Tan0012242 (gene) Snake gourd v1

Overview


Name	Tan0012242
Type	gene
Organism	Trichosanthes anguina (Snake gourd v1)
Description	RAC-like GTP binding protein 5
Location	LG05: 10171347 .. 10174878 (-)
RNA-Seq Expression	Tan0012242
Synteny	Tan0012242

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CGGTAAACCAAATCAAATGTAAAATACCCCTTTTTTTTGTTTCAATTCTAGAATAATTTCATAAATTGAAATCAAAATCTCCACATTTTCATACTCAAACAAAATCTTTGGTTGCGACCCGTGTCTTCCTTCAAAAAGAAGAAAATAACAACCAAAGAGAATACCTTTCTTTCTTTAAAGAGGAGATTGAGAAAGAAAATTAGTCGAAGTGAAAGAAAAAAAAAAGTTACCCAAAGGTGAAGAGCGAGCTAAAGAAGAGAGAGGACCGAGAGCGACAAGTTTGACTTCAACATCTATTGATTGGTAAAAAAATTTCCAATTTCCTTCCAACCCAGAACGGTAGAATTGAAAGAGTGCTTTCAATTTCAATTTTCAGATCGTGATTTTTACTCTGCCATAGCTGGCCAAGAGCTGGCCTCCCCTCTTTATAGACCCAGTTGCCTTGTCTTTGTGACTTTCCCTCTCTCTCCCACGGGTACATACAATTTCCTTTGTGACCCCTTTGTAAATGTGCCTGGATTTGTGGGTTAACTCCACTTTTATCTCTTTTCCCCTGTGTGTTACTGATTCTGCATTGGTAGACTTTCGAACGGAGCTCTGAAGGAGGAAATGAGTGTTTCAAGGTTCATAAAGTGTGTTACGGTTGGTGATGGTGCTGTTGGGAAAACTTGTATGCTTATCTCCTACACCAGCAATACTTTCCCCACGGTGAGCTACTTTAGCTTTAATTTTTCCTTTTTTTTTCTTGTTCTTGTTTGGTTTCTGGGAAAATTTGGGTTATTGAGTTAGTTCTGAGAGGGTTTTGTTGTTGACTAATGGACTTCAGTTTCTGCACTTTTTGAGCTAAGAATGCTTCTTTCTTTTCTGGGGTTTTGCGCATTTTGCCTTTTGTTTCAGTGAACCCTTTTTTAAGCTCCTTGTGTTTGGGTTCTTGGTTTCTGAAGAACAAATCTGTTGTATTTTTGTTGTCGTTTTTTCGTGTCTTTGTTTGCTTTCTTGCCCATGGAAGCAAAGAAAATTTCATCCACATGTTTGGTGGAACACGAATCTTTTGGAGTTGCAGGTCCCCTCGAGCAATTTCAGCCTCTTTTCAGTCTACTAGTTGTTGCAGGAAGATTCTCACATGAGGAGATTTCTAAATTCTGGCCTTTTGAGTCTTTGACCATGTCTTCCCTTCCAAACAAATGGGAGTGAATTATGGTTTCATTTTCGTTTGTGTAGCAATTTCTTGCTCTTTATGACTAATTGTTTGCTGTTTTCAGTACACTTTTGTTTGTGCATTCATGTGCCTCTCTTTGTTTTACTGGTAGAGAGGCCATCCAAACATTTTGGTGTTCTTAGTGTAAATACAGAATCTGCATTTTTAGCTGTAAGCATATCCTCCATGAAACTGTACTTTTGCCTGGTATCAGATCTCCATCCGTCTGTGTGTGTGATTTGGGGAAAACTTTTGCAATGTCGAAATCTTGATGATTTATCTGTCTTCCATTTTTAAATTTGTTCAATAAGGTGTCTTGATTTGCAGATTGTAGCTAAGATGCATAAGGTTTTGCATGTTTTAGATTCTTAAGTTCTGTGAAATTGTTATCCATCTATAATGACTGGGGAATACTCTGAAACAGGATTACGTGCCAACTGTTTTCGATAATTTTAGTGCAAATGTGGTTGTGGATGGCAGCACGGTCAACCTAGGCTTGTGGGATACTGCCGGTATGTTAAAAACGAGTTCTTACATAACTTTCTTTCTTGCTGAGTATCTGATGTATGAATCATGAACCAGGCCAGGAAGATTACAATAGATTGAGGCCTTTGAGCTACCGTGGAGCAGATGTATTTCTGCTAGCATTCTCTCTCATAAGCAAGGCTAGCTACGAAAATGTCGCCAAAAAAGTAAGCCTCTGCTTTATCTTCGTCAGTTGAACTTATCTTTCATTCCGTTTGTTTCAATGTTTCTGGTTCCAATTTTAGCTAATATACTTCTTTCCCATGACAGTGGATTCCTGAACTAAGGCATTATGCTCCTGGTGTACCAGTTATTCTCGTCGGGACTAAGCTCGGTTATATTCTTCACTACCTTTCTAGTTTTCTCCTTTTAAGTGTTGCATTTGAAAAAACGTTCTTGTTCCATTTGTTTGCTGATGATTGTTTCTAAGTACAAGGTGTTATAATTCTGTGTTACACAAGGAACATACCCTGATGAACTACATGAAACAACATTACTGTTAATAAGATCTGGCGTCAGTTGATACAGTTTCTTTTACCTAAGGAACGGAATAGGTTACTTGCTATGCAACGAAAATGTGGTTATTACTCTGCATTTGGCTTATTAAGTATCATAGTTGACTAGCTTGTACCATTAAAGACCCTGGAAGAAGTCAGTTGAATAACCCAAGCACCATCTTTAACTCTCTTGGAACAGTAGTGTTTTTGATAAATATCGTATTCTTGTGCGCACTCGATGTGGGATTATTGATAATCATGAGTATCAACTTGCTTCATGTAGATCTTCGAGAAGATAAACAATACCTCATTGAACACCCAGGGGTTGTGCCCATTACCAACGCCCAGGTATCCTGCAATGTAACCCTGTATTTACGAGTTCCATATTACAATATTAGTCCTGTGTCATAGTTTTGTTCGTCTTTTACAGTCCGGTTTAGTTATCTCCTTCTCATCTCTCCCTTATTTTAAGATTTCAACTTTTCTTGTAGGGGGAGGAACTGAGGAAACTTATCGGTGCCCCAGTTTACATTGAATGCAGTTCGAAAACACAGCAAGTATGAAGAATCCACTCCTTCTCTCTCTACTCTCTCCGATCTCTCGCTCCTTAACAAATTCTTTCATTATTGATCCGAATGCAGAATGTGAAAGCAGTTTTCGACGCAGCAATCAAAGTGGTTCTCCAGCCTCCAAAGCGGAAGAAGCGAAAGAAGAGAAAGGCACAGAAGGCGTGTTCTATATTATGATGCAAAGTCAGTTGTATCACAACCGGTTAGAATTCGAAGACATATTAGTAAGCTACTCATCATTTAGCTCCTAACTATCACTATATGAGTTCTATTTTCACATTGTCCTTAACGCAACCCTGCAATCGAGCAGCAAATCTCATCCTCTGTGCTTGCCTTCTCTCTGGGTTGTGCTATGATTTGTAAAAAGTGTTTTAAATTCATCTGTCTAATATGCATGATGATAGTATATGTTCGAGTTTAGATATCTTCCATGTAACTGATCTCGAGTTAGTAACGATTAAGCTCTGTATGTCGTCCTGCATCAATATATTGTAATGTTCTTGGATGCTTTTCATCTATCAGTTGGTTAGAATCATCTTTCCAGAAAGTTGGGTGACTGTGGAACAAAGCTTTCCATTGATTGACATTTAGAAGCCTTTATTTTGGTTTAACAGTCTCTGGATCTGGAGTAATGTTTGACTGGAACAATATGTAGGCTTGTACTATGAACTGATTTTCTACCATTAGTTTGTATGTAATATTGAGACTTCATATTTGTATGATATTATCAGATTTGGACTTAA

mRNA sequence

CGGTAAACCAAATCAAATGTAAAATACCCCTTTTTTTTGTTTCAATTCTAGAATAATTTCATAAATTGAAATCAAAATCTCCACATTTTCATACTCAAACAAAATCTTTGGTTGCGACCCGTGTCTTCCTTCAAAAAGAAGAAAATAACAACCAAAGAGAATACCTTTCTTTCTTTAAAGAGGAGATTGAGAAAGAAAATTAGTCGAAGTGAAAGAAAAAAAAAAGTTACCCAAAGGTGAAGAGCGAGCTAAAGAAGAGAGAGGACCGAGAGCGACAAGTTTGACTTCAACATCTATTGATTGGTAAAAAAATTTCCAATTTCCTTCCAACCCAGAACGGTAGAATTGAAAGAGTGCTTTCAATTTCAATTTTCAGATCGTGATTTTTACTCTGCCATAGCTGGCCAAGAGCTGGCCTCCCCTCTTTATAGACCCAGTTGCCTTGTCTTTGTGACTTTCCCTCTCTCTCCCACGGGTACATACAATTTCCTTTGTGACCCCTTTGTAAATGTGCCTGGATTTGTGGGTTAACTCCACTTTTATCTCTTTTCCCCTGTGTGTTACTGATTCTGCATTGGTAGACTTTCGAACGGAGCTCTGAAGGAGGAAATGAGTGTTTCAAGGTTCATAAAGTGTGTTACGGTTGGTGATGGTGCTGTTGGGAAAACTTGTATGCTTATCTCCTACACCAGCAATACTTTCCCCACGGATTACGTGCCAACTGTTTTCGATAATTTTAGTGCAAATGTGGTTGTGGATGGCAGCACGGTCAACCTAGGCTTGTGGGATACTGCCGGCCAGGAAGATTACAATAGATTGAGGCCTTTGAGCTACCGTGGAGCAGATGTATTTCTGCTAGCATTCTCTCTCATAAGCAAGGCTAGCTACGAAAATGTCGCCAAAAAATGGATTCCTGAACTAAGGCATTATGCTCCTGGTGTACCAGTTATTCTCGTCGGGACTAAGCTCGATCTTCGAGAAGATAAACAATACCTCATTGAACACCCAGGGGTTGTGCCCATTACCAACGCCCAGGGGGAGGAACTGAGGAAACTTATCGGTGCCCCAGTTTACATTGAATGCAGTTCGAAAACACAGCAAAATGTGAAAGCAGTTTTCGACGCAGCAATCAAAGTGGTTCTCCAGCCTCCAAAGCGGAAGAAGCGAAAGAAGAGAAAGGCACAGAAGGCGTGTTCTATATTATGATGCAAAGTCAGTTGTATCACAACCGGTTAGAATTCGAAGACATATTATTGGTTAGAATCATCTTTCCAGAAAGTTGGGTGACTGTGGAACAAAGCTTTCCATTGATTGACATTTAGAAGCCTTTATTTTGGTTTAACAGTCTCTGGATCTGGAGTAATGTTTGACTGGAACAATATGTAGGCTTGTACTATGAACTGATTTTCTACCATTAGTTTGTATGTAATATTGAGACTTCATATTTGTATGATATTATCAGATTTGGACTTAA

Coding sequence (CDS)

ATGAGTGTTTCAAGGTTCATAAAGTGTGTTACGGTTGGTGATGGTGCTGTTGGGAAAACTTGTATGCTTATCTCCTACACCAGCAATACTTTCCCCACGGATTACGTGCCAACTGTTTTCGATAATTTTAGTGCAAATGTGGTTGTGGATGGCAGCACGGTCAACCTAGGCTTGTGGGATACTGCCGGCCAGGAAGATTACAATAGATTGAGGCCTTTGAGCTACCGTGGAGCAGATGTATTTCTGCTAGCATTCTCTCTCATAAGCAAGGCTAGCTACGAAAATGTCGCCAAAAAATGGATTCCTGAACTAAGGCATTATGCTCCTGGTGTACCAGTTATTCTCGTCGGGACTAAGCTCGATCTTCGAGAAGATAAACAATACCTCATTGAACACCCAGGGGTTGTGCCCATTACCAACGCCCAGGGGGAGGAACTGAGGAAACTTATCGGTGCCCCAGTTTACATTGAATGCAGTTCGAAAACACAGCAAAATGTGAAAGCAGTTTTCGACGCAGCAATCAAAGTGGTTCTCCAGCCTCCAAAGCGGAAGAAGCGAAAGAAGAGAAAGGCACAGAAGGCGTGTTCTATATTATGA

Protein sequence

MSVSRFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFLLAFSLISKASYENVAKKWIPELRHYAPGVPVILVGTKLDLREDKQYLIEHPGVVPITNAQGEELRKLIGAPVYIECSSKTQQNVKAVFDAAIKVVLQPPKRKKRKKRKAQKACSIL

Homology

[Close]

BLAST of Tan0012242 vs. ExPASy Swiss-Prot
Match: O04369 (Rac-like GTP-binding protein RAC1 OS=Lotus japonicus OX=34305 GN=RAC1 PE=2 SV=1)

HSP 1 Score: 369.8 bits (948), Expect = 2.0e-101
Identity = 181/198 (91.41%), Postives = 191/198 (96.46%), Query Frame = 0


Query: 1   MSVSRFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWD 60
           MS SRFIKCVTVGDGAVGKTC+LISYTSNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWD
Sbjct: 1   MSASRFIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWD 60

Query: 61  TAGQEDYNRLRPLSYRGADVFLLAFSLISKASYENVAKKWIPELRHYAPGVPVILVGTKL 120
           TAGQEDYNRLRPLSYRGADVF+LAFSLISKASYEN+AKKWIPELRHYAPGVP+ILVGTKL
Sbjct: 61  TAGQEDYNRLRPLSYRGADVFILAFSLISKASYENIAKKWIPELRHYAPGVPIILVGTKL 120

Query: 121 DLREDKQYLIEHPGVVPITNAQGEELRKLIGAPVYIECSSKTQQNVKAVFDAAIKVVLQP 180
           DLR+DK +L +HPG VPIT AQGEELRKLIGAP YIECSSKTQQNVKAVFDAAIKVVLQP
Sbjct: 121 DLRDDKHFLADHPGAVPITTAQGEELRKLIGAPAYIECSSKTQQNVKAVFDAAIKVVLQP 180

Query: 181 PKRKKRKKRKAQKACSIL 199
           PK+KK KKR+AQK+CSIL
Sbjct: 181 PKQKK-KKREAQKSCSIL 197

[Close]

BLAST of Tan0012242 vs. ExPASy Swiss-Prot
Match: Q38912 (Rac-like GTP-binding protein ARAC3 OS=Arabidopsis thaliana OX=3702 GN=ARAC3 PE=1 SV=1)

HSP 1 Score: 369.8 bits (948), Expect = 2.0e-101
Identity = 175/198 (88.38%), Postives = 190/198 (95.96%), Query Frame = 0


Query: 1   MSVSRFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWD 60
           MS SRFIKCVTVGDGAVGKTC+LISYTSNTFPTDYVPTVFDNFSANV+VDG+T+NLGLWD
Sbjct: 1   MSASRFIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVIVDGNTINLGLWD 60

Query: 61  TAGQEDYNRLRPLSYRGADVFLLAFSLISKASYENVAKKWIPELRHYAPGVPVILVGTKL 120
           TAGQEDYNRLRPLSYRGADVFLLAFSL+SKASYENV+KKW+PELRHYAPGVP+ILVGTKL
Sbjct: 61  TAGQEDYNRLRPLSYRGADVFLLAFSLVSKASYENVSKKWVPELRHYAPGVPIILVGTKL 120

Query: 121 DLREDKQYLIEHPGVVPITNAQGEELRKLIGAPVYIECSSKTQQNVKAVFDAAIKVVLQP 180
           DLR+DKQ+  EHPG VPI+ AQGEEL+KLIGAP YIECS+KTQQNVKAVFDAAIKVVLQP
Sbjct: 121 DLRDDKQFFAEHPGAVPISTAQGEELKKLIGAPAYIECSAKTQQNVKAVFDAAIKVVLQP 180

Query: 181 PKRKKRKKRKAQKACSIL 199
           PK KK+KKRK+QK CSIL
Sbjct: 181 PKNKKKKKRKSQKGCSIL 198

[Close]

BLAST of Tan0012242 vs. ExPASy Swiss-Prot
Match: Q6EP31 (Rac-like GTP-binding protein 5 OS=Oryza sativa subsp. japonica OX=39947 GN=RAC5 PE=2 SV=2)

HSP 1 Score: 366.7 bits (940), Expect = 1.7e-100
Identity = 179/198 (90.40%), Postives = 190/198 (95.96%), Query Frame = 0


Query: 1   MSVSRFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWD 60
           MS SRFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWD
Sbjct: 1   MSASRFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWD 60

Query: 61  TAGQEDYNRLRPLSYRGADVFLLAFSLISKASYENVAKKWIPELRHYAPGVPVILVGTKL 120
           TAGQEDYNRLRPLSYRGADVFLLAFSLISKASYENV+KKWIPELRHYAPGVP+ILVGTKL
Sbjct: 61  TAGQEDYNRLRPLSYRGADVFLLAFSLISKASYENVSKKWIPELRHYAPGVPIILVGTKL 120

Query: 121 DLREDKQYLIEHPGVVPITNAQGEELRKLIGAPVYIECSSKTQQNVKAVFDAAIKVVLQP 180
           DLR+DKQ+ ++HPG VPI+ AQGEELRKLIGA  YIECSSKTQQN+KAVFDAAIKVVLQP
Sbjct: 121 DLRDDKQFFVDHPGAVPISTAQGEELRKLIGAAAYIECSSKTQQNIKAVFDAAIKVVLQP 180

Query: 181 PKRKKRKKRKAQKACSIL 199
           PK+KK KK+KAQK C+IL
Sbjct: 181 PKQKK-KKKKAQKGCAIL 197

[Close]

BLAST of Tan0012242 vs. ExPASy Swiss-Prot
Match: Q39435 (Rac-like GTP-binding protein RHO1 OS=Beta vulgaris OX=161934 GN=RHO1 PE=2 SV=1)

HSP 1 Score: 366.3 bits (939), Expect = 2.2e-100
Identity = 179/198 (90.40%), Postives = 190/198 (95.96%), Query Frame = 0


Query: 1   MSVSRFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWD 60
           MS SRFIKCVTVGDGAVGKTC+LISYTSNTFPTDYVPTVFDNFSANVVV+G+TVNLGLWD
Sbjct: 1   MSASRFIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVNGATVNLGLWD 60

Query: 61  TAGQEDYNRLRPLSYRGADVFLLAFSLISKASYENVAKKWIPELRHYAPGVPVILVGTKL 120
           TAGQEDYNRLRPLSYRGADVF+LAFSLISKASYENV+KKWIPEL+HYAPGVP++LVGTKL
Sbjct: 61  TAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPGVPIVLVGTKL 120

Query: 121 DLREDKQYLIEHPGVVPITNAQGEELRKLIGAPVYIECSSKTQQNVKAVFDAAIKVVLQP 180
           DLR+DKQ+ I+HPG VPIT AQGEELRKLIGAP YIECSSKTQQNVKAVFDAAIKVVLQP
Sbjct: 121 DLRDDKQFFIDHPGAVPITTAQGEELRKLIGAPAYIECSSKTQQNVKAVFDAAIKVVLQP 180

Query: 181 PKRKKRKKRKAQKACSIL 199
           PK KK KK KAQKACSIL
Sbjct: 181 PKTKK-KKSKAQKACSIL 197

[Close]

BLAST of Tan0012242 vs. ExPASy Swiss-Prot
Match: P92978 (Rac-like GTP-binding protein ARAC11 OS=Arabidopsis thaliana OX=3702 GN=ARAC11 PE=1 SV=2)

HSP 1 Score: 363.2 bits (931), Expect = 1.8e-99
Identity = 176/198 (88.89%), Postives = 190/198 (95.96%), Query Frame = 0


Query: 1   MSVSRFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWD 60
           MS SRF+KCVTVGDGAVGKTC+LISYTSNTFPTDYVPTVFDNFSANVVV+GSTVNLGLWD
Sbjct: 1   MSASRFVKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVNGSTVNLGLWD 60

Query: 61  TAGQEDYNRLRPLSYRGADVFLLAFSLISKASYENVAKKWIPELRHYAPGVPVILVGTKL 120
           TAGQEDYNRLRPLSYRGADVF+LAFSLISKASYENV+KKWIPEL+HYAPGVP++LVGTKL
Sbjct: 61  TAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPGVPIVLVGTKL 120

Query: 121 DLREDKQYLIEHPGVVPITNAQGEELRKLIGAPVYIECSSKTQQNVKAVFDAAIKVVLQP 180
           DLR+DKQ+ I+HPG VPIT AQGEELRK IGAP YIECSSKTQ+NVKAVFDAAI+VVLQP
Sbjct: 121 DLRDDKQFFIDHPGAVPITTAQGEELRKQIGAPTYIECSSKTQENVKAVFDAAIRVVLQP 180

Query: 181 PKRKKRKKRKAQKACSIL 199
           PK+KK KK KAQKACSIL
Sbjct: 181 PKQKK-KKSKAQKACSIL 197

[Close]

BLAST of Tan0012242 vs. NCBI nr
Match: XP_022947397.1 (rac-like GTP-binding protein RAC1 [Cucurbita moschata] >XP_022971108.1 rac-like GTP-binding protein RAC1 [Cucurbita maxima] >XP_023533345.1 rac-like GTP-binding protein RAC1 [Cucurbita pepo subsp. pepo] >KAG6604937.1 Rac-like GTP-binding protein RAC1, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 393.3 bits (1009), Expect = 1.3e-105
Identity = 195/198 (98.48%), Postives = 197/198 (99.49%), Query Frame = 0


Query: 1   MSVSRFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWD 60
           MSVSRFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWD
Sbjct: 1   MSVSRFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWD 60

Query: 61  TAGQEDYNRLRPLSYRGADVFLLAFSLISKASYENVAKKWIPELRHYAPGVPVILVGTKL 120
           TAGQEDYNRLRPLSYRGADVFLLAFSLISKASYENVAKKWIPELRHYAPGVPVILVGTKL
Sbjct: 61  TAGQEDYNRLRPLSYRGADVFLLAFSLISKASYENVAKKWIPELRHYAPGVPVILVGTKL 120

Query: 121 DLREDKQYLIEHPGVVPITNAQGEELRKLIGAPVYIECSSKTQQNVKAVFDAAIKVVLQP 180
           DLREDKQYLIEHPGVVPIT +QGEELRKLIGAPVYIECSSKTQQNVKAVFDAAIKVVLQP
Sbjct: 121 DLREDKQYLIEHPGVVPITTSQGEELRKLIGAPVYIECSSKTQQNVKAVFDAAIKVVLQP 180

Query: 181 PKRKKRKKRKAQKACSIL 199
           PKRKKRKKRKAQK+CSIL
Sbjct: 181 PKRKKRKKRKAQKSCSIL 198

[Close]

BLAST of Tan0012242 vs. NCBI nr
Match: XP_004147042.1 (rac-like GTP-binding protein RAC1 [Cucumis sativus] >XP_008457691.1 PREDICTED: rac-like GTP-binding protein RAC1 [Cucumis melo] >XP_008457692.1 PREDICTED: rac-like GTP-binding protein RAC1 [Cucumis melo] >XP_011649289.1 rac-like GTP-binding protein RAC1 [Cucumis sativus] >KAA0045737.1 rac-like GTP-binding protein RAC1 [Cucumis melo var. makuwa] >KGN61933.1 hypothetical protein Csa_006714 [Cucumis sativus] >TYJ99544.1 rac-like GTP-binding protein RAC1 [Cucumis melo var. makuwa])

HSP 1 Score: 391.3 bits (1004), Expect = 4.8e-105
Identity = 194/198 (97.98%), Postives = 196/198 (98.99%), Query Frame = 0


Query: 1   MSVSRFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWD 60
           MSVSRFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWD
Sbjct: 1   MSVSRFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWD 60

Query: 61  TAGQEDYNRLRPLSYRGADVFLLAFSLISKASYENVAKKWIPELRHYAPGVPVILVGTKL 120
           TAGQEDYNRLRPLSYRGADVFLLAFSLIS+ASYENVAKKWIPELRHYAPGVPVILVGTKL
Sbjct: 61  TAGQEDYNRLRPLSYRGADVFLLAFSLISRASYENVAKKWIPELRHYAPGVPVILVGTKL 120

Query: 121 DLREDKQYLIEHPGVVPITNAQGEELRKLIGAPVYIECSSKTQQNVKAVFDAAIKVVLQP 180
           DLREDKQYL EHPG+VPIT AQGEELRKLIGAPVYIECSSKTQQNVKAVFDAAIKVVLQP
Sbjct: 121 DLREDKQYLNEHPGIVPITTAQGEELRKLIGAPVYIECSSKTQQNVKAVFDAAIKVVLQP 180

Query: 181 PKRKKRKKRKAQKACSIL 199
           PKRKKRKKRKAQKACSIL
Sbjct: 181 PKRKKRKKRKAQKACSIL 198

[Close]

BLAST of Tan0012242 vs. NCBI nr
Match: XP_038902146.1 (rac-like GTP-binding protein RAC1 [Benincasa hispida])

HSP 1 Score: 391.0 bits (1003), Expect = 6.3e-105
Identity = 193/198 (97.47%), Postives = 195/198 (98.48%), Query Frame = 0


Query: 1   MSVSRFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWD 60
           MSVSRFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWD
Sbjct: 1   MSVSRFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWD 60

Query: 61  TAGQEDYNRLRPLSYRGADVFLLAFSLISKASYENVAKKWIPELRHYAPGVPVILVGTKL 120
           TAGQEDYNRLRPLSYRGADVFLLAFSLIS+ASYENVAKKWIPELRHYAPGVPVILVGTKL
Sbjct: 61  TAGQEDYNRLRPLSYRGADVFLLAFSLISRASYENVAKKWIPELRHYAPGVPVILVGTKL 120

Query: 121 DLREDKQYLIEHPGVVPITNAQGEELRKLIGAPVYIECSSKTQQNVKAVFDAAIKVVLQP 180
           DLREDKQYLIEHPG+VPIT AQGEELRKLIGAPVYIECSSKTQQNVKAVFDAAIKVVLQP
Sbjct: 121 DLREDKQYLIEHPGIVPITTAQGEELRKLIGAPVYIECSSKTQQNVKAVFDAAIKVVLQP 180

Query: 181 PKRKKRKKRKAQKACSIL 199
           PKRKKRKKRK QK CSIL
Sbjct: 181 PKRKKRKKRKGQKTCSIL 198

[Close]

BLAST of Tan0012242 vs. NCBI nr
Match: XP_022146132.1 (rac-like GTP-binding protein RAC1 [Momordica charantia])

HSP 1 Score: 388.7 bits (997), Expect = 3.1e-104
Identity = 191/198 (96.46%), Postives = 196/198 (98.99%), Query Frame = 0


Query: 1   MSVSRFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWD 60
           MSVSRFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWD
Sbjct: 1   MSVSRFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWD 60

Query: 61  TAGQEDYNRLRPLSYRGADVFLLAFSLISKASYENVAKKWIPELRHYAPGVPVILVGTKL 120
           TAGQEDYNRLRPLSYRGADVFLLAFSLIS+ASYEN+AKKWIPELRHYAPGVPVILVGTKL
Sbjct: 61  TAGQEDYNRLRPLSYRGADVFLLAFSLISRASYENIAKKWIPELRHYAPGVPVILVGTKL 120

Query: 121 DLREDKQYLIEHPGVVPITNAQGEELRKLIGAPVYIECSSKTQQNVKAVFDAAIKVVLQP 180
           DLREDKQYLIEHPGVVPIT AQGEELRKLIGAP+YIECSSKTQQNVKAVFDAAIKVVLQP
Sbjct: 121 DLREDKQYLIEHPGVVPITTAQGEELRKLIGAPMYIECSSKTQQNVKAVFDAAIKVVLQP 180

Query: 181 PKRKKRKKRKAQKACSIL 199
           PKRKK+KKRK QK+CSIL
Sbjct: 181 PKRKKQKKRKTQKSCSIL 198

[Close]

BLAST of Tan0012242 vs. NCBI nr
Match: XP_002530817.1 (rac-like GTP-binding protein RAC1 [Ricinus communis] >EEF31557.1 rac gtpase, putative [Ricinus communis])

HSP 1 Score: 385.6 bits (989), Expect = 2.6e-103
Identity = 189/198 (95.45%), Postives = 195/198 (98.48%), Query Frame = 0


Query: 1   MSVSRFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWD 60
           MS SRFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWD
Sbjct: 1   MSASRFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWD 60

Query: 61  TAGQEDYNRLRPLSYRGADVFLLAFSLISKASYENVAKKWIPELRHYAPGVPVILVGTKL 120
           TAGQEDYNRLRPLSYRGADVFLLAFSLISKASYENVAKKWIPELRHYAPGVP+ILVGTKL
Sbjct: 61  TAGQEDYNRLRPLSYRGADVFLLAFSLISKASYENVAKKWIPELRHYAPGVPIILVGTKL 120

Query: 121 DLREDKQYLIEHPGVVPITNAQGEELRKLIGAPVYIECSSKTQQNVKAVFDAAIKVVLQP 180
           DLR+DKQ+LI+HPG VPIT AQGEELRKLIGAPVYIECSSKTQQNVKAVFDAAIKVVLQP
Sbjct: 121 DLRDDKQFLIDHPGAVPITTAQGEELRKLIGAPVYIECSSKTQQNVKAVFDAAIKVVLQP 180

Query: 181 PKRKKRKKRKAQKACSIL 199
           PK+KKRKKR+AQKACSIL
Sbjct: 181 PKQKKRKKRRAQKACSIL 198

[Close]

BLAST of Tan0012242 vs. ExPASy TrEMBL
Match: A0A6J1I5W1 (rac-like GTP-binding protein RAC1 OS=Cucurbita maxima OX=3661 GN=LOC111469876 PE=3 SV=1)

HSP 1 Score: 393.3 bits (1009), Expect = 6.1e-106
Identity = 195/198 (98.48%), Postives = 197/198 (99.49%), Query Frame = 0


Query: 1   MSVSRFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWD 60
           MSVSRFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWD
Sbjct: 1   MSVSRFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWD 60

Query: 61  TAGQEDYNRLRPLSYRGADVFLLAFSLISKASYENVAKKWIPELRHYAPGVPVILVGTKL 120
           TAGQEDYNRLRPLSYRGADVFLLAFSLISKASYENVAKKWIPELRHYAPGVPVILVGTKL
Sbjct: 61  TAGQEDYNRLRPLSYRGADVFLLAFSLISKASYENVAKKWIPELRHYAPGVPVILVGTKL 120

Query: 121 DLREDKQYLIEHPGVVPITNAQGEELRKLIGAPVYIECSSKTQQNVKAVFDAAIKVVLQP 180
           DLREDKQYLIEHPGVVPIT +QGEELRKLIGAPVYIECSSKTQQNVKAVFDAAIKVVLQP
Sbjct: 121 DLREDKQYLIEHPGVVPITTSQGEELRKLIGAPVYIECSSKTQQNVKAVFDAAIKVVLQP 180

Query: 181 PKRKKRKKRKAQKACSIL 199
           PKRKKRKKRKAQK+CSIL
Sbjct: 181 PKRKKRKKRKAQKSCSIL 198

[Close]

BLAST of Tan0012242 vs. ExPASy TrEMBL
Match: A0A6J1G6C3 (rac-like GTP-binding protein RAC1 OS=Cucurbita moschata OX=3662 GN=LOC111451274 PE=3 SV=1)

HSP 1 Score: 393.3 bits (1009), Expect = 6.1e-106
Identity = 195/198 (98.48%), Postives = 197/198 (99.49%), Query Frame = 0


Query: 1   MSVSRFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWD 60
           MSVSRFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWD
Sbjct: 1   MSVSRFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWD 60

Query: 61  TAGQEDYNRLRPLSYRGADVFLLAFSLISKASYENVAKKWIPELRHYAPGVPVILVGTKL 120
           TAGQEDYNRLRPLSYRGADVFLLAFSLISKASYENVAKKWIPELRHYAPGVPVILVGTKL
Sbjct: 61  TAGQEDYNRLRPLSYRGADVFLLAFSLISKASYENVAKKWIPELRHYAPGVPVILVGTKL 120

Query: 121 DLREDKQYLIEHPGVVPITNAQGEELRKLIGAPVYIECSSKTQQNVKAVFDAAIKVVLQP 180
           DLREDKQYLIEHPGVVPIT +QGEELRKLIGAPVYIECSSKTQQNVKAVFDAAIKVVLQP
Sbjct: 121 DLREDKQYLIEHPGVVPITTSQGEELRKLIGAPVYIECSSKTQQNVKAVFDAAIKVVLQP 180

Query: 181 PKRKKRKKRKAQKACSIL 199
           PKRKKRKKRKAQK+CSIL
Sbjct: 181 PKRKKRKKRKAQKSCSIL 198

[Close]

BLAST of Tan0012242 vs. ExPASy TrEMBL
Match: A0A1S3C7E5 (rac-like GTP-binding protein RAC1 OS=Cucumis melo OX=3656 GN=LOC103497331 PE=3 SV=1)

HSP 1 Score: 391.3 bits (1004), Expect = 2.3e-105
Identity = 194/198 (97.98%), Postives = 196/198 (98.99%), Query Frame = 0


Query: 1   MSVSRFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWD 60
           MSVSRFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWD
Sbjct: 1   MSVSRFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWD 60

Query: 61  TAGQEDYNRLRPLSYRGADVFLLAFSLISKASYENVAKKWIPELRHYAPGVPVILVGTKL 120
           TAGQEDYNRLRPLSYRGADVFLLAFSLIS+ASYENVAKKWIPELRHYAPGVPVILVGTKL
Sbjct: 61  TAGQEDYNRLRPLSYRGADVFLLAFSLISRASYENVAKKWIPELRHYAPGVPVILVGTKL 120

Query: 121 DLREDKQYLIEHPGVVPITNAQGEELRKLIGAPVYIECSSKTQQNVKAVFDAAIKVVLQP 180
           DLREDKQYL EHPG+VPIT AQGEELRKLIGAPVYIECSSKTQQNVKAVFDAAIKVVLQP
Sbjct: 121 DLREDKQYLNEHPGIVPITTAQGEELRKLIGAPVYIECSSKTQQNVKAVFDAAIKVVLQP 180

Query: 181 PKRKKRKKRKAQKACSIL 199
           PKRKKRKKRKAQKACSIL
Sbjct: 181 PKRKKRKKRKAQKACSIL 198

[Close]

BLAST of Tan0012242 vs. ExPASy TrEMBL
Match: A0A5D3BKK0 (Rac-like GTP-binding protein RAC1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold123G001120 PE=3 SV=1)

HSP 1 Score: 391.3 bits (1004), Expect = 2.3e-105
Identity = 194/198 (97.98%), Postives = 196/198 (98.99%), Query Frame = 0


Query: 1   MSVSRFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWD 60
           MSVSRFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWD
Sbjct: 1   MSVSRFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWD 60

Query: 61  TAGQEDYNRLRPLSYRGADVFLLAFSLISKASYENVAKKWIPELRHYAPGVPVILVGTKL 120
           TAGQEDYNRLRPLSYRGADVFLLAFSLIS+ASYENVAKKWIPELRHYAPGVPVILVGTKL
Sbjct: 61  TAGQEDYNRLRPLSYRGADVFLLAFSLISRASYENVAKKWIPELRHYAPGVPVILVGTKL 120

Query: 121 DLREDKQYLIEHPGVVPITNAQGEELRKLIGAPVYIECSSKTQQNVKAVFDAAIKVVLQP 180
           DLREDKQYL EHPG+VPIT AQGEELRKLIGAPVYIECSSKTQQNVKAVFDAAIKVVLQP
Sbjct: 121 DLREDKQYLNEHPGIVPITTAQGEELRKLIGAPVYIECSSKTQQNVKAVFDAAIKVVLQP 180

Query: 181 PKRKKRKKRKAQKACSIL 199
           PKRKKRKKRKAQKACSIL
Sbjct: 181 PKRKKRKKRKAQKACSIL 198

[Close]

BLAST of Tan0012242 vs. ExPASy TrEMBL
Match: A0A0A0LJG3 (Rac-type small GTP-binding protein OS=Cucumis sativus OX=3659 GN=Csa_2G270750 PE=3 SV=1)

HSP 1 Score: 391.3 bits (1004), Expect = 2.3e-105
Identity = 194/198 (97.98%), Postives = 196/198 (98.99%), Query Frame = 0


Query: 1   MSVSRFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWD 60
           MSVSRFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWD
Sbjct: 1   MSVSRFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWD 60

Query: 61  TAGQEDYNRLRPLSYRGADVFLLAFSLISKASYENVAKKWIPELRHYAPGVPVILVGTKL 120
           TAGQEDYNRLRPLSYRGADVFLLAFSLIS+ASYENVAKKWIPELRHYAPGVPVILVGTKL
Sbjct: 61  TAGQEDYNRLRPLSYRGADVFLLAFSLISRASYENVAKKWIPELRHYAPGVPVILVGTKL 120

Query: 121 DLREDKQYLIEHPGVVPITNAQGEELRKLIGAPVYIECSSKTQQNVKAVFDAAIKVVLQP 180
           DLREDKQYL EHPG+VPIT AQGEELRKLIGAPVYIECSSKTQQNVKAVFDAAIKVVLQP
Sbjct: 121 DLREDKQYLNEHPGIVPITTAQGEELRKLIGAPVYIECSSKTQQNVKAVFDAAIKVVLQP 180

Query: 181 PKRKKRKKRKAQKACSIL 199
           PKRKKRKKRKAQKACSIL
Sbjct: 181 PKRKKRKKRKAQKACSIL 198

[Close]

BLAST of Tan0012242 vs. TAIR 10
Match: AT4G35020.1 (RAC-like 3 )

HSP 1 Score: 369.8 bits (948), Expect = 1.4e-102
Identity = 175/198 (88.38%), Postives = 190/198 (95.96%), Query Frame = 0


Query: 1   MSVSRFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWD 60
           MS SRFIKCVTVGDGAVGKTC+LISYTSNTFPTDYVPTVFDNFSANV+VDG+T+NLGLWD
Sbjct: 1   MSASRFIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVIVDGNTINLGLWD 60

Query: 61  TAGQEDYNRLRPLSYRGADVFLLAFSLISKASYENVAKKWIPELRHYAPGVPVILVGTKL 120
           TAGQEDYNRLRPLSYRGADVFLLAFSL+SKASYENV+KKW+PELRHYAPGVP+ILVGTKL
Sbjct: 61  TAGQEDYNRLRPLSYRGADVFLLAFSLVSKASYENVSKKWVPELRHYAPGVPIILVGTKL 120

Query: 121 DLREDKQYLIEHPGVVPITNAQGEELRKLIGAPVYIECSSKTQQNVKAVFDAAIKVVLQP 180
           DLR+DKQ+  EHPG VPI+ AQGEEL+KLIGAP YIECS+KTQQNVKAVFDAAIKVVLQP
Sbjct: 121 DLRDDKQFFAEHPGAVPISTAQGEELKKLIGAPAYIECSAKTQQNVKAVFDAAIKVVLQP 180

Query: 181 PKRKKRKKRKAQKACSIL 199
           PK KK+KKRK+QK CSIL
Sbjct: 181 PKNKKKKKRKSQKGCSIL 198

[Close]

BLAST of Tan0012242 vs. TAIR 10
Match: AT4G35020.2 (RAC-like 3 )

HSP 1 Score: 369.8 bits (948), Expect = 1.4e-102
Identity = 175/198 (88.38%), Postives = 190/198 (95.96%), Query Frame = 0


Query: 1   MSVSRFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWD 60
           MS SRFIKCVTVGDGAVGKTC+LISYTSNTFPTDYVPTVFDNFSANV+VDG+T+NLGLWD
Sbjct: 1   MSASRFIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVIVDGNTINLGLWD 60

Query: 61  TAGQEDYNRLRPLSYRGADVFLLAFSLISKASYENVAKKWIPELRHYAPGVPVILVGTKL 120
           TAGQEDYNRLRPLSYRGADVFLLAFSL+SKASYENV+KKW+PELRHYAPGVP+ILVGTKL
Sbjct: 61  TAGQEDYNRLRPLSYRGADVFLLAFSLVSKASYENVSKKWVPELRHYAPGVPIILVGTKL 120

Query: 121 DLREDKQYLIEHPGVVPITNAQGEELRKLIGAPVYIECSSKTQQNVKAVFDAAIKVVLQP 180
           DLR+DKQ+  EHPG VPI+ AQGEEL+KLIGAP YIECS+KTQQNVKAVFDAAIKVVLQP
Sbjct: 121 DLRDDKQFFAEHPGAVPISTAQGEELKKLIGAPAYIECSAKTQQNVKAVFDAAIKVVLQP 180

Query: 181 PKRKKRKKRKAQKACSIL 199
           PK KK+KKRK+QK CSIL
Sbjct: 181 PKNKKKKKRKSQKGCSIL 198

[Close]

BLAST of Tan0012242 vs. TAIR 10
Match: AT4G35020.3 (RAC-like 3 )

HSP 1 Score: 369.8 bits (948), Expect = 1.4e-102
Identity = 175/198 (88.38%), Postives = 190/198 (95.96%), Query Frame = 0


Query: 1   MSVSRFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWD 60
           MS SRFIKCVTVGDGAVGKTC+LISYTSNTFPTDYVPTVFDNFSANV+VDG+T+NLGLWD
Sbjct: 1   MSASRFIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVIVDGNTINLGLWD 60

Query: 61  TAGQEDYNRLRPLSYRGADVFLLAFSLISKASYENVAKKWIPELRHYAPGVPVILVGTKL 120
           TAGQEDYNRLRPLSYRGADVFLLAFSL+SKASYENV+KKW+PELRHYAPGVP+ILVGTKL
Sbjct: 61  TAGQEDYNRLRPLSYRGADVFLLAFSLVSKASYENVSKKWVPELRHYAPGVPIILVGTKL 120

Query: 121 DLREDKQYLIEHPGVVPITNAQGEELRKLIGAPVYIECSSKTQQNVKAVFDAAIKVVLQP 180
           DLR+DKQ+  EHPG VPI+ AQGEEL+KLIGAP YIECS+KTQQNVKAVFDAAIKVVLQP
Sbjct: 121 DLRDDKQFFAEHPGAVPISTAQGEELKKLIGAPAYIECSAKTQQNVKAVFDAAIKVVLQP 180

Query: 181 PKRKKRKKRKAQKACSIL 199
           PK KK+KKRK+QK CSIL
Sbjct: 181 PKNKKKKKRKSQKGCSIL 198

[Close]

BLAST of Tan0012242 vs. TAIR 10
Match: AT3G51300.1 (RHO-related protein from plants 1 )

HSP 1 Score: 363.2 bits (931), Expect = 1.3e-100
Identity = 176/198 (88.89%), Postives = 190/198 (95.96%), Query Frame = 0


Query: 1   MSVSRFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWD 60
           MS SRF+KCVTVGDGAVGKTC+LISYTSNTFPTDYVPTVFDNFSANVVV+GSTVNLGLWD
Sbjct: 1   MSASRFVKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVNGSTVNLGLWD 60

Query: 61  TAGQEDYNRLRPLSYRGADVFLLAFSLISKASYENVAKKWIPELRHYAPGVPVILVGTKL 120
           TAGQEDYNRLRPLSYRGADVF+LAFSLISKASYENV+KKWIPEL+HYAPGVP++LVGTKL
Sbjct: 61  TAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPGVPIVLVGTKL 120

Query: 121 DLREDKQYLIEHPGVVPITNAQGEELRKLIGAPVYIECSSKTQQNVKAVFDAAIKVVLQP 180
           DLR+DKQ+ I+HPG VPIT AQGEELRK IGAP YIECSSKTQ+NVKAVFDAAI+VVLQP
Sbjct: 121 DLRDDKQFFIDHPGAVPITTAQGEELRKQIGAPTYIECSSKTQENVKAVFDAAIRVVLQP 180

Query: 181 PKRKKRKKRKAQKACSIL 199
           PK+KK KK KAQKACSIL
Sbjct: 181 PKQKK-KKSKAQKACSIL 197

[Close]

BLAST of Tan0012242 vs. TAIR 10
Match: AT2G17800.1 (Arabidopsis RAC-like 1 )

HSP 1 Score: 362.1 bits (928), Expect = 2.9e-100
Identity = 175/198 (88.38%), Postives = 190/198 (95.96%), Query Frame = 0


Query: 1   MSVSRFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWD 60
           MS SRFIKCVTVGDGAVGKTC+LISYTSNTFPTDYVPTVFDNFSANVVV+G+TVNLGLWD
Sbjct: 1   MSASRFIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVNGATVNLGLWD 60

Query: 61  TAGQEDYNRLRPLSYRGADVFLLAFSLISKASYENVAKKWIPELRHYAPGVPVILVGTKL 120
           TAGQEDYNRLRPLSYRGADVF+LAFSLISKASYENV+KKWIPEL+HYAPGVP++LVGTKL
Sbjct: 61  TAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPGVPIVLVGTKL 120

Query: 121 DLREDKQYLIEHPGVVPITNAQGEELRKLIGAPVYIECSSKTQQNVKAVFDAAIKVVLQP 180
           DLR+DKQ+ I+HPG VPIT AQGEEL+KLIGAP YIECSSKTQ+NVK VFDAAI+VVLQP
Sbjct: 121 DLRDDKQFFIDHPGAVPITTAQGEELKKLIGAPAYIECSSKTQENVKGVFDAAIRVVLQP 180

Query: 181 PKRKKRKKRKAQKACSIL 199
           PK+KK KK KAQKACSIL
Sbjct: 181 PKQKK-KKSKAQKACSIL 197

The following BLAST results are available for this feature:

BLAST of Tan0012242 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O04369	2.0e-101	91.41	Rac-like GTP-binding protein RAC1 OS=Lotus japonicus OX=34305 GN=RAC1 PE=2 SV=1	[more]
Q38912	2.0e-101	88.38	Rac-like GTP-binding protein ARAC3 OS=Arabidopsis thaliana OX=3702 GN=ARAC3 PE=1...	[more]
Q6EP31	1.7e-100	90.40	Rac-like GTP-binding protein 5 OS=Oryza sativa subsp. japonica OX=39947 GN=RAC5 ...	[more]
Q39435	2.2e-100	90.40	Rac-like GTP-binding protein RHO1 OS=Beta vulgaris OX=161934 GN=RHO1 PE=2 SV=1	[more]
P92978	1.8e-99	88.89	Rac-like GTP-binding protein ARAC11 OS=Arabidopsis thaliana OX=3702 GN=ARAC11 PE...	[more]

BLAST of Tan0012242 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022947397.1	1.3e-105	98.48	rac-like GTP-binding protein RAC1 [Cucurbita moschata] >XP_022971108.1 rac-like ...	[more]
XP_004147042.1	4.8e-105	97.98	rac-like GTP-binding protein RAC1 [Cucumis sativus] >XP_008457691.1 PREDICTED: r...	[more]
XP_038902146.1	6.3e-105	97.47	rac-like GTP-binding protein RAC1 [Benincasa hispida]	[more]
XP_022146132.1	3.1e-104	96.46	rac-like GTP-binding protein RAC1 [Momordica charantia]	[more]
XP_002530817.1	2.6e-103	95.45	rac-like GTP-binding protein RAC1 [Ricinus communis] >EEF31557.1 rac gtpase, put...	[more]

BLAST of Tan0012242 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1I5W1	6.1e-106	98.48	rac-like GTP-binding protein RAC1 OS=Cucurbita maxima OX=3661 GN=LOC111469876 PE...	[more]
A0A6J1G6C3	6.1e-106	98.48	rac-like GTP-binding protein RAC1 OS=Cucurbita moschata OX=3662 GN=LOC111451274 ...	[more]
A0A1S3C7E5	2.3e-105	97.98	rac-like GTP-binding protein RAC1 OS=Cucumis melo OX=3656 GN=LOC103497331 PE=3 S...	[more]
A0A5D3BKK0	2.3e-105	97.98	Rac-like GTP-binding protein RAC1 OS=Cucumis melo var. makuwa OX=1194695 GN=E567...	[more]
A0A0A0LJG3	2.3e-105	97.98	Rac-type small GTP-binding protein OS=Cucumis sativus OX=3659 GN=Csa_2G270750 PE...	[more]

BLAST of Tan0012242 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G35020.1	1.4e-102	88.38	RAC-like 3	[more]
AT4G35020.2	1.4e-102	88.38	RAC-like 3	[more]
AT4G35020.3	1.4e-102	88.38	RAC-like 3	[more]
AT3G51300.1	1.3e-100	88.89	RHO-related protein from plants 1	[more]
AT2G17800.1	2.9e-100	88.38	Arabidopsis RAC-like 1	[more]

InterPro

Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PRINTS	PR00449	RASTRNSFRMNG	coord: 30..46 score: 32.14 coord: 47..69 score: 49.26 coord: 7..28 score: 44.74 coord: 155..177 score: 34.52 coord: 109..122 score: 50.29
None	No IPR available	SMART	SM00173	ras_sub_4	coord: 4..180 e-value: 1.5E-19 score: 81.0
None	No IPR available	SMART	SM00175	rab_sub_5	coord: 7..180 e-value: 4.7E-26 score: 102.6
None	No IPR available	PANTHER	PTHR24072:SF336	RAC-LIKE GTP-BINDING PROTEIN 5	coord: 1..198
None	No IPR available	PROSITE	PS51419	RAB	coord: 2..198 score: 19.88633
None	No IPR available	PROSITE	PS51420	RHO	coord: 1..177 score: 25.009665
None	No IPR available	CDD	cd04133	Rop_like	coord: 6..178 e-value: 4.36859E-136 score: 376.109
IPR001806	Small GTPase	SMART	SM00174	rho_sub_3	coord: 9..180 e-value: 8.6E-114 score: 394.0
IPR001806	Small GTPase	PFAM	PF00071	Ras	coord: 8..178 e-value: 2.8E-50 score: 170.1
IPR001806	Small GTPase	PROSITE	PS51421	RAS	coord: 2..198 score: 16.534624
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	3.40.50.300		coord: 2..198 e-value: 1.5E-71 score: 241.8
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 6..178
IPR005225	Small GTP-binding protein domain	TIGRFAM	TIGR00231	TIGR00231	coord: 7..171 e-value: 3.9E-34 score: 115.7
IPR003578	Small GTPase Rho	PANTHER	PTHR24072	RHO FAMILY GTPASE	coord: 1..198

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Tan0012242.1	Tan0012242.1	mRNA
Tan0012242.2	Tan0012242.2	mRNA
Tan0012242.3	Tan0012242.3	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0007015	actin filament organization
biological_process	GO:0030865	cortical cytoskeleton organization
biological_process	GO:0007163	establishment or maintenance of cell polarity
biological_process	GO:0032956	regulation of actin cytoskeleton organization
biological_process	GO:0008360	regulation of cell shape
biological_process	GO:0007264	small GTPase mediated signal transduction
cellular_component	GO:0005938	cell cortex
cellular_component	GO:0042995	cell projection
cellular_component	GO:0031410	cytoplasmic vesicle
cellular_component	GO:0005856	cytoskeleton
cellular_component	GO:0005634	nucleus
cellular_component	GO:0005886	plasma membrane
molecular_function	GO:0003924	GTPase activity
molecular_function	GO:0005525	GTP binding
molecular_function	GO:0019901	protein kinase binding
molecular_function	GO:0004767	sphingomyelin phosphodiesterase activity