CsaV3_4G004450 (gene) Cucumber (Chinese Long) v3

Overview


Name	CsaV3_4G004450
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
Description	Pentatricopeptide repeat-containing protein
Location	chr4: 2789027 .. 2792005 (+)
RNA-Seq Expression	CsaV3_4G004450
Synteny	CsaV3_4G004450

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAGATGCATTCTATTTTCTTGCCAAAAGCGTTCATCGTATCCTCATTTGGTGGAGTATTTTCTGACCATTTGTTGCAACGAGGTTCTAGTAAATGCGACGGCAAGTACATGTTTGATGGTGGCATAGTGAAGTTGTTTAGGAATAATTCCCTAAATTTTGCCAGTAAAGCAGTGGTAGATGATAATTGTATTATTAGCTCAAGGTGGCATGGATGTATAGATGAAGAGGAACTATCGAGTGAGTCGTGCAACCGTTTGATTCGTGACTATTGTAAGGTAGGTGATGTTGATTCTGCTATGTCTCTTCTTGCTCATATGGAGTCTGTAGGTCTTCATGCCACTATGACGTCTTACACTTATTTGATTGAAGCTCTTGGAAACGTTGGTAGAACTTTGGAAGCTGATATCATATTCCAGGAAATGATTAGTTTTGGCTGTAAGCCAAGAACAGTTGTCTGCAATGCACTACTAAGAGGGTTTTTGAGAAAAGGCCTTTTAGATCTTGCGTCTGGGGTTTTTGTATTGATGAGTGATTTAGATATTAAAAAAAATCAAGAAACTTATGAAATTCTCTTGGATTATCATGTCAATGCTGGACGGTTGGAAGATACTTGGTCTATTATTAATGAGATGAAACGAAAAGGTTTTGAGTTGAACTCATTTGTGTATAGTAAAGTTATTGTTATATATCAAAACAATGGCATGTGGAAGAAAGCAGTGGGAATTGTTGATGAAATAAGAAAATCAGGGATTTCTATGGACAAACACATTTACAACAGCATCATAGATACATTTGGGAAATATGGCCACTTGTCTGAGGCCTTAGAAGTGTTCAAAAGAATGCAACAAGATGGGGTAGTGCCTGATATAACAACTTGGAATTCATTGATACAATGGAACTGTAAATCTGGGAACCTTGCTACTGCTCTTGAGTTATTCACTGACATGCAAGAACAGGGGATGCATCCAGATCCTAAGATCTTCATTACTCTAATAAGCTTCTTGGGTGAGCAGGGAAAGTGGGATGTGATCAATCAGAATCTTGATAGTATGAAGCTCAGAGGGCACAAGAATAGTGTCCTAGTTTATGAAATTTTAGTAGATATTTATGGGCAGTATGGTCAATTTCAGGATGCTGAGAAGTGCATATCCGCTCTGAAGTCTGCAGGGCTTCTAGCATCTTGTAGCAATTTTTGCATTATAGCAAACGCTTTTGCTCAACAGGTTGGATGCCCATCTTTACAATTTTTTTTTTTTGAGCTACCAAGGTTGACTGAATTTTCATGGCCCTGCTTTGTTGTCAGTTCTTTGTTCTCTGTGAAGAGAGGCTGCGTGTTTTAAATAGAAAAAGAAATAATGGATCGTGATTACTAATTTATGATAAGGGTTTTTCTTGTATTTTGGTAATCCAATACAGGGGTTGTGTGAAGAGACAGTAAAAGTGCTTCAGCTCATGGAAGCAGAAGGAATTGAACCAAATCTTGTAATGCTGAATGTACTGATCAATGCTTTTGCTGTTGCTGGTAGGCATTCGGAAGCGTTAGCCATTTATCATCATATAATTGAAGTCGTAAGTCTTTATGTTCGGGAATGCAAAACCAGAAGATTTAGTTAAAGCCACATGCAATCTAATTTCATCTTTTCTTTGTGTTATCAAGATAATTCTATGATTCATCCTTCTATTTTTCTTCTTCTTAATTTTGTCATATTTTTCTGAGAAGGGTATCAGTCCTGATGTTATAACCTACACCACCCTTATGAAGGCATTTATTCGTGCAAAGAAGTTTGCTAAGGTGCTTATCTCTTGACCGAGTAAATTTTTGAGCTTGATCCAAACGACCAAACCTTTAGTTTACTAGCCATTTGTCCTTATTAACACTGTTCATGTTGAAATGAGTCTTACATTCTTGTATGAAGTTATTCAATTCTTCTTTGTGAAACCCTGCTGATACCTTCTAAGTTCCATATTTGGCTAGGTCCCTGAAATATATAAAGAAATGGAAAGTGCTGGCTGCACGCCAGATAGGAAGGCCAGAGAGATGTTAAAATCCGTAACAGCTATTCTTGAACAAAGGCATTGTAAGTTCCACCCTTTTTGTACTTGTATTTTGTATTTTCTCAGCCAGAGCAGTCCTTGCAAAATTGTTGTACAATTCTTCACCATCTAGGCAATGGTAAATTTAGAACGTCAAGTCATAATTTGAAAAGTTCATACCTGGAGAGTGGTGCATTATGCGTCCGACAGAAAGATTCTGCTTGCAAATATTGCATTGTGTCAGGCTACAAGTTTTATTACAAGTATATTGCTACCTATTCCATAATCGGTGGCTTAGATAATTTATGTCATTTGTCAAGTCAAGTTATGTCAACCTGTAAAGACATACAAATTTTTGTCTTGTTGGCAATTATGAAGAAGGATCAAAGGAATAAAAAAAGAGGTACAGGACGGCATATTCCAAATGGTAAATGCTCATTGGAGCCCCACATCTAAATAGACACCAAAAATATGGTCTTAGGGACTAGGGCTTTTTAGGGGTTGGATTTGTAATTGATTAAAAAAAATCACGTAAAAATATTTTTTAAGCACTTAGTTGGTCATTTCAAACATGGCTAGATCGGTGGTCTTACTAGTGAATTAAGTTTTGATGCAGCTGAGTGAACGACCAAAGTGGGAGTAAATTTTCCGGTGCCTTTATTTTGCAAATGATGAATACTGTAATCTACTTTAGATCTTTCAATAAGAACCCAAGGAGAGCATAACCAGCCCCCTAGTAGTTTATATTATATGCCCTCTCCCAGCCTTCCGATTAACTCGTGGTTTGGGAATAAAATCATTGGTTAAAAAACATTGTTTCTTATACCTACGGTCACATTTCTTTGTGTGTGTGTTTTAATTAGAGAAAGACAGCAACTGATACTTGCTAGTGTGGAGTTCTTGAATGTTTGGATCTTTTTCTTTGAAAAACAGACAGATAA

mRNA sequence

ATGAAGATGCATTCTATTTTCTTGCCAAAAGCGTTCATCGTATCCTCATTTGGTGGAGTATTTTCTGACCATTTGTTGCAACGAGGTTCTAGTAAATGCGACGGCAAGTACATGTTTGATGGTGGCATAGTGAAGTTGTTTAGGAATAATTCCCTAAATTTTGCCAGTAAAGCAGTGGTAGATGATAATTGTATTATTAGCTCAAGGTGGCATGGATGTATAGATGAAGAGGAACTATCGAGTGAGTCGTGCAACCGTTTGATTCGTGACTATTGTAAGGTAGGTGATGTTGATTCTGCTATGTCTCTTCTTGCTCATATGGAGTCTGTAGGTCTTCATGCCACTATGACGTCTTACACTTATTTGATTGAAGCTCTTGGAAACGTTGGTAGAACTTTGGAAGCTGATATCATATTCCAGGAAATGATTAGTTTTGGCTGTAAGCCAAGAACAGTTGTCTGCAATGCACTACTAAGAGGGTTTTTGAGAAAAGGCCTTTTAGATCTTGCGTCTGGGGTTTTTGTATTGATGAGTGATTTAGATATTAAAAAAAATCAAGAAACTTATGAAATTCTCTTGGATTATCATGTCAATGCTGGACGGTTGGAAGATACTTGGTCTATTATTAATGAGATGAAACGAAAAGGTTTTGAGTTGAACTCATTTGTGTATAGTAAAGTTATTGTTATATATCAAAACAATGGCATGTGGAAGAAAGCAGTGGGAATTGTTGATGAAATAAGAAAATCAGGGATTTCTATGGACAAACACATTTACAACAGCATCATAGATACATTTGGGAAATATGGCCACTTGTCTGAGGCCTTAGAAGTGTTCAAAAGAATGCAACAAGATGGGGTAGTGCCTGATATAACAACTTGGAATTCATTGATACAATGGAACTGTAAATCTGGGAACCTTGCTACTGCTCTTGAGTTATTCACTGACATGCAAGAACAGGGGATGCATCCAGATCCTAAGATCTTCATTACTCTAATAAGCTTCTTGGGTGAGCAGGGAAAGTGGGATGTGATCAATCAGAATCTTGATAGTATGAAGCTCAGAGGGCACAAGAATAGTGTCCTAGTTTATGAAATTTTAGTAGATATTTATGGGCAGTATGGTCAATTTCAGGATGCTGAGAAGTGCATATCCGCTCTGAAGTCTGCAGGGCTTCTAGCATCTTGTAGCAATTTTTGCATTATAGCAAACGCTTTTGCTCAACAGGGGTTGTGTGAAGAGACAGTAAAAGTGCTTCAGCTCATGGAAGCAGAAGGAATTGAACCAAATCTTGTAATGCTGAATGTACTGATCAATGCTTTTGCTGTTGCTGGTAGGCATTCGGAAGCGTTAGCCATTTATCATCATATAATTGAAGTCGGTATCAGTCCTGATGTTATAACCTACACCACCCTTATGAAGGCATTTATTCGTGCAAAGAAGTTTGCTAAGGTCCCTGAAATATATAAAGAAATGGAAAGTGCTGGCTGCACGCCAGATAGGAAGGCCAGAGAGATGTTAAAATCCGTAACAGCTATTCTTGAACAAAGGCATTACAGATAA

Coding sequence (CDS)

ATGAAGATGCATTCTATTTTCTTGCCAAAAGCGTTCATCGTATCCTCATTTGGTGGAGTATTTTCTGACCATTTGTTGCAACGAGGTTCTAGTAAATGCGACGGCAAGTACATGTTTGATGGTGGCATAGTGAAGTTGTTTAGGAATAATTCCCTAAATTTTGCCAGTAAAGCAGTGGTAGATGATAATTGTATTATTAGCTCAAGGTGGCATGGATGTATAGATGAAGAGGAACTATCGAGTGAGTCGTGCAACCGTTTGATTCGTGACTATTGTAAGGTAGGTGATGTTGATTCTGCTATGTCTCTTCTTGCTCATATGGAGTCTGTAGGTCTTCATGCCACTATGACGTCTTACACTTATTTGATTGAAGCTCTTGGAAACGTTGGTAGAACTTTGGAAGCTGATATCATATTCCAGGAAATGATTAGTTTTGGCTGTAAGCCAAGAACAGTTGTCTGCAATGCACTACTAAGAGGGTTTTTGAGAAAAGGCCTTTTAGATCTTGCGTCTGGGGTTTTTGTATTGATGAGTGATTTAGATATTAAAAAAAATCAAGAAACTTATGAAATTCTCTTGGATTATCATGTCAATGCTGGACGGTTGGAAGATACTTGGTCTATTATTAATGAGATGAAACGAAAAGGTTTTGAGTTGAACTCATTTGTGTATAGTAAAGTTATTGTTATATATCAAAACAATGGCATGTGGAAGAAAGCAGTGGGAATTGTTGATGAAATAAGAAAATCAGGGATTTCTATGGACAAACACATTTACAACAGCATCATAGATACATTTGGGAAATATGGCCACTTGTCTGAGGCCTTAGAAGTGTTCAAAAGAATGCAACAAGATGGGGTAGTGCCTGATATAACAACTTGGAATTCATTGATACAATGGAACTGTAAATCTGGGAACCTTGCTACTGCTCTTGAGTTATTCACTGACATGCAAGAACAGGGGATGCATCCAGATCCTAAGATCTTCATTACTCTAATAAGCTTCTTGGGTGAGCAGGGAAAGTGGGATGTGATCAATCAGAATCTTGATAGTATGAAGCTCAGAGGGCACAAGAATAGTGTCCTAGTTTATGAAATTTTAGTAGATATTTATGGGCAGTATGGTCAATTTCAGGATGCTGAGAAGTGCATATCCGCTCTGAAGTCTGCAGGGCTTCTAGCATCTTGTAGCAATTTTTGCATTATAGCAAACGCTTTTGCTCAACAGGGGTTGTGTGAAGAGACAGTAAAAGTGCTTCAGCTCATGGAAGCAGAAGGAATTGAACCAAATCTTGTAATGCTGAATGTACTGATCAATGCTTTTGCTGTTGCTGGTAGGCATTCGGAAGCGTTAGCCATTTATCATCATATAATTGAAGTCGGTATCAGTCCTGATGTTATAACCTACACCACCCTTATGAAGGCATTTATTCGTGCAAAGAAGTTTGCTAAGGTCCCTGAAATATATAAAGAAATGGAAAGTGCTGGCTGCACGCCAGATAGGAAGGCCAGAGAGATGTTAAAATCCGTAACAGCTATTCTTGAACAAAGGCATTACAGATAA

Protein sequence

MKMHSIFLPKAFIVSSFGGVFSDHLLQRGSSKCDGKYMFDGGIVKLFRNNSLNFASKAVVDDNCIISSRWHGCIDEEELSSESCNRLIRDYCKVGDVDSAMSLLAHMESVGLHATMTSYTYLIEALGNVGRTLEADIIFQEMISFGCKPRTVVCNALLRGFLRKGLLDLASGVFVLMSDLDIKKNQETYEILLDYHVNAGRLEDTWSIINEMKRKGFELNSFVYSKVIVIYQNNGMWKKAVGIVDEIRKSGISMDKHIYNSIIDTFGKYGHLSEALEVFKRMQQDGVVPDITTWNSLIQWNCKSGNLATALELFTDMQEQGMHPDPKIFITLISFLGEQGKWDVINQNLDSMKLRGHKNSVLVYEILVDIYGQYGQFQDAEKCISALKSAGLLASCSNFCIIANAFAQQGLCEETVKVLQLMEAEGIEPNLVMLNVLINAFAVAGRHSEALAIYHHIIEVGISPDVITYTTLMKAFIRAKKFAKVPEIYKEMESAGCTPDRKAREMLKSVTAILEQRHYR*

Homology

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BLAST of CsaV3_4G004450 vs. NCBI nr
Match: XP_011653107.1 (pentatricopeptide repeat-containing protein At5g42310, chloroplastic isoform X1 [Cucumis sativus] >XP_031739933.1 pentatricopeptide repeat-containing protein At5g42310, chloroplastic isoform X1 [Cucumis sativus] >KGN53191.1 hypothetical protein Csa_014972 [Cucumis sativus])

HSP 1 Score: 1044.3 bits (2699), Expect = 3.6e-301
Identity = 520/520 (100.00%), Postives = 520/520 (100.00%), Query Frame = 0


Query: 1   MKMHSIFLPKAFIVSSFGGVFSDHLLQRGSSKCDGKYMFDGGIVKLFRNNSLNFASKAVV 60
           MKMHSIFLPKAFIVSSFGGVFSDHLLQRGSSKCDGKYMFDGGIVKLFRNNSLNFASKAVV
Sbjct: 1   MKMHSIFLPKAFIVSSFGGVFSDHLLQRGSSKCDGKYMFDGGIVKLFRNNSLNFASKAVV 60

Query: 61  DDNCIISSRWHGCIDEEELSSESCNRLIRDYCKVGDVDSAMSLLAHMESVGLHATMTSYT 120
           DDNCIISSRWHGCIDEEELSSESCNRLIRDYCKVGDVDSAMSLLAHMESVGLHATMTSYT
Sbjct: 61  DDNCIISSRWHGCIDEEELSSESCNRLIRDYCKVGDVDSAMSLLAHMESVGLHATMTSYT 120

Query: 121 YLIEALGNVGRTLEADIIFQEMISFGCKPRTVVCNALLRGFLRKGLLDLASGVFVLMSDL 180
           YLIEALGNVGRTLEADIIFQEMISFGCKPRTVVCNALLRGFLRKGLLDLASGVFVLMSDL
Sbjct: 121 YLIEALGNVGRTLEADIIFQEMISFGCKPRTVVCNALLRGFLRKGLLDLASGVFVLMSDL 180

Query: 181 DIKKNQETYEILLDYHVNAGRLEDTWSIINEMKRKGFELNSFVYSKVIVIYQNNGMWKKA 240
           DIKKNQETYEILLDYHVNAGRLEDTWSIINEMKRKGFELNSFVYSKVIVIYQNNGMWKKA
Sbjct: 181 DIKKNQETYEILLDYHVNAGRLEDTWSIINEMKRKGFELNSFVYSKVIVIYQNNGMWKKA 240

Query: 241 VGIVDEIRKSGISMDKHIYNSIIDTFGKYGHLSEALEVFKRMQQDGVVPDITTWNSLIQW 300
           VGIVDEIRKSGISMDKHIYNSIIDTFGKYGHLSEALEVFKRMQQDGVVPDITTWNSLIQW
Sbjct: 241 VGIVDEIRKSGISMDKHIYNSIIDTFGKYGHLSEALEVFKRMQQDGVVPDITTWNSLIQW 300

Query: 301 NCKSGNLATALELFTDMQEQGMHPDPKIFITLISFLGEQGKWDVINQNLDSMKLRGHKNS 360
           NCKSGNLATALELFTDMQEQGMHPDPKIFITLISFLGEQGKWDVINQNLDSMKLRGHKNS
Sbjct: 301 NCKSGNLATALELFTDMQEQGMHPDPKIFITLISFLGEQGKWDVINQNLDSMKLRGHKNS 360

Query: 361 VLVYEILVDIYGQYGQFQDAEKCISALKSAGLLASCSNFCIIANAFAQQGLCEETVKVLQ 420
           VLVYEILVDIYGQYGQFQDAEKCISALKSAGLLASCSNFCIIANAFAQQGLCEETVKVLQ
Sbjct: 361 VLVYEILVDIYGQYGQFQDAEKCISALKSAGLLASCSNFCIIANAFAQQGLCEETVKVLQ 420

Query: 421 LMEAEGIEPNLVMLNVLINAFAVAGRHSEALAIYHHIIEVGISPDVITYTTLMKAFIRAK 480
           LMEAEGIEPNLVMLNVLINAFAVAGRHSEALAIYHHIIEVGISPDVITYTTLMKAFIRAK
Sbjct: 421 LMEAEGIEPNLVMLNVLINAFAVAGRHSEALAIYHHIIEVGISPDVITYTTLMKAFIRAK 480

Query: 481 KFAKVPEIYKEMESAGCTPDRKAREMLKSVTAILEQRHYR 521
           KFAKVPEIYKEMESAGCTPDRKAREMLKSVTAILEQRHYR
Sbjct: 481 KFAKVPEIYKEMESAGCTPDRKAREMLKSVTAILEQRHYR 520

[Close]

BLAST of CsaV3_4G004450 vs. NCBI nr
Match: KAA0044695.1 (pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa])

HSP 1 Score: 977.6 bits (2526), Expect = 4.1e-281
Identity = 491/518 (94.79%), Postives = 496/518 (95.75%), Query Frame = 0


Query: 1   MKMHSIFLPKAFIVSSFGGVFSDHLLQRGSSKCDGKYMFDGGIVKLFRNNSLNFASKAVV 60
           MKM SIFLPKAFIVSSFGG FSDHLL R SSK DGKY FDG I+K FRNN LN ASKA V
Sbjct: 1   MKMQSIFLPKAFIVSSFGG-FSDHLLHRDSSKFDGKYTFDGAILKFFRNNFLNLASKAAV 60

Query: 61  DDNCIISSRWHGCIDEEELSSESCNRLIRDYCKVGDVDSAMSLLAHMESVGLHATMTSYT 120
           DDNCIISSRWHGCIDEEELSSESCNRLI DYCKVG+VDSAMSLLAHMESVGLHATM SYT
Sbjct: 61  DDNCIISSRWHGCIDEEELSSESCNRLICDYCKVGNVDSAMSLLAHMESVGLHATMASYT 120

Query: 121 YLIEALGNVGRTLEADIIFQEMISFGCKPRTVVCNALLRGFLRKGLLDLASGVFVLMSDL 180
           YLIEALGNVGRTLEADIIFQEMISFGCKPRT+VCNALLRGFLRKGLLDLASGV VLMSDL
Sbjct: 121 YLIEALGNVGRTLEADIIFQEMISFGCKPRTIVCNALLRGFLRKGLLDLASGVLVLMSDL 180

Query: 181 DIKKNQETYEILLDYHVNAGRLEDTWSIINEMKRKGFELNSFVYSKVIVIYQNNGMWKKA 240
           DIKKNQETYEILLDYHVNAGRLEDTWSIINEMKRKGFELNSFVYSKVIVIYQNNGMWKKA
Sbjct: 181 DIKKNQETYEILLDYHVNAGRLEDTWSIINEMKRKGFELNSFVYSKVIVIYQNNGMWKKA 240

Query: 241 VGIVDEIRKSGISMDKHIYNSIIDTFGKYGHLSEALEVFKRMQQDGVVPDITTWNSLIQW 300
           VGIVDEIRKSGISMDKHIYNSIIDTFGKYG LSEALEVFKRMQQD VVPDITTWNSLIQW
Sbjct: 241 VGIVDEIRKSGISMDKHIYNSIIDTFGKYGQLSEALEVFKRMQQDDVVPDITTWNSLIQW 300

Query: 301 NCKSGNLATALELFTDMQEQGMHPDPKIFITLISFLGEQGKWDVINQNLDSMKLRGHKNS 360
           NCK+GNLATALELFTDMQEQGMHPDPKIFITLISFL EQGKWDVI QNLDSMKLRGHKNS
Sbjct: 301 NCKAGNLATALELFTDMQEQGMHPDPKIFITLISFLSEQGKWDVIKQNLDSMKLRGHKNS 360

Query: 361 VLVYEILVDIYGQYGQFQDAEKCISALKSAGLLASCSNFCIIANAFAQQGLCEETVKVLQ 420
           VLVYEILVDIYGQYGQFQD EKCISALKSAGLL S SNFCIIANAFAQQGLCEETVKVLQ
Sbjct: 361 VLVYEILVDIYGQYGQFQDGEKCISALKSAGLLPSSSNFCIIANAFAQQGLCEETVKVLQ 420

Query: 421 LMEAEGIEPNLVMLNVLINAFAVAGRHSEALAIYHHIIEVGISPDVITYTTLMKAFIRAK 480
           LMEAEGIEPNLVMLNVLINAFAVAGRHSEALAIYHHIIEVGISPDVITYTTLMKAFIRAK
Sbjct: 421 LMEAEGIEPNLVMLNVLINAFAVAGRHSEALAIYHHIIEVGISPDVITYTTLMKAFIRAK 480

Query: 481 KFAKVPEIYKEMESAGCTPDRKAREMLKSVTAILEQRH 519
           KFAKVPEIYKEMESAGCTPDRK REMLKSVTA+LEQRH
Sbjct: 481 KFAKVPEIYKEMESAGCTPDRKVREMLKSVTAVLEQRH 517

[Close]

BLAST of CsaV3_4G004450 vs. NCBI nr
Match: XP_016901588.1 (PREDICTED: pentatricopeptide repeat-containing protein At5g42310, mitochondrial-like [Cucumis melo] >XP_016901589.1 PREDICTED: pentatricopeptide repeat-containing protein At5g42310, mitochondrial-like [Cucumis melo] >TYK16891.1 pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa])

HSP 1 Score: 974.5 bits (2518), Expect = 3.5e-280
Identity = 489/518 (94.40%), Postives = 496/518 (95.75%), Query Frame = 0


Query: 1   MKMHSIFLPKAFIVSSFGGVFSDHLLQRGSSKCDGKYMFDGGIVKLFRNNSLNFASKAVV 60
           MKM SIFLPKAFIVSSFGG FSDHLL R SSK DG Y FDG I+K FRNN LN ASKA V
Sbjct: 1   MKMQSIFLPKAFIVSSFGG-FSDHLLHRDSSKFDGIYTFDGAILKFFRNNFLNLASKAAV 60

Query: 61  DDNCIISSRWHGCIDEEELSSESCNRLIRDYCKVGDVDSAMSLLAHMESVGLHATMTSYT 120
           DDNCI+SSRWHGCIDEEELSSESCNRLI DYCKVG+VDSAMSLLAHMESVGLHATM SYT
Sbjct: 61  DDNCIVSSRWHGCIDEEELSSESCNRLICDYCKVGNVDSAMSLLAHMESVGLHATMASYT 120

Query: 121 YLIEALGNVGRTLEADIIFQEMISFGCKPRTVVCNALLRGFLRKGLLDLASGVFVLMSDL 180
           YLIEALGNVGRTLEADIIFQEMISFGCKPRT+VCNALLRGFLRKGLLDLASGV VLMSDL
Sbjct: 121 YLIEALGNVGRTLEADIIFQEMISFGCKPRTIVCNALLRGFLRKGLLDLASGVLVLMSDL 180

Query: 181 DIKKNQETYEILLDYHVNAGRLEDTWSIINEMKRKGFELNSFVYSKVIVIYQNNGMWKKA 240
           DIKKNQETYEILLDYHVNAGRLEDTWSIINEMKRKGFELNSFVYSKVIVIYQNNGMWKKA
Sbjct: 181 DIKKNQETYEILLDYHVNAGRLEDTWSIINEMKRKGFELNSFVYSKVIVIYQNNGMWKKA 240

Query: 241 VGIVDEIRKSGISMDKHIYNSIIDTFGKYGHLSEALEVFKRMQQDGVVPDITTWNSLIQW 300
           VGIVDEIRKSGISMDKHIYNSIIDTFGKYG LSEALEVFKRMQQD VVPDITTWNSLIQW
Sbjct: 241 VGIVDEIRKSGISMDKHIYNSIIDTFGKYGQLSEALEVFKRMQQDDVVPDITTWNSLIQW 300

Query: 301 NCKSGNLATALELFTDMQEQGMHPDPKIFITLISFLGEQGKWDVINQNLDSMKLRGHKNS 360
           NCK+GNLATALELFTDMQEQGMHPDPKIFITLISFL EQGKWDVI QNLDSMKLRGHKNS
Sbjct: 301 NCKAGNLATALELFTDMQEQGMHPDPKIFITLISFLSEQGKWDVIKQNLDSMKLRGHKNS 360

Query: 361 VLVYEILVDIYGQYGQFQDAEKCISALKSAGLLASCSNFCIIANAFAQQGLCEETVKVLQ 420
           VLVYEILVDIYGQYGQFQD EKCISALKSAGLL S SNFCIIANAFAQQGLCEETVKVLQ
Sbjct: 361 VLVYEILVDIYGQYGQFQDGEKCISALKSAGLLPSSSNFCIIANAFAQQGLCEETVKVLQ 420

Query: 421 LMEAEGIEPNLVMLNVLINAFAVAGRHSEALAIYHHIIEVGISPDVITYTTLMKAFIRAK 480
           LMEAEGIEPNLVMLNVLINAFAVAGRHSEALAIYHHIIEVGISPDVITYTTLMKAFIRAK
Sbjct: 421 LMEAEGIEPNLVMLNVLINAFAVAGRHSEALAIYHHIIEVGISPDVITYTTLMKAFIRAK 480

Query: 481 KFAKVPEIYKEMESAGCTPDRKAREMLKSVTAILEQRH 519
           KF+KVPEIYKEMESAGCTPDRKAREMLKSVTA+LEQRH
Sbjct: 481 KFSKVPEIYKEMESAGCTPDRKAREMLKSVTAVLEQRH 517

[Close]

BLAST of CsaV3_4G004450 vs. NCBI nr
Match: XP_038901793.1 (pentatricopeptide repeat-containing protein At5g42310, chloroplastic-like isoform X3 [Benincasa hispida] >XP_038901802.1 pentatricopeptide repeat-containing protein At5g42310, chloroplastic-like isoform X3 [Benincasa hispida])

HSP 1 Score: 929.9 bits (2402), Expect = 9.9e-267
Identity = 464/520 (89.23%), Postives = 486/520 (93.46%), Query Frame = 0


Query: 1   MKMHSIFLPKAFIVSSFGGVFSDHLLQRGSSKCDGKYMFDGGIVKLFRNNSLNFASKAVV 60
           MKM S FLPK+ IVSSFGGVFSD LL   S KC G+YMFD   +KLFRNN+L   SK  +
Sbjct: 1   MKMQSTFLPKSLIVSSFGGVFSDLLLNPRSIKCVGRYMFDDAALKLFRNNALKKGSKEAL 60

Query: 61  DDNCIISSRWHGCIDEEELSSESCNRLIRDYCKVGDVDSAMSLLAHMESVGLHATMTSYT 120
           DDN IISSRWHGC DE ELSS+ CN LIRDYCKVG+VDSAMSLLAHMESVGLHA++ SYT
Sbjct: 61  DDNHIISSRWHGCRDEAELSSDLCNCLIRDYCKVGNVDSAMSLLAHMESVGLHASVASYT 120

Query: 121 YLIEALGNVGRTLEADIIFQEMISFGCKPRTVVCNALLRGFLRKGLLDLASGVFVLMSDL 180
           YLIEALGN+GRTLEADI+FQEM+SFGCKPRT+VCNALLRGFLRKGLLDLASGV VLMSDL
Sbjct: 121 YLIEALGNLGRTLEADILFQEMLSFGCKPRTIVCNALLRGFLRKGLLDLASGVLVLMSDL 180

Query: 181 DIKKNQETYEILLDYHVNAGRLEDTWSIINEMKRKGFELNSFVYSKVIVIYQNNGMWKKA 240
           DIKKNQETYEILLDYH NAGRLEDTWSIINEMK+KGFELNSFVYSKVIVIYQNNGMWKKA
Sbjct: 181 DIKKNQETYEILLDYHANAGRLEDTWSIINEMKQKGFELNSFVYSKVIVIYQNNGMWKKA 240

Query: 241 VGIVDEIRKSGISMDKHIYNSIIDTFGKYGHLSEALEVFKRMQQDGVVPDITTWNSLIQW 300
           VGIVDEIRKSGIS+DK IYNSI+DTFGKYG LSEALEVFKRMQQDGV+PDITTWNSLIQW
Sbjct: 241 VGIVDEIRKSGISVDKCIYNSIVDTFGKYGQLSEALEVFKRMQQDGVMPDITTWNSLIQW 300

Query: 301 NCKSGNLATALELFTDMQEQGMHPDPKIFITLISFLGEQGKWDVINQNLDSMKLRGHKNS 360
           NCK+GNLATALELFTDMQEQGMHPDPKIF+TLIS LGEQGKWDVI QNLDSMKLRGHK+S
Sbjct: 301 NCKAGNLATALELFTDMQEQGMHPDPKIFVTLISSLGEQGKWDVIKQNLDSMKLRGHKDS 360

Query: 361 VLVYEILVDIYGQYGQFQDAEKCISALKSAGLLASCSNFCIIANAFAQQGLCEETVKVLQ 420
            LVYEILVDIYGQYGQFQDAEKCISALKSAGLL S SNFCIIANAFAQQGL EETVKVLQ
Sbjct: 361 GLVYEILVDIYGQYGQFQDAEKCISALKSAGLLPSASNFCIIANAFAQQGLSEETVKVLQ 420

Query: 421 LMEAEGIEPNLVMLNVLINAFAVAGRHSEALAIYHHIIEVGISPDVITYTTLMKAFIRAK 480
           LMEA+GIEPNLVMLNVLINAFAVAGRHSEALAIYHHIIEVGISPDVITYTTLMKAFIRAK
Sbjct: 421 LMEADGIEPNLVMLNVLINAFAVAGRHSEALAIYHHIIEVGISPDVITYTTLMKAFIRAK 480

Query: 481 KFAKVPEIYKEMESAGCTPDRKAREMLKSVTAILEQRHYR 521
           KFAKVPEIYKEMESAGCTPDRKAREMLKSVT +LEQRHYR
Sbjct: 481 KFAKVPEIYKEMESAGCTPDRKAREMLKSVTVVLEQRHYR 520

[Close]

BLAST of CsaV3_4G004450 vs. NCBI nr
Match: XP_038901745.1 (pentatricopeptide repeat-containing protein At5g42310, chloroplastic-like isoform X2 [Benincasa hispida] >XP_038901752.1 pentatricopeptide repeat-containing protein At5g42310, chloroplastic-like isoform X2 [Benincasa hispida] >XP_038901759.1 pentatricopeptide repeat-containing protein At5g42310, chloroplastic-like isoform X2 [Benincasa hispida] >XP_038901767.1 pentatricopeptide repeat-containing protein At5g42310, chloroplastic-like isoform X2 [Benincasa hispida] >XP_038901775.1 pentatricopeptide repeat-containing protein At5g42310, chloroplastic-like isoform X2 [Benincasa hispida] >XP_038901783.1 pentatricopeptide repeat-containing protein At5g42310, chloroplastic-like isoform X2 [Benincasa hispida])

HSP 1 Score: 925.6 bits (2391), Expect = 1.9e-265
Identity = 462/518 (89.19%), Postives = 484/518 (93.44%), Query Frame = 0


Query: 1   MKMHSIFLPKAFIVSSFGGVFSDHLLQRGSSKCDGKYMFDGGIVKLFRNNSLNFASKAVV 60
           MKM S FLPK+ IVSSFGGVFSD LL   S KC G+YMFD   +KLFRNN+L   SK  +
Sbjct: 1   MKMQSTFLPKSLIVSSFGGVFSDLLLNPRSIKCVGRYMFDDAALKLFRNNALKKGSKEAL 60

Query: 61  DDNCIISSRWHGCIDEEELSSESCNRLIRDYCKVGDVDSAMSLLAHMESVGLHATMTSYT 120
           DDN IISSRWHGC DE ELSS+ CN LIRDYCKVG+VDSAMSLLAHMESVGLHA++ SYT
Sbjct: 61  DDNHIISSRWHGCRDEAELSSDLCNCLIRDYCKVGNVDSAMSLLAHMESVGLHASVASYT 120

Query: 121 YLIEALGNVGRTLEADIIFQEMISFGCKPRTVVCNALLRGFLRKGLLDLASGVFVLMSDL 180
           YLIEALGN+GRTLEADI+FQEM+SFGCKPRT+VCNALLRGFLRKGLLDLASGV VLMSDL
Sbjct: 121 YLIEALGNLGRTLEADILFQEMLSFGCKPRTIVCNALLRGFLRKGLLDLASGVLVLMSDL 180

Query: 181 DIKKNQETYEILLDYHVNAGRLEDTWSIINEMKRKGFELNSFVYSKVIVIYQNNGMWKKA 240
           DIKKNQETYEILLDYH NAGRLEDTWSIINEMK+KGFELNSFVYSKVIVIYQNNGMWKKA
Sbjct: 181 DIKKNQETYEILLDYHANAGRLEDTWSIINEMKQKGFELNSFVYSKVIVIYQNNGMWKKA 240

Query: 241 VGIVDEIRKSGISMDKHIYNSIIDTFGKYGHLSEALEVFKRMQQDGVVPDITTWNSLIQW 300
           VGIVDEIRKSGIS+DK IYNSI+DTFGKYG LSEALEVFKRMQQDGV+PDITTWNSLIQW
Sbjct: 241 VGIVDEIRKSGISVDKCIYNSIVDTFGKYGQLSEALEVFKRMQQDGVMPDITTWNSLIQW 300

Query: 301 NCKSGNLATALELFTDMQEQGMHPDPKIFITLISFLGEQGKWDVINQNLDSMKLRGHKNS 360
           NCK+GNLATALELFTDMQEQGMHPDPKIF+TLIS LGEQGKWDVI QNLDSMKLRGHK+S
Sbjct: 301 NCKAGNLATALELFTDMQEQGMHPDPKIFVTLISSLGEQGKWDVIKQNLDSMKLRGHKDS 360

Query: 361 VLVYEILVDIYGQYGQFQDAEKCISALKSAGLLASCSNFCIIANAFAQQGLCEETVKVLQ 420
            LVYEILVDIYGQYGQFQDAEKCISALKSAGLL S SNFCIIANAFAQQGL EETVKVLQ
Sbjct: 361 GLVYEILVDIYGQYGQFQDAEKCISALKSAGLLPSASNFCIIANAFAQQGLSEETVKVLQ 420

Query: 421 LMEAEGIEPNLVMLNVLINAFAVAGRHSEALAIYHHIIEVGISPDVITYTTLMKAFIRAK 480
           LMEA+GIEPNLVMLNVLINAFAVAGRHSEALAIYHHIIEVGISPDVITYTTLMKAFIRAK
Sbjct: 421 LMEADGIEPNLVMLNVLINAFAVAGRHSEALAIYHHIIEVGISPDVITYTTLMKAFIRAK 480

Query: 481 KFAKVPEIYKEMESAGCTPDRKAREMLKSVTAILEQRH 519
           KFAKVPEIYKEMESAGCTPDRKAREMLKSVT +LEQRH
Sbjct: 481 KFAKVPEIYKEMESAGCTPDRKAREMLKSVTVVLEQRH 518

[Close]

BLAST of CsaV3_4G004450 vs. ExPASy Swiss-Prot
Match: Q8L844 (Pentatricopeptide repeat-containing protein At5g42310, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=CRP1 PE=1 SV=1)

HSP 1 Score: 350.1 bits (897), Expect = 4.2e-95
Identity = 175/442 (39.59%), Postives = 271/442 (61.31%), Query Frame = 0


Query: 75  DEEELSSESCNRLIRDYCKVGDVDSAMSLLAHMESVGLHATMTSYTYLIEALGNVGRTLE 134
           D+ EL  +  N +I  + K GD   A+ LL   ++ GL A   +   +I AL + GRTLE
Sbjct: 263 DKLELDVQLVNDIIMGFAKSGDPSKALQLLGMAQATGLSAKTATLVSIISALADSGRTLE 322

Query: 135 ADIIFQEMISFGCKPRTVVCNALLRGFLRKGLLDLASGVFVLMSDLDIKKNQETYEILLD 194
           A+ +F+E+   G KPRT   NALL+G+++ G L  A  +   M    +  ++ TY +L+D
Sbjct: 323 AEALFEELRQSGIKPRTRAYNALLKGYVKTGPLKDAESMVSEMEKRGVSPDEHTYSLLID 382

Query: 195 YHVNAGRLEDTWSIINEMKRKGFELNSFVYSKVIVIYQNNGMWKKAVGIVDEIRKSGISM 254
            +VNAGR E    ++ EM+    + NSFV+S+++  +++ G W+K   ++ E++  G+  
Sbjct: 383 AYVNAGRWESARIVLKEMEAGDVQPNSFVFSRLLAGFRDRGEWQKTFQVLKEMKSIGVKP 442

Query: 255 DKHIYNSIIDTFGKYGHLSEALEVFKRMQQDGVVPDITTWNSLIQWNCKSGNLATALELF 314
           D+  YN +IDTFGK+  L  A+  F RM  +G+ PD  TWN+LI  +CK G    A E+F
Sbjct: 443 DRQFYNVVIDTFGKFNCLDHAMTTFDRMLSEGIEPDRVTWNTLIDCHCKHGRHIVAEEMF 502

Query: 315 TDMQEQGMHPDPKIFITLISFLGEQGKWDVINQNLDSMKLRGHKNSVLVYEILVDIYGQY 374
             M+ +G  P    +  +I+  G+Q +WD + + L  MK +G   +V+ +  LVD+YG+ 
Sbjct: 503 EAMERRGCLPCATTYNIMINSYGDQERWDDMKRLLGKMKSQGILPNVVTHTTLVDVYGKS 562

Query: 375 GQFQDAEKCISALKSAGLLASCSNFCIIANAFAQQGLCEETVKVLQLMEAEGIEPNLVML 434
           G+F DA +C+  +KS GL  S + +  + NA+AQ+GL E+ V   ++M ++G++P+L+ L
Sbjct: 563 GRFNDAIECLEEMKSVGLKPSSTMYNALINAYAQRGLSEQAVNAFRVMTSDGLKPSLLAL 622

Query: 435 NVLINAFAVAGRHSEALAIYHHIIEVGISPDVITYTTLMKAFIRAKKFAKVPEIYKEMES 494
           N LINAF    R +EA A+  ++ E G+ PDV+TYTTLMKA IR  KF KVP +Y+EM  
Sbjct: 623 NSLINAFGEDRRDAEAFAVLQYMKENGVKPDVVTYTTLMKALIRVDKFQKVPVVYEEMIM 682

Query: 495 AGCTPDRKAREMLKSVTAILEQ 517
           +GC PDRKAR ML+S    ++Q
Sbjct: 683 SGCKPDRKARSMLRSALRYMKQ 704

[Close]

BLAST of CsaV3_4G004450 vs. ExPASy Swiss-Prot
Match: A0A1D6IEG9 (Pentatricopeptide repeat-containing protein CRP1, chloroplastic OS=Zea mays OX=4577 GN=CRP1 PE=1 SV=1)

HSP 1 Score: 339.3 bits (869), Expect = 7.5e-92
Identity = 172/424 (40.57%), Postives = 267/424 (62.97%), Query Frame = 0


Query: 87  LIRDYCKVGDVDSAMSLLAHMESVGLHATMTSYTYLIEALGNVGRTLEADIIFQEMISFG 146
           LI  + +    D+A+ LLA  +++GL     + T LI ALG  GR  EA+ +F E    G
Sbjct: 234 LISAFARAALPDAALELLASAQAIGLTPRSNAVTALISALGTAGRVAEAEALFLEFFLAG 293

Query: 147 -CKPRTVVCNALLRGFLRKGLLDLASGVFVLMSDLDIKKNQETYEILLDYHVNAGRLEDT 206
             KPRT   NALL+G++R   L  A  V   MS   +  ++ TY +L+D +  AGR E  
Sbjct: 294 EIKPRTRAYNALLKGYVRIASLKNAEQVLDEMSQCGVAPDEATYSLLVDAYTRAGRWESA 353

Query: 207 WSIINEMKRKGFELNSFVYSKVIVIYQNNGMWKKAVGIVDEIRKSGISMDKHIYNSIIDT 266
             ++ EM+  G + +S+V+S+++  +++ G W+KA  ++ E++ SG+  D+H YN +IDT
Sbjct: 354 RILLKEMEADGVKPSSYVFSRILAGFRDRGDWQKAFAVLREMQASGVRPDRHFYNVMIDT 413

Query: 267 FGKYGHLSEALEVFKRMQQDGVVPDITTWNSLIQWNCKSGNLATALELFTDMQEQGMHPD 326
           FGKY  L  A++ F +M+++G+ PD+ TWN+LI  +CK G    A ELF +M+E    P 
Sbjct: 414 FGKYNCLGHAMDAFNKMREEGIEPDVVTWNTLIDAHCKGGRHDRAAELFEEMRESNCPPG 473

Query: 327 PKIFITLISFLGEQGKWDVINQNLDSMKLRGHKNSVLVYEILVDIYGQYGQFQDAEKCIS 386
              +  +I+ LGEQ  W+ +   L  MK +G   +++ Y  LVD+YG+ G++++A  CI 
Sbjct: 474 TTTYNIMINLLGEQEHWEGVEAMLSEMKEQGLVPNIITYTTLVDVYGRSGRYKEAIDCIE 533

Query: 387 ALKSAGLLASCSNFCIIANAFAQQGLCEETVKVLQLMEAEGIEPNLVMLNVLINAFAVAG 446
           A+K+ GL  S + +  + NA+AQ+GL +  + V++ M+A+G+E ++++LN LINAF    
Sbjct: 534 AMKADGLKPSPTMYHALVNAYAQRGLADHALNVVKAMKADGLEVSILVLNSLINAFGEDR 593

Query: 447 RHSEALAIYHHIIEVGISPDVITYTTLMKAFIRAKKFAKVPEIYKEMESAGCTPDRKARE 506
           R  EA ++   + E G+ PDVITYTTLMKA IR ++F KVP IY+EM ++GC PDRKAR 
Sbjct: 594 RVVEAFSVLQFMRENGLRPDVITYTTLMKALIRVEQFDKVPVIYEEMITSGCAPDRKARA 653

Query: 507 MLKS 510
           ML+S
Sbjct: 654 MLRS 657

[Close]

BLAST of CsaV3_4G004450 vs. ExPASy Swiss-Prot
Match: Q84ZD2 (Pentatricopeptide repeat-containing protein CRP1 homolog, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=Os07g0548300 PE=3 SV=1)

HSP 1 Score: 337.4 bits (864), Expect = 2.8e-91
Identity = 174/435 (40.00%), Postives = 272/435 (62.53%), Query Frame = 0


Query: 87  LIRDYCKVGDVDSAMSLLAHMESVGLHATMTSYTYLIEALGNVGRTLEADIIFQEMISFG 146
           LI  + +    D+A+ LLA  +++GL     + T LI +LG+  R  EA+ +F E    G
Sbjct: 227 LISAFARARLPDAALELLASAQAIGLTPRSNAVTALISSLGSARRVAEAEALFLEFFLAG 286

Query: 147 -CKPRTVVCNALLRGFLRKGLLDLASGVFVLMSDLDIKKNQETYEILLDYHVNAGRLEDT 206
             KPRT   NALL+G+++ G L  A  V   MS   +  ++ TY +L+D +  AGR E  
Sbjct: 287 EIKPRTRAYNALLKGYVKIGSLKNAEQVLDEMSQCGVAPDEATYSLLVDAYTRAGRWESA 346

Query: 207 WSIINEMKRKGFELNSFVYSKVIVIYQNNGMWKKAVGIVDEIRKSGISMDKHIYNSIIDT 266
             ++ EM+  G + +S+V+S+++  +++ G W+KA  ++ E+  SG+  D+H YN +IDT
Sbjct: 347 RILLKEMEADGVKPSSYVFSRILAGFRDRGEWQKAFAVLREMHASGVRPDRHFYNVMIDT 406

Query: 267 FGKYGHLSEALEVFKRMQQDGVVPDITTWNSLIQWNCKSGNLATALELFTDMQEQGMHPD 326
           FGKY  L  A++ F RM+++G+ PD+ TWN+LI  +CK G    A+ELF +M+E      
Sbjct: 407 FGKYNCLGHAMDAFDRMREEGIEPDVVTWNTLIDAHCKGGRHDRAIELFDEMRESNCPLG 466

Query: 327 PKIFITLISFLGEQGKWDVINQNLDSMKLRGHKNSVLVYEILVDIYGQYGQFQDAEKCIS 386
              +  +I+ LGE+ +W+ +   L  MK +G   +++ Y  LVD+YG+ G+F++A  CI 
Sbjct: 467 TTTYNIMINLLGEEQRWEGVEAMLAEMKEQGLVPNIITYTTLVDVYGRSGRFKEAVDCIE 526

Query: 387 ALKSAGLLASCSNFCIIANAFAQQGLCEETVKVLQLMEAEGIEPNLVMLNVLINAFAVAG 446
           A+K+ GL  S + +  + NA+AQ+GL +  + V++ M A+G+E + V+LN LINAF    
Sbjct: 527 AMKADGLKPSPTMYHALVNAYAQRGLADHALNVVKAMRADGLEASTVVLNSLINAFGEDR 586

Query: 447 RHSEALAIYHHIIEVGISPDVITYTTLMKAFIRAKKFAKVPEIYKEMESAGCTPDRKARE 506
           R +EA ++   + E G+ PDVITYTTLMKA IR ++F KVP IY+EM ++GC PDRKAR 
Sbjct: 587 RIAEAFSVLQFMKENGLRPDVITYTTLMKALIRVEQFEKVPVIYEEMITSGCAPDRKARA 646

Query: 507 MLKSVTAILEQRHYR 521
           ML+S  A+   +H R
Sbjct: 647 MLRS--ALRYMKHMR 659

[Close]

BLAST of CsaV3_4G004450 vs. ExPASy Swiss-Prot
Match: Q9FFZ2 (Putative pentatricopeptide repeat-containing protein At5g36300 OS=Arabidopsis thaliana OX=3702 GN=At5g36300 PE=3 SV=3)

HSP 1 Score: 293.5 bits (750), Expect = 4.7e-78
Identity = 175/420 (41.67%), Postives = 229/420 (54.52%), Query Frame = 0


Query: 74  IDEEELSSESCNRLIRDYCKVGDVDSAMSLLAHMESVGLHATMTSYTYLIEALGNVGRTL 133
           I    +S    N  IR +C+ G+ + AMSLLA + S+G      SY   IE L ++ RTL
Sbjct: 4   ISHTRISLSMYNSWIRYFCRTGETNEAMSLLAEIHSLGSRPDPLSYVSFIETLASLRRTL 63

Query: 134 EADIIFQEMISFGCKPRTVV--CNALLRGFLRKGLLDLASGVFVLMSDLDIKKNQETYEI 193
           EAD +F E++ F       V   NAL+  +LRK                           
Sbjct: 64  EADALFHEVVRFMIYGSYSVRLYNALVSRYLRK--------------------------- 123

Query: 194 LLDYHVNAGRLEDTWSIINEMKRKGFELNSFVYSKVIVIYQNNGMWKKAVGIVDEIRKSG 253
                      E +W ++NEMK++ F LNSFVY K+I IY++NGMWKKA+GIV+EIR+ G
Sbjct: 124 -----------EVSWRVVNEMKKRKFRLNSFVYGKIIRIYRDNGMWKKALGIVEEIREIG 183

Query: 254 ISMDKHIYNSIIDTFGKYGHLSEALEVFKRMQQDG-VVPDITTWNSLIQWNCKSGNLATA 313
           + MD  IYNS+IDTFGKYG L E L+V +++Q+     P+I TWNSLI+W+C  G +  A
Sbjct: 184 LPMDVEIYNSVIDTFGKYGELDEELQVLEKLQRSSDSRPNIRTWNSLIRWHCHHGAVDMA 243

Query: 314 LELFTDMQEQGMHPDPKIFITLISFLGEQGKWDVINQNLDSMKLRGHKNSVLVYEILVDI 373
           LELFT +                                                     
Sbjct: 244 LELFTMI----------------------------------------------------- 303

Query: 374 YGQYGQFQDAEKCISALKSAGLLASCSNFCIIANAFAQQGLCEETVKVLQLMEAEGIEPN 433
                 F+D  + +  LKS G+  S + FC +ANA+AQQGLC++TVKVL++ME EGIEPN
Sbjct: 304 ------FEDIGELVGKLKSQGVAPSANLFCTLANAYAQQGLCKQTVKVLKMMENEGIEPN 326

Query: 434 LVMLNVLINAFAVAGRHSEALAIYHHIIE-VGISPDVITYTTLMKAFIRAKKFAKVPEIY 490
           L+MLNVLINAF  AG+H EAL+IYHHI E V I PDV+TY+TLMKAF RAKK+  V   Y
Sbjct: 364 LIMLNVLINAFGTAGKHMEALSIYHHIKETVWIHPDVVTYSTLMKAFTRAKKYEMVCSFY 326

[Close]

BLAST of CsaV3_4G004450 vs. ExPASy Swiss-Prot
Match: Q9FIX3 (Pentatricopeptide repeat-containing protein At5g39710 OS=Arabidopsis thaliana OX=3702 GN=EMB2745 PE=2 SV=1)

HSP 1 Score: 195.3 bits (495), Expect = 1.7e-48
Identity = 112/415 (26.99%), Postives = 207/415 (49.88%), Query Frame = 0


Query: 87  LIRDYCKVGDVDSAMSLLAHMESVGLHATMTSYTYLIEALGNVGRTLE-ADIIFQEMISF 146
           +++ Y ++  +D A+S++   ++ G    + SY  +++A     R +  A+ +F+EM+  
Sbjct: 140 VVKSYSRLSLIDKALSIVHLAQAHGFMPGVLSYNAVLDATIRSKRNISFAENVFKEMLES 199

Query: 147 GCKPRTVVCNALLRGFLRKGLLDLASGVFVLMSDLDIKKNQETYEILLDYHVNAGRLEDT 206
              P     N L+RGF   G +D+A  +F  M       N  TY  L+D +    +++D 
Sbjct: 200 QVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDG 259

Query: 207 WSIINEMKRKGFELNSFVYSKVIVIYQNNGMWKKAVGIVDEIRKSGISMDKHIYNSIIDT 266
           + ++  M  KG E N   Y+ VI      G  K+   ++ E+ + G S+D+  YN++I  
Sbjct: 260 FKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKG 319

Query: 267 FGKYGHLSEALEVFKRMQQDGVVPDITTWNSLIQWNCKSGNLATALELFTDMQEQGMHPD 326
           + K G+  +AL +   M + G+ P + T+ SLI   CK+GN+  A+E    M+ +G+ P+
Sbjct: 320 YCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPN 379

Query: 327 PKIFITLISFLGEQGKWDVINQNLDSMKLRGHKNSVLVYEILVDIYGQYGQFQDAEKCIS 386
            + + TL+    ++G  +   + L  M   G   SV+ Y  L++ +   G+ +DA   + 
Sbjct: 380 ERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLE 439

Query: 387 ALKSAGLLASCSNFCIIANAFAQQGLCEETVKVLQLMEAEGIEPNLVMLNVLINAFAVAG 446
            +K  GL     ++  + + F +    +E ++V + M  +GI+P+ +  + LI  F    
Sbjct: 440 DMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQR 499

Query: 447 RHSEALAIYHHIIEVGISPDVITYTTLMKAFIRAKKFAKVPEIYKEMESAGCTPD 501
           R  EA  +Y  ++ VG+ PD  TYT L+ A+       K  +++ EM   G  PD
Sbjct: 500 RTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPD 554

[Close]

BLAST of CsaV3_4G004450 vs. ExPASy TrEMBL
Match: A0A0A0KZ91 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G025700 PE=4 SV=1)

HSP 1 Score: 1044.3 bits (2699), Expect = 1.7e-301
Identity = 520/520 (100.00%), Postives = 520/520 (100.00%), Query Frame = 0


Query: 1   MKMHSIFLPKAFIVSSFGGVFSDHLLQRGSSKCDGKYMFDGGIVKLFRNNSLNFASKAVV 60
           MKMHSIFLPKAFIVSSFGGVFSDHLLQRGSSKCDGKYMFDGGIVKLFRNNSLNFASKAVV
Sbjct: 1   MKMHSIFLPKAFIVSSFGGVFSDHLLQRGSSKCDGKYMFDGGIVKLFRNNSLNFASKAVV 60

Query: 61  DDNCIISSRWHGCIDEEELSSESCNRLIRDYCKVGDVDSAMSLLAHMESVGLHATMTSYT 120
           DDNCIISSRWHGCIDEEELSSESCNRLIRDYCKVGDVDSAMSLLAHMESVGLHATMTSYT
Sbjct: 61  DDNCIISSRWHGCIDEEELSSESCNRLIRDYCKVGDVDSAMSLLAHMESVGLHATMTSYT 120

Query: 121 YLIEALGNVGRTLEADIIFQEMISFGCKPRTVVCNALLRGFLRKGLLDLASGVFVLMSDL 180
           YLIEALGNVGRTLEADIIFQEMISFGCKPRTVVCNALLRGFLRKGLLDLASGVFVLMSDL
Sbjct: 121 YLIEALGNVGRTLEADIIFQEMISFGCKPRTVVCNALLRGFLRKGLLDLASGVFVLMSDL 180

Query: 181 DIKKNQETYEILLDYHVNAGRLEDTWSIINEMKRKGFELNSFVYSKVIVIYQNNGMWKKA 240
           DIKKNQETYEILLDYHVNAGRLEDTWSIINEMKRKGFELNSFVYSKVIVIYQNNGMWKKA
Sbjct: 181 DIKKNQETYEILLDYHVNAGRLEDTWSIINEMKRKGFELNSFVYSKVIVIYQNNGMWKKA 240

Query: 241 VGIVDEIRKSGISMDKHIYNSIIDTFGKYGHLSEALEVFKRMQQDGVVPDITTWNSLIQW 300
           VGIVDEIRKSGISMDKHIYNSIIDTFGKYGHLSEALEVFKRMQQDGVVPDITTWNSLIQW
Sbjct: 241 VGIVDEIRKSGISMDKHIYNSIIDTFGKYGHLSEALEVFKRMQQDGVVPDITTWNSLIQW 300

Query: 301 NCKSGNLATALELFTDMQEQGMHPDPKIFITLISFLGEQGKWDVINQNLDSMKLRGHKNS 360
           NCKSGNLATALELFTDMQEQGMHPDPKIFITLISFLGEQGKWDVINQNLDSMKLRGHKNS
Sbjct: 301 NCKSGNLATALELFTDMQEQGMHPDPKIFITLISFLGEQGKWDVINQNLDSMKLRGHKNS 360

Query: 361 VLVYEILVDIYGQYGQFQDAEKCISALKSAGLLASCSNFCIIANAFAQQGLCEETVKVLQ 420
           VLVYEILVDIYGQYGQFQDAEKCISALKSAGLLASCSNFCIIANAFAQQGLCEETVKVLQ
Sbjct: 361 VLVYEILVDIYGQYGQFQDAEKCISALKSAGLLASCSNFCIIANAFAQQGLCEETVKVLQ 420

Query: 421 LMEAEGIEPNLVMLNVLINAFAVAGRHSEALAIYHHIIEVGISPDVITYTTLMKAFIRAK 480
           LMEAEGIEPNLVMLNVLINAFAVAGRHSEALAIYHHIIEVGISPDVITYTTLMKAFIRAK
Sbjct: 421 LMEAEGIEPNLVMLNVLINAFAVAGRHSEALAIYHHIIEVGISPDVITYTTLMKAFIRAK 480

Query: 481 KFAKVPEIYKEMESAGCTPDRKAREMLKSVTAILEQRHYR 521
           KFAKVPEIYKEMESAGCTPDRKAREMLKSVTAILEQRHYR
Sbjct: 481 KFAKVPEIYKEMESAGCTPDRKAREMLKSVTAILEQRHYR 520

[Close]

BLAST of CsaV3_4G004450 vs. ExPASy TrEMBL
Match: A0A5A7TTI3 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold46G004510 PE=4 SV=1)

HSP 1 Score: 977.6 bits (2526), Expect = 2.0e-281
Identity = 491/518 (94.79%), Postives = 496/518 (95.75%), Query Frame = 0


Query: 1   MKMHSIFLPKAFIVSSFGGVFSDHLLQRGSSKCDGKYMFDGGIVKLFRNNSLNFASKAVV 60
           MKM SIFLPKAFIVSSFGG FSDHLL R SSK DGKY FDG I+K FRNN LN ASKA V
Sbjct: 1   MKMQSIFLPKAFIVSSFGG-FSDHLLHRDSSKFDGKYTFDGAILKFFRNNFLNLASKAAV 60

Query: 61  DDNCIISSRWHGCIDEEELSSESCNRLIRDYCKVGDVDSAMSLLAHMESVGLHATMTSYT 120
           DDNCIISSRWHGCIDEEELSSESCNRLI DYCKVG+VDSAMSLLAHMESVGLHATM SYT
Sbjct: 61  DDNCIISSRWHGCIDEEELSSESCNRLICDYCKVGNVDSAMSLLAHMESVGLHATMASYT 120

Query: 121 YLIEALGNVGRTLEADIIFQEMISFGCKPRTVVCNALLRGFLRKGLLDLASGVFVLMSDL 180
           YLIEALGNVGRTLEADIIFQEMISFGCKPRT+VCNALLRGFLRKGLLDLASGV VLMSDL
Sbjct: 121 YLIEALGNVGRTLEADIIFQEMISFGCKPRTIVCNALLRGFLRKGLLDLASGVLVLMSDL 180

Query: 181 DIKKNQETYEILLDYHVNAGRLEDTWSIINEMKRKGFELNSFVYSKVIVIYQNNGMWKKA 240
           DIKKNQETYEILLDYHVNAGRLEDTWSIINEMKRKGFELNSFVYSKVIVIYQNNGMWKKA
Sbjct: 181 DIKKNQETYEILLDYHVNAGRLEDTWSIINEMKRKGFELNSFVYSKVIVIYQNNGMWKKA 240

Query: 241 VGIVDEIRKSGISMDKHIYNSIIDTFGKYGHLSEALEVFKRMQQDGVVPDITTWNSLIQW 300
           VGIVDEIRKSGISMDKHIYNSIIDTFGKYG LSEALEVFKRMQQD VVPDITTWNSLIQW
Sbjct: 241 VGIVDEIRKSGISMDKHIYNSIIDTFGKYGQLSEALEVFKRMQQDDVVPDITTWNSLIQW 300

Query: 301 NCKSGNLATALELFTDMQEQGMHPDPKIFITLISFLGEQGKWDVINQNLDSMKLRGHKNS 360
           NCK+GNLATALELFTDMQEQGMHPDPKIFITLISFL EQGKWDVI QNLDSMKLRGHKNS
Sbjct: 301 NCKAGNLATALELFTDMQEQGMHPDPKIFITLISFLSEQGKWDVIKQNLDSMKLRGHKNS 360

Query: 361 VLVYEILVDIYGQYGQFQDAEKCISALKSAGLLASCSNFCIIANAFAQQGLCEETVKVLQ 420
           VLVYEILVDIYGQYGQFQD EKCISALKSAGLL S SNFCIIANAFAQQGLCEETVKVLQ
Sbjct: 361 VLVYEILVDIYGQYGQFQDGEKCISALKSAGLLPSSSNFCIIANAFAQQGLCEETVKVLQ 420

Query: 421 LMEAEGIEPNLVMLNVLINAFAVAGRHSEALAIYHHIIEVGISPDVITYTTLMKAFIRAK 480
           LMEAEGIEPNLVMLNVLINAFAVAGRHSEALAIYHHIIEVGISPDVITYTTLMKAFIRAK
Sbjct: 421 LMEAEGIEPNLVMLNVLINAFAVAGRHSEALAIYHHIIEVGISPDVITYTTLMKAFIRAK 480

Query: 481 KFAKVPEIYKEMESAGCTPDRKAREMLKSVTAILEQRH 519
           KFAKVPEIYKEMESAGCTPDRK REMLKSVTA+LEQRH
Sbjct: 481 KFAKVPEIYKEMESAGCTPDRKVREMLKSVTAVLEQRH 517

[Close]

BLAST of CsaV3_4G004450 vs. ExPASy TrEMBL
Match: A0A1S4E032 (pentatricopeptide repeat-containing protein At5g42310, mitochondrial-like OS=Cucumis melo OX=3656 GN=LOC103494438 PE=4 SV=1)

HSP 1 Score: 974.5 bits (2518), Expect = 1.7e-280
Identity = 489/518 (94.40%), Postives = 496/518 (95.75%), Query Frame = 0


Query: 1   MKMHSIFLPKAFIVSSFGGVFSDHLLQRGSSKCDGKYMFDGGIVKLFRNNSLNFASKAVV 60
           MKM SIFLPKAFIVSSFGG FSDHLL R SSK DG Y FDG I+K FRNN LN ASKA V
Sbjct: 1   MKMQSIFLPKAFIVSSFGG-FSDHLLHRDSSKFDGIYTFDGAILKFFRNNFLNLASKAAV 60

Query: 61  DDNCIISSRWHGCIDEEELSSESCNRLIRDYCKVGDVDSAMSLLAHMESVGLHATMTSYT 120
           DDNCI+SSRWHGCIDEEELSSESCNRLI DYCKVG+VDSAMSLLAHMESVGLHATM SYT
Sbjct: 61  DDNCIVSSRWHGCIDEEELSSESCNRLICDYCKVGNVDSAMSLLAHMESVGLHATMASYT 120

Query: 121 YLIEALGNVGRTLEADIIFQEMISFGCKPRTVVCNALLRGFLRKGLLDLASGVFVLMSDL 180
           YLIEALGNVGRTLEADIIFQEMISFGCKPRT+VCNALLRGFLRKGLLDLASGV VLMSDL
Sbjct: 121 YLIEALGNVGRTLEADIIFQEMISFGCKPRTIVCNALLRGFLRKGLLDLASGVLVLMSDL 180

Query: 181 DIKKNQETYEILLDYHVNAGRLEDTWSIINEMKRKGFELNSFVYSKVIVIYQNNGMWKKA 240
           DIKKNQETYEILLDYHVNAGRLEDTWSIINEMKRKGFELNSFVYSKVIVIYQNNGMWKKA
Sbjct: 181 DIKKNQETYEILLDYHVNAGRLEDTWSIINEMKRKGFELNSFVYSKVIVIYQNNGMWKKA 240

Query: 241 VGIVDEIRKSGISMDKHIYNSIIDTFGKYGHLSEALEVFKRMQQDGVVPDITTWNSLIQW 300
           VGIVDEIRKSGISMDKHIYNSIIDTFGKYG LSEALEVFKRMQQD VVPDITTWNSLIQW
Sbjct: 241 VGIVDEIRKSGISMDKHIYNSIIDTFGKYGQLSEALEVFKRMQQDDVVPDITTWNSLIQW 300

Query: 301 NCKSGNLATALELFTDMQEQGMHPDPKIFITLISFLGEQGKWDVINQNLDSMKLRGHKNS 360
           NCK+GNLATALELFTDMQEQGMHPDPKIFITLISFL EQGKWDVI QNLDSMKLRGHKNS
Sbjct: 301 NCKAGNLATALELFTDMQEQGMHPDPKIFITLISFLSEQGKWDVIKQNLDSMKLRGHKNS 360

Query: 361 VLVYEILVDIYGQYGQFQDAEKCISALKSAGLLASCSNFCIIANAFAQQGLCEETVKVLQ 420
           VLVYEILVDIYGQYGQFQD EKCISALKSAGLL S SNFCIIANAFAQQGLCEETVKVLQ
Sbjct: 361 VLVYEILVDIYGQYGQFQDGEKCISALKSAGLLPSSSNFCIIANAFAQQGLCEETVKVLQ 420

Query: 421 LMEAEGIEPNLVMLNVLINAFAVAGRHSEALAIYHHIIEVGISPDVITYTTLMKAFIRAK 480
           LMEAEGIEPNLVMLNVLINAFAVAGRHSEALAIYHHIIEVGISPDVITYTTLMKAFIRAK
Sbjct: 421 LMEAEGIEPNLVMLNVLINAFAVAGRHSEALAIYHHIIEVGISPDVITYTTLMKAFIRAK 480

Query: 481 KFAKVPEIYKEMESAGCTPDRKAREMLKSVTAILEQRH 519
           KF+KVPEIYKEMESAGCTPDRKAREMLKSVTA+LEQRH
Sbjct: 481 KFSKVPEIYKEMESAGCTPDRKAREMLKSVTAVLEQRH 517

[Close]

BLAST of CsaV3_4G004450 vs. ExPASy TrEMBL
Match: A0A5D3CY36 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold130G00230 PE=4 SV=1)

HSP 1 Score: 974.5 bits (2518), Expect = 1.7e-280
Identity = 489/518 (94.40%), Postives = 496/518 (95.75%), Query Frame = 0


Query: 1   MKMHSIFLPKAFIVSSFGGVFSDHLLQRGSSKCDGKYMFDGGIVKLFRNNSLNFASKAVV 60
           MKM SIFLPKAFIVSSFGG FSDHLL R SSK DG Y FDG I+K FRNN LN ASKA V
Sbjct: 1   MKMQSIFLPKAFIVSSFGG-FSDHLLHRDSSKFDGIYTFDGAILKFFRNNFLNLASKAAV 60

Query: 61  DDNCIISSRWHGCIDEEELSSESCNRLIRDYCKVGDVDSAMSLLAHMESVGLHATMTSYT 120
           DDNCI+SSRWHGCIDEEELSSESCNRLI DYCKVG+VDSAMSLLAHMESVGLHATM SYT
Sbjct: 61  DDNCIVSSRWHGCIDEEELSSESCNRLICDYCKVGNVDSAMSLLAHMESVGLHATMASYT 120

Query: 121 YLIEALGNVGRTLEADIIFQEMISFGCKPRTVVCNALLRGFLRKGLLDLASGVFVLMSDL 180
           YLIEALGNVGRTLEADIIFQEMISFGCKPRT+VCNALLRGFLRKGLLDLASGV VLMSDL
Sbjct: 121 YLIEALGNVGRTLEADIIFQEMISFGCKPRTIVCNALLRGFLRKGLLDLASGVLVLMSDL 180

Query: 181 DIKKNQETYEILLDYHVNAGRLEDTWSIINEMKRKGFELNSFVYSKVIVIYQNNGMWKKA 240
           DIKKNQETYEILLDYHVNAGRLEDTWSIINEMKRKGFELNSFVYSKVIVIYQNNGMWKKA
Sbjct: 181 DIKKNQETYEILLDYHVNAGRLEDTWSIINEMKRKGFELNSFVYSKVIVIYQNNGMWKKA 240

Query: 241 VGIVDEIRKSGISMDKHIYNSIIDTFGKYGHLSEALEVFKRMQQDGVVPDITTWNSLIQW 300
           VGIVDEIRKSGISMDKHIYNSIIDTFGKYG LSEALEVFKRMQQD VVPDITTWNSLIQW
Sbjct: 241 VGIVDEIRKSGISMDKHIYNSIIDTFGKYGQLSEALEVFKRMQQDDVVPDITTWNSLIQW 300

Query: 301 NCKSGNLATALELFTDMQEQGMHPDPKIFITLISFLGEQGKWDVINQNLDSMKLRGHKNS 360
           NCK+GNLATALELFTDMQEQGMHPDPKIFITLISFL EQGKWDVI QNLDSMKLRGHKNS
Sbjct: 301 NCKAGNLATALELFTDMQEQGMHPDPKIFITLISFLSEQGKWDVIKQNLDSMKLRGHKNS 360

Query: 361 VLVYEILVDIYGQYGQFQDAEKCISALKSAGLLASCSNFCIIANAFAQQGLCEETVKVLQ 420
           VLVYEILVDIYGQYGQFQD EKCISALKSAGLL S SNFCIIANAFAQQGLCEETVKVLQ
Sbjct: 361 VLVYEILVDIYGQYGQFQDGEKCISALKSAGLLPSSSNFCIIANAFAQQGLCEETVKVLQ 420

Query: 421 LMEAEGIEPNLVMLNVLINAFAVAGRHSEALAIYHHIIEVGISPDVITYTTLMKAFIRAK 480
           LMEAEGIEPNLVMLNVLINAFAVAGRHSEALAIYHHIIEVGISPDVITYTTLMKAFIRAK
Sbjct: 421 LMEAEGIEPNLVMLNVLINAFAVAGRHSEALAIYHHIIEVGISPDVITYTTLMKAFIRAK 480

Query: 481 KFAKVPEIYKEMESAGCTPDRKAREMLKSVTAILEQRH 519
           KF+KVPEIYKEMESAGCTPDRKAREMLKSVTA+LEQRH
Sbjct: 481 KFSKVPEIYKEMESAGCTPDRKAREMLKSVTAVLEQRH 517

[Close]

BLAST of CsaV3_4G004450 vs. ExPASy TrEMBL
Match: A0A6J1E3F2 (pentatricopeptide repeat-containing protein At5g42310, chloroplastic-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111430464 PE=4 SV=1)

HSP 1 Score: 901.7 bits (2329), Expect = 1.4e-258
Identity = 447/516 (86.63%), Postives = 474/516 (91.86%), Query Frame = 0


Query: 3   MHSIFLPKAFIVSSFGGVFSDHLLQRGSSKCDGKYMFDGGIVKLFRNNSLNFASKAVVDD 62
           M SIFLPK FIV SFGGV+S  LL R SSKCDG+YMF   ++KLFR N L   SKA + D
Sbjct: 1   MQSIFLPKTFIVYSFGGVYSGTLLHRSSSKCDGRYMFGDAVLKLFRKNGLKKVSKAALYD 60

Query: 63  NCIISSRWHGCIDEEELSSESCNRLIRDYCKVGDVDSAMSLLAHMESVGLHATMTSYTYL 122
           N  IS+RWHGC D+EELS + CN LIRDYCKVG+VD+AMSLL+HME+VGLHA++ SYTYL
Sbjct: 61  NYTISARWHGCKDQEELSGDLCNCLIRDYCKVGNVDAAMSLLSHMEAVGLHASVASYTYL 120

Query: 123 IEALGNVGRTLEADIIFQEMISFGCKPRTVVCNALLRGFLRKGLLDLASGVFVLMSDLDI 182
           IEA GNVGRTLEADI+FQEMISFG  PRT VCNALLRGFLRKGLLDLAS V VLMSDLDI
Sbjct: 121 IEAHGNVGRTLEADILFQEMISFGRMPRTTVCNALLRGFLRKGLLDLASDVLVLMSDLDI 180

Query: 183 KKNQETYEILLDYHVNAGRLEDTWSIINEMKRKGFELNSFVYSKVIVIYQNNGMWKKAVG 242
           +KNQETYEILLDYH NAGRLEDTWSIINEMKRKGFELNSFVYSKVIVIYQNNGMWKKAVG
Sbjct: 181 QKNQETYEILLDYHANAGRLEDTWSIINEMKRKGFELNSFVYSKVIVIYQNNGMWKKAVG 240

Query: 243 IVDEIRKSGISMDKHIYNSIIDTFGKYGHLSEALEVFKRMQQDGVVPDITTWNSLIQWNC 302
           IVDEIRKSGIS+DKHIYNSIIDTFGKYG L EALEVFK+MQQDGV+PDITTWNSLIQWNC
Sbjct: 241 IVDEIRKSGISVDKHIYNSIIDTFGKYGQLPEALEVFKKMQQDGVMPDITTWNSLIQWNC 300

Query: 303 KSGNLATALELFTDMQEQGMHPDPKIFITLISFLGEQGKWDVINQNLDSMKLRGHKNSVL 362
           KSGNLATALELFTDMQEQGMHPDPKIFITLIS LGEQGKWD+I +NLDSMKLRGHKNS L
Sbjct: 301 KSGNLATALELFTDMQEQGMHPDPKIFITLISSLGEQGKWDIIKKNLDSMKLRGHKNSGL 360

Query: 363 VYEILVDIYGQYGQFQDAEKCISALKSAGLLASCSNFCIIANAFAQQGLCEETVKVLQLM 422
           VYEILVDIYGQYGQF+DAEKCISALKSAGLL S SNFCIIANAFA+QGLCEETVKVLQLM
Sbjct: 361 VYEILVDIYGQYGQFRDAEKCISALKSAGLLPSASNFCIIANAFARQGLCEETVKVLQLM 420

Query: 423 EAEGIEPNLVMLNVLINAFAVAGRHSEALAIYHHIIEVGISPDVITYTTLMKAFIRAKKF 482
           EAEGIEPNLVMLNVLINAFAVAGRH EA+AIYHHI+EVGISPDVITYTTLMKA+IRAKKF
Sbjct: 421 EAEGIEPNLVMLNVLINAFAVAGRHLEAMAIYHHIVEVGISPDVITYTTLMKAYIRAKKF 480

Query: 483 AKVPEIYKEMESAGCTPDRKAREMLKSVTAILEQRH 519
            KVPEIYKEME AGCTPDRKAREMLKSVT +LEQRH
Sbjct: 481 HKVPEIYKEMERAGCTPDRKAREMLKSVTVVLEQRH 516

[Close]

BLAST of CsaV3_4G004450 vs. TAIR 10
Match: AT5G42310.1 (Pentatricopeptide repeat (PPR-like) superfamily protein )

HSP 1 Score: 350.1 bits (897), Expect = 3.0e-96
Identity = 175/442 (39.59%), Postives = 271/442 (61.31%), Query Frame = 0


Query: 75  DEEELSSESCNRLIRDYCKVGDVDSAMSLLAHMESVGLHATMTSYTYLIEALGNVGRTLE 134
           D+ EL  +  N +I  + K GD   A+ LL   ++ GL A   +   +I AL + GRTLE
Sbjct: 263 DKLELDVQLVNDIIMGFAKSGDPSKALQLLGMAQATGLSAKTATLVSIISALADSGRTLE 322

Query: 135 ADIIFQEMISFGCKPRTVVCNALLRGFLRKGLLDLASGVFVLMSDLDIKKNQETYEILLD 194
           A+ +F+E+   G KPRT   NALL+G+++ G L  A  +   M    +  ++ TY +L+D
Sbjct: 323 AEALFEELRQSGIKPRTRAYNALLKGYVKTGPLKDAESMVSEMEKRGVSPDEHTYSLLID 382

Query: 195 YHVNAGRLEDTWSIINEMKRKGFELNSFVYSKVIVIYQNNGMWKKAVGIVDEIRKSGISM 254
            +VNAGR E    ++ EM+    + NSFV+S+++  +++ G W+K   ++ E++  G+  
Sbjct: 383 AYVNAGRWESARIVLKEMEAGDVQPNSFVFSRLLAGFRDRGEWQKTFQVLKEMKSIGVKP 442

Query: 255 DKHIYNSIIDTFGKYGHLSEALEVFKRMQQDGVVPDITTWNSLIQWNCKSGNLATALELF 314
           D+  YN +IDTFGK+  L  A+  F RM  +G+ PD  TWN+LI  +CK G    A E+F
Sbjct: 443 DRQFYNVVIDTFGKFNCLDHAMTTFDRMLSEGIEPDRVTWNTLIDCHCKHGRHIVAEEMF 502

Query: 315 TDMQEQGMHPDPKIFITLISFLGEQGKWDVINQNLDSMKLRGHKNSVLVYEILVDIYGQY 374
             M+ +G  P    +  +I+  G+Q +WD + + L  MK +G   +V+ +  LVD+YG+ 
Sbjct: 503 EAMERRGCLPCATTYNIMINSYGDQERWDDMKRLLGKMKSQGILPNVVTHTTLVDVYGKS 562

Query: 375 GQFQDAEKCISALKSAGLLASCSNFCIIANAFAQQGLCEETVKVLQLMEAEGIEPNLVML 434
           G+F DA +C+  +KS GL  S + +  + NA+AQ+GL E+ V   ++M ++G++P+L+ L
Sbjct: 563 GRFNDAIECLEEMKSVGLKPSSTMYNALINAYAQRGLSEQAVNAFRVMTSDGLKPSLLAL 622

Query: 435 NVLINAFAVAGRHSEALAIYHHIIEVGISPDVITYTTLMKAFIRAKKFAKVPEIYKEMES 494
           N LINAF    R +EA A+  ++ E G+ PDV+TYTTLMKA IR  KF KVP +Y+EM  
Sbjct: 623 NSLINAFGEDRRDAEAFAVLQYMKENGVKPDVVTYTTLMKALIRVDKFQKVPVVYEEMIM 682

Query: 495 AGCTPDRKAREMLKSVTAILEQ 517
           +GC PDRKAR ML+S    ++Q
Sbjct: 683 SGCKPDRKARSMLRSALRYMKQ 704

[Close]

BLAST of CsaV3_4G004450 vs. TAIR 10
Match: AT5G36300.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 229.9 bits (585), Expect = 4.5e-60
Identity = 149/388 (38.40%), Postives = 189/388 (48.71%), Query Frame = 0


Query: 101 MSLLAHMESVGLHATMTSYTYLIEALGNVGRTLEADIIFQEMISFGCKPRTVV--CNALL 160
           MSLLA + S+G      SY   IE L ++ RTLEAD +F E++ F       V   NAL+
Sbjct: 1   MSLLAEIHSLGSRPDPLSYVSFIETLASLRRTLEADALFHEVVRFMIYGSYSVRLYNALV 60

Query: 161 RGFLRKGLLDLASGVFVLMSDLDIKKNQETYEILLDYHVNAGRLEDTWSIINEMKRKGFE 220
             +LRK                                      E +W ++NEMK++ F 
Sbjct: 61  SRYLRK--------------------------------------EVSWRVVNEMKKRKFR 120

Query: 221 LNSFVYSKVIVIYQNNGMWKKAVGIVDEIRKSGISMDKHIYNSIIDTFGKYGHLSEALEV 280
           LNSFVY K+I IY++NGMWKKA+GIV+EIR+ G+ MD  IYNS+IDTFGKYG L E L  
Sbjct: 121 LNSFVYGKIIRIYRDNGMWKKALGIVEEIREIGLPMDVEIYNSVIDTFGKYGELDEEL-- 180

Query: 281 FKRMQQDGVVPDITTWNSLIQWNCKSGNLATALELFTDMQEQGMHPDPKIFITLISFLGE 340
                                                                       
Sbjct: 181 ------------------------------------------------------------ 240

Query: 341 QGKWDVINQNLDSMKLRGHKNSVLVYEILVDIYGQYGQFQDAEKCISALKSAGLLASCSN 400
                                             Q+G F+D  + +  LKS G+  S + 
Sbjct: 241 ----------------------------------QFGSFEDIGELVGKLKSQGVAPSANL 254

Query: 401 FCIIANAFAQQGLCEETVKVLQLMEAEGIEPNLVMLNVLINAFAVAGRHSEALAIYHHII 460
           FC +ANA+AQQGLC++TVKVL++ME EGIEPNL+MLNVLINAF  AG+H EAL+IYHHI 
Sbjct: 301 FCTLANAYAQQGLCKQTVKVLKMMENEGIEPNLIMLNVLINAFGTAGKHMEALSIYHHIK 254

Query: 461 E-VGISPDVITYTTLMKAFIRAKKFAKV 486
           E V I PDV+TY+TLMKAF RAKK+  V
Sbjct: 361 ETVWIHPDVVTYSTLMKAFTRAKKYEMV 254

[Close]

BLAST of CsaV3_4G004450 vs. TAIR 10
Match: AT5G39710.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 195.3 bits (495), Expect = 1.2e-49
Identity = 112/415 (26.99%), Postives = 207/415 (49.88%), Query Frame = 0


Query: 87  LIRDYCKVGDVDSAMSLLAHMESVGLHATMTSYTYLIEALGNVGRTLE-ADIIFQEMISF 146
           +++ Y ++  +D A+S++   ++ G    + SY  +++A     R +  A+ +F+EM+  
Sbjct: 140 VVKSYSRLSLIDKALSIVHLAQAHGFMPGVLSYNAVLDATIRSKRNISFAENVFKEMLES 199

Query: 147 GCKPRTVVCNALLRGFLRKGLLDLASGVFVLMSDLDIKKNQETYEILLDYHVNAGRLEDT 206
              P     N L+RGF   G +D+A  +F  M       N  TY  L+D +    +++D 
Sbjct: 200 QVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDG 259

Query: 207 WSIINEMKRKGFELNSFVYSKVIVIYQNNGMWKKAVGIVDEIRKSGISMDKHIYNSIIDT 266
           + ++  M  KG E N   Y+ VI      G  K+   ++ E+ + G S+D+  YN++I  
Sbjct: 260 FKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKG 319

Query: 267 FGKYGHLSEALEVFKRMQQDGVVPDITTWNSLIQWNCKSGNLATALELFTDMQEQGMHPD 326
           + K G+  +AL +   M + G+ P + T+ SLI   CK+GN+  A+E    M+ +G+ P+
Sbjct: 320 YCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPN 379

Query: 327 PKIFITLISFLGEQGKWDVINQNLDSMKLRGHKNSVLVYEILVDIYGQYGQFQDAEKCIS 386
            + + TL+    ++G  +   + L  M   G   SV+ Y  L++ +   G+ +DA   + 
Sbjct: 380 ERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLE 439

Query: 387 ALKSAGLLASCSNFCIIANAFAQQGLCEETVKVLQLMEAEGIEPNLVMLNVLINAFAVAG 446
            +K  GL     ++  + + F +    +E ++V + M  +GI+P+ +  + LI  F    
Sbjct: 440 DMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQR 499

Query: 447 RHSEALAIYHHIIEVGISPDVITYTTLMKAFIRAKKFAKVPEIYKEMESAGCTPD 501
           R  EA  +Y  ++ VG+ PD  TYT L+ A+       K  +++ EM   G  PD
Sbjct: 500 RTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPD 554

[Close]

BLAST of CsaV3_4G004450 vs. TAIR 10
Match: AT1G05670.1 (Pentatricopeptide repeat (PPR-like) superfamily protein )

HSP 1 Score: 180.6 bits (457), Expect = 3.1e-45
Identity = 109/420 (25.95%), Postives = 206/420 (49.05%), Query Frame = 0


Query: 83  SCNRLIRDYCKVGDVDSAMSLLAHMESVGLHATMTSYTYLIEALGNVGRTLEADIIFQEM 142
           S + ++  YC+ G++D    L+  M+  GL      Y  +I  L  + +  EA+  F EM
Sbjct: 283 SYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEM 342

Query: 143 ISFGCKPRTVVCNALLRGFLRKGLLDLASGVFVLMSDLDIKKNQETYEILLDYHVNAGRL 202
           I  G  P TVV   L+ GF ++G +  AS  F  M   DI  +  TY  ++      G +
Sbjct: 343 IRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDM 402

Query: 203 EDTWSIINEMKRKGFELNSFVYSKVIVIYQNNGMWKKAVGIVDEIRKSGISMDKHIYNSI 262
            +   + +EM  KG E +S  ++++I  Y   G  K A  + + + ++G S +   Y ++
Sbjct: 403 VEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTL 462

Query: 263 IDTFGKYGHLSEALEVFKRMQQDGVVPDITTWNSLIQWNCKSGNLATALELFTDMQEQGM 322
           ID   K G L  A E+   M + G+ P+I T+NS++   CKSGN+  A++L  + +  G+
Sbjct: 463 IDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGL 522

Query: 323 HPDPKIFITLISFLGEQGKWDVINQNLDSMKLRGHKNSVLVYEILVDIYGQYGQFQDAEK 382
           + D   + TL+    + G+ D   + L  M  +G + +++ + +L++ +  +G  +D EK
Sbjct: 523 NADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEK 582

Query: 383 CISALKSAGLLASCSNFCIIANAFAQQGLCEETVKVLQLMEAEGIEPNLVMLNVLINAFA 442
            ++ + + G+  + + F  +   +  +   +    + + M + G+ P+      L+    
Sbjct: 583 LLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHC 642

Query: 443 VAGRHSEALAIYHHIIEVGISPDVITYTTLMKAFIRAKKFAKVPEIYKEMESAGCTPDRK 502
            A    EA  ++  +   G S  V TY+ L+K F++ KKF +  E++ +M   G   D++
Sbjct: 643 KARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLAADKE 702

[Close]

BLAST of CsaV3_4G004450 vs. TAIR 10
Match: AT1G05670.2 (Pentatricopeptide repeat (PPR-like) superfamily protein )

HSP 1 Score: 180.6 bits (457), Expect = 3.1e-45
Identity = 109/420 (25.95%), Postives = 206/420 (49.05%), Query Frame = 0


Query: 83  SCNRLIRDYCKVGDVDSAMSLLAHMESVGLHATMTSYTYLIEALGNVGRTLEADIIFQEM 142
           S + ++  YC+ G++D    L+  M+  GL      Y  +I  L  + +  EA+  F EM
Sbjct: 283 SYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEM 342

Query: 143 ISFGCKPRTVVCNALLRGFLRKGLLDLASGVFVLMSDLDIKKNQETYEILLDYHVNAGRL 202
           I  G  P TVV   L+ GF ++G +  AS  F  M   DI  +  TY  ++      G +
Sbjct: 343 IRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDM 402

Query: 203 EDTWSIINEMKRKGFELNSFVYSKVIVIYQNNGMWKKAVGIVDEIRKSGISMDKHIYNSI 262
            +   + +EM  KG E +S  ++++I  Y   G  K A  + + + ++G S +   Y ++
Sbjct: 403 VEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTL 462

Query: 263 IDTFGKYGHLSEALEVFKRMQQDGVVPDITTWNSLIQWNCKSGNLATALELFTDMQEQGM 322
           ID   K G L  A E+   M + G+ P+I T+NS++   CKSGN+  A++L  + +  G+
Sbjct: 463 IDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGL 522

Query: 323 HPDPKIFITLISFLGEQGKWDVINQNLDSMKLRGHKNSVLVYEILVDIYGQYGQFQDAEK 382
           + D   + TL+    + G+ D   + L  M  +G + +++ + +L++ +  +G  +D EK
Sbjct: 523 NADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEK 582

Query: 383 CISALKSAGLLASCSNFCIIANAFAQQGLCEETVKVLQLMEAEGIEPNLVMLNVLINAFA 442
            ++ + + G+  + + F  +   +  +   +    + + M + G+ P+      L+    
Sbjct: 583 LLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHC 642

Query: 443 VAGRHSEALAIYHHIIEVGISPDVITYTTLMKAFIRAKKFAKVPEIYKEMESAGCTPDRK 502
            A    EA  ++  +   G S  V TY+ L+K F++ KKF +  E++ +M   G   D++
Sbjct: 643 KARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLAADKE 702

The following BLAST results are available for this feature:

BLAST of CsaV3_4G004450 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_011653107.1	3.6e-301	100.00	pentatricopeptide repeat-containing protein At5g42310, chloroplastic isoform X1 ...	[more]
KAA0044695.1	4.1e-281	94.79	pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa]	[more]
XP_016901588.1	3.5e-280	94.40	PREDICTED: pentatricopeptide repeat-containing protein At5g42310, mitochondrial-...	[more]
XP_038901793.1	9.9e-267	89.23	pentatricopeptide repeat-containing protein At5g42310, chloroplastic-like isofor...	[more]
XP_038901745.1	1.9e-265	89.19	pentatricopeptide repeat-containing protein At5g42310, chloroplastic-like isofor...	[more]

BLAST of CsaV3_4G004450 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8L844	4.2e-95	39.59	Pentatricopeptide repeat-containing protein At5g42310, chloroplastic OS=Arabidop...	[more]
A0A1D6IEG9	7.5e-92	40.57	Pentatricopeptide repeat-containing protein CRP1, chloroplastic OS=Zea mays OX=4...	[more]
Q84ZD2	2.8e-91	40.00	Pentatricopeptide repeat-containing protein CRP1 homolog, chloroplastic OS=Oryza...	[more]
Q9FFZ2	4.7e-78	41.67	Putative pentatricopeptide repeat-containing protein At5g36300 OS=Arabidopsis th...	[more]
Q9FIX3	1.7e-48	26.99	Pentatricopeptide repeat-containing protein At5g39710 OS=Arabidopsis thaliana OX...	[more]

BLAST of CsaV3_4G004450 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KZ91	1.7e-301	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G025700 PE=4 SV=1	[more]
A0A5A7TTI3	2.0e-281	94.79	Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946...	[more]
A0A1S4E032	1.7e-280	94.40	pentatricopeptide repeat-containing protein At5g42310, mitochondrial-like OS=Cuc...	[more]
A0A5D3CY36	1.7e-280	94.40	Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946...	[more]
A0A6J1E3F2	1.4e-258	86.63	pentatricopeptide repeat-containing protein At5g42310, chloroplastic-like isofor...	[more]

BLAST of CsaV3_4G004450 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G42310.1	3.0e-96	39.59	Pentatricopeptide repeat (PPR-like) superfamily protein	[more]
AT5G36300.1	4.5e-60	38.40	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT5G39710.1	1.2e-49	26.99	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT1G05670.1	3.1e-45	25.95	Pentatricopeptide repeat (PPR-like) superfamily protein	[more]
AT1G05670.2	3.1e-45	25.95	Pentatricopeptide repeat (PPR-like) superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 319..392 e-value: 1.8E-6 score: 29.6 coord: 248..318 e-value: 3.8E-19 score: 70.9
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 397..516 e-value: 3.1E-25 score: 90.6
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 79..247 e-value: 3.3E-36 score: 127.2
IPR002885	Pentatricopeptide repeat	PFAM	PF13041	PPR_2	coord: 185..228 e-value: 7.7E-8 score: 32.4 coord: 289..333 e-value: 1.1E-9 score: 38.3 coord: 429..477 e-value: 1.6E-9 score: 37.8
IPR002885	Pentatricopeptide repeat	PFAM	PF01535	PPR	coord: 152..180 e-value: 0.027 score: 14.7 coord: 258..287 e-value: 9.6E-7 score: 28.6 coord: 401..427 e-value: 0.42 score: 11.0
IPR002885	Pentatricopeptide repeat	TIGRFAM	TIGR00756	TIGR00756	coord: 467..500 e-value: 5.8E-9 score: 33.6 coord: 399..430 e-value: 4.6E-4 score: 18.2 coord: 223..255 e-value: 0.0018 score: 16.3 coord: 293..325 e-value: 1.0E-6 score: 26.5 coord: 118..149 e-value: 4.8E-5 score: 21.3 coord: 152..184 e-value: 0.0012 score: 16.9 coord: 258..291 e-value: 1.1E-9 score: 35.8 coord: 433..466 e-value: 6.1E-6 score: 24.1 coord: 188..220 e-value: 1.5E-6 score: 26.0
IPR002885	Pentatricopeptide repeat	PFAM	PF13812	PPR_3	coord: 83..128 e-value: 4.1E-4 score: 20.4
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 395..429 score: 8.70333
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 430..464 score: 10.435215
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 115..149 score: 10.358486
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 290..324 score: 12.375365
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 80..114 score: 10.117337
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 465..499 score: 12.013642
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 255..289 score: 12.92343
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 220..254 score: 9.218511
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 185..219 score: 10.446177
None	No IPR available	PANTHER	PTHR47942:SF13	OS06G0710800 PROTEIN	coord: 48..519
None	No IPR available	PANTHER	PTHR47942	TETRATRICOPEPTIDE REPEAT (TPR)-LIKE SUPERFAMILY PROTEIN-RELATED	coord: 48..519

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsaV3_4G004450.1	CsaV3_4G004450.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0005515	protein binding