CsGy6G004847 (gene) Cucumber (Gy14) v2.1

Overview
NameCsGy6G004847
Typegene
OrganismCucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
DescriptionUnknown protein
LocationGy14Chr6: 4481210 .. 4481616 (+)
RNA-Seq ExpressionCsGy6G004847
SyntenyCsGy6G004847
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGACTGCATATGGATGCTGCAGCAAAGAGTGGCAAGGAAAATGTAACTTTGCACTGAACTATACTAATTCCTCTTCTTCCAACCTGTTAGTGTATAAACAGTAAACATGAATCCAAAACTGTCAACTTCAAGACCAAAAAGGCTCTAAATAAAGATATATCCATAAGAACATTTTCTTTCATTAGAATATAAGAATACTAACAGTTGTTTCCTAAGCAATAATCCCTGGAGCGGGCGAGCCAACTCAAGCGCTTCAAGTAGCAGTATTCTATCAGAATTACAGATCGTCGAGATTTGCACAGATATGCTGGAAATAACATGGGATGATGAAGAAATGTGCTTGAAGGATCAGTATACACAAGAGGGAAAAACAACCTCCGAGTCAGAGATGTTGCAACTTCTCTAA

mRNA sequence

ATGACTGCATATGGATGCTGCAGCAAAGAGTGGCAAGGAAAATGTAACTTTGCACTGAACTATACTAATTCCTCTTCTTCCAACCTTTGTTTCCTAAGCAATAATCCCTGGAGCGGGCGAGCCAACTCAAGCGCTTCAAGTAGCAGTATTCTATCAGAATTACAGATCGTCGAGATTTGCACAGATATGCTGGAAATAACATGGGATGATGAAGAAATGTGCTTGAAGGATCAGTATACACAAGAGGGAAAAACAACCTCCGAGTCAGAGATGTTGCAACTTCTCTAA

Coding sequence (CDS)

ATGACTGCATATGGATGCTGCAGCAAAGAGTGGCAAGGAAAATGTAACTTTGCACTGAACTATACTAATTCCTCTTCTTCCAACCTTTGTTTCCTAAGCAATAATCCCTGGAGCGGGCGAGCCAACTCAAGCGCTTCAAGTAGCAGTATTCTATCAGAATTACAGATCGTCGAGATTTGCACAGATATGCTGGAAATAACATGGGATGATGAAGAAATGTGCTTGAAGGATCAGTATACACAAGAGGGAAAAACAACCTCCGAGTCAGAGATGTTGCAACTTCTCTAA

Protein sequence

MTAYGCCSKEWQGKCNFALNYTNSSSSNLCFLSNNPWSGRANSSASSSSILSELQIVEICTDMLEITWDDEEMCLKDQYTQEGKTTSESEMLQLL*
Homology
[Close]
BLAST of CsGy6G004847 vs. NCBI nr
Match: KGN46143.1 (hypothetical protein Csa_005463 [Cucumis sativus])

HSP 1 Score: 189 bits (481), Expect = 1.37e-60
Identity = 95/95 (100.00%), Postives = 95/95 (100.00%), Query Frame = 0 

Query: 1  MTAYGCCSKEWQGKCNFALNYTNSSSSNLCFLSNNPWSGRANSSASSSSILSELQIVEIC 60
          MTAYGCCSKEWQGKCNFALNYTNSSSSNLCFLSNNPWSGRANSSASSSSILSELQIVEIC
Sbjct: 1  MTAYGCCSKEWQGKCNFALNYTNSSSSNLCFLSNNPWSGRANSSASSSSILSELQIVEIC 60

Query: 61 TDMLEITWDDEEMCLKDQYTQEGKTTSESEMLQLL 95
          TDMLEITWDDEEMCLKDQYTQEGKTTSESEMLQLL
Sbjct: 61 TDMLEITWDDEEMCLKDQYTQEGKTTSESEMLQLL 95

[Close]
BLAST of CsGy6G004847 vs. ExPASy TrEMBL
Match: A0A0A0K9J1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G057090 PE=4 SV=1)

HSP 1 Score: 189 bits (481), Expect = 6.64e-61
Identity = 95/95 (100.00%), Postives = 95/95 (100.00%), Query Frame = 0 

Query: 1  MTAYGCCSKEWQGKCNFALNYTNSSSSNLCFLSNNPWSGRANSSASSSSILSELQIVEIC 60
          MTAYGCCSKEWQGKCNFALNYTNSSSSNLCFLSNNPWSGRANSSASSSSILSELQIVEIC
Sbjct: 1  MTAYGCCSKEWQGKCNFALNYTNSSSSNLCFLSNNPWSGRANSSASSSSILSELQIVEIC 60

Query: 61 TDMLEITWDDEEMCLKDQYTQEGKTTSESEMLQLL 95
          TDMLEITWDDEEMCLKDQYTQEGKTTSESEMLQLL
Sbjct: 61 TDMLEITWDDEEMCLKDQYTQEGKTTSESEMLQLL 95

The following BLAST results are available for this feature:
BLAST of CsGy6G004847 vs.
Match NameE-valueIdentityDescription
BLAST of CsGy6G004847 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN46143.11.37e-60100.00hypothetical protein Csa_005463 [Cucumis sativus][more]
BLAST of CsGy6G004847 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0K9J16.64e-61100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G057090 PE=4 SV=1[more]
BLAST of CsGy6G004847 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsGy6G004847.1CsGy6G004847.1mRNA