Tan0012242.3 (mRNA) Snake gourd v1

Overview


Name	Tan0012242.3
Type	mRNA
Organism	Trichosanthes anguina (Snake gourd v1)
Description	RAC-like GTP binding protein 5
Location	LG05: 10171347 .. 10174878 (-)
Sequence length	1772
RNA-Seq Expression	Tan0012242.3
Synteny	Tan0012242.3

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CGGTAAACCAAATCAAATGTAAAATACCCCTTTTTTTTGTTTCAATTCTAGAATAATTTCATAAATTGAAATCAAAATCTCCACATTTTCATACTCAAACAAAATCTTTGGTTGCGACCCGTGTCTTCCTTCAAAAAGAAGAAAATAACAACCAAAGAGAATACCTTTCTTTCTTTAAAGAGGAGATTGAGAAAGAAAATTAGTCGAAGTGAAAGAAAAAAAAAAGTTACCCAAAGGTGAAGAGCGAGCTAAAGAAGAGAGAGGACCGAGAGCGACAAGTTTGACTTCAACATCTATTGATTGGTAAAAAAATTTCCAATTTCCTTCCAACCCAGAACGGTAGAATTGAAAGAGTGCTTTCAATTTCAATTTTCAGATCGTGATTTTTACTCTGCCATAGCTGGCCAAGAGCTGGCCTCCCCTCTTTATAGACCCAGTTGCCTTGTCTTTGTGACTTTCCCTCTCTCTCCCACGGGTACATACAATTTCCTTTGTGACCCCTTTGTAAATGTGCCTGGATTTGTGGGTTAACTCCACTTTTATCTCTTTTCCCCTGTGTGTTACTGATTCTGCATTGGTAGACTTTCGAACGGAGCTCTGAAGGAGGAAATGAGTGTTTCAAGGTTCATAAAGTGTGTTACGGTTGGTGATGGTGCTGTTGGGAAAACTTGTATGCTTATCTCCTACACCAGCAATACTTTCCCCACGGTGAGCTACTTTAGCTTTAATTTTTCCTTTTTTTTTCTTGTTCTTGTTTGGTTTCTGGGAAAATTTGGGTTATTGAGTTAGTTCTGAGAGGGTTTTGTTGTTGACTAATGGACTTCAGTTTCTGCACTTTTTGAGCTAAGAATGCTTCTTTCTTTTCTGGGGTTTTGCGCATTTTGCCTTTTGTTTCAGTGAACCCTTTTTTAAGCTCCTTGTGTTTGGGTTCTTGGTTTCTGAAGAACAAATCTGTTGTATTTTTGTTGTCGTTTTTTCGTGTCTTTGTTTGCTTTCTTGCCCATGGAAGCAAAGAAAATTTCATCCACATGTTTGGTGGAACACGAATCTTTTGGAGTTGCAGGTCCCCTCGAGCAATTTCAGCCTCTTTTCAGTCTACTAGTTGTTGCAGGAAGATTCTCACATGAGGAGATTTCTAAATTCTGGCCTTTTGAGTCTTTGACCATGTCTTCCCTTCCAAACAAATGGGAGTGAATTATGGTTTCATTTTCGTTTGTGTAGCAATTTCTTGCTCTTTATGACTAATTGTTTGCTGTTTTCAGTACACTTTTGTTTGTGCATTCATGTGCCTCTCTTTGTTTTACTGGTAGAGAGGCCATCCAAACATTTTGGTGTTCTTAGTGTAAATACAGAATCTGCATTTTTAGCTGTAAGCATATCCTCCATGAAACTGTACTTTTGCCTGGTATCAGATCTCCATCCGTCTGTGTGTGTGATTTGGGGAAAACTTTTGCAATGTCGAAATCTTGATGATTTATCTGTCTTCCATTTTTAAATTTGTTCAATAAGGTGTCTTGATTTGCAGATTGTAGCTAAGATGCATAAGGTTTTGCATGTTTTAGATTCTTAAGTTCTGTGAAATTGTTATCCATCTATAATGACTGGGGAATACTCTGAAACAGGATTACGTGCCAACTGTTTTCGATAATTTTAGTGCAAATGTGGTTGTGGATGGCAGCACGGTCAACCTAGGCTTGTGGGATACTGCCGGTATGTTAAAAACGAGTTCTTACATAACTTTCTTTCTTGCTGAGTATCTGATGTATGAATCATGAACCAGGCCAGGAAGATTACAATAGATTGAGGCCTTTGAGCTACCGTGGAGCAGATGTATTTCTGCTAGCATTCTCTCTCATAAGCAAGGCTAGCTACGAAAATGTCGCCAAAAAAGTAAGCCTCTGCTTTATCTTCGTCAGTTGAACTTATCTTTCATTCCGTTTGTTTCAATGTTTCTGGTTCCAATTTTAGCTAATATACTTCTTTCCCATGACAGTGGATTCCTGAACTAAGGCATTATGCTCCTGGTGTACCAGTTATTCTCGTCGGGACTAAGCTCGGTTATATTCTTCACTACCTTTCTAGTTTTCTCCTTTTAAGTGTTGCATTTGAAAAAACGTTCTTGTTCCATTTGTTTGCTGATGATTGTTTCTAAGTACAAGGTGTTATAATTCTGTGTTACACAAGGAACATACCCTGATGAACTACATGAAACAACATTACTGTTAATAAGATCTGGCGTCAGTTGATACAGTTTCTTTTACCTAAGGAACGGAATAGGTTACTTGCTATGCAACGAAAATGTGGTTATTACTCTGCATTTGGCTTATTAAGTATCATAGTTGACTAGCTTGTACCATTAAAGACCCTGGAAGAAGTCAGTTGAATAACCCAAGCACCATCTTTAACTCTCTTGGAACAGTAGTGTTTTTGATAAATATCGTATTCTTGTGCGCACTCGATGTGGGATTATTGATAATCATGAGTATCAACTTGCTTCATGTAGATCTTCGAGAAGATAAACAATACCTCATTGAACACCCAGGGGTTGTGCCCATTACCAACGCCCAGGTATCCTGCAATGTAACCCTGTATTTACGAGTTCCATATTACAATATTAGTCCTGTGTCATAGTTTTGTTCGTCTTTTACAGTCCGGTTTAGTTATCTCCTTCTCATCTCTCCCTTATTTTAAGATTTCAACTTTTCTTGTAGGGGGAGGAACTGAGGAAACTTATCGGTGCCCCAGTTTACATTGAATGCAGTTCGAAAACACAGCAAGTATGAAGAATCCACTCCTTCTCTCTCTACTCTCTCCGATCTCTCGCTCCTTAACAAATTCTTTCATTATTGATCCGAATGCAGAATGTGAAAGCAGTTTTCGACGCAGCAATCAAAGTGGTTCTCCAGCCTCCAAAGCGGAAGAAGCGAAAGAAGAGAAAGGCACAGAAGGCGTGTTCTATATTATGATGCAAAGTCAGTTGTATCACAACCGGTTAGAATTCGAAGACATATTAGTAAGCTACTCATCATTTAGCTCCTAACTATCACTATATGAGTTCTATTTTCACATTGTCCTTAACGCAACCCTGCAATCGAGCAGCAAATCTCATCCTCTGTGCTTGCCTTCTCTCTGGGTTGTGCTATGATTTGTAAAAAGTGTTTTAAATTCATCTGTCTAATATGCATGATGATAGTATATGTTCGAGTTTAGATATCTTCCATGTAACTGATCTCGAGTTAGTAACGATTAAGCTCTGTATGTCGTCCTGCATCAATATATTGTAATGTTCTTGGATGCTTTTCATCTATCAGTTGGTTAGAATCATCTTTCCAGAAAGTTGGGTGACTGTGGAACAAAGCTTTCCATTGATTGACATTTAGAAGCCTTTATTTTGGTTTAACAGTCTCTGGATCTGGAGTAATGTTTGACTGGAACAATATGTAGGCTTGTACTATGAACTGATTTTCTACCATTAGTTTGTATGTAATATTGAGACTTCATATTTGTATGATATTATCAGATTTGGACTTAA

mRNA sequence

CGGTAAACCAAATCAAATGTAAAATACCCCTTTTTTTTGTTTCAATTCTAGAATAATTTCATAAATTGAAATCAAAATCTCCACATTTTCATACTCAAACAAAATCTTTGGTTGCGACCCGTGTCTTCCTTCAAAAAGAAGAAAATAACAACCAAAGAGAATACCTTTCTTTCTTTAAAGAGGAGATTGAGAAAGAAAATTAGTCGAAGTGAAAGAAAAAAAAAAGTTACCCAAAGGTGAAGAGCGAGCTAAAGAAGAGAGAGGACCGAGAGCGACAAGTTTGACTTCAACATCTATTGATTGGTAAAAAAATTTCCAATTTCCTTCCAACCCAGAACGGTAGAATTGAAAGAGTGCTTTCAATTTCAATTTTCAGATCGTGATTTTTACTCTGCCATAGCTGGCCAAGAGCTGGCCTCCCCTCTTTATAGACCCAGTTGCCTTGTCTTTGTGACTTTCCCTCTCTCTCCCACGGGTACATACAATTTCCTTTGTGACCCCTTTGTAAATGTGCCTGGATTTGTGGGTTAACTCCACTTTTATCTCTTTTCCCCTGTGTGTTACTGATTCTGCATTGGTAGACTTTCGAACGGAGCTCTGAAGGAGGAAATGAGTGTTTCAAGGTTCATAAAGTGTGTTACGGTTGGTGATGGTGCTGTTGGGAAAACTTGTATGCTTATCTCCTACACCAGCAATACTTTCCCCACGGATTACGTGCCAACTGTTTTCGATAATTTTAGTGCAAATGTGGTTGTGGATGGCAGCACGGTCAACCTAGGCTTGTGGGATACTGCCGGCCAGGAAGATTACAATAGATTGAGGCCTTTGAGCTACCGTGGAGCAGATGTATTTCTGCTAGCATTCTCTCTCATAAGCAAGGCTAGCTACGAAAATGTCGCCAAAAAATGGATTCCTGAACTAAGGCATTATGCTCCTGGTGTACCAGTTATTCTCGTCGGGACTAAGCTCGATCTTCGAGAAGATAAACAATACCTCATTGAACACCCAGGGGTTGTGCCCATTACCAACGCCCAGGGGGAGGAACTGAGGAAACTTATCGGTGCCCCAGTTTACATTGAATGCAGTTCGAAAACACAGCAAAATGTGAAAGCAGTTTTCGACGCAGCAATCAAAGTGGTTCTCCAGCCTCCAAAGCGGAAGAAGCGAAAGAAGAGAAAGGCACAGAAGGCGTGTTCTATATTATGATGCAAAGTCAGTTGTATCACAACCGGTTAGAATTCGAAGACATATTAGTAAGCTACTCATCATTTAGCTCCTAACTATCACTATATGAGTTCTATTTTCACATTGTCCTTAACGCAACCCTGCAATCGAGCAGCAAATCTCATCCTCTGTGCTTGCCTTCTCTCTGGGTTGTGCTATGATTTGTAAAAAGTGTTTTAAATTCATCTGTCTAATATGCATGATGATAGTATATGTTCGAGTTTAGATATCTTCCATGTAACTGATCTCGAGTTAGTAACGATTAAGCTCTGTATGTCGTCCTGCATCAATATATTGTAATGTTCTTGGATGCTTTTCATCTATCAGTTGGTTAGAATCATCTTTCCAGAAAGTTGGGTGACTGTGGAACAAAGCTTTCCATTGATTGACATTTAGAAGCCTTTATTTTGGTTTAACAGTCTCTGGATCTGGAGTAATGTTTGACTGGAACAATATGTAGGCTTGTACTATGAACTGATTTTCTACCATTAGTTTGTATGTAATATTGAGACTTCATATTTGTATGATATTATCAGATTTGGACTTAA

Coding sequence (CDS)

ATGAGTGTTTCAAGGTTCATAAAGTGTGTTACGGTTGGTGATGGTGCTGTTGGGAAAACTTGTATGCTTATCTCCTACACCAGCAATACTTTCCCCACGGATTACGTGCCAACTGTTTTCGATAATTTTAGTGCAAATGTGGTTGTGGATGGCAGCACGGTCAACCTAGGCTTGTGGGATACTGCCGGCCAGGAAGATTACAATAGATTGAGGCCTTTGAGCTACCGTGGAGCAGATGTATTTCTGCTAGCATTCTCTCTCATAAGCAAGGCTAGCTACGAAAATGTCGCCAAAAAATGGATTCCTGAACTAAGGCATTATGCTCCTGGTGTACCAGTTATTCTCGTCGGGACTAAGCTCGATCTTCGAGAAGATAAACAATACCTCATTGAACACCCAGGGGTTGTGCCCATTACCAACGCCCAGGGGGAGGAACTGAGGAAACTTATCGGTGCCCCAGTTTACATTGAATGCAGTTCGAAAACACAGCAAAATGTGAAAGCAGTTTTCGACGCAGCAATCAAAGTGGTTCTCCAGCCTCCAAAGCGGAAGAAGCGAAAGAAGAGAAAGGCACAGAAGGCGTGTTCTATATTATGA

Protein sequence

MSVSRFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFLLAFSLISKASYENVAKKWIPELRHYAPGVPVILVGTKLDLREDKQYLIEHPGVVPITNAQGEELRKLIGAPVYIECSSKTQQNVKAVFDAAIKVVLQPPKRKKRKKRKAQKACSIL

Homology

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BLAST of Tan0012242.3 vs. ExPASy Swiss-Prot
Match: O04369 (Rac-like GTP-binding protein RAC1 OS=Lotus japonicus OX=34305 GN=RAC1 PE=2 SV=1)

HSP 1 Score: 369.8 bits (948), Expect = 2.0e-101
Identity = 181/198 (91.41%), Postives = 191/198 (96.46%), Query Frame = 0


Query: 1   MSVSRFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWD 60
           MS SRFIKCVTVGDGAVGKTC+LISYTSNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWD
Sbjct: 1   MSASRFIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWD 60

Query: 61  TAGQEDYNRLRPLSYRGADVFLLAFSLISKASYENVAKKWIPELRHYAPGVPVILVGTKL 120
           TAGQEDYNRLRPLSYRGADVF+LAFSLISKASYEN+AKKWIPELRHYAPGVP+ILVGTKL
Sbjct: 61  TAGQEDYNRLRPLSYRGADVFILAFSLISKASYENIAKKWIPELRHYAPGVPIILVGTKL 120

Query: 121 DLREDKQYLIEHPGVVPITNAQGEELRKLIGAPVYIECSSKTQQNVKAVFDAAIKVVLQP 180
           DLR+DK +L +HPG VPIT AQGEELRKLIGAP YIECSSKTQQNVKAVFDAAIKVVLQP
Sbjct: 121 DLRDDKHFLADHPGAVPITTAQGEELRKLIGAPAYIECSSKTQQNVKAVFDAAIKVVLQP 180

Query: 181 PKRKKRKKRKAQKACSIL 199
           PK+KK KKR+AQK+CSIL
Sbjct: 181 PKQKK-KKREAQKSCSIL 197

[Close]

BLAST of Tan0012242.3 vs. ExPASy Swiss-Prot
Match: Q38912 (Rac-like GTP-binding protein ARAC3 OS=Arabidopsis thaliana OX=3702 GN=ARAC3 PE=1 SV=1)

HSP 1 Score: 369.8 bits (948), Expect = 2.0e-101
Identity = 175/198 (88.38%), Postives = 190/198 (95.96%), Query Frame = 0


Query: 1   MSVSRFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWD 60
           MS SRFIKCVTVGDGAVGKTC+LISYTSNTFPTDYVPTVFDNFSANV+VDG+T+NLGLWD
Sbjct: 1   MSASRFIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVIVDGNTINLGLWD 60

Query: 61  TAGQEDYNRLRPLSYRGADVFLLAFSLISKASYENVAKKWIPELRHYAPGVPVILVGTKL 120
           TAGQEDYNRLRPLSYRGADVFLLAFSL+SKASYENV+KKW+PELRHYAPGVP+ILVGTKL
Sbjct: 61  TAGQEDYNRLRPLSYRGADVFLLAFSLVSKASYENVSKKWVPELRHYAPGVPIILVGTKL 120

Query: 121 DLREDKQYLIEHPGVVPITNAQGEELRKLIGAPVYIECSSKTQQNVKAVFDAAIKVVLQP 180
           DLR+DKQ+  EHPG VPI+ AQGEEL+KLIGAP YIECS+KTQQNVKAVFDAAIKVVLQP
Sbjct: 121 DLRDDKQFFAEHPGAVPISTAQGEELKKLIGAPAYIECSAKTQQNVKAVFDAAIKVVLQP 180

Query: 181 PKRKKRKKRKAQKACSIL 199
           PK KK+KKRK+QK CSIL
Sbjct: 181 PKNKKKKKRKSQKGCSIL 198

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BLAST of Tan0012242.3 vs. ExPASy Swiss-Prot
Match: Q6EP31 (Rac-like GTP-binding protein 5 OS=Oryza sativa subsp. japonica OX=39947 GN=RAC5 PE=2 SV=2)

HSP 1 Score: 366.7 bits (940), Expect = 1.7e-100
Identity = 179/198 (90.40%), Postives = 190/198 (95.96%), Query Frame = 0


Query: 1   MSVSRFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWD 60
           MS SRFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWD
Sbjct: 1   MSASRFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWD 60

Query: 61  TAGQEDYNRLRPLSYRGADVFLLAFSLISKASYENVAKKWIPELRHYAPGVPVILVGTKL 120
           TAGQEDYNRLRPLSYRGADVFLLAFSLISKASYENV+KKWIPELRHYAPGVP+ILVGTKL
Sbjct: 61  TAGQEDYNRLRPLSYRGADVFLLAFSLISKASYENVSKKWIPELRHYAPGVPIILVGTKL 120

Query: 121 DLREDKQYLIEHPGVVPITNAQGEELRKLIGAPVYIECSSKTQQNVKAVFDAAIKVVLQP 180
           DLR+DKQ+ ++HPG VPI+ AQGEELRKLIGA  YIECSSKTQQN+KAVFDAAIKVVLQP
Sbjct: 121 DLRDDKQFFVDHPGAVPISTAQGEELRKLIGAAAYIECSSKTQQNIKAVFDAAIKVVLQP 180

Query: 181 PKRKKRKKRKAQKACSIL 199
           PK+KK KK+KAQK C+IL
Sbjct: 181 PKQKK-KKKKAQKGCAIL 197

[Close]

BLAST of Tan0012242.3 vs. ExPASy Swiss-Prot
Match: Q39435 (Rac-like GTP-binding protein RHO1 OS=Beta vulgaris OX=161934 GN=RHO1 PE=2 SV=1)

HSP 1 Score: 366.3 bits (939), Expect = 2.2e-100
Identity = 179/198 (90.40%), Postives = 190/198 (95.96%), Query Frame = 0


Query: 1   MSVSRFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWD 60
           MS SRFIKCVTVGDGAVGKTC+LISYTSNTFPTDYVPTVFDNFSANVVV+G+TVNLGLWD
Sbjct: 1   MSASRFIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVNGATVNLGLWD 60

Query: 61  TAGQEDYNRLRPLSYRGADVFLLAFSLISKASYENVAKKWIPELRHYAPGVPVILVGTKL 120
           TAGQEDYNRLRPLSYRGADVF+LAFSLISKASYENV+KKWIPEL+HYAPGVP++LVGTKL
Sbjct: 61  TAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPGVPIVLVGTKL 120

Query: 121 DLREDKQYLIEHPGVVPITNAQGEELRKLIGAPVYIECSSKTQQNVKAVFDAAIKVVLQP 180
           DLR+DKQ+ I+HPG VPIT AQGEELRKLIGAP YIECSSKTQQNVKAVFDAAIKVVLQP
Sbjct: 121 DLRDDKQFFIDHPGAVPITTAQGEELRKLIGAPAYIECSSKTQQNVKAVFDAAIKVVLQP 180

Query: 181 PKRKKRKKRKAQKACSIL 199
           PK KK KK KAQKACSIL
Sbjct: 181 PKTKK-KKSKAQKACSIL 197

[Close]

BLAST of Tan0012242.3 vs. ExPASy Swiss-Prot
Match: P92978 (Rac-like GTP-binding protein ARAC11 OS=Arabidopsis thaliana OX=3702 GN=ARAC11 PE=1 SV=2)

HSP 1 Score: 363.2 bits (931), Expect = 1.8e-99
Identity = 176/198 (88.89%), Postives = 190/198 (95.96%), Query Frame = 0


Query: 1   MSVSRFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWD 60
           MS SRF+KCVTVGDGAVGKTC+LISYTSNTFPTDYVPTVFDNFSANVVV+GSTVNLGLWD
Sbjct: 1   MSASRFVKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVNGSTVNLGLWD 60

Query: 61  TAGQEDYNRLRPLSYRGADVFLLAFSLISKASYENVAKKWIPELRHYAPGVPVILVGTKL 120
           TAGQEDYNRLRPLSYRGADVF+LAFSLISKASYENV+KKWIPEL+HYAPGVP++LVGTKL
Sbjct: 61  TAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPGVPIVLVGTKL 120

Query: 121 DLREDKQYLIEHPGVVPITNAQGEELRKLIGAPVYIECSSKTQQNVKAVFDAAIKVVLQP 180
           DLR+DKQ+ I+HPG VPIT AQGEELRK IGAP YIECSSKTQ+NVKAVFDAAI+VVLQP
Sbjct: 121 DLRDDKQFFIDHPGAVPITTAQGEELRKQIGAPTYIECSSKTQENVKAVFDAAIRVVLQP 180

Query: 181 PKRKKRKKRKAQKACSIL 199
           PK+KK KK KAQKACSIL
Sbjct: 181 PKQKK-KKSKAQKACSIL 197

[Close]

BLAST of Tan0012242.3 vs. NCBI nr
Match: XP_022947397.1 (rac-like GTP-binding protein RAC1 [Cucurbita moschata] >XP_022971108.1 rac-like GTP-binding protein RAC1 [Cucurbita maxima] >XP_023533345.1 rac-like GTP-binding protein RAC1 [Cucurbita pepo subsp. pepo] >KAG6604937.1 Rac-like GTP-binding protein RAC1, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 393.3 bits (1009), Expect = 1.3e-105
Identity = 195/198 (98.48%), Postives = 197/198 (99.49%), Query Frame = 0


Query: 1   MSVSRFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWD 60
           MSVSRFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWD
Sbjct: 1   MSVSRFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWD 60

Query: 61  TAGQEDYNRLRPLSYRGADVFLLAFSLISKASYENVAKKWIPELRHYAPGVPVILVGTKL 120
           TAGQEDYNRLRPLSYRGADVFLLAFSLISKASYENVAKKWIPELRHYAPGVPVILVGTKL
Sbjct: 61  TAGQEDYNRLRPLSYRGADVFLLAFSLISKASYENVAKKWIPELRHYAPGVPVILVGTKL 120

Query: 121 DLREDKQYLIEHPGVVPITNAQGEELRKLIGAPVYIECSSKTQQNVKAVFDAAIKVVLQP 180
           DLREDKQYLIEHPGVVPIT +QGEELRKLIGAPVYIECSSKTQQNVKAVFDAAIKVVLQP
Sbjct: 121 DLREDKQYLIEHPGVVPITTSQGEELRKLIGAPVYIECSSKTQQNVKAVFDAAIKVVLQP 180

Query: 181 PKRKKRKKRKAQKACSIL 199
           PKRKKRKKRKAQK+CSIL
Sbjct: 181 PKRKKRKKRKAQKSCSIL 198

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BLAST of Tan0012242.3 vs. NCBI nr
Match: XP_004147042.1 (rac-like GTP-binding protein RAC1 [Cucumis sativus] >XP_008457691.1 PREDICTED: rac-like GTP-binding protein RAC1 [Cucumis melo] >XP_008457692.1 PREDICTED: rac-like GTP-binding protein RAC1 [Cucumis melo] >XP_011649289.1 rac-like GTP-binding protein RAC1 [Cucumis sativus] >KAA0045737.1 rac-like GTP-binding protein RAC1 [Cucumis melo var. makuwa] >KGN61933.1 hypothetical protein Csa_006714 [Cucumis sativus] >TYJ99544.1 rac-like GTP-binding protein RAC1 [Cucumis melo var. makuwa])

HSP 1 Score: 391.3 bits (1004), Expect = 4.8e-105
Identity = 194/198 (97.98%), Postives = 196/198 (98.99%), Query Frame = 0


Query: 1   MSVSRFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWD 60
           MSVSRFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWD
Sbjct: 1   MSVSRFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWD 60

Query: 61  TAGQEDYNRLRPLSYRGADVFLLAFSLISKASYENVAKKWIPELRHYAPGVPVILVGTKL 120
           TAGQEDYNRLRPLSYRGADVFLLAFSLIS+ASYENVAKKWIPELRHYAPGVPVILVGTKL
Sbjct: 61  TAGQEDYNRLRPLSYRGADVFLLAFSLISRASYENVAKKWIPELRHYAPGVPVILVGTKL 120

Query: 121 DLREDKQYLIEHPGVVPITNAQGEELRKLIGAPVYIECSSKTQQNVKAVFDAAIKVVLQP 180
           DLREDKQYL EHPG+VPIT AQGEELRKLIGAPVYIECSSKTQQNVKAVFDAAIKVVLQP
Sbjct: 121 DLREDKQYLNEHPGIVPITTAQGEELRKLIGAPVYIECSSKTQQNVKAVFDAAIKVVLQP 180

Query: 181 PKRKKRKKRKAQKACSIL 199
           PKRKKRKKRKAQKACSIL
Sbjct: 181 PKRKKRKKRKAQKACSIL 198

[Close]

BLAST of Tan0012242.3 vs. NCBI nr
Match: XP_038902146.1 (rac-like GTP-binding protein RAC1 [Benincasa hispida])

HSP 1 Score: 391.0 bits (1003), Expect = 6.3e-105
Identity = 193/198 (97.47%), Postives = 195/198 (98.48%), Query Frame = 0


Query: 1   MSVSRFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWD 60
           MSVSRFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWD
Sbjct: 1   MSVSRFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWD 60

Query: 61  TAGQEDYNRLRPLSYRGADVFLLAFSLISKASYENVAKKWIPELRHYAPGVPVILVGTKL 120
           TAGQEDYNRLRPLSYRGADVFLLAFSLIS+ASYENVAKKWIPELRHYAPGVPVILVGTKL
Sbjct: 61  TAGQEDYNRLRPLSYRGADVFLLAFSLISRASYENVAKKWIPELRHYAPGVPVILVGTKL 120

Query: 121 DLREDKQYLIEHPGVVPITNAQGEELRKLIGAPVYIECSSKTQQNVKAVFDAAIKVVLQP 180
           DLREDKQYLIEHPG+VPIT AQGEELRKLIGAPVYIECSSKTQQNVKAVFDAAIKVVLQP
Sbjct: 121 DLREDKQYLIEHPGIVPITTAQGEELRKLIGAPVYIECSSKTQQNVKAVFDAAIKVVLQP 180

Query: 181 PKRKKRKKRKAQKACSIL 199
           PKRKKRKKRK QK CSIL
Sbjct: 181 PKRKKRKKRKGQKTCSIL 198

[Close]

BLAST of Tan0012242.3 vs. NCBI nr
Match: XP_022146132.1 (rac-like GTP-binding protein RAC1 [Momordica charantia])

HSP 1 Score: 388.7 bits (997), Expect = 3.1e-104
Identity = 191/198 (96.46%), Postives = 196/198 (98.99%), Query Frame = 0


Query: 1   MSVSRFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWD 60
           MSVSRFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWD
Sbjct: 1   MSVSRFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWD 60

Query: 61  TAGQEDYNRLRPLSYRGADVFLLAFSLISKASYENVAKKWIPELRHYAPGVPVILVGTKL 120
           TAGQEDYNRLRPLSYRGADVFLLAFSLIS+ASYEN+AKKWIPELRHYAPGVPVILVGTKL
Sbjct: 61  TAGQEDYNRLRPLSYRGADVFLLAFSLISRASYENIAKKWIPELRHYAPGVPVILVGTKL 120

Query: 121 DLREDKQYLIEHPGVVPITNAQGEELRKLIGAPVYIECSSKTQQNVKAVFDAAIKVVLQP 180
           DLREDKQYLIEHPGVVPIT AQGEELRKLIGAP+YIECSSKTQQNVKAVFDAAIKVVLQP
Sbjct: 121 DLREDKQYLIEHPGVVPITTAQGEELRKLIGAPMYIECSSKTQQNVKAVFDAAIKVVLQP 180

Query: 181 PKRKKRKKRKAQKACSIL 199
           PKRKK+KKRK QK+CSIL
Sbjct: 181 PKRKKQKKRKTQKSCSIL 198

[Close]

BLAST of Tan0012242.3 vs. NCBI nr
Match: XP_002530817.1 (rac-like GTP-binding protein RAC1 [Ricinus communis] >EEF31557.1 rac gtpase, putative [Ricinus communis])

HSP 1 Score: 385.6 bits (989), Expect = 2.6e-103
Identity = 189/198 (95.45%), Postives = 195/198 (98.48%), Query Frame = 0


Query: 1   MSVSRFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWD 60
           MS SRFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWD
Sbjct: 1   MSASRFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWD 60

Query: 61  TAGQEDYNRLRPLSYRGADVFLLAFSLISKASYENVAKKWIPELRHYAPGVPVILVGTKL 120
           TAGQEDYNRLRPLSYRGADVFLLAFSLISKASYENVAKKWIPELRHYAPGVP+ILVGTKL
Sbjct: 61  TAGQEDYNRLRPLSYRGADVFLLAFSLISKASYENVAKKWIPELRHYAPGVPIILVGTKL 120

Query: 121 DLREDKQYLIEHPGVVPITNAQGEELRKLIGAPVYIECSSKTQQNVKAVFDAAIKVVLQP 180
           DLR+DKQ+LI+HPG VPIT AQGEELRKLIGAPVYIECSSKTQQNVKAVFDAAIKVVLQP
Sbjct: 121 DLRDDKQFLIDHPGAVPITTAQGEELRKLIGAPVYIECSSKTQQNVKAVFDAAIKVVLQP 180

Query: 181 PKRKKRKKRKAQKACSIL 199
           PK+KKRKKR+AQKACSIL
Sbjct: 181 PKQKKRKKRRAQKACSIL 198

[Close]

BLAST of Tan0012242.3 vs. ExPASy TrEMBL
Match: A0A6J1I5W1 (rac-like GTP-binding protein RAC1 OS=Cucurbita maxima OX=3661 GN=LOC111469876 PE=3 SV=1)

HSP 1 Score: 393.3 bits (1009), Expect = 6.1e-106
Identity = 195/198 (98.48%), Postives = 197/198 (99.49%), Query Frame = 0


Query: 1   MSVSRFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWD 60
           MSVSRFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWD
Sbjct: 1   MSVSRFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWD 60

Query: 61  TAGQEDYNRLRPLSYRGADVFLLAFSLISKASYENVAKKWIPELRHYAPGVPVILVGTKL 120
           TAGQEDYNRLRPLSYRGADVFLLAFSLISKASYENVAKKWIPELRHYAPGVPVILVGTKL
Sbjct: 61  TAGQEDYNRLRPLSYRGADVFLLAFSLISKASYENVAKKWIPELRHYAPGVPVILVGTKL 120

Query: 121 DLREDKQYLIEHPGVVPITNAQGEELRKLIGAPVYIECSSKTQQNVKAVFDAAIKVVLQP 180
           DLREDKQYLIEHPGVVPIT +QGEELRKLIGAPVYIECSSKTQQNVKAVFDAAIKVVLQP
Sbjct: 121 DLREDKQYLIEHPGVVPITTSQGEELRKLIGAPVYIECSSKTQQNVKAVFDAAIKVVLQP 180

Query: 181 PKRKKRKKRKAQKACSIL 199
           PKRKKRKKRKAQK+CSIL
Sbjct: 181 PKRKKRKKRKAQKSCSIL 198

[Close]

BLAST of Tan0012242.3 vs. ExPASy TrEMBL
Match: A0A6J1G6C3 (rac-like GTP-binding protein RAC1 OS=Cucurbita moschata OX=3662 GN=LOC111451274 PE=3 SV=1)

HSP 1 Score: 393.3 bits (1009), Expect = 6.1e-106
Identity = 195/198 (98.48%), Postives = 197/198 (99.49%), Query Frame = 0


Query: 1   MSVSRFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWD 60
           MSVSRFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWD
Sbjct: 1   MSVSRFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWD 60

Query: 61  TAGQEDYNRLRPLSYRGADVFLLAFSLISKASYENVAKKWIPELRHYAPGVPVILVGTKL 120
           TAGQEDYNRLRPLSYRGADVFLLAFSLISKASYENVAKKWIPELRHYAPGVPVILVGTKL
Sbjct: 61  TAGQEDYNRLRPLSYRGADVFLLAFSLISKASYENVAKKWIPELRHYAPGVPVILVGTKL 120

Query: 121 DLREDKQYLIEHPGVVPITNAQGEELRKLIGAPVYIECSSKTQQNVKAVFDAAIKVVLQP 180
           DLREDKQYLIEHPGVVPIT +QGEELRKLIGAPVYIECSSKTQQNVKAVFDAAIKVVLQP
Sbjct: 121 DLREDKQYLIEHPGVVPITTSQGEELRKLIGAPVYIECSSKTQQNVKAVFDAAIKVVLQP 180

Query: 181 PKRKKRKKRKAQKACSIL 199
           PKRKKRKKRKAQK+CSIL
Sbjct: 181 PKRKKRKKRKAQKSCSIL 198

[Close]

BLAST of Tan0012242.3 vs. ExPASy TrEMBL
Match: A0A1S3C7E5 (rac-like GTP-binding protein RAC1 OS=Cucumis melo OX=3656 GN=LOC103497331 PE=3 SV=1)

HSP 1 Score: 391.3 bits (1004), Expect = 2.3e-105
Identity = 194/198 (97.98%), Postives = 196/198 (98.99%), Query Frame = 0


Query: 1   MSVSRFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWD 60
           MSVSRFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWD
Sbjct: 1   MSVSRFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWD 60

Query: 61  TAGQEDYNRLRPLSYRGADVFLLAFSLISKASYENVAKKWIPELRHYAPGVPVILVGTKL 120
           TAGQEDYNRLRPLSYRGADVFLLAFSLIS+ASYENVAKKWIPELRHYAPGVPVILVGTKL
Sbjct: 61  TAGQEDYNRLRPLSYRGADVFLLAFSLISRASYENVAKKWIPELRHYAPGVPVILVGTKL 120

Query: 121 DLREDKQYLIEHPGVVPITNAQGEELRKLIGAPVYIECSSKTQQNVKAVFDAAIKVVLQP 180
           DLREDKQYL EHPG+VPIT AQGEELRKLIGAPVYIECSSKTQQNVKAVFDAAIKVVLQP
Sbjct: 121 DLREDKQYLNEHPGIVPITTAQGEELRKLIGAPVYIECSSKTQQNVKAVFDAAIKVVLQP 180

Query: 181 PKRKKRKKRKAQKACSIL 199
           PKRKKRKKRKAQKACSIL
Sbjct: 181 PKRKKRKKRKAQKACSIL 198

[Close]

BLAST of Tan0012242.3 vs. ExPASy TrEMBL
Match: A0A5D3BKK0 (Rac-like GTP-binding protein RAC1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold123G001120 PE=3 SV=1)

HSP 1 Score: 391.3 bits (1004), Expect = 2.3e-105
Identity = 194/198 (97.98%), Postives = 196/198 (98.99%), Query Frame = 0


Query: 1   MSVSRFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWD 60
           MSVSRFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWD
Sbjct: 1   MSVSRFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWD 60

Query: 61  TAGQEDYNRLRPLSYRGADVFLLAFSLISKASYENVAKKWIPELRHYAPGVPVILVGTKL 120
           TAGQEDYNRLRPLSYRGADVFLLAFSLIS+ASYENVAKKWIPELRHYAPGVPVILVGTKL
Sbjct: 61  TAGQEDYNRLRPLSYRGADVFLLAFSLISRASYENVAKKWIPELRHYAPGVPVILVGTKL 120

Query: 121 DLREDKQYLIEHPGVVPITNAQGEELRKLIGAPVYIECSSKTQQNVKAVFDAAIKVVLQP 180
           DLREDKQYL EHPG+VPIT AQGEELRKLIGAPVYIECSSKTQQNVKAVFDAAIKVVLQP
Sbjct: 121 DLREDKQYLNEHPGIVPITTAQGEELRKLIGAPVYIECSSKTQQNVKAVFDAAIKVVLQP 180

Query: 181 PKRKKRKKRKAQKACSIL 199
           PKRKKRKKRKAQKACSIL
Sbjct: 181 PKRKKRKKRKAQKACSIL 198

[Close]

BLAST of Tan0012242.3 vs. ExPASy TrEMBL
Match: A0A0A0LJG3 (Rac-type small GTP-binding protein OS=Cucumis sativus OX=3659 GN=Csa_2G270750 PE=3 SV=1)

HSP 1 Score: 391.3 bits (1004), Expect = 2.3e-105
Identity = 194/198 (97.98%), Postives = 196/198 (98.99%), Query Frame = 0


Query: 1   MSVSRFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWD 60
           MSVSRFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWD
Sbjct: 1   MSVSRFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWD 60

Query: 61  TAGQEDYNRLRPLSYRGADVFLLAFSLISKASYENVAKKWIPELRHYAPGVPVILVGTKL 120
           TAGQEDYNRLRPLSYRGADVFLLAFSLIS+ASYENVAKKWIPELRHYAPGVPVILVGTKL
Sbjct: 61  TAGQEDYNRLRPLSYRGADVFLLAFSLISRASYENVAKKWIPELRHYAPGVPVILVGTKL 120

Query: 121 DLREDKQYLIEHPGVVPITNAQGEELRKLIGAPVYIECSSKTQQNVKAVFDAAIKVVLQP 180
           DLREDKQYL EHPG+VPIT AQGEELRKLIGAPVYIECSSKTQQNVKAVFDAAIKVVLQP
Sbjct: 121 DLREDKQYLNEHPGIVPITTAQGEELRKLIGAPVYIECSSKTQQNVKAVFDAAIKVVLQP 180

Query: 181 PKRKKRKKRKAQKACSIL 199
           PKRKKRKKRKAQKACSIL
Sbjct: 181 PKRKKRKKRKAQKACSIL 198

[Close]

BLAST of Tan0012242.3 vs. TAIR 10
Match: AT4G35020.1 (RAC-like 3 )

HSP 1 Score: 369.8 bits (948), Expect = 1.4e-102
Identity = 175/198 (88.38%), Postives = 190/198 (95.96%), Query Frame = 0


Query: 1   MSVSRFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWD 60
           MS SRFIKCVTVGDGAVGKTC+LISYTSNTFPTDYVPTVFDNFSANV+VDG+T+NLGLWD
Sbjct: 1   MSASRFIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVIVDGNTINLGLWD 60

Query: 61  TAGQEDYNRLRPLSYRGADVFLLAFSLISKASYENVAKKWIPELRHYAPGVPVILVGTKL 120
           TAGQEDYNRLRPLSYRGADVFLLAFSL+SKASYENV+KKW+PELRHYAPGVP+ILVGTKL
Sbjct: 61  TAGQEDYNRLRPLSYRGADVFLLAFSLVSKASYENVSKKWVPELRHYAPGVPIILVGTKL 120

Query: 121 DLREDKQYLIEHPGVVPITNAQGEELRKLIGAPVYIECSSKTQQNVKAVFDAAIKVVLQP 180
           DLR+DKQ+  EHPG VPI+ AQGEEL+KLIGAP YIECS+KTQQNVKAVFDAAIKVVLQP
Sbjct: 121 DLRDDKQFFAEHPGAVPISTAQGEELKKLIGAPAYIECSAKTQQNVKAVFDAAIKVVLQP 180

Query: 181 PKRKKRKKRKAQKACSIL 199
           PK KK+KKRK+QK CSIL
Sbjct: 181 PKNKKKKKRKSQKGCSIL 198

[Close]

BLAST of Tan0012242.3 vs. TAIR 10
Match: AT4G35020.2 (RAC-like 3 )

HSP 1 Score: 369.8 bits (948), Expect = 1.4e-102
Identity = 175/198 (88.38%), Postives = 190/198 (95.96%), Query Frame = 0


Query: 1   MSVSRFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWD 60
           MS SRFIKCVTVGDGAVGKTC+LISYTSNTFPTDYVPTVFDNFSANV+VDG+T+NLGLWD
Sbjct: 1   MSASRFIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVIVDGNTINLGLWD 60

Query: 61  TAGQEDYNRLRPLSYRGADVFLLAFSLISKASYENVAKKWIPELRHYAPGVPVILVGTKL 120
           TAGQEDYNRLRPLSYRGADVFLLAFSL+SKASYENV+KKW+PELRHYAPGVP+ILVGTKL
Sbjct: 61  TAGQEDYNRLRPLSYRGADVFLLAFSLVSKASYENVSKKWVPELRHYAPGVPIILVGTKL 120

Query: 121 DLREDKQYLIEHPGVVPITNAQGEELRKLIGAPVYIECSSKTQQNVKAVFDAAIKVVLQP 180
           DLR+DKQ+  EHPG VPI+ AQGEEL+KLIGAP YIECS+KTQQNVKAVFDAAIKVVLQP
Sbjct: 121 DLRDDKQFFAEHPGAVPISTAQGEELKKLIGAPAYIECSAKTQQNVKAVFDAAIKVVLQP 180

Query: 181 PKRKKRKKRKAQKACSIL 199
           PK KK+KKRK+QK CSIL
Sbjct: 181 PKNKKKKKRKSQKGCSIL 198

[Close]

BLAST of Tan0012242.3 vs. TAIR 10
Match: AT4G35020.3 (RAC-like 3 )

HSP 1 Score: 369.8 bits (948), Expect = 1.4e-102
Identity = 175/198 (88.38%), Postives = 190/198 (95.96%), Query Frame = 0


Query: 1   MSVSRFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWD 60
           MS SRFIKCVTVGDGAVGKTC+LISYTSNTFPTDYVPTVFDNFSANV+VDG+T+NLGLWD
Sbjct: 1   MSASRFIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVIVDGNTINLGLWD 60

Query: 61  TAGQEDYNRLRPLSYRGADVFLLAFSLISKASYENVAKKWIPELRHYAPGVPVILVGTKL 120
           TAGQEDYNRLRPLSYRGADVFLLAFSL+SKASYENV+KKW+PELRHYAPGVP+ILVGTKL
Sbjct: 61  TAGQEDYNRLRPLSYRGADVFLLAFSLVSKASYENVSKKWVPELRHYAPGVPIILVGTKL 120

Query: 121 DLREDKQYLIEHPGVVPITNAQGEELRKLIGAPVYIECSSKTQQNVKAVFDAAIKVVLQP 180
           DLR+DKQ+  EHPG VPI+ AQGEEL+KLIGAP YIECS+KTQQNVKAVFDAAIKVVLQP
Sbjct: 121 DLRDDKQFFAEHPGAVPISTAQGEELKKLIGAPAYIECSAKTQQNVKAVFDAAIKVVLQP 180

Query: 181 PKRKKRKKRKAQKACSIL 199
           PK KK+KKRK+QK CSIL
Sbjct: 181 PKNKKKKKRKSQKGCSIL 198

[Close]

BLAST of Tan0012242.3 vs. TAIR 10
Match: AT3G51300.1 (RHO-related protein from plants 1 )

HSP 1 Score: 363.2 bits (931), Expect = 1.3e-100
Identity = 176/198 (88.89%), Postives = 190/198 (95.96%), Query Frame = 0


Query: 1   MSVSRFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWD 60
           MS SRF+KCVTVGDGAVGKTC+LISYTSNTFPTDYVPTVFDNFSANVVV+GSTVNLGLWD
Sbjct: 1   MSASRFVKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVNGSTVNLGLWD 60

Query: 61  TAGQEDYNRLRPLSYRGADVFLLAFSLISKASYENVAKKWIPELRHYAPGVPVILVGTKL 120
           TAGQEDYNRLRPLSYRGADVF+LAFSLISKASYENV+KKWIPEL+HYAPGVP++LVGTKL
Sbjct: 61  TAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPGVPIVLVGTKL 120

Query: 121 DLREDKQYLIEHPGVVPITNAQGEELRKLIGAPVYIECSSKTQQNVKAVFDAAIKVVLQP 180
           DLR+DKQ+ I+HPG VPIT AQGEELRK IGAP YIECSSKTQ+NVKAVFDAAI+VVLQP
Sbjct: 121 DLRDDKQFFIDHPGAVPITTAQGEELRKQIGAPTYIECSSKTQENVKAVFDAAIRVVLQP 180

Query: 181 PKRKKRKKRKAQKACSIL 199
           PK+KK KK KAQKACSIL
Sbjct: 181 PKQKK-KKSKAQKACSIL 197

[Close]

BLAST of Tan0012242.3 vs. TAIR 10
Match: AT2G17800.1 (Arabidopsis RAC-like 1 )

HSP 1 Score: 362.1 bits (928), Expect = 2.9e-100
Identity = 175/198 (88.38%), Postives = 190/198 (95.96%), Query Frame = 0


Query: 1   MSVSRFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWD 60
           MS SRFIKCVTVGDGAVGKTC+LISYTSNTFPTDYVPTVFDNFSANVVV+G+TVNLGLWD
Sbjct: 1   MSASRFIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVNGATVNLGLWD 60

Query: 61  TAGQEDYNRLRPLSYRGADVFLLAFSLISKASYENVAKKWIPELRHYAPGVPVILVGTKL 120
           TAGQEDYNRLRPLSYRGADVF+LAFSLISKASYENV+KKWIPEL+HYAPGVP++LVGTKL
Sbjct: 61  TAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPGVPIVLVGTKL 120

Query: 121 DLREDKQYLIEHPGVVPITNAQGEELRKLIGAPVYIECSSKTQQNVKAVFDAAIKVVLQP 180
           DLR+DKQ+ I+HPG VPIT AQGEEL+KLIGAP YIECSSKTQ+NVK VFDAAI+VVLQP
Sbjct: 121 DLRDDKQFFIDHPGAVPITTAQGEELKKLIGAPAYIECSSKTQENVKGVFDAAIRVVLQP 180

Query: 181 PKRKKRKKRKAQKACSIL 199
           PK+KK KK KAQKACSIL
Sbjct: 181 PKQKK-KKSKAQKACSIL 197

The following BLAST results are available for this feature:

BLAST of Tan0012242.3 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O04369	2.0e-101	91.41	Rac-like GTP-binding protein RAC1 OS=Lotus japonicus OX=34305 GN=RAC1 PE=2 SV=1	[more]
Q38912	2.0e-101	88.38	Rac-like GTP-binding protein ARAC3 OS=Arabidopsis thaliana OX=3702 GN=ARAC3 PE=1...	[more]
Q6EP31	1.7e-100	90.40	Rac-like GTP-binding protein 5 OS=Oryza sativa subsp. japonica OX=39947 GN=RAC5 ...	[more]
Q39435	2.2e-100	90.40	Rac-like GTP-binding protein RHO1 OS=Beta vulgaris OX=161934 GN=RHO1 PE=2 SV=1	[more]
P92978	1.8e-99	88.89	Rac-like GTP-binding protein ARAC11 OS=Arabidopsis thaliana OX=3702 GN=ARAC11 PE...	[more]

BLAST of Tan0012242.3 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022947397.1	1.3e-105	98.48	rac-like GTP-binding protein RAC1 [Cucurbita moschata] >XP_022971108.1 rac-like ...	[more]
XP_004147042.1	4.8e-105	97.98	rac-like GTP-binding protein RAC1 [Cucumis sativus] >XP_008457691.1 PREDICTED: r...	[more]
XP_038902146.1	6.3e-105	97.47	rac-like GTP-binding protein RAC1 [Benincasa hispida]	[more]
XP_022146132.1	3.1e-104	96.46	rac-like GTP-binding protein RAC1 [Momordica charantia]	[more]
XP_002530817.1	2.6e-103	95.45	rac-like GTP-binding protein RAC1 [Ricinus communis] >EEF31557.1 rac gtpase, put...	[more]

BLAST of Tan0012242.3 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1I5W1	6.1e-106	98.48	rac-like GTP-binding protein RAC1 OS=Cucurbita maxima OX=3661 GN=LOC111469876 PE...	[more]
A0A6J1G6C3	6.1e-106	98.48	rac-like GTP-binding protein RAC1 OS=Cucurbita moschata OX=3662 GN=LOC111451274 ...	[more]
A0A1S3C7E5	2.3e-105	97.98	rac-like GTP-binding protein RAC1 OS=Cucumis melo OX=3656 GN=LOC103497331 PE=3 S...	[more]
A0A5D3BKK0	2.3e-105	97.98	Rac-like GTP-binding protein RAC1 OS=Cucumis melo var. makuwa OX=1194695 GN=E567...	[more]
A0A0A0LJG3	2.3e-105	97.98	Rac-type small GTP-binding protein OS=Cucumis sativus OX=3659 GN=Csa_2G270750 PE...	[more]

BLAST of Tan0012242.3 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G35020.1	1.4e-102	88.38	RAC-like 3	[more]
AT4G35020.2	1.4e-102	88.38	RAC-like 3	[more]
AT4G35020.3	1.4e-102	88.38	RAC-like 3	[more]
AT3G51300.1	1.3e-100	88.89	RHO-related protein from plants 1	[more]
AT2G17800.1	2.9e-100	88.38	Arabidopsis RAC-like 1	[more]

InterPro

Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PRINTS	PR00449	RASTRNSFRMNG	coord: 30..46 score: 32.14 coord: 47..69 score: 49.26 coord: 7..28 score: 44.74 coord: 155..177 score: 34.52 coord: 109..122 score: 50.29
None	No IPR available	SMART	SM00173	ras_sub_4	coord: 4..180 e-value: 1.5E-19 score: 81.0
None	No IPR available	SMART	SM00175	rab_sub_5	coord: 7..180 e-value: 4.7E-26 score: 102.6
None	No IPR available	PANTHER	PTHR24072:SF336	RAC-LIKE GTP-BINDING PROTEIN 5	coord: 1..198
None	No IPR available	PROSITE	PS51419	RAB	coord: 2..198 score: 19.88633
None	No IPR available	PROSITE	PS51420	RHO	coord: 1..177 score: 25.009665
None	No IPR available	CDD	cd04133	Rop_like	coord: 6..178 e-value: 4.36859E-136 score: 376.109
IPR001806	Small GTPase	SMART	SM00174	rho_sub_3	coord: 9..180 e-value: 8.6E-114 score: 394.0
IPR001806	Small GTPase	PFAM	PF00071	Ras	coord: 8..178 e-value: 2.8E-50 score: 170.1
IPR001806	Small GTPase	PROSITE	PS51421	RAS	coord: 2..198 score: 16.534624
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	3.40.50.300		coord: 2..198 e-value: 1.5E-71 score: 241.8
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 6..178
IPR005225	Small GTP-binding protein domain	TIGRFAM	TIGR00231	TIGR00231	coord: 7..171 e-value: 3.9E-34 score: 115.7
IPR003578	Small GTPase Rho	PANTHER	PTHR24072	RHO FAMILY GTPASE	coord: 1..198

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Tan0012242	Tan0012242	gene

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Tan0012242.3-three_prime_utr	Tan0012242.3-three_prime_utr-LG05:10171347..10171912	three_prime_UTR

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Tan0012242.3-exon	Tan0012242.3-exon-LG05:10171347..10172017	exon
Tan0012242.3-exon	Tan0012242.3-exon-LG05:10172102..10172167	exon
Tan0012242.3-exon	Tan0012242.3-exon-LG05:10172311..10172375	exon
Tan0012242.3-exon	Tan0012242.3-exon-LG05:10172822..10172885	exon
Tan0012242.3-exon	Tan0012242.3-exon-LG05:10172989..10173098	exon
Tan0012242.3-exon	Tan0012242.3-exon-LG05:10173169..10173256	exon
Tan0012242.3-exon	Tan0012242.3-exon-LG05:10174171..10174878	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Tan0012242.3-cds	Tan0012242.3-cds-LG05:10171913..10172017	CDS
Tan0012242.3-cds	Tan0012242.3-cds-LG05:10172102..10172167	CDS
Tan0012242.3-cds	Tan0012242.3-cds-LG05:10172311..10172375	CDS
Tan0012242.3-cds	Tan0012242.3-cds-LG05:10172822..10172885	CDS
Tan0012242.3-cds	Tan0012242.3-cds-LG05:10172989..10173098	CDS
Tan0012242.3-cds	Tan0012242.3-cds-LG05:10173169..10173256	CDS
Tan0012242.3-cds	Tan0012242.3-cds-LG05:10174171..10174269	CDS

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Tan0012242.3-five_prime_utr	Tan0012242.3-five_prime_utr-LG05:10174270..10174878	five_prime_UTR

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Tan0012242.3	Tan0012242.3-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0007264	small GTPase mediated signal transduction
biological_process	GO:0007015	actin filament organization
biological_process	GO:0030865	cortical cytoskeleton organization
biological_process	GO:0007163	establishment or maintenance of cell polarity
biological_process	GO:0032956	regulation of actin cytoskeleton organization
biological_process	GO:0008360	regulation of cell shape
cellular_component	GO:0005938	cell cortex
cellular_component	GO:0042995	cell projection
cellular_component	GO:0031410	cytoplasmic vesicle
cellular_component	GO:0005856	cytoskeleton
cellular_component	GO:0005634	nucleus
cellular_component	GO:0005886	plasma membrane
molecular_function	GO:0003924	GTPase activity
molecular_function	GO:0005525	GTP binding
molecular_function	GO:0019901	protein kinase binding
molecular_function	GO:0004767	sphingomyelin phosphodiesterase activity