Tan0002972.3 (mRNA) Snake gourd v1

Overview


Name	Tan0002972.3
Type	mRNA
Organism	Trichosanthes anguina (Snake gourd v1)
Description	Protein yippee-like
Location	LG11: 2125133 .. 2128463 (-)
Sequence length	1076
RNA-Seq Expression	Tan0002972.3
Synteny	Tan0002972.3

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GAGAGATAAGAGAAGATACGAATCCTTTGTGCCACTGCTGACTTCGCTGGTTCAACAGAACCTCAAAACGACGATGCCTTTAGCCCGCAAATTTCTCAACAGTTCACAGTCAGCGCCGGCTGCCGCCGACAGCAGTCAGCTCCATGGACTTCGCTTCATAAAATGGTAGAAATGGCGGCGGGCTTAGCAGCGATCGCTGGAACTAGCTGTTTCTCTCGAAGAATTGGGAGATGAAATGGAATGAAGTTTATGAGGGAACCCAAAAAGATATATGAGAAAATAATAAAAAAAATTTCCAAGTGGAAAAAAGGAAGTCGAAACGAAAAGTTGATTGCATTAGCATCCACGTCGTATCGGGTTTAAAGGGACCGTCTTTACAGAGAAAGTGGTATTTATAATTGGCGAGACGTGACCAAATTTCTCTGTCCACATTTCTTGTAACTTGCGACTACCCACAAGAAGATAGGTAAAGTTCCATTTTGATTCTCTTCCCCTCCCTTCCTTTCCCTCTTTTTCTTCAATTTATTCCTTGCTTCTCACTTGATTCTTCCTCTTCTTCTTCTATTTTTTGTTCTGATTGCTTGAGCAACTCAATTTCTGATAACCCATTTTTCCCCTTTCGATTTTTTATGAGATTTCAAAGTCATGGGGAGGTTGTTCGTGGTGAGCCTCGAAGGAAGGATCTATAGCTGCAAGCACTGCCGAACCCATCTTGCTCTTTATGAGGACATCGTTTCCAAGGTTTTGATACACAATAACTGTTCATTTCTGATTTCTGATCTGATTTTTTTCTATGGATTTTTCATTAATTTGCCTATACTCTTTTCTAATGCGATGACAATATTGATTGACCCTTTAATATGGTAAGAAATATGTGGTGTTTGACTGTTTAAATTGTCCTTGTTATTAGAAGGATCAGCCCCCAACCCCAAGCTTCTTCTTGGGGCTTTTCTTAACTTGATGATCTTAATTTTAATTAGAAATTTGATTGAGTATATATATTAGCTCTACCCTTTGAATATTCATTTTCAGACTAAAAGATACTAGGAATGTCATTGGAGAAAAGTGTTCTGACTTAATTTTTTCCTGTGTTTCTATTATTCAGTCTTTCCAATCCAGACATGGGAAAGCTTACCTCTTCAATAAAGTGTAAGTTTTCCTGGATGATAGTAGTAATTTGGCCAAATGATTCCATTAAAGATCCCAAATCTCCTTTGTTTCTTTCCAATGACAAACTAAGAGAACGGGGATGAAGGTCAAATCCGAACTTGTTTAATCTCCCTTTTTCTTTCTTTTTATCTAACGGCTCCTTTTAAGTTTTAGTTTTCTTCTTGTCATTTTTATTCATAACTTCTGTATATGCTGCCGCTCTTCCTTGGCTACTGTTTTTGGTTTTTGTATAATTCAAGTGAATGTGTTCGTCATTTGAAGTGAAGCTTCATCATCCTCTATATTTGATAAGATTGAATGAAGTTCAAACTTATTTATTCATTTTCTCTTTAAGAATTGAGTCCAATCTTGTTTTTTTTTTTAACAGAGTGAATGTTACTGTTGGAGTGAAAGAAACGAGAATGATGATGACGGGGATGCATACTGTTGCTGATATCTTCTGTGTTGGCTGTGGATCAATTGTGGGATGGACATATGTAAGATATCATAAATCAGAAAGGCTTAGAAGTTCTATGCTGTTATGTTCTTATTCATGGTCTTATTATACCTTCTTTTGATGATCTTTGATCGTCCACTTCAGGAAACTGCCTTTGAAAAGAACCAGAAGTACAAAGAAGGGAAGTCTGTACTGGAGCGGTAAGTAAATGTACATGACGAATAATTTTATATCAGATGAGGCTTAATATTTTACAGTAAGTTGCTTTGAATCATTACTTTTAAGGCTTGAAGCTGCTCTAAAATGTCCATTTTTTTTTTGGAAAGACCATCTTTCTTGATCATAGTTAAGAAAATGGTCTTATTGGGTTCTTTGGATCATCTCGTCATTCATCATTTGGAAAAGAAATATTACATGACAGAGCATGAGACTAGTGTAATAGCTCGTAGAATATTTATTTTACAAACATGGTAGACGATAGATTTGCCTTCTTGTTATGTGTCTATCCCTTTTAATTGTGCAATAATCTAAAATATACAAATATACCTACCATATCAGTGAAATTGGCTACATATAAGTTATCCAATCATCTCCTAACTTATCATATCAAATATCACATCATCAACAAAATTGTTCAGGATGAACTGATTTAAGATTATTTAGAACAACTTTCAAAATTTTAGAGGTTAAATTATCGTAGTTTTAGCTCCAAGGACCAGTTAAAATCATATCTTGAACTATAGAGACTAATGCCTTTTTTCCTCATCTTTTTTTTTTTTTTCATTAGAGCACTTCAAATTTTCATTTTTAACGTTATCTAGTTTCAACCATACAGTAATTTCATCGCCACCCCCACCCAGGTCGTTTATTGTGGTTGGCTTGTTTTTGTTTTTGTGCTATTTTATGGGGTCCTTTAGCGAGAAAGAAGCAATAAAATTTTTAGGGGGATTGAAGAGACCTTAGGGCGAGGTTTGATCCTTTGTTAGATTTCATGTGTCTTTCTAGGTCTTATTTTGCTTGATTGGGGCCCCTTTTCAGTTTAGTTGGACTTCTCTCGTGGGGTGTTTTTTTGTATTATCTCTCGTATTCTTTCATTCGATCTCAACAAAAGTGTGGTTTATAATAATTTCATATTGCACAAGATCTCATCTTCGTGTATAAACATCTTGAGAACATTCTATTATCACATTGAATATTTATATATCTCAGAGGTTGCAGAGCGAGTAGTGGTAAAGTTTTATAGAGTAATAGACCAGAAAGACTTGTGCAATGGAGAATTTGTCCAAGATAACTTATAAGGGGCAGTGAAGTAGTACAAGTTAGTTGTATTAGGTGGAAATGGGAATTAGGGTTAAGCATTTGTTGTGTTGATGAACAGATTCAAGGTGTCAGGCCCTGGTGGAACCAGTTATTGGGTCAGTCATGCTCATAGTCATGAAGCAGCTCATGTTGGAGGAAGTGATGCAGATGAAGCTTGAAGGTGATGATGATAATGCTCACTCATAATTAATTCCAAACTGTACATTCTGCTCACTCACAATGTTCATATTGTTCTTCATCTGCAATTCCTCATTTCAGCAGCTAACCTGCTTGCTGCTTGTAACCAAACTGGACATTTGATTCTCATTCTTCTGCAACTTAATATTACTCAACTTTGCAATATGATGAAGTGTTTTTCAACAAATTTGTGTCCTTCTTTTGGTTAAATATATTAGTTTGCCCCAA

mRNA sequence

GAGAGATAAGAGAAGATACGAATCCTTTGTGCCACTGCTGACTTCGCTGGTTCAACAGAACCTCAAAACGACGATGCCTTTAGCCCGCAAATTTCTCAACAGTTCACAGTCAGCGCCGGCTGCCGCCGACAGCAGTCAGCTCCATGGACTTCGCTTCATAAAATGGTAGAAATGGCGGCGGGCTTAGCAGCGATCGCTGGAACTAGCTGTTTCTCTCGAAGAATTGGGAGATGAAATGGAATGAAGTTTATGAGGGAACCCAAAAAGATATATGAGAAAATAATAAAAAAAATTTCCAAGTGGAAAAAAGGAAGTCGAAACGAAAAGTTGATTGCATTAGCATCCACGTCGTATCGGGTTTAAAGGGACCGTCTTTACAGAGAAAGTGGTATTTATAATTGGCGAGACGTGACCAAATTTCTCTGTCCACATTTCTTGTAACTTGCGACTACCCACAAGAAGATAGTCATGGGGAGGTTGTTCGTGGTGAGCCTCGAAGGAAGGATCTATAGCTGCAAGCACTGCCGAACCCATCTTGCTCTTTATGAGGACATCGTTTCCAAGAGTGAATGTTACTGTTGGAGTGAAAGAAACGAGAATGATGATGACGGGGATGCATACTGTTGCTGATATCTTCTGTGTTGGCTGTGGATCAATTGTGGGATGGACATATGAAACTGCCTTTGAAAAGAACCAGAAGTACAAAGAAGGGAAGTCTGTACTGGAGCGATTCAAGGTGTCAGGCCCTGGTGGAACCAGTTATTGGGTCAGTCATGCTCATAGTCATGAAGCAGCTCATGTTGGAGGAAGTGATGCAGATGAAGCTTGAAGGTGATGATGATAATGCTCACTCATAATTAATTCCAAACTGTACATTCTGCTCACTCACAATGTTCATATTGTTCTTCATCTGCAATTCCTCATTTCAGCAGCTAACCTGCTTGCTGCTTGTAACCAAACTGGACATTTGATTCTCATTCTTCTGCAACTTAATATTACTCAACTTTGCAATATGATGAAGTGTTTTTCAACAAATTTGTGTCCTTCTTTTGGTTAAATATATTAGTTTGCCCCAA

Coding sequence (CDS)

ATGAGGACATCGTTTCCAAGAGTGAATGTTACTGTTGGAGTGAAAGAAACGAGAATGATGATGACGGGGATGCATACTGTTGCTGATATCTTCTGTGTTGGCTGTGGATCAATTGTGGGATGGACATATGAAACTGCCTTTGAAAAGAACCAGAAGTACAAAGAAGGGAAGTCTGTACTGGAGCGATTCAAGGTGTCAGGCCCTGGTGGAACCAGTTATTGGGTCAGTCATGCTCATAGTCATGAAGCAGCTCATGTTGGAGGAAGTGATGCAGATGAAGCTTGA

Protein sequence

MRTSFPRVNVTVGVKETRMMMTGMHTVADIFCVGCGSIVGWTYETAFEKNQKYKEGKSVLERFKVSGPGGTSYWVSHAHSHEAAHVGGSDADEA

Homology

[Close]

BLAST of Tan0002972.3 vs. ExPASy Swiss-Prot
Match: P59234 (Protein yippee-like OS=Solanum tuberosum OX=4113 PE=2 SV=1)

HSP 1 Score: 127.1 bits (318), Expect = 1.0e-28
Identity = 63/86 (73.26%), Postives = 68/86 (79.07%), Query Frame = 0


Query: 8   VNVTVGVKETRMMMTGMHTVADIFCVGCGSIVGWTYETAFEKNQKYKEGKSVLERFKVSG 67
           VNVT G  E RMMMTGMHTVADIFCV CGSIVGW YETA EK+QKYKEGKSVLERFK++G
Sbjct: 48  VNVTSGEIENRMMMTGMHTVADIFCVCCGSIVGWKYETAHEKSQKYKEGKSVLERFKITG 107

Query: 68  PGGTSYWVSHAHSHEAAHVGGSDADE 94
           P G+ YW SH       HV GSDAD+
Sbjct: 108 PDGSHYWASH-----DTHVAGSDADD 128

[Close]

BLAST of Tan0002972.3 vs. ExPASy Swiss-Prot
Match: Q9C777 (Protein yippee-like At3g11230 OS=Arabidopsis thaliana OX=3702 GN=At3g11230 PE=2 SV=1)

HSP 1 Score: 117.1 bits (292), Expect = 1.1e-25
Identity = 58/87 (66.67%), Postives = 64/87 (73.56%), Query Frame = 0


Query: 8   VNVTVGVKETRMMMTGMHTVADIFCVGCGSIVGWTYETAFEKNQKYKEGKSVLERFKVSG 67
           VNV  G KE RMMMTGMHTV DI+CV CGS VGW YE AFEKNQKYKEGKSVLER+KV G
Sbjct: 48  VNVYAGKKEDRMMMTGMHTVVDIYCVKCGSYVGWKYEFAFEKNQKYKEGKSVLERYKVWG 107

Query: 68  PGGTSYWVSHAHSHEAAHVGGSDADEA 95
           P G +YWV+     +    G SD D+A
Sbjct: 108 PDGNNYWVA-----QEVEAGDSDTDDA 129

[Close]

BLAST of Tan0002972.3 vs. ExPASy Swiss-Prot
Match: Q9SR97 (Protein yippee-like At3g08990 OS=Arabidopsis thaliana OX=3702 GN=At3g08990 PE=2 SV=2)

HSP 1 Score: 104.4 bits (259), Expect = 7.3e-22
Identity = 48/66 (72.73%), Postives = 55/66 (83.33%), Query Frame = 0


Query: 8   VNVTVGVKETRMMMTGMHTVADIFCVGCGSIVGWTYETAFEKNQKYKEGKSVLERFKVSG 67
           VNVTVG KE R+M+TG HTVADIFCV CGS+VGW YE A++K+QKYKEGK +LERFKV G
Sbjct: 48  VNVTVGEKEHRVMITGWHTVADIFCVSCGSLVGWKYEIAYDKSQKYKEGKFILERFKVLG 107

Query: 68  PGGTSY 74
           P G  Y
Sbjct: 108 PYGGGY 113

[Close]

BLAST of Tan0002972.3 vs. ExPASy Swiss-Prot
Match: Q9LY56 (Protein yippee-like At3g55890 OS=Arabidopsis thaliana OX=3702 GN=At3g55890 PE=2 SV=1)

HSP 1 Score: 100.5 bits (249), Expect = 1.1e-20
Identity = 48/69 (69.57%), Postives = 56/69 (81.16%), Query Frame = 0


Query: 8   VNVTVGVKETRMMMTGMHTVADIFCVGCGSIVGWTYETAFEKNQKYKEGKSVLERFKVSG 67
           VNV+VG KE RMM+TG+H V DIFCVGCGS VGW YE A EK+QKYKEGKSVLE +K+SG
Sbjct: 48  VNVSVGEKEDRMMITGLHNVVDIFCVGCGSNVGWKYEFAHEKSQKYKEGKSVLELYKISG 107

Query: 68  PGGTSYWVS 77
           P  ++  VS
Sbjct: 108 PHDSNDLVS 116

[Close]

BLAST of Tan0002972.3 vs. ExPASy Swiss-Prot
Match: Q9FN32 (Protein yippee-like At5g53940 OS=Arabidopsis thaliana OX=3702 GN=At5g53940 PE=2 SV=1)

HSP 1 Score: 82.0 bits (201), Expect = 3.9e-15
Identity = 37/58 (63.79%), Postives = 46/58 (79.31%), Query Frame = 0


Query: 8   VNVTVGVKETRMMMTGMHTVADIFCVGCGSIVGWTYETAFEKNQKYKEGKSVLERFKV 66
           VN+++G  E R+M++GMHTVADIFC  CG  VGW YE+A EK QKYKEGK VLER ++
Sbjct: 48  VNISMGPLEERLMLSGMHTVADIFCCCCGQNVGWKYESAHEKAQKYKEGKFVLERGRI 105

[Close]

BLAST of Tan0002972.3 vs. NCBI nr
Match: KAG6578446.1 (putative zinc metalloprotease EGY2, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 181.8 bits (460), Expect = 2.7e-42
Identity = 86/93 (92.47%), Postives = 89/93 (95.70%), Query Frame = 0


Query: 1   MRTSFPRVNVTVGVKETRMMMTGMHTVADIFCVGCGSIVGWTYETAFEKNQKYKEGKSVL 60
           MRTSFPRVNV++GVKETRMMMTGMHTVADIFCVGCGSIVGWTYETAFEK+QKYKEGKSVL
Sbjct: 521 MRTSFPRVNVSIGVKETRMMMTGMHTVADIFCVGCGSIVGWTYETAFEKSQKYKEGKSVL 580

Query: 61  ERFKVSGPGGTSYWVSHAHSHEAAHVGGSDADE 94
           ER KVSGPGGTSYWVSHAH HE AH GGSDADE
Sbjct: 581 ERSKVSGPGGTSYWVSHAHGHETAHGGGSDADE 613

[Close]

BLAST of Tan0002972.3 vs. NCBI nr
Match: XP_038884693.1 (protein yippee-like [Benincasa hispida] >XP_038884694.1 protein yippee-like [Benincasa hispida])

HSP 1 Score: 176.0 bits (445), Expect = 1.5e-40
Identity = 84/87 (96.55%), Postives = 85/87 (97.70%), Query Frame = 0


Query: 8   VNVTVGVKETRMMMTGMHTVADIFCVGCGSIVGWTYETAFEKNQKYKEGKSVLERFKVSG 67
           VNV+VGVKETRMMMTGMHTVADIFCVGCGSIVGWTYETAFEKNQKYKEGKSVLERFKVSG
Sbjct: 48  VNVSVGVKETRMMMTGMHTVADIFCVGCGSIVGWTYETAFEKNQKYKEGKSVLERFKVSG 107

Query: 68  PGGTSYWVSHAHSHEAAHVGGSDADEA 95
           PGGTSYWVSHAHSHE AH GGSDADEA
Sbjct: 108 PGGTSYWVSHAHSHETAHGGGSDADEA 134

[Close]

BLAST of Tan0002972.3 vs. NCBI nr
Match: XP_022923565.1 (protein yippee-like [Cucurbita moschata] >XP_022923574.1 protein yippee-like [Cucurbita moschata] >XP_022923582.1 protein yippee-like [Cucurbita moschata] >XP_022989912.1 protein yippee-like [Cucurbita maxima] >XP_022989913.1 protein yippee-like [Cucurbita maxima] >XP_022989914.1 protein yippee-like [Cucurbita maxima] >XP_023550465.1 protein yippee-like isoform X1 [Cucurbita pepo subsp. pepo] >XP_023550539.1 protein yippee-like isoform X2 [Cucurbita pepo subsp. pepo] >XP_023550608.1 protein yippee-like isoform X2 [Cucurbita pepo subsp. pepo] >XP_023550669.1 protein yippee-like isoform X1 [Cucurbita pepo subsp. pepo] >XP_023550750.1 protein yippee-like isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 174.5 bits (441), Expect = 4.4e-40
Identity = 84/87 (96.55%), Postives = 84/87 (96.55%), Query Frame = 0


Query: 8   VNVTVGVKETRMMMTGMHTVADIFCVGCGSIVGWTYETAFEKNQKYKEGKSVLERFKVSG 67
           VNVTVGVKETRMMMTGMHTVADIFCVGCGSIVGWTYETAFEKNQKYKEGKSVLERFKVSG
Sbjct: 48  VNVTVGVKETRMMMTGMHTVADIFCVGCGSIVGWTYETAFEKNQKYKEGKSVLERFKVSG 107

Query: 68  PGGTSYWVSHAHSHEAAHVGGSDADEA 95
           PGGTSYWVSHA SHE AH GGSDADEA
Sbjct: 108 PGGTSYWVSHARSHEVAHGGGSDADEA 134

[Close]

BLAST of Tan0002972.3 vs. NCBI nr
Match: XP_004138427.1 (protein yippee-like [Cucumis sativus] >XP_031742575.1 protein yippee-like [Cucumis sativus] >KGN45782.1 hypothetical protein Csa_005069 [Cucumis sativus])

HSP 1 Score: 174.5 bits (441), Expect = 4.4e-40
Identity = 83/87 (95.40%), Postives = 84/87 (96.55%), Query Frame = 0


Query: 8   VNVTVGVKETRMMMTGMHTVADIFCVGCGSIVGWTYETAFEKNQKYKEGKSVLERFKVSG 67
           VNV+VGVKETRMMMTGMHTVADIFCVGCGSIVGWTYETAFEKNQKYKEGKSVLERFKVSG
Sbjct: 48  VNVSVGVKETRMMMTGMHTVADIFCVGCGSIVGWTYETAFEKNQKYKEGKSVLERFKVSG 107

Query: 68  PGGTSYWVSHAHSHEAAHVGGSDADEA 95
           PGGTSYWVSH HSHE AH GGSDADEA
Sbjct: 108 PGGTSYWVSHTHSHETAHGGGSDADEA 134

[Close]

BLAST of Tan0002972.3 vs. NCBI nr
Match: KAG6602621.1 (putative zinc metalloprotease EGY2, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 174.5 bits (441), Expect = 4.4e-40
Identity = 84/87 (96.55%), Postives = 84/87 (96.55%), Query Frame = 0


Query: 8   VNVTVGVKETRMMMTGMHTVADIFCVGCGSIVGWTYETAFEKNQKYKEGKSVLERFKVSG 67
           VNVTVGVKETRMMMTGMHTVADIFCVGCGSIVGWTYETAFEKNQKYKEGKSVLERFKVSG
Sbjct: 769 VNVTVGVKETRMMMTGMHTVADIFCVGCGSIVGWTYETAFEKNQKYKEGKSVLERFKVSG 828

Query: 68  PGGTSYWVSHAHSHEAAHVGGSDADEA 95
           PGGTSYWVSHA SHE AH GGSDADEA
Sbjct: 829 PGGTSYWVSHARSHEVAHGGGSDADEA 855

[Close]

BLAST of Tan0002972.3 vs. ExPASy TrEMBL
Match: A0A6J1JRQ1 (Protein yippee-like OS=Cucurbita maxima OX=3661 GN=LOC111486961 PE=3 SV=1)

HSP 1 Score: 174.5 bits (441), Expect = 2.1e-40
Identity = 84/87 (96.55%), Postives = 84/87 (96.55%), Query Frame = 0


Query: 8   VNVTVGVKETRMMMTGMHTVADIFCVGCGSIVGWTYETAFEKNQKYKEGKSVLERFKVSG 67
           VNVTVGVKETRMMMTGMHTVADIFCVGCGSIVGWTYETAFEKNQKYKEGKSVLERFKVSG
Sbjct: 48  VNVTVGVKETRMMMTGMHTVADIFCVGCGSIVGWTYETAFEKNQKYKEGKSVLERFKVSG 107

Query: 68  PGGTSYWVSHAHSHEAAHVGGSDADEA 95
           PGGTSYWVSHA SHE AH GGSDADEA
Sbjct: 108 PGGTSYWVSHARSHEVAHGGGSDADEA 134

[Close]

BLAST of Tan0002972.3 vs. ExPASy TrEMBL
Match: A0A6J1E6I1 (Protein yippee-like OS=Cucurbita moschata OX=3662 GN=LOC111431212 PE=3 SV=1)

HSP 1 Score: 174.5 bits (441), Expect = 2.1e-40
Identity = 84/87 (96.55%), Postives = 84/87 (96.55%), Query Frame = 0


Query: 8   VNVTVGVKETRMMMTGMHTVADIFCVGCGSIVGWTYETAFEKNQKYKEGKSVLERFKVSG 67
           VNVTVGVKETRMMMTGMHTVADIFCVGCGSIVGWTYETAFEKNQKYKEGKSVLERFKVSG
Sbjct: 48  VNVTVGVKETRMMMTGMHTVADIFCVGCGSIVGWTYETAFEKNQKYKEGKSVLERFKVSG 107

Query: 68  PGGTSYWVSHAHSHEAAHVGGSDADEA 95
           PGGTSYWVSHA SHE AH GGSDADEA
Sbjct: 108 PGGTSYWVSHARSHEVAHGGGSDADEA 134

[Close]

BLAST of Tan0002972.3 vs. ExPASy TrEMBL
Match: A0A0A0KBL4 (Protein yippee-like OS=Cucumis sativus OX=3659 GN=Csa_6G011570 PE=3 SV=1)

HSP 1 Score: 174.5 bits (441), Expect = 2.1e-40
Identity = 83/87 (95.40%), Postives = 84/87 (96.55%), Query Frame = 0


Query: 8   VNVTVGVKETRMMMTGMHTVADIFCVGCGSIVGWTYETAFEKNQKYKEGKSVLERFKVSG 67
           VNV+VGVKETRMMMTGMHTVADIFCVGCGSIVGWTYETAFEKNQKYKEGKSVLERFKVSG
Sbjct: 48  VNVSVGVKETRMMMTGMHTVADIFCVGCGSIVGWTYETAFEKNQKYKEGKSVLERFKVSG 107

Query: 68  PGGTSYWVSHAHSHEAAHVGGSDADEA 95
           PGGTSYWVSH HSHE AH GGSDADEA
Sbjct: 108 PGGTSYWVSHTHSHETAHGGGSDADEA 134

[Close]

BLAST of Tan0002972.3 vs. ExPASy TrEMBL
Match: A0A1S3B3I1 (Protein yippee-like OS=Cucumis melo OX=3656 GN=LOC103485564 PE=3 SV=1)

HSP 1 Score: 172.9 bits (437), Expect = 6.2e-40
Identity = 82/87 (94.25%), Postives = 83/87 (95.40%), Query Frame = 0


Query: 8   VNVTVGVKETRMMMTGMHTVADIFCVGCGSIVGWTYETAFEKNQKYKEGKSVLERFKVSG 67
           VNV+VGVKETRMMMTGMHTVADIFCVGCGSIVGWTYETAFEKNQKYKEGKSVLERFKVSG
Sbjct: 48  VNVSVGVKETRMMMTGMHTVADIFCVGCGSIVGWTYETAFEKNQKYKEGKSVLERFKVSG 107

Query: 68  PGGTSYWVSHAHSHEAAHVGGSDADEA 95
           PGGTSYWVSH HSHE  H GGSDADEA
Sbjct: 108 PGGTSYWVSHTHSHETGHGGGSDADEA 134

[Close]

BLAST of Tan0002972.3 vs. ExPASy TrEMBL
Match: A0A6J1JR81 (Protein yippee-like OS=Cucurbita maxima OX=3661 GN=LOC111489098 PE=3 SV=1)

HSP 1 Score: 167.5 bits (423), Expect = 2.6e-38
Identity = 79/86 (91.86%), Postives = 82/86 (95.35%), Query Frame = 0


Query: 8   VNVTVGVKETRMMMTGMHTVADIFCVGCGSIVGWTYETAFEKNQKYKEGKSVLERFKVSG 67
           VNV++GVKETRMMMTGMHTVADIFCVGCGSIVGWTYETAFEK+QKYKEGKSVLER KVSG
Sbjct: 48  VNVSIGVKETRMMMTGMHTVADIFCVGCGSIVGWTYETAFEKSQKYKEGKSVLERSKVSG 107

Query: 68  PGGTSYWVSHAHSHEAAHVGGSDADE 94
           PGGTSYWVSHAH HE AH GGSDADE
Sbjct: 108 PGGTSYWVSHAHGHETAHGGGSDADE 133

[Close]

BLAST of Tan0002972.3 vs. TAIR 10
Match: AT2G40110.1 (Yippee family putative zinc-binding protein )

HSP 1 Score: 131.0 bits (328), Expect = 5.2e-31
Identity = 64/86 (74.42%), Postives = 72/86 (83.72%), Query Frame = 0


Query: 9   NVTVGVKETRMMMTGMHTVADIFCVGCGSIVGWTYETAFEKNQKYKEGKSVLERFKVSGP 68
           NV++G  E R+MMTG HTVADIFCV CGSIVGW YETA EKNQKYKEGKSVLERFK+SGP
Sbjct: 49  NVSIGETEERLMMTGKHTVADIFCVSCGSIVGWKYETAHEKNQKYKEGKSVLERFKISGP 108

Query: 69  GGTSYWVSHAHSHEAAHVGGSDADEA 95
            G++YWVS   SH   H+GGSDAD+A
Sbjct: 109 DGSNYWVS---SH-GRHIGGSDADDA 130

[Close]

BLAST of Tan0002972.3 vs. TAIR 10
Match: AT3G11230.1 (Yippee family putative zinc-binding protein )

HSP 1 Score: 117.1 bits (292), Expect = 7.7e-27
Identity = 58/87 (66.67%), Postives = 64/87 (73.56%), Query Frame = 0


Query: 8   VNVTVGVKETRMMMTGMHTVADIFCVGCGSIVGWTYETAFEKNQKYKEGKSVLERFKVSG 67
           VNV  G KE RMMMTGMHTV DI+CV CGS VGW YE AFEKNQKYKEGKSVLER+KV G
Sbjct: 48  VNVYAGKKEDRMMMTGMHTVVDIYCVKCGSYVGWKYEFAFEKNQKYKEGKSVLERYKVWG 107

Query: 68  PGGTSYWVSHAHSHEAAHVGGSDADEA 95
           P G +YWV+     +    G SD D+A
Sbjct: 108 PDGNNYWVA-----QEVEAGDSDTDDA 129

[Close]

BLAST of Tan0002972.3 vs. TAIR 10
Match: AT3G11230.2 (Yippee family putative zinc-binding protein )

HSP 1 Score: 117.1 bits (292), Expect = 7.7e-27
Identity = 58/87 (66.67%), Postives = 64/87 (73.56%), Query Frame = 0


Query: 8   VNVTVGVKETRMMMTGMHTVADIFCVGCGSIVGWTYETAFEKNQKYKEGKSVLERFKVSG 67
           VNV  G KE RMMMTGMHTV DI+CV CGS VGW YE AFEKNQKYKEGKSVLER+KV G
Sbjct: 81  VNVYAGKKEDRMMMTGMHTVVDIYCVKCGSYVGWKYEFAFEKNQKYKEGKSVLERYKVWG 140

Query: 68  PGGTSYWVSHAHSHEAAHVGGSDADEA 95
           P G +YWV+     +    G SD D+A
Sbjct: 141 PDGNNYWVA-----QEVEAGDSDTDDA 162

[Close]

BLAST of Tan0002972.3 vs. TAIR 10
Match: AT3G08990.1 (Yippee family putative zinc-binding protein )

HSP 1 Score: 104.4 bits (259), Expect = 5.2e-23
Identity = 48/66 (72.73%), Postives = 55/66 (83.33%), Query Frame = 0


Query: 8   VNVTVGVKETRMMMTGMHTVADIFCVGCGSIVGWTYETAFEKNQKYKEGKSVLERFKVSG 67
           VNVTVG KE R+M+TG HTVADIFCV CGS+VGW YE A++K+QKYKEGK +LERFKV G
Sbjct: 48  VNVTVGEKEHRVMITGWHTVADIFCVSCGSLVGWKYEIAYDKSQKYKEGKFILERFKVLG 107

Query: 68  PGGTSY 74
           P G  Y
Sbjct: 108 PYGGGY 113

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BLAST of Tan0002972.3 vs. TAIR 10
Match: AT3G08990.2 (Yippee family putative zinc-binding protein )

HSP 1 Score: 104.4 bits (259), Expect = 5.2e-23
Identity = 48/66 (72.73%), Postives = 55/66 (83.33%), Query Frame = 0


Query: 8   VNVTVGVKETRMMMTGMHTVADIFCVGCGSIVGWTYETAFEKNQKYKEGKSVLERFKVSG 67
           VNVTVG KE R+M+TG HTVADIFCV CGS+VGW YE A++K+QKYKEGK +LERFKV G
Sbjct: 48  VNVTVGEKEHRVMITGWHTVADIFCVSCGSLVGWKYEIAYDKSQKYKEGKFILERFKVLG 107

Query: 68  PGGTSY 74
           P G  Y
Sbjct: 108 PYGGGY 113

The following BLAST results are available for this feature:

BLAST of Tan0002972.3 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P59234	1.0e-28	73.26	Protein yippee-like OS=Solanum tuberosum OX=4113 PE=2 SV=1	[more]
Q9C777	1.1e-25	66.67	Protein yippee-like At3g11230 OS=Arabidopsis thaliana OX=3702 GN=At3g11230 PE=2 ...	[more]
Q9SR97	7.3e-22	72.73	Protein yippee-like At3g08990 OS=Arabidopsis thaliana OX=3702 GN=At3g08990 PE=2 ...	[more]
Q9LY56	1.1e-20	69.57	Protein yippee-like At3g55890 OS=Arabidopsis thaliana OX=3702 GN=At3g55890 PE=2 ...	[more]
Q9FN32	3.9e-15	63.79	Protein yippee-like At5g53940 OS=Arabidopsis thaliana OX=3702 GN=At5g53940 PE=2 ...	[more]

BLAST of Tan0002972.3 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6578446.1	2.7e-42	92.47	putative zinc metalloprotease EGY2, chloroplastic, partial [Cucurbita argyrosper...	[more]
XP_038884693.1	1.5e-40	96.55	protein yippee-like [Benincasa hispida] >XP_038884694.1 protein yippee-like [Ben...	[more]
XP_022923565.1	4.4e-40	96.55	protein yippee-like [Cucurbita moschata] >XP_022923574.1 protein yippee-like [Cu...	[more]
XP_004138427.1	4.4e-40	95.40	protein yippee-like [Cucumis sativus] >XP_031742575.1 protein yippee-like [Cucum...	[more]
KAG6602621.1	4.4e-40	96.55	putative zinc metalloprotease EGY2, chloroplastic, partial [Cucurbita argyrosper...	[more]

BLAST of Tan0002972.3 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1JRQ1	2.1e-40	96.55	Protein yippee-like OS=Cucurbita maxima OX=3661 GN=LOC111486961 PE=3 SV=1	[more]
A0A6J1E6I1	2.1e-40	96.55	Protein yippee-like OS=Cucurbita moschata OX=3662 GN=LOC111431212 PE=3 SV=1	[more]
A0A0A0KBL4	2.1e-40	95.40	Protein yippee-like OS=Cucumis sativus OX=3659 GN=Csa_6G011570 PE=3 SV=1	[more]
A0A1S3B3I1	6.2e-40	94.25	Protein yippee-like OS=Cucumis melo OX=3656 GN=LOC103485564 PE=3 SV=1	[more]
A0A6J1JR81	2.6e-38	91.86	Protein yippee-like OS=Cucurbita maxima OX=3661 GN=LOC111489098 PE=3 SV=1	[more]

BLAST of Tan0002972.3 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G40110.1	5.2e-31	74.42	Yippee family putative zinc-binding protein	[more]
AT3G11230.1	7.7e-27	66.67	Yippee family putative zinc-binding protein	[more]
AT3G11230.2	7.7e-27	66.67	Yippee family putative zinc-binding protein	[more]
AT3G08990.1	5.2e-23	72.73	Yippee family putative zinc-binding protein	[more]
AT3G08990.2	5.2e-23	72.73	Yippee family putative zinc-binding protein	[more]

InterPro

Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25

Position :

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x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR004910	Yippee/Mis18/Cereblon	PFAM	PF03226	Yippee-Mis18	coord: 9..65 e-value: 3.3E-9 score: 36.9
None	No IPR available	PANTHER	PTHR13848:SF75	PROTEIN YIPPEE-LIKE	coord: 8..93
IPR039058	Yippee family	PANTHER	PTHR13848	PROTEIN YIPPEE-LIKE CG15309-RELATED	coord: 8..93
IPR034751	Yippee domain	PROSITE	PS51792	YIPPEE	coord: 1..69 score: 30.194075

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Tan0002972	Tan0002972	gene

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Tan0002972.3-three_prime_utr	Tan0002972.3-three_prime_utr-LG11:2125133..2125379	three_prime_UTR

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Tan0002972.3-exon	Tan0002972.3-exon-LG11:2125133..2125479	exon
Tan0002972.3-exon	Tan0002972.3-exon-LG11:2126658..2126713	exon
Tan0002972.3-exon	Tan0002972.3-exon-LG11:2126818..2126926	exon
Tan0002972.3-exon	Tan0002972.3-exon-LG11:2127723..2127820	exon
Tan0002972.3-exon	Tan0002972.3-exon-LG11:2127998..2128463	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Tan0002972.3-cds	Tan0002972.3-cds-LG11:2125380..2125479	CDS
Tan0002972.3-cds	Tan0002972.3-cds-LG11:2126658..2126713	CDS
Tan0002972.3-cds	Tan0002972.3-cds-LG11:2126818..2126926	CDS
Tan0002972.3-cds	Tan0002972.3-cds-LG11:2127723..2127742	CDS

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Tan0002972.3-five_prime_utr	Tan0002972.3-five_prime_utr-LG11:2127743..2127820	five_prime_UTR
Tan0002972.3-five_prime_utr	Tan0002972.3-five_prime_utr-LG11:2127998..2128463	five_prime_UTR

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Tan0002972.3	Tan0002972.3-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009765	photosynthesis, light harvesting
biological_process	GO:0018298	protein-chromophore linkage
cellular_component	GO:0009535	chloroplast thylakoid membrane
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0009522	photosystem I
cellular_component	GO:0009523	photosystem II
cellular_component	GO:0000151	ubiquitin ligase complex
molecular_function	GO:0016168	chlorophyll binding
molecular_function	GO:0046872	metal ion binding