Tan0018310.1 (mRNA) Snake gourd v1
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Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGAAAGGTAAGGGTTTCGTGGGAGAAGCTTTAAGGAAGAGGAAGAAGGTTGTTTTGGTGCTGGAATTGCAGAAGTTGGGGGAGGTGAACTCAAAGTTTGATTATTTAGCAGCAAGGTGAGCAACTCCAATCCTATTCTGGTTTTCTGTTCATCTCGAGCTCCACAGGAAGAGGTAAGATTTGAAATTTTGTTTCATGAAAGTTAACTCATATTGGAACACAATTCGTGAAGGATGCTCGAGCAAATTCGGATCTTAAGCTACTGATTTGTGAAAAGGAAGACAGAACACAGAATTTACTGTCAAATCCGAGAAGTCTCTGATGTTTTGGTTGTACTGACCTGTAGAGTTGGAATCCGAAGCTCTATTAGGTATGGTTGGAAATCTTATTGAATTTCCTACAACTTTCGTGAAGAATTCGTGAATAGAAAATGACTGGAAAATGTTGTAAATAGCAGGTCAAGTTTCGGGTTGCAGCAGAACATCGAATCTGGAATAGCAGAAGTTGGTTCCTGGGAAAGAAGACTTCGAGGTATTTCTGAACCAATCTATTGGGAATCTCATTTTCATGTCTTCATACGAGTTTTAGAGGGTTCAAAAAGGAAGAGTTTGGTATAAAGTACATTATTTTTGGATAAGTAATGAAGAAGTTATGAGTATCTGAATACAGGGCATAAAATCTGTTAAATGCTGGAATTTTTGAAAGTGTGTTTTCTTGTAAGTTTAAGGTTAAAAACCATGAGCTCGAGGTTCTAAAACATGGTTTTGGTTTGTTTGACAGGCCAGGAACAAAAGGTCGAGTGTACGGGTCAAGACTTTAGTTCTAACACTGTGAGTGACAAAACGAACCTTGAAAATGGTTTATAGGCTTGTATTATGCTTATGAAATGCAAGGTTTTGCTAAAACGAAATGGTTTAGATGTTTATTGTTTTCTTGAACACTTGTTTATGAGCATTCATGATTTCTTAGAAATGTTTTAAAGTGTTCATGATGAGCCTAAAAGTCTTTATAAAGTTTATACATGAGCATATGTCCAATGGTTGCCAAAACTTATGAAAATGTGATGATTTCAAGCAAGCATGTACTAGCAAGTATGTTTTAAAGATTTCTAGTTTTATGAACAAGCTAAGTAAGCTTGAGTTTTATGAAAGAAAAAGATAAGCTGGCATGTTCAAATGTTTTCATGTGATCTTCTGAGATATTGAGCCCGAGGTTATGTAGTACCGTGTGCACACAGGTCTTATTCTTTTGTCGACGTTGAGTGTACTCCGTGACAACAGCGCTGTCGTGAGTGCTGGGCGGGCCCCACTACGACAAAGACGATGGGAGTGCTGGGCGGGCCCCACTACATCGTAGATGAAAGGTAAGGGTTTCGTGGGAGAAGCTTTAAGGAAGAGGAAGAAGTTGGTTCCTGGGAAAGAAGACTTCGAGGTATTTCTGAACCAATCTATTGGGAATCTCATTTTCATGTCTTCATACGATGTACTCCGTGACAACAGCGCTGTCGTGAGTGCTGGGCGGGCCCCACTACGACAAAGACGATGGGAGTGCTGGGCGGGCCCCACTACATCGTAG ATGAAAGGTAAGGGTTTCGTGGGAGAAGCTTTAAGGAAGAGGAAGAAGTTGGTTCCTGGGAAAGAAGACTTCGAGGTATTTCTGAACCAATCTATTGGGAATCTCATTTTCATGTCTTCATACGATGTACTCCGTGACAACAGCGCTGTCGTGAGTGCTGGGCGGGCCCCACTACGACAAAGACGATGGGAGTGCTGGGCGGGCCCCACTACATCGTAG MKGKGFVGEALRKRKKLVPGKEDFEVFLNQSIGNLIFMSSYDVLRDNSAVVSAGRAPLRQRRWECWAGPTTS Homology
BLAST of Tan0018310.1 vs. NCBI nr
Match: KAA0033241.1 (hypothetical protein E6C27_scaffold845G00350 [Cucumis melo var. makuwa] >TYK20418.1 hypothetical protein E5676_scaffold590G00130 [Cucumis melo var. makuwa]) HSP 1 Score: 60.8 bits (146), Expect = 5.4e-06 Identity = 25/37 (67.57%), Postives = 31/37 (83.78%), Query Frame = 0
BLAST of Tan0018310.1 vs. NCBI nr
Match: KAA0037581.1 (reverse transcriptase [Cucumis melo var. makuwa]) HSP 1 Score: 57.4 bits (137), Expect = 6.0e-05 Identity = 26/35 (74.29%), Postives = 29/35 (82.86%), Query Frame = 0
BLAST of Tan0018310.1 vs. NCBI nr
Match: TYK03091.1 (reverse transcriptase [Cucumis melo var. makuwa]) HSP 1 Score: 57.4 bits (137), Expect = 6.0e-05 Identity = 26/35 (74.29%), Postives = 29/35 (82.86%), Query Frame = 0
BLAST of Tan0018310.1 vs. NCBI nr
Match: KAA0040296.1 (hypothetical protein E6C27_scaffold2379G00310 [Cucumis melo var. makuwa]) HSP 1 Score: 56.2 bits (134), Expect = 1.3e-04 Identity = 25/35 (71.43%), Postives = 28/35 (80.00%), Query Frame = 0
BLAST of Tan0018310.1 vs. NCBI nr
Match: TYK27262.1 (hypothetical protein E5676_scaffold244G00290 [Cucumis melo var. makuwa]) HSP 1 Score: 55.8 bits (133), Expect = 1.7e-04 Identity = 25/35 (71.43%), Postives = 28/35 (80.00%), Query Frame = 0
BLAST of Tan0018310.1 vs. ExPASy TrEMBL
Match: A0A5A7SUV2 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold590G00130 PE=4 SV=1) HSP 1 Score: 60.8 bits (146), Expect = 2.6e-06 Identity = 25/37 (67.57%), Postives = 31/37 (83.78%), Query Frame = 0
BLAST of Tan0018310.1 vs. ExPASy TrEMBL
Match: A0A5D3BTP3 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold374G00020 PE=4 SV=1) HSP 1 Score: 57.4 bits (137), Expect = 2.9e-05 Identity = 26/35 (74.29%), Postives = 29/35 (82.86%), Query Frame = 0
BLAST of Tan0018310.1 vs. ExPASy TrEMBL
Match: A0A5A7T7M6 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold277G002250 PE=4 SV=1) HSP 1 Score: 57.4 bits (137), Expect = 2.9e-05 Identity = 26/35 (74.29%), Postives = 29/35 (82.86%), Query Frame = 0
BLAST of Tan0018310.1 vs. ExPASy TrEMBL
Match: A0A5A7TDY3 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold2379G00310 PE=4 SV=1) HSP 1 Score: 56.2 bits (134), Expect = 6.4e-05 Identity = 25/35 (71.43%), Postives = 28/35 (80.00%), Query Frame = 0
BLAST of Tan0018310.1 vs. ExPASy TrEMBL
Match: A0A5D3DUS7 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold244G00290 PE=4 SV=1) HSP 1 Score: 55.8 bits (133), Expect = 8.4e-05 Identity = 25/35 (71.43%), Postives = 28/35 (80.00%), Query Frame = 0
The following BLAST results are available for this feature:
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
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