145 MPNSVKPISAPPVVEDSSIVNGSGFKSPPLTSYSDVFTDLLKLKILVCGNCGQSCGSRYH 204

Query: 61  QCAKDDYSICENCFKDGKYGEKRLLEDFELKTTEFTEDRSSTGAVWTEAETLLLLESVLK 120
           QCAKD Y ICENCF D  YGE+RLLEDFELKT EF ED  +TGAVWTEAETLLLLES LK
Sbjct: 205 QCAKDGYLICENCFNDKNYGEQRLLEDFELKTKEFIEDSVNTGAVWTEAETLLLLESFLK 264

Query: 121 HGDDWELVAQNVQTKTKLDCILKFVELPFGDSLLCSETQRNEVSGPNNNVTSEKETTDGP 180
           HGDDWELVAQNV+TKTKLDCILK VELPFGD LL SE QRNE  GPNNNVTSEKE     
Sbjct: 265 HGDDWELVAQNVKTKTKLDCILKLVELPFGDFLLRSEAQRNEARGPNNNVTSEKEI---- 324

Query: 181 PETTEAPPNKQEIAGSEDQCTKDINEDEDGENQGPPKRQCTASIQDTSSSLMKQVALISS 240
                +P N QE+AGSEDQ   DINED+D ENQGPPKRQCTAS+ DTSSSLMKQVALISS
Sbjct: 325 ---RLSPSNNQEVAGSEDQ---DINEDKDEENQGPPKRQCTASVPDTSSSLMKQVALISS 384

Query: 241 MVGPQIMAAASTASVTALCDENSYPKEIFDDQNFFVTNGLCSAASTTSNHEVERILNNED 300
           MVGP IMAAA+TASV ALCDEN YPKE+FDDQ+FFV NGLCSAAST SNHEVERIL+N+D
Sbjct: 385 MVGPHIMAAAATASVAALCDENLYPKEVFDDQDFFVPNGLCSAASTESNHEVERILDNDD 444

Query: 301 SVAKE-RPQSGDIMAEDKDDIALILRVRAAIATALGAAAAHAKLLADQEEREMEYLLGIM 360
           SV KE RPQ GD+M EDKDDI LILR+RAA ATALGAAAAHAKLLADQEERE+EYLL IM
Sbjct: 445 SVPKEERPQPGDMMVEDKDDIPLILRIRAATATALGAAAAHAKLLADQEEREIEYLLAIM 499

Query: 361 IETQV 364
           IETQ+
Sbjct: 505 IETQM 499

The following BLAST results are available for this feature:

BLAST of Cucsat.G11119.T6 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8W475	1.3e-71	46.15	SWI/SNF complex subunit SWI3A OS=Arabidopsis thaliana OX=3702 GN=SWI3A PE=1 SV=1	[more]
Q0JCC3	2.8e-45	36.10	SWI/SNF complex subunit SWI3A homolog OS=Oryza sativa subsp. japonica OX=39947 G...	[more]
Q53KK6	5.0e-18	28.04	SWI/SNF complex subunit SWI3C homolog OS=Oryza sativa subsp. japonica OX=39947 G...	[more]
Q84JG2	3.6e-16	27.94	SWI/SNF complex subunit SWI3B OS=Arabidopsis thaliana OX=3702 GN=SWI3B PE=1 SV=1	[more]
Q9XI07	1.0e-15	28.21	SWI/SNF complex subunit SWI3C OS=Arabidopsis thaliana OX=3702 GN=SWI3C PE=1 SV=1	[more]

BLAST of Cucsat.G11119.T6 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004138253.1	6.32e-254	99.73	SWI/SNF complex subunit SWI3A [Cucumis sativus] >KGN63467.1 hypothetical protein...	[more]
KAA0057757.1	1.23e-244	95.88	SWI/SNF complex subunit SWI3A isoform X2 [Cucumis melo var. makuwa]	[more]
TYJ98437.1	2.53e-242	95.60	SWI/SNF complex subunit SWI3A isoform X2 [Cucumis melo var. makuwa]	[more]
XP_016903195.1	7.33e-225	90.22	PREDICTED: SWI/SNF complex subunit SWI3A [Cucumis melo]	[more]
XP_038880615.1	5.62e-213	85.44	SWI/SNF complex subunit SWI3A [Benincasa hispida]	[more]

BLAST of Cucsat.G11119.T6 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LRQ6	3.06e-254	99.73	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G001390 PE=4 SV=1	[more]
A0A5A7UST4	5.96e-245	95.88	SWI/SNF complex subunit SWI3A isoform X2 OS=Cucumis melo var. makuwa OX=1194695 ...	[more]
A0A5D3BH37	1.22e-242	95.60	SWI/SNF complex subunit SWI3A isoform X2 OS=Cucumis melo var. makuwa OX=1194695 ...	[more]
A0A1S4E5E5	3.55e-225	90.22	SWI/SNF complex subunit SWI3A OS=Cucumis melo OX=3656 GN=LOC103502303 PE=4 SV=1	[more]
A0A6J1E1N8	1.29e-196	81.92	SWI/SNF complex subunit SWI3A isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001005	SANT/Myb domain	SMART	SM00717	sant	coord: 102..150 e-value: 1.8E-8 score: 44.1
IPR001005	SANT/Myb domain	PROSITE	PS50090	MYB_LIKE	coord: 106..148 score: 6.44629
IPR001005	SANT/Myb domain	CDD	cd00167	SANT	coord: 106..147 e-value: 1.7968E-8 score: 47.9554
IPR017930	Myb domain	PFAM	PF00249	Myb_DNA-binding	coord: 106..145 e-value: 2.4E-10 score: 40.4
None	No IPR available	GENE3D	1.10.10.60		coord: 101..152 e-value: 5.4E-12 score: 47.2
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 196..214
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 159..222
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 159..177
None	No IPR available	PANTHER	PTHR12802	SWI/SNF COMPLEX-RELATED	coord: 74..364
None	No IPR available	PANTHER	PTHR12802:SF41	BRAHMA ASSOCIATED PROTEIN 155 KDA	coord: 74..364
IPR017884	SANT domain	PROSITE	PS51293	SANT	coord: 101..152 score: 18.795305
IPR009057	Homeobox-like domain superfamily	SUPERFAMILY	46689	Homeodomain-like	coord: 100..151

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Cucsat.G11119	Cucsat.G11119	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cucsat.G11119.T6.E1	Cucsat.G11119.T6.E1	exon
Cucsat.G11119.T6.E2	Cucsat.G11119.T6.E2	exon
Cucsat.G11119.T6.E3	Cucsat.G11119.T6.E3	exon
Cucsat.G11119.T6.E4	Cucsat.G11119.T6.E4	exon
Cucsat.G11119.T6.E5	Cucsat.G11119.T6.E5	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cucsat.G11119.T6.C5	Cucsat.G11119.T6.C5	CDS
Cucsat.G11119.T6.C4	Cucsat.G11119.T6.C4	CDS
Cucsat.G11119.T6.C3	Cucsat.G11119.T6.C3	CDS
Cucsat.G11119.T6.C2	Cucsat.G11119.T6.C2	CDS
Cucsat.G11119.T6.C1	Cucsat.G11119.T6.C1	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Cucsat.G11119.T6	Cucsat.G11119.T6-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0043229	intracellular organelle
molecular_function	GO:0005515	protein binding