Tan0016100.1 (mRNA) Snake gourd v1

Overview


Name	Tan0016100.1
Type	mRNA
Organism	Trichosanthes anguina (Snake gourd v1)
Description	ribosomal RNA small subunit methyltransferase NEP1
Location	LG03: 788737 .. 796670 (-)
Sequence length	1469
RNA-Seq Expression	Tan0016100.1
Synteny	Tan0016100.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TAAAGATAAATAAATAGAAGGATTTGGAAACCCTAAACACTTCGATCATCCTCTCAGTCTCGCGTGCTCACCTTCTTCTTTACGTCGGCTCCTCCTCCCTCTCTCTCCGGTTCCGCCAGTGCCGTCGCAGCCTCCTTTAGCAGTTTTCACTGATTCTCTACTCTGTTGTTGGTACGGTATTCTCCCAATCTTCATCTATGTGTTTCTTCTCACTCGAAAAAAATGAAAATTTGGCTTTGTCTAATAAAAGAATGAAGGAGTTGCTTTGATTTTTTTTAATTTTTTTATTACAATAGCAGAATAGCAACGAGGAACTACCATCTGCCTTTTAATTTATTGCATATGTATTTCAATTGGGGGTTTGATCGTCCACCATAAATTTTCCTGCATCTCCATCTTTCTAGTAGTCTATTGCATACCAATTTATTACATAGTTTTTATAAATTGGTTAAACAATCTGTTAATTGATTGATAATTGGTTGATGTACAGTTGTAATTAGTTTCACTCCTCTCTTTCTGCTATTTTTGCTATTTTCTTCATGATCTTTTTCTGCTATTTTCGCTAACAAACAAAGAGTCACAGATATTAGAATTAAAATAGTCTAGCCAAATTTCTTTTGAAAACTTAGACCTCCATGGTTGGTTGTTTCTGCCTCCTTCTTGCAGAGCACACACCACAGTCAATGTAAATCCTTCGATGTTAAAAGTGGAGGCTCTCTATCCCATTCTCTTCTAATCCCTAGCTTATAGGGAGTTGGTTTGATTGACACAACAACCTCTACCATATTTATATTTCTAGATTATAGTTGTGAAGAAAGACCAAGAGTTTTTTTTTCAATAAGCATCATTTGTGTATATGCTTTGTACTGGAAAATGTTTATGGTAAAATTGACATACATTAAAAAATGGAAGTGATCTAAAGATTCTTCTTTTATAGCCCACTTTTATATATATATATATATAGCTCAAGTGCTCAACATACATAAAGTATGTGCTTATGACCAAGAGGTCATGGGTTTGAAACTCCCACTCCTTCTTTTTTTTATATTCATTTACTTACCTTCTAAAAATGTTATCAAAATCCAAGCTAATTTTTCATAACATATTAGAAAAGTAATTTCCAAAAAGTAGATCATATGTGTTTTTAACTAAGTGAGAAACATACCAAATTAATGATTCGGATGCAAGCTAATTTTAGGATATAGAAAATTAAAAAAAAAATTAGTATCGAATCTAGCCTCAATATTTCGAAATTTTATTCAAATATCTCGAATTACTAAGACAAATGTTTGAAAATGATGGAGTACTTACAACATGAGAATTTGAGGCGAAATTGTATTTGCAATCTCTCTCTATACTTAGAACATGTATCATAAGCATCATAAGACAACATTAAAAATTATTCTTGTGATTAAATATAAAATGTTTATAATGTTGTTTAAATGGTTAGATACTTATGTTGATACCTGAATTTGGACAGTTGGATCAACGGTAAATTTGTATTATCGGGAACAGTGAATACCTGCAAAACAAAGAACTAACATCGGTGTGGTGCTATGCCATACACACACCGACGCTCAAGCTAGAAATGTGAACTTTCTTTAGCGAATTGAGACACAAGCTAGAACACAGGAAATGATTGCTTACCTTTTCCATCGCGCCTCTAGAGATTATATAACTGTGTCACTTATAACGGTTAATAGAGGTTTTACCATTAGCTAACCCATTATGATCGTCAAGCCTTAATCACAATCGTTATTTGAGTGGGAGTGTTTTGCAACTTCTCCTCTCTCCTCGTACGTTTAGGATCCCAACTGCATGTTCCCTCTAGTTGACTCCCCTCATCTTGTGATACTCCTTTAAGGTCCCCTATATTCTTATCTTAACTTAAATATTCCCTTCTTTTCAGATATGCCTTCACAATTTAGGGCCATGGAGCACGAGTTGGAGATACCATCTGAGAGTTCAGACTCTGAGCCTGCGGAGATTGCCCCTATGGCTACATCTCCCATTAGAAACGTGGGCCTCGATCAACGACCCACCCGACGTCCAAGGCCCACCCGACGTCCATGCACACGAGCATTTCCACCTCGTTCCAGTTTCCAACCGCTTCTTGATCCAGATTTCTCTTCAATTCCAACATTTCCTACCACTCATCTCGTGAGCGGAATTGGTTACAACGCTGCCCCTTCACTGAGAGGATCCAACCAAAGGGCTGCCCTTCCTTTAGACTACACTAGACCTTACCGATCTCCCGTAGACGAGGTTGCTGAGATGGAAGAGACTTTTGCTGCATGGGATAGATTTTTTGATAACAACTCTTCCCATGAGAATGTCAATCGACGATGCGACTTTCAAGATCCTCAACTTGCCATCTCCGTTGCCAATCAGCACCTCCACAAGGTAAAACACCTATCTCCCCCTCATACTCGTTTCACATCAATTATTAACCTTTGCATACATATCTTGTGCACAGGCCCTTTGTCACATGGCCACCGTTTCACGTCAAATGTCTGGGGAACTCACTCACCTTCAGCAAAATCATGCCTCTAGAGAGGAATTGGAGCAGACTCGCCTTTTACATGCTCAGGCGACCCAGACTCTGCAAACTGCGCAAGAGAGACTTGAATCACTCCAAGTTGAACACGACTCCCTTCGGACTGAGTACCATAACTACCGGTCTCAGACTGAGATTGACATATCCGCCCTCCAACTTAAACTGAAGGAAGCTGAAGATAAACTTAATGACTCCGAGTATCTGACCGAAGCATTCAAACTTTCTGAGGAATATCTCGACTTCCAAAACCAAGCTATGCGTTGTGGAGTAAACTGGTCAATTCGGACTGCTAGGGAACGTCAACCTAGTACAGACTTGAGATGGCTCAAATCTGCTTTCAGGGAATATTGCAATTTTCCTGAATTTGGACACCCCTCTGGAACCGAAAATCAAGAAGTCACCGGTCAAAAAACGTAATCTTGAGAGAATTTTCTTAGTGACATTCCTTTAGATGACGAACTCGGATCCTAGATCTATGACCCTCATGTACTCTTGTATTGTTTTTTATTTTTTTTTTATGAGAAACATCTAGATCATTTCATTGATGGTATGAAATGTACAAAAGAAAGGGTATGTCAACCTTAGCCAACTCTTGTATTGTCTCGTTTCGTATGAAATCAAATTGCATTTCCTTAGCCAACTCTTATGTTCTTATCCCCCACTCACACAATTTGATGATAAACAAATAGTTTGAGTAGAAAAGTATGATCATTAATATGAAAACTAGAAAATACATTTTGATTTGTATTCAAACAAACAACAAATATAATTTATTGAAAATAAATATTTAGATGCTCAATGTTCTATGGGCGAGACATTCGTTTTCTAGTGAGGTCTGGCATCTCATAAGTGCTTGGGCGAATGACCCTCGTAACTTTGTACGAACCTTCCCAAGTGCGAGCGTCCTCGAACATTGTGGGCCAATAATAACTCTATTGCATCACCTTTTGTGCAAGAGACCGAGCCTCGAGGCGACCCCAGGGGGTCAACCTCTCGAGCTGGCGAACTTCGGTCTACCCCTTGGGGCCTACGCAGAGTGGCTCGAGGCCGACAAGCCCCGGTCGATCCCTTGGGGTCAGCATCCCAGGCCAGTGAGGTTGGGTTGTCCCCACTCGAGACCTACCCTATGGGGTTAGTTTCTTGGGTCACACGTGTTTGAGTCTAGGAACCTGGCCATCTCCATTGGGATCAACCTATAGGTCTAATTGCGCCTCCAAGCATCCCATTCTTACCCATAACAACTTACAAACTTTGGATGCTTCATTTTTTCAAATTCAAAGAATTCTTCTTTTGACTGAATGTTCTTATTCTTGTCGTTCATAATTTTCTTTTGCTATGCAACTTTCAACCAATTTGATACAAAAGAAAAACAACAATTGTATTTTGTTGACACGAATTTCCAAATGTAATGCAAGCCAATTAAAAATTAAACTAAAACAAAGGTTAAAAAACCATAAAATTGGTGAATAATAAAAATAATCTGAATATAATCTGAAAAAATCTATGGGAGGAATCATACTTGTGTTTTAAGAGAAATTGAGATATCGAACAAAAATAGGCAAAGTATAGAAAACCCTTGTTGTAGAAAAAAGGGGGTGAAAGTGAAATTATTACACACGTGTAGGAAATCAAGAAGTCATAAAACTTTTTGAATTTTCAAAATCTTTGAAATTTTGTTATTAATTAAATGTAATTAATGGGAGAAAAAAAAGTAGAATTTTGGAGGAGGGTGTGAGTATCATAAATGATTGATTATTAATTAATGTAACATATATCTTAAAAAGGAAAAGAAAAACTCTAAAGATTAAATGATTAGATGGGAGGGTCTTGTATTCACAAACGCTTTGTAACTTTCTCTAACTCCGTTTTCTAAAATTGTTCTCTAGAAGTGGGAGTGGAGGTTGGGTGATACGACCGTTGTGCCACCGACGACCCTTGTTCAAGTTGGCTTACTTGTTCGAGCGAGAACAAGTGCTGCACGATCTCTTCGTGATACTTGGAGAAGTGCGATTGTGACACATGGCATGGTGTAGATTTCATGTGTTGGACTAGACTTGCATATTACTTGTTTATGTATATTGAGCATGTTGCTTGTGTTATCTGTTTTAAAGAGCATATTTGATGCGTGTGAAAAACATGATGTTTGCTTTGTTTGTTGTTTGGTGGGTCACCAAGTGTGAGAAACTTGCTGAGTAATTTTGGTGGCTCACCAAGTGTGATACAACCGTTGTACCCTTTTTTGGCTTACTTGTTTGAGCGAGAACAAGTGCCGCACGACCACTTCGTGATCCTTAGAGAAGTGCGATCGTGACACATGGCATGGTGCATATTTCATGTGTTGGACTAGTCTTGCATATTACTTGTTTATGTAGATTGAGCATGTTACTTGTGTTATCTGCTTTAAAGAGCAAATTGGATGCGTGTGAAAAACATGATGTTTGCTTTGTTTGTTGTTTGGTGGTTGTGGCTCACTAAGTGTGAGCTACTTACTCAGTAATTTTGTATGGAGTCCCCCCTCCCAACAAGCAGTTTTGCAGGTTTCAAGTCTTTATGACCTTGGTGATGCAGAGGAGATGTTGGAGGGAGACCATTGCTTAGCTAGTTTTAGTACTTTTAGCTATTCCTTGATTCTCTTAGCTAGTCATTCTATTCTCTCGATAGTTGGTTTTAGTTTGGAAACTTACGTACGTGAAAGGAGAGCTGTTATTTCCTTTAGTAGCTATTTTATTTATCAAATCTTGAGCTTAGGTTGTGATATGGATGATGTAGTTTATTTCTTTGATTCTTGAGGTTGTTTCTGATTAGAAAGTTCAGTAAAGTTTAGTTTTGTCTGAAGTTGAGCTGGTTTATTGTTTACTTGTTTTAGTTTGGAGGATGTTGTGCTGTTTTTGGATATGGAAGTGTGTTATCCTTGTCTAACAGGTGTAAGGAAAAAAAGGGTAGCTTGTAGTTGTTTTGTCATGTATGTTAAAATTTTTGGGACACTACAGTTTAGTTTGTCTATGGTGTCGGTCTCTATGTTAAGTAAGTAGAAAAGGTTTTTAATGTTCCCTAAATTAGGTTGAAATTTTGGGGTGTTACCTCCTCACCCCTCTTCGGAGCTTGAGGCCAAAAAATACAATGGTTCGACCATTTGCGGTGAAGGGGAAGAAAAGAAAGAAGACTGAGAAATACGACAGAGACAATGGCGACGGAGAATCAACCACACCGACCAAGAAGCCTATGGTGGAGAAGGAACCTGAACCTGATGAAGAAGAACTAGTGAATGAAGCAGCAAAACAAGACTTCCACGAGCTTGAAGGTATTCCAATTATTCCAAGAGACCCCAAAAGCGATAACAATGCTGGTGTTATCTTTGTCCTCGAGAGAGCTTCTTTGGAGGTCGCCAAAGTTGGGAAGGTAGGTATCTTATAGATGTATGGTTTTGATTTTCTGCTTAGGAGTTTTAGGATTTCATTCAATTAAGCTGTTTTTCTGTGCTTTGTTAATGTTTTTGCGAAGTTTATGCTAACTATTCATTTTCCATTCTTTCTTTGTTTTTTTTTTAATGGACTTCAATGTTTCGTGCATATAGAACTACCAGCTATTGAATTCTGATGACCACTCCAATTTTTTGCGGAGAAATAACAGAAATCCGGGGGATTACAGACCTGATATTTTGCATCAGGTAAGTAGTTCCCTGTTGTTTTTCCAATTGGATAGGGGATTATCTCAGGGAATTTTGTATGTTGATATTTCATATTTGAGTACCAGAAGTGATATTAAATGTAAATGATTTAGGCTCTTTTGGCGATTTTTGATAGTCGCATCGCAAAGGCTGGAAGGTTGAAAGTTGTTTATGTGAAAACTGAGAAAGGTCTATTAATTGAAATTAAACCGTATGTTCGTCTTCCAAGGACGCAGAAACGGTTCTATGGAGTTATGTGTAAGTCGATTTGCTTGTTCTCATTTGGCTGAACATTCCAATTGAGATGTCTGTTTGATAATCCTTTTCATTGGTCTTTTTCCAAATACTTTGCAGTGCAATTGCTACAGAAGTTAAGCATCACAGCTGCTGGTAAGCGTGAGAAACTTTTCCGGGTGATAAAGAATCCTGTGACTCAGTATTTACCTGCCAATTCTCGTAAGATGGGTAAGCCTGTATGTTCTTCTGTCATTTTGAGTTTTTTTGTGTTTTGGTAGGAACTTTTCATATTGTTTTCTTGTATATCAGGCTTCTCGCATAGTTCAGACAAGTTGGTCAAGATGCGGAATTATTTGGATGCTGTCAAAGATGATGTAGACCTTGTTTTTGTGGTATGTTTAAAACTCAGAACTGAAAACCCACTTTTCCATGCTTCATTTCTTTGTAGCATACGACCAACTTCCCTTTATTGCAATGTTTTAGGTGGGTGCAATGGCTCATGGCAAAATTGAGACTGGTTACACCGATGATCTTTTAGCAAGTAAGTTTGTTTTCTCTTTTCCATGTGGTTAGTTTGAGTAGTTAGATGGGAGTGAATAACTACAATAGTAATTTACTTTAACTCTGCTAGATTTTTCGAGTACTTGTGGGTGTAGACTTGTAGTGACTCATTTGCAGTATGTGATAAGAAAATTTGTGTGGAGGAAATGGGTGTGAACAGAGAGAAGTTAGAGAGACAAAGTGTATGCAGAGAAGTCTGTGGAGAAAGTGTGTATAGACAGTAATTAGGAAAAGAAAGTGTAAGACGAAGATGAAAAATTAAGGATGAAGTTAAAATATCATGAATCAATGACTTGTTACTTCTTGGTTTTGCAGAGGGCTTCTAAATTTGTAGGTAGACCTAAAACATTTGAGGAATAATTCAATCATAAACTCATTATCTTATCATAAATCTCATTCTCATGTGTGACAATTTTTCCTCTTATATATATATATTTGTGCAGTTTCTGAGTATCCTCTGAGTGCTAGTTGCTGTATTGCGGATATTTGCAAAGATTTGGCAGAGAAATGGAATGTCGGGTGAACCATGCTTACAACTCTGCATCCAGTTAAGTTTGAAAATCAGTGCCTCAACTACCTTGTTTCCTATTTTTAGGTGTTTTTTTTTTTTTGGTGAAACCCATTGAGATGAACTGTAGTGACGAATTAAACCTTACCATAGCTATATTTTGTCTAGCTAATGCTTAATCGACTAAAATTTCATGAGGCTTCTTCTAAATCTCATTGAAAGGAATAGACGACATTTATTAGTTGTTACAAGTTTGATAAGAAGTGATTGTATCAGAATTTTAGTGGATAGCGTTTGAGTTCTTGGTTGTGCGTCAGAGGATGTAACTTATGAATTCATGTCCACGATTCAATTTGATGAAATTGAGTGGGAAAAATGGATCAACCTTCCCACATTGAAGGATA

mRNA sequence

TAAAGATAAATAAATAGAAGGATTTGGAAACCCTAAACACTTCGATCATCCTCTCAGTCTCGCGTGCTCACCTTCTTCTTTACGTCGGCTCCTCCTCCCTCTCTCTCCGGTTCCGCCAGTGCCGTCGCAGCCTCCTTTAGCAGTTTTCACTGATTCTCTACTCTGTTGTTGGTTGAAATTTTGGGGTGTTACCTCCTCACCCCTCTTCGGAGCTTGAGGCCAAAAAATACAATGGTTCGACCATTTGCGGTGAAGGGGAAGAAAAGAAAGAAGACTGAGAAATACGACAGAGACAATGGCGACGGAGAATCAACCACACCGACCAAGAAGCCTATGGTGGAGAAGGAACCTGAACCTGATGAAGAAGAACTAGTGAATGAAGCAGCAAAACAAGACTTCCACGAGCTTGAAGGTATTCCAATTATTCCAAGAGACCCCAAAAGCGATAACAATGCTGGTGTTATCTTTGTCCTCGAGAGAGCTTCTTTGGAGGTCGCCAAAGTTGGGAAGAACTACCAGCTATTGAATTCTGATGACCACTCCAATTTTTTGCGGAGAAATAACAGAAATCCGGGGGATTACAGACCTGATATTTTGCATCAGGCTCTTTTGGCGATTTTTGATAGTCGCATCGCAAAGGCTGGAAGGTTGAAAGTTGTTTATGTGAAAACTGAGAAAGGTCTATTAATTGAAATTAAACCGTATGTTCGTCTTCCAAGGACGCAGAAACGGTTCTATGGAGTTATGTTGCAATTGCTACAGAAGTTAAGCATCACAGCTGCTGGTAAGCGTGAGAAACTTTTCCGGGTGATAAAGAATCCTGTGACTCAGTATTTACCTGCCAATTCTCGTAAGATGGGCTTCTCGCATAGTTCAGACAAGTTGGTCAAGATGCGGAATTATTTGGATGCTGTCAAAGATGATGTAGACCTTGTTTTTGTGGTGGGTGCAATGGCTCATGGCAAAATTGAGACTGGTTACACCGATGATCTTTTAGCAATTTCTGAGTATCCTCTGAGTGCTAGTTGCTGTATTGCGGATATTTGCAAAGATTTGGCAGAGAAATGGAATGTCGGGTGAACCATGCTTACAACTCTGCATCCAGTTAAGTTTGAAAATCAGTGCCTCAACTACCTTGTTTCCTATTTTTAGGTGTTTTTTTTTTTTTGGTGAAACCCATTGAGATGAACTGTAGTGACGAATTAAACCTTACCATAGCTATATTTTGTCTAGCTAATGCTTAATCGACTAAAATTTCATGAGGCTTCTTCTAAATCTCATTGAAAGGAATAGACGACATTTATTAGTTGTTACAAGTTTGATAAGAAGTGATTGTATCAGAATTTTAGTGGATAGCGTTTGAGTTCTTGGTTGTGCGTCAGAGGATGTAACTTATGAATTCATGTCCACGATTCAATTTGATGAAATTGAGTGGGAAAAATGGATCAACCTTCCCACATTGAAGGATA

Coding sequence (CDS)

ATGGTTCGACCATTTGCGGTGAAGGGGAAGAAAAGAAAGAAGACTGAGAAATACGACAGAGACAATGGCGACGGAGAATCAACCACACCGACCAAGAAGCCTATGGTGGAGAAGGAACCTGAACCTGATGAAGAAGAACTAGTGAATGAAGCAGCAAAACAAGACTTCCACGAGCTTGAAGGTATTCCAATTATTCCAAGAGACCCCAAAAGCGATAACAATGCTGGTGTTATCTTTGTCCTCGAGAGAGCTTCTTTGGAGGTCGCCAAAGTTGGGAAGAACTACCAGCTATTGAATTCTGATGACCACTCCAATTTTTTGCGGAGAAATAACAGAAATCCGGGGGATTACAGACCTGATATTTTGCATCAGGCTCTTTTGGCGATTTTTGATAGTCGCATCGCAAAGGCTGGAAGGTTGAAAGTTGTTTATGTGAAAACTGAGAAAGGTCTATTAATTGAAATTAAACCGTATGTTCGTCTTCCAAGGACGCAGAAACGGTTCTATGGAGTTATGTTGCAATTGCTACAGAAGTTAAGCATCACAGCTGCTGGTAAGCGTGAGAAACTTTTCCGGGTGATAAAGAATCCTGTGACTCAGTATTTACCTGCCAATTCTCGTAAGATGGGCTTCTCGCATAGTTCAGACAAGTTGGTCAAGATGCGGAATTATTTGGATGCTGTCAAAGATGATGTAGACCTTGTTTTTGTGGTGGGTGCAATGGCTCATGGCAAAATTGAGACTGGTTACACCGATGATCTTTTAGCAATTTCTGAGTATCCTCTGAGTGCTAGTTGCTGTATTGCGGATATTTGCAAAGATTTGGCAGAGAAATGGAATGTCGGGTGA

Protein sequence

MVRPFAVKGKKRKKTEKYDRDNGDGESTTPTKKPMVEKEPEPDEEELVNEAAKQDFHELEGIPIIPRDPKSDNNAGVIFVLERASLEVAKVGKNYQLLNSDDHSNFLRRNNRNPGDYRPDILHQALLAIFDSRIAKAGRLKVVYVKTEKGLLIEIKPYVRLPRTQKRFYGVMLQLLQKLSITAAGKREKLFRVIKNPVTQYLPANSRKMGFSHSSDKLVKMRNYLDAVKDDVDLVFVVGAMAHGKIETGYTDDLLAISEYPLSASCCIADICKDLAEKWNVG

Homology

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BLAST of Tan0016100.1 vs. ExPASy Swiss-Prot
Match: O35130 (Ribosomal RNA small subunit methyltransferase NEP1 OS=Mus musculus OX=10090 GN=Emg1 PE=1 SV=1)

HSP 1 Score: 186.4 bits (472), Expect = 4.4e-46
Identity = 98/205 (47.80%), Postives = 134/205 (65.37%), Query Frame = 0


Query: 77  VIFVLERASLEVAKVGKNYQLLNSDDHSNFLRRNNRNPGDYRPDILHQALLAIFDSRIAK 136
           +I VLE ASLE  KVGK Y+LLN D H + L +N R+PG+ RPDI HQ+LL + DS + +
Sbjct: 43  LIVVLEGASLETVKVGKTYELLNCDRHKSMLLKNGRDPGEVRPDITHQSLLMLMDSPLNR 102

Query: 137 AGRLKVVYVKTEKGLLIEIKPYVRLPRTQKRFYGVMLQLLQKLSITAAGKREKLFRVIKN 196
           AG L+ VY+ T+K +LIE+ P  R+PRT  RF G+M+QLL KLS+ AA   +KL +VIKN
Sbjct: 103 AGLLQ-VYIHTQKNVLIEVNPQTRIPRTFDRFCGLMVQLLHKLSVRAADGPQKLLKVIKN 162

Query: 197 PVTQYLPANSRKMGFSHSSDKLVKMRNYLDAVKDDVDLVFVVGAMAHGKIETGYTDDLLA 256
           PV+ + P    K+G S S + +  +R   + V     +VFVVGA AHGK+   YT+ +++
Sbjct: 163 PVSDHFPVGCMKIGTSFSVEDISDIR---ELVPSSDPVVFVVGAFAHGKVSVEYTEKMVS 222

Query: 257 ISEYPLSASCCIADICKDLAEKWNV 282
           IS YPLSA+   A +     E W V
Sbjct: 223 ISNYPLSAALTCAKVTTAFEEVWGV 243

[Close]

BLAST of Tan0016100.1 vs. ExPASy Swiss-Prot
Match: Q9XX15 (Ribosomal RNA small subunit methyltransferase nep-1 OS=Caenorhabditis elegans OX=6239 GN=Y39A1A.14 PE=3 SV=1)

HSP 1 Score: 184.9 bits (468), Expect = 1.3e-45
Identity = 98/202 (48.51%), Postives = 131/202 (64.85%), Query Frame = 0


Query: 80  VLERASLEVAKVGKNYQLLNSDDHSNFLRRNNRNPGDYRPDILHQALLAIFDSRIAKAGR 139
           VLE  SLE AKVG  Y +L+SD H+NFLR+  ++P DYRPDILHQ LL + DS + +AG+
Sbjct: 31  VLEGCSLETAKVGGEYAILSSDKHANFLRKQKKDPADYRPDILHQCLLNLLDSPLNRAGK 90

Query: 140 LKVVYVKTEKGLLIEIKPYVRLPRTQKRFYGVMLQLLQKLSITAAGKREKLFRVIKNPVT 199
           L+ V+ +T K +L+++ P  R+PRT  RF G+M+QLL KLSI AA   +KL  V+KNPV+
Sbjct: 91  LR-VFFRTSKNVLVDVSPQCRIPRTFDRFCGLMVQLLHKLSIRAAETTQKLMSVVKNPVS 150

Query: 200 QYLPANSRKMGFSHSSDKLVKMRNYLDAVKDDVDLVFVVGAMAHGKIETGYTDDLLAISE 259
            +LP  SRKM  S +  +L  M N L A + D  LV ++G +A GKI   Y D    IS 
Sbjct: 151 NHLPVGSRKMLMSFNVPELT-MANKLVAPETDEPLVLIIGGIARGKIVVDYNDSETKISN 210

Query: 260 YPLSASCCIADICKDLAEKWNV 282
           YPLSA+   A +   L E W +
Sbjct: 211 YPLSAALTCAKVTSGLEEIWGI 230

[Close]

BLAST of Tan0016100.1 vs. ExPASy Swiss-Prot
Match: Q92979 (Ribosomal RNA small subunit methyltransferase NEP1 OS=Homo sapiens OX=9606 GN=EMG1 PE=1 SV=4)

HSP 1 Score: 184.5 bits (467), Expect = 1.7e-45
Identity = 98/205 (47.80%), Postives = 133/205 (64.88%), Query Frame = 0


Query: 77  VIFVLERASLEVAKVGKNYQLLNSDDHSNFLRRNNRNPGDYRPDILHQALLAIFDSRIAK 136
           +I VLE ASLE  KVGK Y+LLN D H + L +N R+PG+ RPDI HQ+LL + DS + +
Sbjct: 43  LIVVLEGASLETVKVGKTYELLNCDKHKSILLKNGRDPGEARPDITHQSLLMLMDSPLNR 102

Query: 137 AGRLKVVYVKTEKGLLIEIKPYVRLPRTQKRFYGVMLQLLQKLSITAAGKREKLFRVIKN 196
           AG L+ VY+ T+K +LIE+ P  R+PRT  RF G+M+QLL KLS+ AA   +KL +VIKN
Sbjct: 103 AGLLQ-VYIHTQKNVLIEVNPQTRIPRTFDRFCGLMVQLLHKLSVRAADGPQKLLKVIKN 162

Query: 197 PVTQYLPANSRKMGFSHSSDKLVKMRNYLDAVKDDVDLVFVVGAMAHGKIETGYTDDLLA 256
           PV+ + P    K+G S S   +  +R   + V     +VFVVGA AHGK+   YT+ +++
Sbjct: 163 PVSDHFPVGCMKVGTSFSIPVVSDVR---ELVPSSDPIVFVVGAFAHGKVSVEYTEKMVS 222

Query: 257 ISEYPLSASCCIADICKDLAEKWNV 282
           IS YPLSA+   A +     E W V
Sbjct: 223 ISNYPLSAALTCAKLTTAFEEVWGV 243

[Close]

BLAST of Tan0016100.1 vs. ExPASy Swiss-Prot
Match: Q9W4J5 (Ribosomal RNA small subunit methyltransferase NEP1 OS=Drosophila melanogaster OX=7227 GN=CG3527 PE=3 SV=2)

HSP 1 Score: 181.0 bits (458), Expect = 1.8e-44
Identity = 95/210 (45.24%), Postives = 129/210 (61.43%), Query Frame = 0


Query: 77  VIFVLERASLEVAKVGKNYQLLNSDDHSNFLRRNNRNPGDYRPDILHQALLAIFDSRIAK 136
           +I VLE A LE  KV   ++LLN DDH+  +R+N R+PG  RPDI HQ LL +FDS + +
Sbjct: 43  LIIVLEGAQLETVKVHNTFELLNCDDHAGIMRKNQRDPGSCRPDITHQCLLMLFDSPLNR 102

Query: 137 AGRLKVVYVKTEKGLLIEIKPYVRLPRTQKRFYGVMLQLLQKLSITAAGKREKLFRVIKN 196
           AG L+ V+V+TE  +LIEI P  R+PRT KRF G+M+QLL K  I A     +L  VIKN
Sbjct: 103 AGLLQ-VFVRTEHNVLIEINPQTRIPRTFKRFAGLMVQLLHKFQIRANDSSRRLMSVIKN 162

Query: 197 PVTQYLPANSRKMGFSHSSDKLVKMRNYL-----DAVKDDVDLVFVVGAMAHGKIETGYT 256
           P+T ++P   +K   S S   L   R+ +      +   D  +V V+GA AHG ++T YT
Sbjct: 163 PITDHVPVGCKKYAMSFSGKLLPNCRDLVPHGDETSASYDEPVVIVIGAFAHGVLKTDYT 222

Query: 257 DDLLAISEYPLSASCCIADICKDLAEKWNV 282
           ++L +IS YPLSA+   + IC    E W V
Sbjct: 223 EELFSISNYPLSAAIACSKICSAFEEVWGV 251

[Close]

BLAST of Tan0016100.1 vs. ExPASy Swiss-Prot
Match: Q06287 (Ribosomal RNA small subunit methyltransferase NEP1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=EMG1 PE=1 SV=1)

HSP 1 Score: 178.3 bits (451), Expect = 1.2e-43
Identity = 101/251 (40.24%), Postives = 146/251 (58.17%), Query Frame = 0


Query: 44  EEELVNEAAKQDFHELEGIPIIPRDP-----KSDNNAGVIFVLERASLEVAKVGKN---- 103
           E+  V +A K    +     ++P+ P     K      +I VL  ASLE  K+  N    
Sbjct: 3   EDSRVRDALKGGDQKALPASLVPQAPPVLTSKDKITKRMIVVLAMASLETHKISSNGPGG 62

Query: 104 --YQLLNSDDHSNFLRRNNRNPGDYRPDILHQALLAIFDSRIAKAGRLKVVYVKTEKGLL 163
             Y LLN DDH   L++  R+  + RPDI HQ LL + DS I KAG+L+ VY++T +G+L
Sbjct: 63  DKYVLLNCDDHQGLLKKMGRDISEARPDITHQCLLTLLDSPINKAGKLQ-VYIQTSRGIL 122

Query: 164 IEIKPYVRLPRTQKRFYGVMLQLLQKLSITAAGKREKLFRVIKNPVTQYLPANSRKMGFS 223
           IE+ P VR+PRT KRF G+M+QLL KLSI +    EKL +VIKNP+T +LP   RK+  S
Sbjct: 123 IEVNPTVRIPRTFKRFSGLMVQLLHKLSIRSVNSEEKLLKVIKNPITDHLPTKCRKVTLS 182

Query: 224 HSSDKLVKMRNYLDAVKDDVDLVFVVGAMAHGK--IETGYTDDLLAISEYPLSASCCIAD 282
             +  ++++++Y++ + DD  +   VGAMA GK      Y D+ + +S YPLSAS   + 
Sbjct: 183 FDA-PVIRVQDYIEKLDDDESICVFVGAMARGKDNFADEYVDEKVGLSNYPLSASVACSK 242

[Close]

BLAST of Tan0016100.1 vs. NCBI nr
Match: XP_038905075.1 (ribosomal RNA small subunit methyltransferase nep-1 [Benincasa hispida])

HSP 1 Score: 497.3 bits (1279), Expect = 8.8e-137
Identity = 250/282 (88.65%), Postives = 261/282 (92.55%), Query Frame = 0


Query: 1   MVRPFAVKGKKRKKTEKYDRDNGDGESTTPTKKPMVEKEPEPDEEELVNEAAKQDFHELE 60
           MVRPFA KGKKRKK+EKYDRD+ DGEST P KKP  E EP+        E  K+DFHELE
Sbjct: 1   MVRPFAAKGKKRKKSEKYDRDDDDGESTVPAKKPTAENEPD-------EEPPKEDFHELE 60

Query: 61  GIPIIPRDPKSDNNAGVIFVLERASLEVAKVGKNYQLLNSDDHSNFLRRNNRNPGDYRPD 120
           GIPI+P+DP SD +AGVIFVLERASLEVAKVGKNYQLLNSDDHSNFLR+NNRNPGDYRPD
Sbjct: 61  GIPIVPKDPNSDKHAGVIFVLERASLEVAKVGKNYQLLNSDDHSNFLRKNNRNPGDYRPD 120

Query: 121 ILHQALLAIFDSRIAKAGRLKVVYVKTEKGLLIEIKPYVRLPRTQKRFYGVMLQLLQKLS 180
           ILHQALLAIFDSRIAKAGRLK VYVKTEKGLLIE+KPYVRLPRTQKRFYGVMLQLLQKLS
Sbjct: 121 ILHQALLAIFDSRIAKAGRLKAVYVKTEKGLLIEVKPYVRLPRTQKRFYGVMLQLLQKLS 180

Query: 181 ITAAGKREKLFRVIKNPVTQYLPANSRKMGFSHSSDKLVKMRNYLDAVKDDVDLVFVVGA 240
           ITAAGKREKLFRVIKNPVTQYLPANSRKMGFSHSSDKLVKMRNYLDAV+DDVDLVFVVGA
Sbjct: 181 ITAAGKREKLFRVIKNPVTQYLPANSRKMGFSHSSDKLVKMRNYLDAVEDDVDLVFVVGA 240

Query: 241 MAHGKIETGYTDDLLAISEYPLSASCCIADICKDLAEKWNVG 283
           MAHGKIET YTDDLLAISEYPLSASCCIADICKDLAEKWN+G
Sbjct: 241 MAHGKIETDYTDDLLAISEYPLSASCCIADICKDLAEKWNIG 275

[Close]

BLAST of Tan0016100.1 vs. NCBI nr
Match: XP_008443268.1 (PREDICTED: ribosomal RNA small subunit methyltransferase NEP1 [Cucumis melo] >KAA0053876.1 ribosomal RNA small subunit methyltransferase NEP1 [Cucumis melo var. makuwa] >TYK25528.1 ribosomal RNA small subunit methyltransferase NEP1 [Cucumis melo var. makuwa])

HSP 1 Score: 496.5 bits (1277), Expect = 1.5e-136
Identity = 252/282 (89.36%), Postives = 261/282 (92.55%), Query Frame = 0


Query: 1   MVRPFAVKGKKRKKTEKYDRDNGDGESTTPTKKPMVEKEPEPDEEELVNEAAKQDFHELE 60
           MVRPFA KGKKRKK EKYDRD    ES++P KK MVE EP+        E  K+DFHELE
Sbjct: 1   MVRPFAAKGKKRKKAEKYDRDEDGEESSSPAKKVMVENEPD-------EEPPKEDFHELE 60

Query: 61  GIPIIPRDPKSDNNAGVIFVLERASLEVAKVGKNYQLLNSDDHSNFLRRNNRNPGDYRPD 120
           GIPI+P+DPK+DNNAGVIF+LERASLEVAKVGKNYQLLNSDDHSN+LRRNNRNPGDYRPD
Sbjct: 61  GIPIVPKDPKTDNNAGVIFILERASLEVAKVGKNYQLLNSDDHSNYLRRNNRNPGDYRPD 120

Query: 121 ILHQALLAIFDSRIAKAGRLKVVYVKTEKGLLIEIKPYVRLPRTQKRFYGVMLQLLQKLS 180
           ILHQALLAIFDSRIAKAGRLKVVYVKTEKGLLIEIKPYVRLPRTQKRFYGVMLQLLQKLS
Sbjct: 121 ILHQALLAIFDSRIAKAGRLKVVYVKTEKGLLIEIKPYVRLPRTQKRFYGVMLQLLQKLS 180

Query: 181 ITAAGKREKLFRVIKNPVTQYLPANSRKMGFSHSSDKLVKMRNYLDAVKDDVDLVFVVGA 240
           ITAAGKREKLFRVIKNPVTQYLPAN RKMGFSHSSDKLVKMRNYLDAVKDDVDLVFVVGA
Sbjct: 181 ITAAGKREKLFRVIKNPVTQYLPANCRKMGFSHSSDKLVKMRNYLDAVKDDVDLVFVVGA 240

Query: 241 MAHGKIETGYTDDLLAISEYPLSASCCIADICKDLAEKWNVG 283
           MAHGKIET YTDDLLAISEYPLSASCCIADICKDLAEKWNVG
Sbjct: 241 MAHGKIETDYTDDLLAISEYPLSASCCIADICKDLAEKWNVG 275

[Close]

BLAST of Tan0016100.1 vs. NCBI nr
Match: KAG7017643.1 (Ribosomal RNA small subunit methyltransferase NEP1, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 495.7 bits (1275), Expect = 2.6e-136
Identity = 252/282 (89.36%), Postives = 265/282 (93.97%), Query Frame = 0


Query: 1   MVRPFAVKGKKRKKTEKYDRDNGDGESTTPTKKPMVEKEPEPDEEELVNEAAKQDFHELE 60
           MVRPFA KGKKRKKTE+YDRD+   EST   KK MVE EP+   E   NEAA+++FHELE
Sbjct: 1   MVRPFAAKGKKRKKTERYDRDDDGEESTASAKKAMVENEPDEQPE---NEAAEENFHELE 60

Query: 61  GIPIIPRDPKSDNNAGVIFVLERASLEVAKVGKNYQLLNSDDHSNFLRRNNRNPGDYRPD 120
           GIPI+P+DPKSD+ AGVIFVLERASLEVAKVGKNYQLLNSDDHSNFLRRNNRNPGDYRPD
Sbjct: 61  GIPIVPKDPKSDSKAGVIFVLERASLEVAKVGKNYQLLNSDDHSNFLRRNNRNPGDYRPD 120

Query: 121 ILHQALLAIFDSRIAKAGRLKVVYVKTEKGLLIEIKPYVRLPRTQKRFYGVMLQLLQKLS 180
           ILHQALLAIFDSRIAKAGRLKVVYVKTEKGLLIEIKPYVRLPRTQKRFYGVMLQLLQKLS
Sbjct: 121 ILHQALLAIFDSRIAKAGRLKVVYVKTEKGLLIEIKPYVRLPRTQKRFYGVMLQLLQKLS 180

Query: 181 ITAAGKREKLFRVIKNPVTQYLPANSRKMGFSHSSDKLVKMRNYLDAVKDDVDLVFVVGA 240
           ITAAGKREKLFRVIKNPVTQYLP+NSRKMGFSHSSDKLVK+R YLDAV+DDVDLVFVVGA
Sbjct: 181 ITAAGKREKLFRVIKNPVTQYLPSNSRKMGFSHSSDKLVKVRTYLDAVEDDVDLVFVVGA 240

Query: 241 MAHGKIETGYTDDLLAISEYPLSASCCIADICKDLAEKWNVG 283
           MAHGKIETGYTDDLLAISEYPLSASCCIADICKDLA+KWNVG
Sbjct: 241 MAHGKIETGYTDDLLAISEYPLSASCCIADICKDLADKWNVG 279

[Close]

BLAST of Tan0016100.1 vs. NCBI nr
Match: XP_023527836.1 (ribosomal RNA small subunit methyltransferase nep-1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 495.0 bits (1273), Expect = 4.4e-136
Identity = 252/282 (89.36%), Postives = 264/282 (93.62%), Query Frame = 0


Query: 1   MVRPFAVKGKKRKKTEKYDRDNGDGESTTPTKKPMVEKEPEPDEEELVNEAAKQDFHELE 60
           MVRPFA KGKKRKKTE+YDRD+   EST   KK MVE EP+   E   NEAA++ FHELE
Sbjct: 1   MVRPFAAKGKKRKKTERYDRDDDGEESTASAKKAMVENEPDEQPE---NEAAEETFHELE 60

Query: 61  GIPIIPRDPKSDNNAGVIFVLERASLEVAKVGKNYQLLNSDDHSNFLRRNNRNPGDYRPD 120
           GIPI+P+DPKSD+ AGVIFVLERASLEVAKVGKNYQLLNSDDHSNFLRRNNRNPGDYRPD
Sbjct: 61  GIPIVPKDPKSDSKAGVIFVLERASLEVAKVGKNYQLLNSDDHSNFLRRNNRNPGDYRPD 120

Query: 121 ILHQALLAIFDSRIAKAGRLKVVYVKTEKGLLIEIKPYVRLPRTQKRFYGVMLQLLQKLS 180
           ILHQALLAIFDSRIAKAGRLKVVYVKTEKGLLIEIKPYVRLPRTQKRFYGVMLQLLQKLS
Sbjct: 121 ILHQALLAIFDSRIAKAGRLKVVYVKTEKGLLIEIKPYVRLPRTQKRFYGVMLQLLQKLS 180

Query: 181 ITAAGKREKLFRVIKNPVTQYLPANSRKMGFSHSSDKLVKMRNYLDAVKDDVDLVFVVGA 240
           ITAAGKREKLFRVIKNPVTQYLP+NSRKMGFSHSSDKLVK+R YLDAV+DDVDLVFVVGA
Sbjct: 181 ITAAGKREKLFRVIKNPVTQYLPSNSRKMGFSHSSDKLVKVRTYLDAVEDDVDLVFVVGA 240

Query: 241 MAHGKIETGYTDDLLAISEYPLSASCCIADICKDLAEKWNVG 283
           MAHGKIETGYTDDLLAISEYPLSASCCIADICKDLA+KWNVG
Sbjct: 241 MAHGKIETGYTDDLLAISEYPLSASCCIADICKDLADKWNVG 279

[Close]

BLAST of Tan0016100.1 vs. NCBI nr
Match: XP_004136640.2 (ribosomal RNA small subunit methyltransferase nep-1 [Cucumis sativus] >KAE8651185.1 hypothetical protein Csa_001834 [Cucumis sativus])

HSP 1 Score: 494.2 bits (1271), Expect = 7.5e-136
Identity = 251/282 (89.01%), Postives = 263/282 (93.26%), Query Frame = 0


Query: 1   MVRPFAVKGKKRKKTEKYDRDNGDGESTTPTKKPMVEKEPEPDEEELVNEAAKQDFHELE 60
           MVRPFA KGKKRKK+EKYDRD    EST+P+KK M+E EP+        E AK+DFHELE
Sbjct: 1   MVRPFAAKGKKRKKSEKYDRDEDAEESTSPSKKVMLENEPD-------EEPAKEDFHELE 60

Query: 61  GIPIIPRDPKSDNNAGVIFVLERASLEVAKVGKNYQLLNSDDHSNFLRRNNRNPGDYRPD 120
           GIPI P+DPK+D+NAGVIF+LERASLEVAKVGKNYQLLNSDDHSN+LRRNNRNPGDYRPD
Sbjct: 61  GIPIAPKDPKNDSNAGVIFILERASLEVAKVGKNYQLLNSDDHSNYLRRNNRNPGDYRPD 120

Query: 121 ILHQALLAIFDSRIAKAGRLKVVYVKTEKGLLIEIKPYVRLPRTQKRFYGVMLQLLQKLS 180
           ILHQALLAIFDSRIAKAGRLKVVYVKTEKGLLIEIKPYVRLPRTQKRFYGVMLQLLQKLS
Sbjct: 121 ILHQALLAIFDSRIAKAGRLKVVYVKTEKGLLIEIKPYVRLPRTQKRFYGVMLQLLQKLS 180

Query: 181 ITAAGKREKLFRVIKNPVTQYLPANSRKMGFSHSSDKLVKMRNYLDAVKDDVDLVFVVGA 240
           ITAAGKREKLFRVIKNPVTQYLPAN RKMGFSHSSDKLVK+RNYLDAVKDDVDLVFVVGA
Sbjct: 181 ITAAGKREKLFRVIKNPVTQYLPANCRKMGFSHSSDKLVKVRNYLDAVKDDVDLVFVVGA 240

Query: 241 MAHGKIETGYTDDLLAISEYPLSASCCIADICKDLAEKWNVG 283
           MAHGKIET YTDDLLAISEYPLSASCCIADICKDLAEKWNVG
Sbjct: 241 MAHGKIETDYTDDLLAISEYPLSASCCIADICKDLAEKWNVG 275

[Close]

BLAST of Tan0016100.1 vs. ExPASy TrEMBL
Match: A0A5D3DPQ6 (Ribosomal RNA small subunit methyltransferase NEP1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G006800 PE=3 SV=1)

HSP 1 Score: 496.5 bits (1277), Expect = 7.3e-137
Identity = 252/282 (89.36%), Postives = 261/282 (92.55%), Query Frame = 0


Query: 1   MVRPFAVKGKKRKKTEKYDRDNGDGESTTPTKKPMVEKEPEPDEEELVNEAAKQDFHELE 60
           MVRPFA KGKKRKK EKYDRD    ES++P KK MVE EP+        E  K+DFHELE
Sbjct: 1   MVRPFAAKGKKRKKAEKYDRDEDGEESSSPAKKVMVENEPD-------EEPPKEDFHELE 60

Query: 61  GIPIIPRDPKSDNNAGVIFVLERASLEVAKVGKNYQLLNSDDHSNFLRRNNRNPGDYRPD 120
           GIPI+P+DPK+DNNAGVIF+LERASLEVAKVGKNYQLLNSDDHSN+LRRNNRNPGDYRPD
Sbjct: 61  GIPIVPKDPKTDNNAGVIFILERASLEVAKVGKNYQLLNSDDHSNYLRRNNRNPGDYRPD 120

Query: 121 ILHQALLAIFDSRIAKAGRLKVVYVKTEKGLLIEIKPYVRLPRTQKRFYGVMLQLLQKLS 180
           ILHQALLAIFDSRIAKAGRLKVVYVKTEKGLLIEIKPYVRLPRTQKRFYGVMLQLLQKLS
Sbjct: 121 ILHQALLAIFDSRIAKAGRLKVVYVKTEKGLLIEIKPYVRLPRTQKRFYGVMLQLLQKLS 180

Query: 181 ITAAGKREKLFRVIKNPVTQYLPANSRKMGFSHSSDKLVKMRNYLDAVKDDVDLVFVVGA 240
           ITAAGKREKLFRVIKNPVTQYLPAN RKMGFSHSSDKLVKMRNYLDAVKDDVDLVFVVGA
Sbjct: 181 ITAAGKREKLFRVIKNPVTQYLPANCRKMGFSHSSDKLVKMRNYLDAVKDDVDLVFVVGA 240

Query: 241 MAHGKIETGYTDDLLAISEYPLSASCCIADICKDLAEKWNVG 283
           MAHGKIET YTDDLLAISEYPLSASCCIADICKDLAEKWNVG
Sbjct: 241 MAHGKIETDYTDDLLAISEYPLSASCCIADICKDLAEKWNVG 275

[Close]

BLAST of Tan0016100.1 vs. ExPASy TrEMBL
Match: A0A1S3B7L0 (ribosomal RNA small subunit methyltransferase NEP1 OS=Cucumis melo OX=3656 GN=LOC103486891 PE=3 SV=1)

HSP 1 Score: 496.5 bits (1277), Expect = 7.3e-137
Identity = 252/282 (89.36%), Postives = 261/282 (92.55%), Query Frame = 0


Query: 1   MVRPFAVKGKKRKKTEKYDRDNGDGESTTPTKKPMVEKEPEPDEEELVNEAAKQDFHELE 60
           MVRPFA KGKKRKK EKYDRD    ES++P KK MVE EP+        E  K+DFHELE
Sbjct: 1   MVRPFAAKGKKRKKAEKYDRDEDGEESSSPAKKVMVENEPD-------EEPPKEDFHELE 60

Query: 61  GIPIIPRDPKSDNNAGVIFVLERASLEVAKVGKNYQLLNSDDHSNFLRRNNRNPGDYRPD 120
           GIPI+P+DPK+DNNAGVIF+LERASLEVAKVGKNYQLLNSDDHSN+LRRNNRNPGDYRPD
Sbjct: 61  GIPIVPKDPKTDNNAGVIFILERASLEVAKVGKNYQLLNSDDHSNYLRRNNRNPGDYRPD 120

Query: 121 ILHQALLAIFDSRIAKAGRLKVVYVKTEKGLLIEIKPYVRLPRTQKRFYGVMLQLLQKLS 180
           ILHQALLAIFDSRIAKAGRLKVVYVKTEKGLLIEIKPYVRLPRTQKRFYGVMLQLLQKLS
Sbjct: 121 ILHQALLAIFDSRIAKAGRLKVVYVKTEKGLLIEIKPYVRLPRTQKRFYGVMLQLLQKLS 180

Query: 181 ITAAGKREKLFRVIKNPVTQYLPANSRKMGFSHSSDKLVKMRNYLDAVKDDVDLVFVVGA 240
           ITAAGKREKLFRVIKNPVTQYLPAN RKMGFSHSSDKLVKMRNYLDAVKDDVDLVFVVGA
Sbjct: 181 ITAAGKREKLFRVIKNPVTQYLPANCRKMGFSHSSDKLVKMRNYLDAVKDDVDLVFVVGA 240

Query: 241 MAHGKIETGYTDDLLAISEYPLSASCCIADICKDLAEKWNVG 283
           MAHGKIET YTDDLLAISEYPLSASCCIADICKDLAEKWNVG
Sbjct: 241 MAHGKIETDYTDDLLAISEYPLSASCCIADICKDLAEKWNVG 275

[Close]

BLAST of Tan0016100.1 vs. ExPASy TrEMBL
Match: A0A0A0LFI3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G821550 PE=3 SV=1)

HSP 1 Score: 494.2 bits (1271), Expect = 3.6e-136
Identity = 251/282 (89.01%), Postives = 263/282 (93.26%), Query Frame = 0


Query: 1   MVRPFAVKGKKRKKTEKYDRDNGDGESTTPTKKPMVEKEPEPDEEELVNEAAKQDFHELE 60
           MVRPFA KGKKRKK+EKYDRD    EST+P+KK M+E EP+        E AK+DFHELE
Sbjct: 33  MVRPFAAKGKKRKKSEKYDRDEDAEESTSPSKKVMLENEPD-------EEPAKEDFHELE 92

Query: 61  GIPIIPRDPKSDNNAGVIFVLERASLEVAKVGKNYQLLNSDDHSNFLRRNNRNPGDYRPD 120
           GIPI P+DPK+D+NAGVIF+LERASLEVAKVGKNYQLLNSDDHSN+LRRNNRNPGDYRPD
Sbjct: 93  GIPIAPKDPKNDSNAGVIFILERASLEVAKVGKNYQLLNSDDHSNYLRRNNRNPGDYRPD 152

Query: 121 ILHQALLAIFDSRIAKAGRLKVVYVKTEKGLLIEIKPYVRLPRTQKRFYGVMLQLLQKLS 180
           ILHQALLAIFDSRIAKAGRLKVVYVKTEKGLLIEIKPYVRLPRTQKRFYGVMLQLLQKLS
Sbjct: 153 ILHQALLAIFDSRIAKAGRLKVVYVKTEKGLLIEIKPYVRLPRTQKRFYGVMLQLLQKLS 212

Query: 181 ITAAGKREKLFRVIKNPVTQYLPANSRKMGFSHSSDKLVKMRNYLDAVKDDVDLVFVVGA 240
           ITAAGKREKLFRVIKNPVTQYLPAN RKMGFSHSSDKLVK+RNYLDAVKDDVDLVFVVGA
Sbjct: 213 ITAAGKREKLFRVIKNPVTQYLPANCRKMGFSHSSDKLVKVRNYLDAVKDDVDLVFVVGA 272

Query: 241 MAHGKIETGYTDDLLAISEYPLSASCCIADICKDLAEKWNVG 283
           MAHGKIET YTDDLLAISEYPLSASCCIADICKDLAEKWNVG
Sbjct: 273 MAHGKIETDYTDDLLAISEYPLSASCCIADICKDLAEKWNVG 307

[Close]

BLAST of Tan0016100.1 vs. ExPASy TrEMBL
Match: A0A6J1F634 (ribosomal RNA small subunit methyltransferase nep-1 OS=Cucurbita moschata OX=3662 GN=LOC111442430 PE=3 SV=1)

HSP 1 Score: 493.8 bits (1270), Expect = 4.7e-136
Identity = 251/282 (89.01%), Postives = 264/282 (93.62%), Query Frame = 0


Query: 1   MVRPFAVKGKKRKKTEKYDRDNGDGESTTPTKKPMVEKEPEPDEEELVNEAAKQDFHELE 60
           MVRPFA KGKKRKK E+YDRD+   EST   KK MVE EP+   E   NEAA+++FHELE
Sbjct: 1   MVRPFAAKGKKRKKAERYDRDDDGEESTASAKKAMVENEPDEQPE---NEAAEENFHELE 60

Query: 61  GIPIIPRDPKSDNNAGVIFVLERASLEVAKVGKNYQLLNSDDHSNFLRRNNRNPGDYRPD 120
           GIPI+P+DPKSD+ AGVIFVLERASLEVAKVGKNYQLLNSDDHSNFLRRNNRNPGDYRPD
Sbjct: 61  GIPIVPKDPKSDSKAGVIFVLERASLEVAKVGKNYQLLNSDDHSNFLRRNNRNPGDYRPD 120

Query: 121 ILHQALLAIFDSRIAKAGRLKVVYVKTEKGLLIEIKPYVRLPRTQKRFYGVMLQLLQKLS 180
           ILHQALLAIFDSRIAKAGRLKVVYVKTEKGLLIEIKPYVRLPRTQKRFYGVMLQLLQKLS
Sbjct: 121 ILHQALLAIFDSRIAKAGRLKVVYVKTEKGLLIEIKPYVRLPRTQKRFYGVMLQLLQKLS 180

Query: 181 ITAAGKREKLFRVIKNPVTQYLPANSRKMGFSHSSDKLVKMRNYLDAVKDDVDLVFVVGA 240
           ITAAGKREKLFRVIKNPVTQYLP+NSRKMGFSHSSDKLVK+R YLDAV+DDVDLVFVVGA
Sbjct: 181 ITAAGKREKLFRVIKNPVTQYLPSNSRKMGFSHSSDKLVKVRTYLDAVEDDVDLVFVVGA 240

Query: 241 MAHGKIETGYTDDLLAISEYPLSASCCIADICKDLAEKWNVG 283
           MAHGKIETGYTDDLLAISEYPLSASCCIADICKDLA+KWNVG
Sbjct: 241 MAHGKIETGYTDDLLAISEYPLSASCCIADICKDLADKWNVG 279

[Close]

BLAST of Tan0016100.1 vs. ExPASy TrEMBL
Match: A0A6J1J0G6 (ribosomal RNA small subunit methyltransferase nep-1 OS=Cucurbita maxima OX=3661 GN=LOC111482341 PE=3 SV=1)

HSP 1 Score: 493.4 bits (1269), Expect = 6.2e-136
Identity = 251/282 (89.01%), Postives = 264/282 (93.62%), Query Frame = 0


Query: 1   MVRPFAVKGKKRKKTEKYDRDNGDGESTTPTKKPMVEKEPEPDEEELVNEAAKQDFHELE 60
           MVRPFA KGKKRKKTE+YDRD+   ES    KK MVE EP+   E   NEAA+++FHELE
Sbjct: 1   MVRPFAAKGKKRKKTERYDRDDDGEESIASAKKAMVENEPDEQPE---NEAAEENFHELE 60

Query: 61  GIPIIPRDPKSDNNAGVIFVLERASLEVAKVGKNYQLLNSDDHSNFLRRNNRNPGDYRPD 120
           GIPI+P+DPKSD+ AGVIFVLERASLEVAKVGKNYQLLNSDDHSNFLRRNNRNPGDYRPD
Sbjct: 61  GIPIVPKDPKSDSKAGVIFVLERASLEVAKVGKNYQLLNSDDHSNFLRRNNRNPGDYRPD 120

Query: 121 ILHQALLAIFDSRIAKAGRLKVVYVKTEKGLLIEIKPYVRLPRTQKRFYGVMLQLLQKLS 180
           ILHQALLAIFDSRIAKAGRLKVVYVKTEKGLLIEIKPYVRLPRTQKRFYGVMLQLLQKLS
Sbjct: 121 ILHQALLAIFDSRIAKAGRLKVVYVKTEKGLLIEIKPYVRLPRTQKRFYGVMLQLLQKLS 180

Query: 181 ITAAGKREKLFRVIKNPVTQYLPANSRKMGFSHSSDKLVKMRNYLDAVKDDVDLVFVVGA 240
           ITAAGKREKLFRVIKNPVTQYLP+NSRKMGFSHSSDKLVK+R YLDAV+DDVDLVFVVGA
Sbjct: 181 ITAAGKREKLFRVIKNPVTQYLPSNSRKMGFSHSSDKLVKVRTYLDAVEDDVDLVFVVGA 240

Query: 241 MAHGKIETGYTDDLLAISEYPLSASCCIADICKDLAEKWNVG 283
           MAHGKIETGYTDDLLAISEYPLSASCCIADICKDLA+KWNVG
Sbjct: 241 MAHGKIETGYTDDLLAISEYPLSASCCIADICKDLADKWNVG 279

[Close]

BLAST of Tan0016100.1 vs. TAIR 10
Match: AT3G57000.1 (nucleolar essential protein-related )

HSP 1 Score: 308.9 bits (790), Expect = 4.2e-84
Identity = 167/298 (56.04%), Postives = 213/298 (71.48%), Query Frame = 0


Query: 1   MVRPFAVKGKKRK-KTEKYDRDNGD-------------GESTTPTKKPMVEK-EPEPDEE 60
           MVRP+ +K  KRK + E+YD++  +              ES+   KK    + E + DEE
Sbjct: 1   MVRPYGIKVNKRKEREERYDKEEDEVEEQPKFEQKQKARESSKKAKKESTSRAEEDNDEE 60

Query: 61  ELVNEAAKQDFHELEGIPIIPRDPKSDNNAGVIFVLERASLEVAKVGKNYQLLNSDDHSN 120
           E+  EA       + GIPI+   P  +  +G++FVLE+ASLEVAKVGK YQLLNSDDH+N
Sbjct: 61  EVTVEATAAAEDIVGGIPIVLNAPNKE-KSGIVFVLEKASLEVAKVGKTYQLLNSDDHAN 120

Query: 121 FLRRNNRNPGDYRPDILHQALLAIFDSRIAKAGRLKVVYVKTEKGLLIEIKPYVRLPRTQ 180
           FL++NNRNP DYRPDI HQALL I DS + KAGRLK VYV+TEKG+L E+KP+VR+PRT 
Sbjct: 121 FLKKNNRNPADYRPDITHQALLMILDSPVNKAGRLKAVYVRTEKGVLFEVKPHVRIPRTF 180

Query: 181 KRFYGVMLQLLQKLSITAAGKREKLFRVIKNPVTQ-YLPANSRKMGFSHSSDKLVKMRNY 240
           KRF G+MLQLLQKLSITA   REKL R +KNP+ + +LP NS ++GFSHSS+KLV M+ +
Sbjct: 181 KRFAGIMLQLLQKLSITAVNSREKLLRCVKNPIEEHHLPVNSHRIGFSHSSEKLVNMQKH 240

Query: 241 LDAV-KDDVDLVFVVGAMAHGKIETGYTDDLLAISEYPLSASCCIADICKDLAEKWNV 282
           L  V  DD D VFVVGAMAHGKI+  Y D+ +++SEYPLSA+ CI+ IC+ LA  WN+
Sbjct: 241 LATVCDDDRDTVFVVGAMAHGKIDCNYIDEFVSVSEYPLSAAYCISRICEALATNWNI 297

The following BLAST results are available for this feature:

BLAST of Tan0016100.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O35130	4.4e-46	47.80	Ribosomal RNA small subunit methyltransferase NEP1 OS=Mus musculus OX=10090 GN=E...	[more]
Q9XX15	1.3e-45	48.51	Ribosomal RNA small subunit methyltransferase nep-1 OS=Caenorhabditis elegans OX...	[more]
Q92979	1.7e-45	47.80	Ribosomal RNA small subunit methyltransferase NEP1 OS=Homo sapiens OX=9606 GN=EM...	[more]
Q9W4J5	1.8e-44	45.24	Ribosomal RNA small subunit methyltransferase NEP1 OS=Drosophila melanogaster OX...	[more]
Q06287	1.2e-43	40.24	Ribosomal RNA small subunit methyltransferase NEP1 OS=Saccharomyces cerevisiae (...	[more]

BLAST of Tan0016100.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038905075.1	8.8e-137	88.65	ribosomal RNA small subunit methyltransferase nep-1 [Benincasa hispida]	[more]
XP_008443268.1	1.5e-136	89.36	PREDICTED: ribosomal RNA small subunit methyltransferase NEP1 [Cucumis melo] >KA...	[more]
KAG7017643.1	2.6e-136	89.36	Ribosomal RNA small subunit methyltransferase NEP1, partial [Cucurbita argyrospe...	[more]
XP_023527836.1	4.4e-136	89.36	ribosomal RNA small subunit methyltransferase nep-1 [Cucurbita pepo subsp. pepo]	[more]
XP_004136640.2	7.5e-136	89.01	ribosomal RNA small subunit methyltransferase nep-1 [Cucumis sativus] >KAE865118...	[more]

BLAST of Tan0016100.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3DPQ6	7.3e-137	89.36	Ribosomal RNA small subunit methyltransferase NEP1 OS=Cucumis melo var. makuwa O...	[more]
A0A1S3B7L0	7.3e-137	89.36	ribosomal RNA small subunit methyltransferase NEP1 OS=Cucumis melo OX=3656 GN=LO...	[more]
A0A0A0LFI3	3.6e-136	89.01	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G821550 PE=3 SV=1	[more]
A0A6J1F634	4.7e-136	89.01	ribosomal RNA small subunit methyltransferase nep-1 OS=Cucurbita moschata OX=366...	[more]
A0A6J1J0G6	6.2e-136	89.01	ribosomal RNA small subunit methyltransferase nep-1 OS=Cucurbita maxima OX=3661 ...	[more]

BLAST of Tan0016100.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G57000.1	4.2e-84	56.04	nucleolar essential protein-related	[more]

InterPro

Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR029026	tRNA (guanine-N1-)-methyltransferase, N-terminal	GENE3D	3.40.1280.10		coord: 77..281 e-value: 2.4E-81 score: 274.0
IPR005304	Ribosomal biogenesis, methyltransferase, EMG1/NEP1	PFAM	PF03587	EMG1	coord: 79..274 e-value: 2.2E-65 score: 220.1
IPR005304	Ribosomal biogenesis, methyltransferase, EMG1/NEP1	PANTHER	PTHR12636	NEP1/MRA1	coord: 9..281
IPR005304	Ribosomal biogenesis, methyltransferase, EMG1/NEP1	CDD	cd18088	Nep1-like	coord: 77..272 e-value: 1.47843E-95 score: 278.259
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..48
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 12..40
IPR029028	Alpha/beta knot methyltransferases	SUPERFAMILY	75217	alpha/beta knot	coord: 69..281

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Tan0016100	Tan0016100	gene

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Tan0016100.1-three_prime_utr	Tan0016100.1-three_prime_utr-LG03:788737..789125	three_prime_UTR

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Tan0016100.1-exon	Tan0016100.1-exon-LG03:788737..789205	exon
Tan0016100.1-exon	Tan0016100.1-exon-LG03:789669..789726	exon
Tan0016100.1-exon	Tan0016100.1-exon-LG03:789818..789900	exon
Tan0016100.1-exon	Tan0016100.1-exon-LG03:789982..790092	exon
Tan0016100.1-exon	Tan0016100.1-exon-LG03:790189..790333	exon
Tan0016100.1-exon	Tan0016100.1-exon-LG03:790447..790539	exon
Tan0016100.1-exon	Tan0016100.1-exon-LG03:790715..791053	exon
Tan0016100.1-exon	Tan0016100.1-exon-LG03:796500..796670	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Tan0016100.1-cds	Tan0016100.1-cds-LG03:789126..789205	CDS
Tan0016100.1-cds	Tan0016100.1-cds-LG03:789669..789726	CDS
Tan0016100.1-cds	Tan0016100.1-cds-LG03:789818..789900	CDS
Tan0016100.1-cds	Tan0016100.1-cds-LG03:789982..790092	CDS
Tan0016100.1-cds	Tan0016100.1-cds-LG03:790189..790333	CDS
Tan0016100.1-cds	Tan0016100.1-cds-LG03:790447..790539	CDS
Tan0016100.1-cds	Tan0016100.1-cds-LG03:790715..790993	CDS

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Tan0016100.1-five_prime_utr	Tan0016100.1-five_prime_utr-LG03:790994..791053	five_prime_UTR
Tan0016100.1-five_prime_utr	Tan0016100.1-five_prime_utr-LG03:796500..796670	five_prime_UTR

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Tan0016100.1	Tan0016100.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0070475	rRNA base methylation
cellular_component	GO:0005730	nucleolus
cellular_component	GO:0032040	small-subunit processome
molecular_function	GO:0070037	rRNA (pseudouridine) methyltransferase activity
molecular_function	GO:0019843	rRNA binding