Spg021956.1 (mRNA) Sponge gourd (cylindrica) v1

Overview


Name	Spg021956.1
Type	mRNA
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	Unknown protein
Location	scaffold2: 6900433 .. 6900814 (-)
Sequence length	222
RNA-Seq Expression	Spg021956.1
Synteny	Spg021956.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTTAATAACAGAAAGTTTCAACATGGCTCAAAGAATAAAACACTTATTACCGTCCATTTGAACTTATCGGCAAAAGTTGCAATGCACAGAGCATGCATTATGTTATCTCGTAATCATATATATATGTCTCTGTTTGTTCATGCCGCCGGAGCAAAGTCATGATCTGCAACTATGCTTCCTCCGCCGCCGCCGCCGCCGACGCCGGCGGGCGGAGGAAAGAGCGGAGGCGGAGGTGGGTCGAGGTAGTTCTTGCCGCCATTGCCAGGATCTGCATGGTGGTTGTTGCAATTGGAGTCAATGGGCTTGGAAATCGGAACCATTGTTATTTTGTTATGAGCAGAAACAGAGACGAAAAGGCTTTAGCTGCGAAGGACAATTAA

mRNA sequence

ATGATCTGCAACTATGCTTCCTCCGCCGCCGCCGCCGCCGACGCCGGCGGGCGGAGGAAAGAGCGGAGGCGGAGGTGGGTCGAGGTAGTTCTTGCCGCCATTGCCAGGATCTGCATGGTGGTTGTTGCAATTGGAGTCAATGGGCTTGGAAATCGGAACCATTGTTATTTTGTTATGAGCAGAAACAGAGACGAAAAGGCTTTAGCTGCGAAGGACAATTAA

Coding sequence (CDS)

ATGATCTGCAACTATGCTTCCTCCGCCGCCGCCGCCGCCGACGCCGGCGGGCGGAGGAAAGAGCGGAGGCGGAGGTGGGTCGAGGTAGTTCTTGCCGCCATTGCCAGGATCTGCATGGTGGTTGTTGCAATTGGAGTCAATGGGCTTGGAAATCGGAACCATTGTTATTTTGTTATGAGCAGAAACAGAGACGAAAAGGCTTTAGCTGCGAAGGACAATTAA

Protein sequence

MICNYASSAAAAADAGGRRKERRRRWVEVVLAAIARICMVVVAIGVNGLGNRNHCYFVMSRNRDEKALAAKDN

Homology

The following BLAST results are available for this feature:

BLAST of Spg021956.1 vs.


Match Name	E-value	Identity	Description

BLAST of Spg021956.1 vs.


Match Name	E-value	Identity	Description

BLAST of Spg021956.1 vs.


Match Name	E-value	Identity	Description

BLAST of Spg021956.1 vs.


Match Name	E-value	Identity	Description

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Spg021956	Spg021956	gene

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spg021956.1-cds	Spg021956.1-cds-scaffold2:6900433..6900654	CDS

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spg021956.1-five_prime_utr	Spg021956.1-five_prime_utr-scaffold2:6900655..6900814	five_prime_UTR

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Spg021956.1	Spg021956.1-protein	polypeptide