Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonfive_prime_UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ACTTATACCTGACATGACAAAGATGACGAGCAACAAATACTTAAGCTCAATTAGCATCAAGCCCGGTTGACATACACTCTTTTTCTACCAAGTTATACTCGATCCACCCAAATGCCTCACTGGGTGATGGGCCATAGGCTCTAAATTCTATTTGTAACATCTTTTTACTTCCCTTTACTGTCAAATTTCTATCAATTCAATCCATTCCTTTCAAATTGAATTTAAATCTTGATTTTGATTCATTATGTTCTTTGTACTCTCACATCGCTCCCTTTTGATTTAAAACTTTAGATTCACTTTTATATTCAAAATAGATTCTTAAGTGAATCATACTTCATTATGGTAAACCCCAAATATTGGGTATTTAGTTTAGTCACTACGTGGCAAAATTATGGGCCTAGTGGACACAAATGATTGCGTGTCCCTGCCTTGCAGAATGCAGTCAATAGTCAACTATAGTAATCATCTCATCTTGTAACAACATCCAATCACAACCGTCCAAATTCTAATGAGTGCTCTTTGAATCAGCACTTGGAAAACTCATAACTTAATATGGTACACGTGGCGTCTGGGTCCCATTTTTTTACCCCTCTACAAGTCGTGGATGTCATCATACACAACCACTACTCCTTCCTTCCGTGGGCGTTCCATTCGTCCACATCAGCCAGAGATGTGATTTCCTCCTCCACGTCCCATTTTCCTAATTTTGCTTTCTAGCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTCTCGTTTCTTTTTGTTTCTTAGCTGAGTTATAGAGCTATTCTGCAGTGACCCTTTTCTGGTTTGGGGTTTTGGAGCTCTGAAATTGTACTGCTTGTAGATTGCATTGGTTTTTAGGGTGAGTTCTTTTCTTTTTGAATTCTGGGTTTGCTTCTTCTTAGTGGTTATTCAATGGGGCCGCCACTTTTGCAGCATTGAATCTTTGGGTATCAGCTGGATAGTGATTTTGCTACCCTTTTCTATATTTATTCTTGATTTGGGTATCAATGAATCTTTGGGTATCAGCTGGGTGTTCCTGCATAGTTTATTTTTCTGGGTTTTCTGTGTTGTCTTCCTTAATGGAAGATTTCGTCCTTGTTTTCGATGATGGACTCCCAAACAAGATCTGGGTTTCTAAAATTTTTTTTTACTGATTGTGTATTCGATTGTTTGAATTTGCTGAAACAATGGCTGTAAAATTGGGTTTTGATTTAACATAGGAATAGTAATGTTTGAAAACGTTGAAGAAACTGCCAAAGTTTTGGACATGTTTTCAACTTTTCGTATGAAACAATGATTCATTTCTCTTTTGAAGGATTCTTCGTCGTATTTATGCTGACATGAAGTTTTCCTCTTCTGGGTTCTTTTTTTTTTTCCCTTCTCAATAGAATGACGTCTTGAATCCGTGAAGAAGATGGTAAAAAATGAGTTCAGAGTAAGCGTGATTATGAAGAGACATCATGTTCATCATTTCGTGAAGCTTTATCAAGTTCTTTAGCCATTGCCAGTCGATTTCTCAGCCCACCAGCAATGACAGAGAGCTCGGAGCAGCACCTTGTAATCAAACCCCACTTTCAGAACTCTGTTCAAAAAGCTCAAAAACCAATCCAAAATGGCAAAGGCCACCCGAATCTCGAACACCAAAACANCCCATATGGTGCA
mRNA sequence
ACTTATACCTGACATGACAAAGATGACGAGCAACAAATACTTAAGCTCAATTAGCATCAAGCCCGCCATTGCCAGTCGATTTCTCAGCCCACCAGCAATGACAGAGAGCTCGGAGCAGCACCTTGTAATCAAACCCCACTTTCAGAACTCTGTTCAAAAAGCTCAAAAACCAATCCAAAATGGCAAAGGCCACCCGAATCTCGAACACCAAAACANCCCATATGGTGCA
Coding sequence (CDS)
ATGACAAAGATGACGAGCAACAAATACTTAAGCTCAATTAGCATCAAGCCCGCCATTGCCAGTCGATTTCTCAGCCCACCAGCAATGACAGAGAGCTCGGAGCAGCACCTTGTAATCAAACCCCACTTTCAGAACTCTGTTCAAAAAGCTCAAAAACCAATCCAAAATGGCAAAGGCCACCCGAATCTCGAACACCAAAACANCCCATATGGTGCA
Protein sequence
MTKMTSNKYLSSISIKPAIASRFLSPPAMTESSEQHLVIKPHFQNSVQKAQKPIQNGKGHPNLEHQNXPYGA
Homology
BLAST of Cp4.1LG08g03900 vs. NCBI nr
Match:
KAG6597411.1 (Protein argonaute 10, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 82.4 bits (202), Expect = 3.18e-16
Identity = 38/39 (97.44%), Postives = 39/39 (100.00%), Query Frame = 0
Query: 29 MTESSEQHLVIKPHFQNSVQKAQKPIQNGKGHPNLEHQN 67
MTESSEQHLV+KPHFQNSVQKAQKPIQNGKGHPNLEHQN
Sbjct: 1 MTESSEQHLVVKPHFQNSVQKAQKPIQNGKGHPNLEHQN 39
BLAST of Cp4.1LG08g03900 vs. NCBI nr
Match:
KAG7028869.1 (Protein argonaute 10, partial [Cucurbita argyrosperma subsp. argyrosperma])
HSP 1 Score: 80.1 bits (196), Expect = 2.07e-15
Identity = 37/39 (94.87%), Postives = 38/39 (97.44%), Query Frame = 0
Query: 29 MTESSEQHLVIKPHFQNSVQKAQKPIQNGKGHPNLEHQN 67
MTESSEQHLV+ PHFQNSVQKAQKPIQNGKGHPNLEHQN
Sbjct: 1 MTESSEQHLVVTPHFQNSVQKAQKPIQNGKGHPNLEHQN 39
BLAST of Cp4.1LG08g03900 vs. NCBI nr
Match:
XP_022947595.1 (protein argonaute 10-like [Cucurbita moschata] >XP_022947603.1 protein argonaute 10-like [Cucurbita moschata])
HSP 1 Score: 78.6 bits (192), Expect = 7.19e-15
Identity = 37/38 (97.37%), Postives = 37/38 (97.37%), Query Frame = 0
Query: 29 MTESSEQHLVIKPHFQNSVQKAQKPIQNGKGHPNLEHQ 66
MTESSEQH VIKPHFQNSVQKAQKPIQNGKGHPNLEHQ
Sbjct: 1 MTESSEQHRVIKPHFQNSVQKAQKPIQNGKGHPNLEHQ 38
BLAST of Cp4.1LG08g03900 vs. NCBI nr
Match:
XP_022975433.1 (protein argonaute 10-like [Cucurbita maxima])
HSP 1 Score: 76.6 bits (187), Expect = 3.42e-14
Identity = 37/39 (94.87%), Postives = 37/39 (94.87%), Query Frame = 0
Query: 29 MTESSEQHLVIKPHFQNSVQKAQKPIQNGKGHPNLEHQN 67
MTESSEQ LVIKPHFQNSVQKAQKPIQNGKG PNLEHQN
Sbjct: 1 MTESSEQQLVIKPHFQNSVQKAQKPIQNGKGQPNLEHQN 39
BLAST of Cp4.1LG08g03900 vs. NCBI nr
Match:
XP_022974445.1 (protein argonaute 10-like [Cucurbita maxima])
HSP 1 Score: 76.6 bits (187), Expect = 3.42e-14
Identity = 37/39 (94.87%), Postives = 37/39 (94.87%), Query Frame = 0
Query: 29 MTESSEQHLVIKPHFQNSVQKAQKPIQNGKGHPNLEHQN 67
MTESSEQ LVIKPHFQNSVQKAQKPIQNGKG PNLEHQN
Sbjct: 1 MTESSEQQLVIKPHFQNSVQKAQKPIQNGKGQPNLEHQN 39
BLAST of Cp4.1LG08g03900 vs. ExPASy TrEMBL
Match:
A0A6J1G729 (protein argonaute 10-like OS=Cucurbita moschata OX=3662 GN=LOC111451413 PE=3 SV=1)
HSP 1 Score: 78.6 bits (192), Expect = 3.48e-15
Identity = 37/38 (97.37%), Postives = 37/38 (97.37%), Query Frame = 0
Query: 29 MTESSEQHLVIKPHFQNSVQKAQKPIQNGKGHPNLEHQ 66
MTESSEQH VIKPHFQNSVQKAQKPIQNGKGHPNLEHQ
Sbjct: 1 MTESSEQHRVIKPHFQNSVQKAQKPIQNGKGHPNLEHQ 38
BLAST of Cp4.1LG08g03900 vs. ExPASy TrEMBL
Match:
A0A6J1IJ66 (protein argonaute 10-like OS=Cucurbita maxima OX=3661 GN=LOC111474751 PE=3 SV=1)
HSP 1 Score: 76.6 bits (187), Expect = 1.66e-14
Identity = 37/39 (94.87%), Postives = 37/39 (94.87%), Query Frame = 0
Query: 29 MTESSEQHLVIKPHFQNSVQKAQKPIQNGKGHPNLEHQN 67
MTESSEQ LVIKPHFQNSVQKAQKPIQNGKG PNLEHQN
Sbjct: 1 MTESSEQQLVIKPHFQNSVQKAQKPIQNGKGQPNLEHQN 39
BLAST of Cp4.1LG08g03900 vs. ExPASy TrEMBL
Match:
A0A6J1IDZ4 (protein argonaute 10-like OS=Cucurbita maxima OX=3661 GN=LOC111473106 PE=3 SV=1)
HSP 1 Score: 76.6 bits (187), Expect = 1.66e-14
Identity = 37/39 (94.87%), Postives = 37/39 (94.87%), Query Frame = 0
Query: 29 MTESSEQHLVIKPHFQNSVQKAQKPIQNGKGHPNLEHQN 67
MTESSEQ LVIKPHFQNSVQKAQKPIQNGKG PNLEHQN
Sbjct: 1 MTESSEQQLVIKPHFQNSVQKAQKPIQNGKGQPNLEHQN 39
BLAST of Cp4.1LG08g03900 vs. ExPASy TrEMBL
Match:
A0A6J1GX34 (protein argonaute 10-like OS=Cucurbita moschata OX=3662 GN=LOC111457947 PE=3 SV=1)
HSP 1 Score: 64.3 bits (155), Expect = 3.61e-10
Identity = 32/39 (82.05%), Postives = 32/39 (82.05%), Query Frame = 0
Query: 29 MTESSEQHLVIKPHFQNSVQKAQKPIQNGKGHPNLEHQN 67
M ESSEQHLVIK H QNSVQK QK QNGKG PNLEHQN
Sbjct: 6 MKESSEQHLVIKTHLQNSVQKPQKATQNGKGPPNLEHQN 44
BLAST of Cp4.1LG08g03900 vs. ExPASy TrEMBL
Match:
A0A1S3AWX3 (protein argonaute 10 OS=Cucumis melo OX=3656 GN=LOC103483666 PE=3 SV=1)
HSP 1 Score: 62.8 bits (151), Expect = 1.26e-09
Identity = 31/39 (79.49%), Postives = 32/39 (82.05%), Query Frame = 0
Query: 29 MTESSEQHLVIKPHFQNSVQKAQKPIQNGKGHPNLEHQN 67
M ESSEQHLVIK H QN+VQKA K QNGKG PNLEHQN
Sbjct: 6 MKESSEQHLVIKTHLQNTVQKAPKSTQNGKGPPNLEHQN 44
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
KAG6597411.1 | 3.18e-16 | 97.44 | Protein argonaute 10, partial [Cucurbita argyrosperma subsp. sororia] | [more] |
KAG7028869.1 | 2.07e-15 | 94.87 | Protein argonaute 10, partial [Cucurbita argyrosperma subsp. argyrosperma] | [more] |
XP_022947595.1 | 7.19e-15 | 97.37 | protein argonaute 10-like [Cucurbita moschata] >XP_022947603.1 protein argonaute... | [more] |
XP_022975433.1 | 3.42e-14 | 94.87 | protein argonaute 10-like [Cucurbita maxima] | [more] |
XP_022974445.1 | 3.42e-14 | 94.87 | protein argonaute 10-like [Cucurbita maxima] | [more] |
Match Name | E-value | Identity | Description | |
A0A6J1G729 | 3.48e-15 | 97.37 | protein argonaute 10-like OS=Cucurbita moschata OX=3662 GN=LOC111451413 PE=3 SV=... | [more] |
A0A6J1IJ66 | 1.66e-14 | 94.87 | protein argonaute 10-like OS=Cucurbita maxima OX=3661 GN=LOC111474751 PE=3 SV=1 | [more] |
A0A6J1IDZ4 | 1.66e-14 | 94.87 | protein argonaute 10-like OS=Cucurbita maxima OX=3661 GN=LOC111473106 PE=3 SV=1 | [more] |
A0A6J1GX34 | 3.61e-10 | 82.05 | protein argonaute 10-like OS=Cucurbita moschata OX=3662 GN=LOC111457947 PE=3 SV=... | [more] |
A0A1S3AWX3 | 1.26e-09 | 79.49 | protein argonaute 10 OS=Cucumis melo OX=3656 GN=LOC103483666 PE=3 SV=1 | [more] |
Match Name | E-value | Identity | Description | |