Tan0002972 (gene) Snake gourd v1

Overview


Name	Tan0002972
Type	gene
Organism	Trichosanthes anguina (Snake gourd v1)
Description	Protein yippee-like
Location	LG11: 2125133 .. 2128463 (-)
RNA-Seq Expression	Tan0002972
Synteny	Tan0002972

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GAGAGATAAGAGAAGATACGAATCCTTTGTGCCACTGCTGACTTCGCTGGTTCAACAGAACCTCAAAACGACGATGCCTTTAGCCCGCAAATTTCTCAACAGTTCACAGTCAGCGCCGGCTGCCGCCGACAGCAGTCAGCTCCATGGACTTCGCTTCATAAAATGGTAGAAATGGCGGCGGGCTTAGCAGCGATCGCTGGAACTAGCTGTTTCTCTCGAAGAATTGGGAGATGAAATGGAATGAAGTTTATGAGGGAACCCAAAAAGATATATGAGAAAATAATAAAAAAAATTTCCAAGTGGAAAAAAGGAAGTCGAAACGAAAAGTTGATTGCATTAGCATCCACGTCGTATCGGGTTTAAAGGGACCGTCTTTACAGAGAAAGTGGTATTTATAATTGGCGAGACGTGACCAAATTTCTCTGTCCACATTTCTTGTAACTTGCGACTACCCACAAGAAGATAGGTAAAGTTCCATTTTGATTCTCTTCCCCTCCCTTCCTTTCCCTCTTTTTCTTCAATTTATTCCTTGCTTCTCACTTGATTCTTCCTCTTCTTCTTCTATTTTTTGTTCTGATTGCTTGAGCAACTCAATTTCTGATAACCCATTTTTCCCCTTTCGATTTTTTATGAGATTTCAAAGTCATGGGGAGGTTGTTCGTGGTGAGCCTCGAAGGAAGGATCTATAGCTGCAAGCACTGCCGAACCCATCTTGCTCTTTATGAGGACATCGTTTCCAAGGTTTTGATACACAATAACTGTTCATTTCTGATTTCTGATCTGATTTTTTTCTATGGATTTTTCATTAATTTGCCTATACTCTTTTCTAATGCGATGACAATATTGATTGACCCTTTAATATGGTAAGAAATATGTGGTGTTTGACTGTTTAAATTGTCCTTGTTATTAGAAGGATCAGCCCCCAACCCCAAGCTTCTTCTTGGGGCTTTTCTTAACTTGATGATCTTAATTTTAATTAGAAATTTGATTGAGTATATATATTAGCTCTACCCTTTGAATATTCATTTTCAGACTAAAAGATACTAGGAATGTCATTGGAGAAAAGTGTTCTGACTTAATTTTTTCCTGTGTTTCTATTATTCAGTCTTTCCAATCCAGACATGGGAAAGCTTACCTCTTCAATAAAGTGTAAGTTTTCCTGGATGATAGTAGTAATTTGGCCAAATGATTCCATTAAAGATCCCAAATCTCCTTTGTTTCTTTCCAATGACAAACTAAGAGAACGGGGATGAAGGTCAAATCCGAACTTGTTTAATCTCCCTTTTTCTTTCTTTTTATCTAACGGCTCCTTTTAAGTTTTAGTTTTCTTCTTGTCATTTTTATTCATAACTTCTGTATATGCTGCCGCTCTTCCTTGGCTACTGTTTTTGGTTTTTGTATAATTCAAGTGAATGTGTTCGTCATTTGAAGTGAAGCTTCATCATCCTCTATATTTGATAAGATTGAATGAAGTTCAAACTTATTTATTCATTTTCTCTTTAAGAATTGAGTCCAATCTTGTTTTTTTTTTTAACAGAGTGAATGTTACTGTTGGAGTGAAAGAAACGAGAATGATGATGACGGGGATGCATACTGTTGCTGATATCTTCTGTGTTGGCTGTGGATCAATTGTGGGATGGACATATGTAAGATATCATAAATCAGAAAGGCTTAGAAGTTCTATGCTGTTATGTTCTTATTCATGGTCTTATTATACCTTCTTTTGATGATCTTTGATCGTCCACTTCAGGAAACTGCCTTTGAAAAGAACCAGAAGTACAAAGAAGGGAAGTCTGTACTGGAGCGGTAAGTAAATGTACATGACGAATAATTTTATATCAGATGAGGCTTAATATTTTACAGTAAGTTGCTTTGAATCATTACTTTTAAGGCTTGAAGCTGCTCTAAAATGTCCATTTTTTTTTTGGAAAGACCATCTTTCTTGATCATAGTTAAGAAAATGGTCTTATTGGGTTCTTTGGATCATCTCGTCATTCATCATTTGGAAAAGAAATATTACATGACAGAGCATGAGACTAGTGTAATAGCTCGTAGAATATTTATTTTACAAACATGGTAGACGATAGATTTGCCTTCTTGTTATGTGTCTATCCCTTTTAATTGTGCAATAATCTAAAATATACAAATATACCTACCATATCAGTGAAATTGGCTACATATAAGTTATCCAATCATCTCCTAACTTATCATATCAAATATCACATCATCAACAAAATTGTTCAGGATGAACTGATTTAAGATTATTTAGAACAACTTTCAAAATTTTAGAGGTTAAATTATCGTAGTTTTAGCTCCAAGGACCAGTTAAAATCATATCTTGAACTATAGAGACTAATGCCTTTTTTCCTCATCTTTTTTTTTTTTTTCATTAGAGCACTTCAAATTTTCATTTTTAACGTTATCTAGTTTCAACCATACAGTAATTTCATCGCCACCCCCACCCAGGTCGTTTATTGTGGTTGGCTTGTTTTTGTTTTTGTGCTATTTTATGGGGTCCTTTAGCGAGAAAGAAGCAATAAAATTTTTAGGGGGATTGAAGAGACCTTAGGGCGAGGTTTGATCCTTTGTTAGATTTCATGTGTCTTTCTAGGTCTTATTTTGCTTGATTGGGGCCCCTTTTCAGTTTAGTTGGACTTCTCTCGTGGGGTGTTTTTTTGTATTATCTCTCGTATTCTTTCATTCGATCTCAACAAAAGTGTGGTTTATAATAATTTCATATTGCACAAGATCTCATCTTCGTGTATAAACATCTTGAGAACATTCTATTATCACATTGAATATTTATATATCTCAGAGGTTGCAGAGCGAGTAGTGGTAAAGTTTTATAGAGTAATAGACCAGAAAGACTTGTGCAATGGAGAATTTGTCCAAGATAACTTATAAGGGGCAGTGAAGTAGTACAAGTTAGTTGTATTAGGTGGAAATGGGAATTAGGGTTAAGCATTTGTTGTGTTGATGAACAGATTCAAGGTGTCAGGCCCTGGTGGAACCAGTTATTGGGTCAGTCATGCTCATAGTCATGAAGCAGCTCATGTTGGAGGAAGTGATGCAGATGAAGCTTGAAGGTGATGATGATAATGCTCACTCATAATTAATTCCAAACTGTACATTCTGCTCACTCACAATGTTCATATTGTTCTTCATCTGCAATTCCTCATTTCAGCAGCTAACCTGCTTGCTGCTTGTAACCAAACTGGACATTTGATTCTCATTCTTCTGCAACTTAATATTACTCAACTTTGCAATATGATGAAGTGTTTTTCAACAAATTTGTGTCCTTCTTTTGGTTAAATATATTAGTTTGCCCCAA

mRNA sequence

GAGAGATAAGAGAAGATACGAATCCTTTGTGCCACTGCTGACTTCGCTGGTTCAACAGAACCTCAAAACGACGATGCCTTTAGCCCGCAAATTTCTCAACAGTTCACAGTCAGCGCCGGCTGCCGCCGACAGCAGTCAGCTCCATGGACTTCGCTTCATAAAATGGTAGAAATGGCGGCGGGCTTAGCAGCGATCGCTGGAACTAGCTGTTTCTCTCGAAGAATTGGGAGATGAAATGGAATGAAGTTTATGAGGGAACCCAAAAAGATATATGAGAAAATAATAAAAAAAATTTCCAAGTGGAAAAAAGGAAGTCGAAACGAAAAGTTGATTGCATTAGCATCCACGTCGTATCGGGTTTAAAGGGACCGTCTTTACAGAGAAAGTGGTATTTATAATTGGCGAGACGTGACCAAATTTCTCTGTCCACATTTCTTGTAACTTGCGACTACCCACAAGAAGATAGTCATGGGGAGGTTGTTCGTGGTGAGCCTCGAAGGAAGGATCTATAGCTGCAAGCACTGCCGAACCCATCTTGCTCTTTATGAGGACATCGTTTCCAAGTCTTTCCAATCCAGACATGGGAAAGCTTACCTCTTCAATAAAGTAGTGAATGTTACTGTTGGAGTGAAAGAAACGAGAATGATGATGACGGGGATGCATACTGTTGCTGATATCTTCTGTGTTGGCTGTGGATCAATTGTGGGATGGACATATGAAACTGCCTTTGAAAAGAACCAGAAGTACAAAGAAGGGAAGTCTGTACTGGAGCGATTCAAGGTGTCAGGCCCTGGTGGAACCAGTTATTGGGTCAGTCATGCTCATAGTCATGAAGCAGCTCATGTTGGAGGAAGTGATGCAGATGAAGCTTGAAGGTGATGATGATAATGCTCACTCATAATTAATTCCAAACTGTACATTCTGCTCACTCACAATGTTCATATTGTTCTTCATCTGCAATTCCTCATTTCAGCAGCTAACCTGCTTGCTGCTTGTAACCAAACTGGACATTTGATTCTCATTCTTCTGCAACTTAATATTACTCAACTTTGCAATATGATGAAGTGTTTTTCAACAAATTTGTGTCCTTCTTTTGGTTAAATATATTAGTTTGCCCCAA

Coding sequence (CDS)

ATGGGGAGGTTGTTCGTGGTGAGCCTCGAAGGAAGGATCTATAGCTGCAAGCACTGCCGAACCCATCTTGCTCTTTATGAGGACATCGTTTCCAAGTCTTTCCAATCCAGACATGGGAAAGCTTACCTCTTCAATAAAGTAGTGAATGTTACTGTTGGAGTGAAAGAAACGAGAATGATGATGACGGGGATGCATACTGTTGCTGATATCTTCTGTGTTGGCTGTGGATCAATTGTGGGATGGACATATGAAACTGCCTTTGAAAAGAACCAGAAGTACAAAGAAGGGAAGTCTGTACTGGAGCGATTCAAGGTGTCAGGCCCTGGTGGAACCAGTTATTGGGTCAGTCATGCTCATAGTCATGAAGCAGCTCATGTTGGAGGAAGTGATGCAGATGAAGCTTGA

Protein sequence

MGRLFVVSLEGRIYSCKHCRTHLALYEDIVSKSFQSRHGKAYLFNKVVNVTVGVKETRMMMTGMHTVADIFCVGCGSIVGWTYETAFEKNQKYKEGKSVLERFKVSGPGGTSYWVSHAHSHEAAHVGGSDADEA

Homology

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BLAST of Tan0002972 vs. ExPASy Swiss-Prot
Match: P59234 (Protein yippee-like OS=Solanum tuberosum OX=4113 PE=2 SV=1)

HSP 1 Score: 205.3 bits (521), Expect = 4.3e-52
Identity = 100/133 (75.19%), Postives = 111/133 (83.46%), Query Frame = 0


Query: 1   MGRLFVVSLEGRIYSCKHCRTHLALYEDIVSKSFQSRHGKAYLFNKVVNVTVGVKETRMM 60
           MGRLFV++LEG+IYSCKHC THLAL E+IVSKSF  +HGKAYLF+KVVNVT G  E RMM
Sbjct: 1   MGRLFVLTLEGKIYSCKHCGTHLALSENIVSKSFHCKHGKAYLFSKVVNVTSGEIENRMM 60

Query: 61  MTGMHTVADIFCVGCGSIVGWTYETAFEKNQKYKEGKSVLERFKVSGPGGTSYWVSHAHS 120
           MTGMHTVADIFCV CGSIVGW YETA EK+QKYKEGKSVLERFK++GP G+ YW SH   
Sbjct: 61  MTGMHTVADIFCVCCGSIVGWKYETAHEKSQKYKEGKSVLERFKITGPDGSHYWASH--- 120

Query: 121 HEAAHVGGSDADE 134
               HV GSDAD+
Sbjct: 121 --DTHVAGSDADD 128

[Close]

BLAST of Tan0002972 vs. ExPASy Swiss-Prot
Match: Q9C777 (Protein yippee-like At3g11230 OS=Arabidopsis thaliana OX=3702 GN=At3g11230 PE=2 SV=1)

HSP 1 Score: 197.2 bits (500), Expect = 1.2e-49
Identity = 95/134 (70.90%), Postives = 109/134 (81.34%), Query Frame = 0


Query: 1   MGRLFVVSLEGRIYSCKHCRTHLALYEDIVSKSFQSRHGKAYLFNKVVNVTVGVKETRMM 60
           MGRLF+V+LEG+ YSCKHC+T+LAL +D+VSKSFQSRHGKAYLF+KVVNV  G KE RMM
Sbjct: 1   MGRLFLVNLEGKSYSCKHCKTNLALCDDVVSKSFQSRHGKAYLFSKVVNVYAGKKEDRMM 60

Query: 61  MTGMHTVADIFCVGCGSIVGWTYETAFEKNQKYKEGKSVLERFKVSGPGGTSYWVSHAHS 120
           MTGMHTV DI+CV CGS VGW YE AFEKNQKYKEGKSVLER+KV GP G +YWV+    
Sbjct: 61  MTGMHTVVDIYCVKCGSYVGWKYEFAFEKNQKYKEGKSVLERYKVWGPDGNNYWVA---- 120

Query: 121 HEAAHVGGSDADEA 135
            +    G SD D+A
Sbjct: 121 -QEVEAGDSDTDDA 129

[Close]

BLAST of Tan0002972 vs. ExPASy Swiss-Prot
Match: Q9SR97 (Protein yippee-like At3g08990 OS=Arabidopsis thaliana OX=3702 GN=At3g08990 PE=2 SV=2)

HSP 1 Score: 173.3 bits (438), Expect = 1.8e-42
Identity = 78/113 (69.03%), Postives = 94/113 (83.19%), Query Frame = 0


Query: 1   MGRLFVVSLEGRIYSCKHCRTHLALYEDIVSKSFQSRHGKAYLFNKVVNVTVGVKETRMM 60
           MGRLFV+ LEG +YSCK+C+TH A+  DI+SKSF  +HG+AYLF+ VVNVTVG KE R+M
Sbjct: 1   MGRLFVIDLEGLVYSCKYCQTHFAVTNDIISKSFHCKHGRAYLFDNVVNVTVGEKEHRVM 60

Query: 61  MTGMHTVADIFCVGCGSIVGWTYETAFEKNQKYKEGKSVLERFKVSGPGGTSY 114
           +TG HTVADIFCV CGS+VGW YE A++K+QKYKEGK +LERFKV GP G  Y
Sbjct: 61  ITGWHTVADIFCVSCGSLVGWKYEIAYDKSQKYKEGKFILERFKVLGPYGGGY 113

[Close]

BLAST of Tan0002972 vs. ExPASy Swiss-Prot
Match: Q9LY56 (Protein yippee-like At3g55890 OS=Arabidopsis thaliana OX=3702 GN=At3g55890 PE=2 SV=1)

HSP 1 Score: 165.2 bits (417), Expect = 5.0e-40
Identity = 78/116 (67.24%), Postives = 95/116 (81.90%), Query Frame = 0


Query: 1   MGRLFVVSLEGRIYSCKHCRTHLALYEDIVSKSFQSRHGKAYLFNKVVNVTVGVKETRMM 60
           MGR+F+V LEG IY CK C+THL+  +DI+SKSFQ ++G+AYLFN VVNV+VG KE RMM
Sbjct: 1   MGRVFMVDLEGNIYICKLCKTHLSTDQDIMSKSFQCKNGRAYLFNNVVNVSVGEKEDRMM 60

Query: 61  MTGMHTVADIFCVGCGSIVGWTYETAFEKNQKYKEGKSVLERFKVSGPGGTSYWVS 117
           +TG+H V DIFCVGCGS VGW YE A EK+QKYKEGKSVLE +K+SGP  ++  VS
Sbjct: 61  ITGLHNVVDIFCVGCGSNVGWKYEFAHEKSQKYKEGKSVLELYKISGPHDSNDLVS 116

[Close]

BLAST of Tan0002972 vs. ExPASy Swiss-Prot
Match: Q9FN32 (Protein yippee-like At5g53940 OS=Arabidopsis thaliana OX=3702 GN=At5g53940 PE=2 SV=1)

HSP 1 Score: 147.9 bits (372), Expect = 8.2e-35
Identity = 68/105 (64.76%), Postives = 83/105 (79.05%), Query Frame = 0


Query: 1   MGRLFVVSLEGRIYSCKHCRTHLALYEDIVSKSFQSRHGKAYLFNKVVNVTVGVKETRMM 60
           MGR+F V LEGR Y C+ CRTHLAL +D+VS+SF  R GKAYLFN+ VN+++G  E R+M
Sbjct: 1   MGRIFTVELEGRSYRCRFCRTHLALPDDLVSRSFHCRRGKAYLFNRSVNISMGPLEERLM 60

Query: 61  MTGMHTVADIFCVGCGSIVGWTYETAFEKNQKYKEGKSVLERFKV 106
           ++GMHTVADIFC  CG  VGW YE+A EK QKYKEGK VLER ++
Sbjct: 61  LSGMHTVADIFCCCCGQNVGWKYESAHEKAQKYKEGKFVLERGRI 105

[Close]

BLAST of Tan0002972 vs. NCBI nr
Match: XP_038884693.1 (protein yippee-like [Benincasa hispida] >XP_038884694.1 protein yippee-like [Benincasa hispida])

HSP 1 Score: 271.2 bits (692), Expect = 4.9e-69
Identity = 130/134 (97.01%), Postives = 132/134 (98.51%), Query Frame = 0


Query: 1   MGRLFVVSLEGRIYSCKHCRTHLALYEDIVSKSFQSRHGKAYLFNKVVNVTVGVKETRMM 60
           MGRLFVV+LEGRIYSCKHCRTHLALYEDIVSKSFQSRHGKAYLFNKVVNV+VGVKETRMM
Sbjct: 1   MGRLFVVNLEGRIYSCKHCRTHLALYEDIVSKSFQSRHGKAYLFNKVVNVSVGVKETRMM 60

Query: 61  MTGMHTVADIFCVGCGSIVGWTYETAFEKNQKYKEGKSVLERFKVSGPGGTSYWVSHAHS 120
           MTGMHTVADIFCVGCGSIVGWTYETAFEKNQKYKEGKSVLERFKVSGPGGTSYWVSHAHS
Sbjct: 61  MTGMHTVADIFCVGCGSIVGWTYETAFEKNQKYKEGKSVLERFKVSGPGGTSYWVSHAHS 120

Query: 121 HEAAHVGGSDADEA 135
           HE AH GGSDADEA
Sbjct: 121 HETAHGGGSDADEA 134

[Close]

BLAST of Tan0002972 vs. NCBI nr
Match: XP_004138427.1 (protein yippee-like [Cucumis sativus] >XP_031742575.1 protein yippee-like [Cucumis sativus] >KGN45782.1 hypothetical protein Csa_005069 [Cucumis sativus])

HSP 1 Score: 269.6 bits (688), Expect = 1.4e-68
Identity = 129/134 (96.27%), Postives = 131/134 (97.76%), Query Frame = 0


Query: 1   MGRLFVVSLEGRIYSCKHCRTHLALYEDIVSKSFQSRHGKAYLFNKVVNVTVGVKETRMM 60
           MGRLFVV+LEGRIYSCKHCRTHLALYEDIVSKSFQSRHGKAYLFNKVVNV+VGVKETRMM
Sbjct: 1   MGRLFVVNLEGRIYSCKHCRTHLALYEDIVSKSFQSRHGKAYLFNKVVNVSVGVKETRMM 60

Query: 61  MTGMHTVADIFCVGCGSIVGWTYETAFEKNQKYKEGKSVLERFKVSGPGGTSYWVSHAHS 120
           MTGMHTVADIFCVGCGSIVGWTYETAFEKNQKYKEGKSVLERFKVSGPGGTSYWVSH HS
Sbjct: 61  MTGMHTVADIFCVGCGSIVGWTYETAFEKNQKYKEGKSVLERFKVSGPGGTSYWVSHTHS 120

Query: 121 HEAAHVGGSDADEA 135
           HE AH GGSDADEA
Sbjct: 121 HETAHGGGSDADEA 134

[Close]

BLAST of Tan0002972 vs. NCBI nr
Match: XP_022923565.1 (protein yippee-like [Cucurbita moschata] >XP_022923574.1 protein yippee-like [Cucurbita moschata] >XP_022923582.1 protein yippee-like [Cucurbita moschata] >XP_022989912.1 protein yippee-like [Cucurbita maxima] >XP_022989913.1 protein yippee-like [Cucurbita maxima] >XP_022989914.1 protein yippee-like [Cucurbita maxima] >XP_023550465.1 protein yippee-like isoform X1 [Cucurbita pepo subsp. pepo] >XP_023550539.1 protein yippee-like isoform X2 [Cucurbita pepo subsp. pepo] >XP_023550608.1 protein yippee-like isoform X2 [Cucurbita pepo subsp. pepo] >XP_023550669.1 protein yippee-like isoform X1 [Cucurbita pepo subsp. pepo] >XP_023550750.1 protein yippee-like isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 268.9 bits (686), Expect = 2.4e-68
Identity = 130/134 (97.01%), Postives = 130/134 (97.01%), Query Frame = 0


Query: 1   MGRLFVVSLEGRIYSCKHCRTHLALYEDIVSKSFQSRHGKAYLFNKVVNVTVGVKETRMM 60
           MGRLFVVSLEGRIYSCKHCRTHLALYEDIVSKSFQ RHGKAYLFNKVVNVTVGVKETRMM
Sbjct: 1   MGRLFVVSLEGRIYSCKHCRTHLALYEDIVSKSFQCRHGKAYLFNKVVNVTVGVKETRMM 60

Query: 61  MTGMHTVADIFCVGCGSIVGWTYETAFEKNQKYKEGKSVLERFKVSGPGGTSYWVSHAHS 120
           MTGMHTVADIFCVGCGSIVGWTYETAFEKNQKYKEGKSVLERFKVSGPGGTSYWVSHA S
Sbjct: 61  MTGMHTVADIFCVGCGSIVGWTYETAFEKNQKYKEGKSVLERFKVSGPGGTSYWVSHARS 120

Query: 121 HEAAHVGGSDADEA 135
           HE AH GGSDADEA
Sbjct: 121 HEVAHGGGSDADEA 134

[Close]

BLAST of Tan0002972 vs. NCBI nr
Match: KAG6602621.1 (putative zinc metalloprotease EGY2, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 268.9 bits (686), Expect = 2.4e-68
Identity = 130/134 (97.01%), Postives = 130/134 (97.01%), Query Frame = 0


Query: 1   MGRLFVVSLEGRIYSCKHCRTHLALYEDIVSKSFQSRHGKAYLFNKVVNVTVGVKETRMM 60
           MGRLFVVSLEGRIYSCKHCRTHLALYEDIVSKSFQ RHGKAYLFNKVVNVTVGVKETRMM
Sbjct: 722 MGRLFVVSLEGRIYSCKHCRTHLALYEDIVSKSFQCRHGKAYLFNKVVNVTVGVKETRMM 781

Query: 61  MTGMHTVADIFCVGCGSIVGWTYETAFEKNQKYKEGKSVLERFKVSGPGGTSYWVSHAHS 120
           MTGMHTVADIFCVGCGSIVGWTYETAFEKNQKYKEGKSVLERFKVSGPGGTSYWVSHA S
Sbjct: 782 MTGMHTVADIFCVGCGSIVGWTYETAFEKNQKYKEGKSVLERFKVSGPGGTSYWVSHARS 841

Query: 121 HEAAHVGGSDADEA 135
           HE AH GGSDADEA
Sbjct: 842 HEVAHGGGSDADEA 855

[Close]

BLAST of Tan0002972 vs. NCBI nr
Match: XP_008441452.1 (PREDICTED: protein yippee-like [Cucumis melo])

HSP 1 Score: 266.9 bits (681), Expect = 9.2e-68
Identity = 127/134 (94.78%), Postives = 130/134 (97.01%), Query Frame = 0


Query: 1   MGRLFVVSLEGRIYSCKHCRTHLALYEDIVSKSFQSRHGKAYLFNKVVNVTVGVKETRMM 60
           MGRLFVV+LEGRIYSCKHCRTHLALYEDIVSK+FQSRHGKAYLFNKVVNV+VGVKETRMM
Sbjct: 1   MGRLFVVNLEGRIYSCKHCRTHLALYEDIVSKTFQSRHGKAYLFNKVVNVSVGVKETRMM 60

Query: 61  MTGMHTVADIFCVGCGSIVGWTYETAFEKNQKYKEGKSVLERFKVSGPGGTSYWVSHAHS 120
           MTGMHTVADIFCVGCGSIVGWTYETAFEKNQKYKEGKSVLERFKVSGPGGTSYWVSH HS
Sbjct: 61  MTGMHTVADIFCVGCGSIVGWTYETAFEKNQKYKEGKSVLERFKVSGPGGTSYWVSHTHS 120

Query: 121 HEAAHVGGSDADEA 135
           HE  H GGSDADEA
Sbjct: 121 HETGHGGGSDADEA 134

[Close]

BLAST of Tan0002972 vs. ExPASy TrEMBL
Match: A0A0A0KBL4 (Protein yippee-like OS=Cucumis sativus OX=3659 GN=Csa_6G011570 PE=3 SV=1)

HSP 1 Score: 269.6 bits (688), Expect = 6.9e-69
Identity = 129/134 (96.27%), Postives = 131/134 (97.76%), Query Frame = 0


Query: 1   MGRLFVVSLEGRIYSCKHCRTHLALYEDIVSKSFQSRHGKAYLFNKVVNVTVGVKETRMM 60
           MGRLFVV+LEGRIYSCKHCRTHLALYEDIVSKSFQSRHGKAYLFNKVVNV+VGVKETRMM
Sbjct: 1   MGRLFVVNLEGRIYSCKHCRTHLALYEDIVSKSFQSRHGKAYLFNKVVNVSVGVKETRMM 60

Query: 61  MTGMHTVADIFCVGCGSIVGWTYETAFEKNQKYKEGKSVLERFKVSGPGGTSYWVSHAHS 120
           MTGMHTVADIFCVGCGSIVGWTYETAFEKNQKYKEGKSVLERFKVSGPGGTSYWVSH HS
Sbjct: 61  MTGMHTVADIFCVGCGSIVGWTYETAFEKNQKYKEGKSVLERFKVSGPGGTSYWVSHTHS 120

Query: 121 HEAAHVGGSDADEA 135
           HE AH GGSDADEA
Sbjct: 121 HETAHGGGSDADEA 134

[Close]

BLAST of Tan0002972 vs. ExPASy TrEMBL
Match: A0A6J1JRQ1 (Protein yippee-like OS=Cucurbita maxima OX=3661 GN=LOC111486961 PE=3 SV=1)

HSP 1 Score: 268.9 bits (686), Expect = 1.2e-68
Identity = 130/134 (97.01%), Postives = 130/134 (97.01%), Query Frame = 0


Query: 1   MGRLFVVSLEGRIYSCKHCRTHLALYEDIVSKSFQSRHGKAYLFNKVVNVTVGVKETRMM 60
           MGRLFVVSLEGRIYSCKHCRTHLALYEDIVSKSFQ RHGKAYLFNKVVNVTVGVKETRMM
Sbjct: 1   MGRLFVVSLEGRIYSCKHCRTHLALYEDIVSKSFQCRHGKAYLFNKVVNVTVGVKETRMM 60

Query: 61  MTGMHTVADIFCVGCGSIVGWTYETAFEKNQKYKEGKSVLERFKVSGPGGTSYWVSHAHS 120
           MTGMHTVADIFCVGCGSIVGWTYETAFEKNQKYKEGKSVLERFKVSGPGGTSYWVSHA S
Sbjct: 61  MTGMHTVADIFCVGCGSIVGWTYETAFEKNQKYKEGKSVLERFKVSGPGGTSYWVSHARS 120

Query: 121 HEAAHVGGSDADEA 135
           HE AH GGSDADEA
Sbjct: 121 HEVAHGGGSDADEA 134

[Close]

BLAST of Tan0002972 vs. ExPASy TrEMBL
Match: A0A6J1E6I1 (Protein yippee-like OS=Cucurbita moschata OX=3662 GN=LOC111431212 PE=3 SV=1)

HSP 1 Score: 268.9 bits (686), Expect = 1.2e-68
Identity = 130/134 (97.01%), Postives = 130/134 (97.01%), Query Frame = 0


Query: 1   MGRLFVVSLEGRIYSCKHCRTHLALYEDIVSKSFQSRHGKAYLFNKVVNVTVGVKETRMM 60
           MGRLFVVSLEGRIYSCKHCRTHLALYEDIVSKSFQ RHGKAYLFNKVVNVTVGVKETRMM
Sbjct: 1   MGRLFVVSLEGRIYSCKHCRTHLALYEDIVSKSFQCRHGKAYLFNKVVNVTVGVKETRMM 60

Query: 61  MTGMHTVADIFCVGCGSIVGWTYETAFEKNQKYKEGKSVLERFKVSGPGGTSYWVSHAHS 120
           MTGMHTVADIFCVGCGSIVGWTYETAFEKNQKYKEGKSVLERFKVSGPGGTSYWVSHA S
Sbjct: 61  MTGMHTVADIFCVGCGSIVGWTYETAFEKNQKYKEGKSVLERFKVSGPGGTSYWVSHARS 120

Query: 121 HEAAHVGGSDADEA 135
           HE AH GGSDADEA
Sbjct: 121 HEVAHGGGSDADEA 134

[Close]

BLAST of Tan0002972 vs. ExPASy TrEMBL
Match: A0A1S3B3I1 (Protein yippee-like OS=Cucumis melo OX=3656 GN=LOC103485564 PE=3 SV=1)

HSP 1 Score: 266.9 bits (681), Expect = 4.5e-68
Identity = 127/134 (94.78%), Postives = 130/134 (97.01%), Query Frame = 0


Query: 1   MGRLFVVSLEGRIYSCKHCRTHLALYEDIVSKSFQSRHGKAYLFNKVVNVTVGVKETRMM 60
           MGRLFVV+LEGRIYSCKHCRTHLALYEDIVSK+FQSRHGKAYLFNKVVNV+VGVKETRMM
Sbjct: 1   MGRLFVVNLEGRIYSCKHCRTHLALYEDIVSKTFQSRHGKAYLFNKVVNVSVGVKETRMM 60

Query: 61  MTGMHTVADIFCVGCGSIVGWTYETAFEKNQKYKEGKSVLERFKVSGPGGTSYWVSHAHS 120
           MTGMHTVADIFCVGCGSIVGWTYETAFEKNQKYKEGKSVLERFKVSGPGGTSYWVSH HS
Sbjct: 61  MTGMHTVADIFCVGCGSIVGWTYETAFEKNQKYKEGKSVLERFKVSGPGGTSYWVSHTHS 120

Query: 121 HEAAHVGGSDADEA 135
           HE  H GGSDADEA
Sbjct: 121 HETGHGGGSDADEA 134

[Close]

BLAST of Tan0002972 vs. ExPASy TrEMBL
Match: A0A6J1JR81 (Protein yippee-like OS=Cucurbita maxima OX=3661 GN=LOC111489098 PE=3 SV=1)

HSP 1 Score: 261.2 bits (666), Expect = 2.5e-66
Identity = 124/133 (93.23%), Postives = 129/133 (96.99%), Query Frame = 0


Query: 1   MGRLFVVSLEGRIYSCKHCRTHLALYEDIVSKSFQSRHGKAYLFNKVVNVTVGVKETRMM 60
           MGRLFVV+LEGRIYSCKHCRTHLALYEDIVSKSFQSRHGKAYLF+KVVNV++GVKETRMM
Sbjct: 1   MGRLFVVNLEGRIYSCKHCRTHLALYEDIVSKSFQSRHGKAYLFSKVVNVSIGVKETRMM 60

Query: 61  MTGMHTVADIFCVGCGSIVGWTYETAFEKNQKYKEGKSVLERFKVSGPGGTSYWVSHAHS 120
           MTGMHTVADIFCVGCGSIVGWTYETAFEK+QKYKEGKSVLER KVSGPGGTSYWVSHAH 
Sbjct: 61  MTGMHTVADIFCVGCGSIVGWTYETAFEKSQKYKEGKSVLERSKVSGPGGTSYWVSHAHG 120

Query: 121 HEAAHVGGSDADE 134
           HE AH GGSDADE
Sbjct: 121 HETAHGGGSDADE 133

[Close]

BLAST of Tan0002972 vs. TAIR 10
Match: AT2G40110.1 (Yippee family putative zinc-binding protein )

HSP 1 Score: 216.5 bits (550), Expect = 1.3e-56
Identity = 103/134 (76.87%), Postives = 116/134 (86.57%), Query Frame = 0


Query: 1   MGRLFVVSLEGRIYSCKHCRTHLALYEDIVSKSFQSRHGKAYLFNKVVNVTVGVKETRMM 60
           MGRLFVV+LEG+IYSCKHC+THLA YEDI+SKSF  +HGKAYLFNKV NV++G  E R+M
Sbjct: 1   MGRLFVVNLEGKIYSCKHCKTHLATYEDIISKSFHCKHGKAYLFNKVANVSIGETEERLM 60

Query: 61  MTGMHTVADIFCVGCGSIVGWTYETAFEKNQKYKEGKSVLERFKVSGPGGTSYWVSHAHS 120
           MTG HTVADIFCV CGSIVGW YETA EKNQKYKEGKSVLERFK+SGP G++YWVS   S
Sbjct: 61  MTGKHTVADIFCVSCGSIVGWKYETAHEKNQKYKEGKSVLERFKISGPDGSNYWVS---S 120

Query: 121 HEAAHVGGSDADEA 135
           H   H+GGSDAD+A
Sbjct: 121 H-GRHIGGSDADDA 130

[Close]

BLAST of Tan0002972 vs. TAIR 10
Match: AT3G11230.1 (Yippee family putative zinc-binding protein )

HSP 1 Score: 197.2 bits (500), Expect = 8.4e-51
Identity = 95/134 (70.90%), Postives = 109/134 (81.34%), Query Frame = 0


Query: 1   MGRLFVVSLEGRIYSCKHCRTHLALYEDIVSKSFQSRHGKAYLFNKVVNVTVGVKETRMM 60
           MGRLF+V+LEG+ YSCKHC+T+LAL +D+VSKSFQSRHGKAYLF+KVVNV  G KE RMM
Sbjct: 1   MGRLFLVNLEGKSYSCKHCKTNLALCDDVVSKSFQSRHGKAYLFSKVVNVYAGKKEDRMM 60

Query: 61  MTGMHTVADIFCVGCGSIVGWTYETAFEKNQKYKEGKSVLERFKVSGPGGTSYWVSHAHS 120
           MTGMHTV DI+CV CGS VGW YE AFEKNQKYKEGKSVLER+KV GP G +YWV+    
Sbjct: 61  MTGMHTVVDIYCVKCGSYVGWKYEFAFEKNQKYKEGKSVLERYKVWGPDGNNYWVA---- 120

Query: 121 HEAAHVGGSDADEA 135
            +    G SD D+A
Sbjct: 121 -QEVEAGDSDTDDA 129

[Close]

BLAST of Tan0002972 vs. TAIR 10
Match: AT3G11230.2 (Yippee family putative zinc-binding protein )

HSP 1 Score: 197.2 bits (500), Expect = 8.4e-51
Identity = 95/134 (70.90%), Postives = 109/134 (81.34%), Query Frame = 0


Query: 1   MGRLFVVSLEGRIYSCKHCRTHLALYEDIVSKSFQSRHGKAYLFNKVVNVTVGVKETRMM 60
           MGRLF+V+LEG+ YSCKHC+T+LAL +D+VSKSFQSRHGKAYLF+KVVNV  G KE RMM
Sbjct: 34  MGRLFLVNLEGKSYSCKHCKTNLALCDDVVSKSFQSRHGKAYLFSKVVNVYAGKKEDRMM 93

Query: 61  MTGMHTVADIFCVGCGSIVGWTYETAFEKNQKYKEGKSVLERFKVSGPGGTSYWVSHAHS 120
           MTGMHTV DI+CV CGS VGW YE AFEKNQKYKEGKSVLER+KV GP G +YWV+    
Sbjct: 94  MTGMHTVVDIYCVKCGSYVGWKYEFAFEKNQKYKEGKSVLERYKVWGPDGNNYWVA---- 153

Query: 121 HEAAHVGGSDADEA 135
            +    G SD D+A
Sbjct: 154 -QEVEAGDSDTDDA 162

[Close]

BLAST of Tan0002972 vs. TAIR 10
Match: AT2G40110.2 (Yippee family putative zinc-binding protein )

HSP 1 Score: 183.3 bits (464), Expect = 1.2e-46
Identity = 84/103 (81.55%), Postives = 92/103 (89.32%), Query Frame = 0


Query: 1   MGRLFVVSLEGRIYSCKHCRTHLALYEDIVSKSFQSRHGKAYLFNKVVNVTVGVKETRMM 60
           MGRLFVV+LEG+IYSCKHC+THLA YEDI+SKSF  +HGKAYLFNKV NV++G  E R+M
Sbjct: 1   MGRLFVVNLEGKIYSCKHCKTHLATYEDIISKSFHCKHGKAYLFNKVANVSIGETEERLM 60

Query: 61  MTGMHTVADIFCVGCGSIVGWTYETAFEKNQKYKEGKSVLERF 104
           MTG HTVADIFCV CGSIVGW YETA EKNQKYKEGKSVLERF
Sbjct: 61  MTGKHTVADIFCVSCGSIVGWKYETAHEKNQKYKEGKSVLERF 103

[Close]

BLAST of Tan0002972 vs. TAIR 10
Match: AT3G08990.1 (Yippee family putative zinc-binding protein )

HSP 1 Score: 173.3 bits (438), Expect = 1.3e-43
Identity = 78/113 (69.03%), Postives = 94/113 (83.19%), Query Frame = 0


Query: 1   MGRLFVVSLEGRIYSCKHCRTHLALYEDIVSKSFQSRHGKAYLFNKVVNVTVGVKETRMM 60
           MGRLFV+ LEG +YSCK+C+TH A+  DI+SKSF  +HG+AYLF+ VVNVTVG KE R+M
Sbjct: 1   MGRLFVIDLEGLVYSCKYCQTHFAVTNDIISKSFHCKHGRAYLFDNVVNVTVGEKEHRVM 60

Query: 61  MTGMHTVADIFCVGCGSIVGWTYETAFEKNQKYKEGKSVLERFKVSGPGGTSY 114
           +TG HTVADIFCV CGS+VGW YE A++K+QKYKEGK +LERFKV GP G  Y
Sbjct: 61  ITGWHTVADIFCVSCGSLVGWKYEIAYDKSQKYKEGKFILERFKVLGPYGGGY 113

The following BLAST results are available for this feature:

BLAST of Tan0002972 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P59234	4.3e-52	75.19	Protein yippee-like OS=Solanum tuberosum OX=4113 PE=2 SV=1	[more]
Q9C777	1.2e-49	70.90	Protein yippee-like At3g11230 OS=Arabidopsis thaliana OX=3702 GN=At3g11230 PE=2 ...	[more]
Q9SR97	1.8e-42	69.03	Protein yippee-like At3g08990 OS=Arabidopsis thaliana OX=3702 GN=At3g08990 PE=2 ...	[more]
Q9LY56	5.0e-40	67.24	Protein yippee-like At3g55890 OS=Arabidopsis thaliana OX=3702 GN=At3g55890 PE=2 ...	[more]
Q9FN32	8.2e-35	64.76	Protein yippee-like At5g53940 OS=Arabidopsis thaliana OX=3702 GN=At5g53940 PE=2 ...	[more]

BLAST of Tan0002972 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038884693.1	4.9e-69	97.01	protein yippee-like [Benincasa hispida] >XP_038884694.1 protein yippee-like [Ben...	[more]
XP_004138427.1	1.4e-68	96.27	protein yippee-like [Cucumis sativus] >XP_031742575.1 protein yippee-like [Cucum...	[more]
XP_022923565.1	2.4e-68	97.01	protein yippee-like [Cucurbita moschata] >XP_022923574.1 protein yippee-like [Cu...	[more]
KAG6602621.1	2.4e-68	97.01	putative zinc metalloprotease EGY2, chloroplastic, partial [Cucurbita argyrosper...	[more]
XP_008441452.1	9.2e-68	94.78	PREDICTED: protein yippee-like [Cucumis melo]	[more]

BLAST of Tan0002972 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KBL4	6.9e-69	96.27	Protein yippee-like OS=Cucumis sativus OX=3659 GN=Csa_6G011570 PE=3 SV=1	[more]
A0A6J1JRQ1	1.2e-68	97.01	Protein yippee-like OS=Cucurbita maxima OX=3661 GN=LOC111486961 PE=3 SV=1	[more]
A0A6J1E6I1	1.2e-68	97.01	Protein yippee-like OS=Cucurbita moschata OX=3662 GN=LOC111431212 PE=3 SV=1	[more]
A0A1S3B3I1	4.5e-68	94.78	Protein yippee-like OS=Cucumis melo OX=3656 GN=LOC103485564 PE=3 SV=1	[more]
A0A6J1JR81	2.5e-66	93.23	Protein yippee-like OS=Cucurbita maxima OX=3661 GN=LOC111489098 PE=3 SV=1	[more]

BLAST of Tan0002972 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G40110.1	1.3e-56	76.87	Yippee family putative zinc-binding protein	[more]
AT3G11230.1	8.4e-51	70.90	Yippee family putative zinc-binding protein	[more]
AT3G11230.2	8.4e-51	70.90	Yippee family putative zinc-binding protein	[more]
AT2G40110.2	1.2e-46	81.55	Yippee family putative zinc-binding protein	[more]
AT3G08990.1	1.3e-43	69.03	Yippee family putative zinc-binding protein	[more]

InterPro

Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR004910	Yippee/Mis18/Cereblon	PFAM	PF03226	Yippee-Mis18	coord: 13..102 e-value: 9.3E-15 score: 54.7
None	No IPR available	PANTHER	PTHR13848:SF67	PROTEIN YIPPEE-LIKE	coord: 1..103
IPR039058	Yippee family	PANTHER	PTHR13848	PROTEIN YIPPEE-LIKE CG15309-RELATED	coord: 1..103
IPR034751	Yippee domain	PROSITE	PS51792	YIPPEE	coord: 12..109 score: 48.053303

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Tan0002972.1	Tan0002972.1	mRNA
Tan0002972.2	Tan0002972.2	mRNA
Tan0002972.3	Tan0002972.3	mRNA
Tan0002972.4	Tan0002972.4	mRNA
Tan0002972.5	Tan0002972.5	mRNA
Tan0002972.6	Tan0002972.6	mRNA
Tan0002972.7	Tan0002972.7	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009765	photosynthesis, light harvesting
biological_process	GO:0018298	protein-chromophore linkage
cellular_component	GO:0009535	chloroplast thylakoid membrane
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0009522	photosystem I
cellular_component	GO:0009523	photosystem II
cellular_component	GO:0000151	ubiquitin ligase complex
molecular_function	GO:0016168	chlorophyll binding
molecular_function	GO:0046872	metal ion binding