Spg001103.1 (mRNA) Sponge gourd (cylindrica) v1
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Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGTACGCCCCACAGCTGGATTTTATTTCGTCATATGGACTTCTCAGTCTGCTGCTGTGGGTATGAAATTGACAATTCTTCAGCCAGCTGCTTCTGGGCTGTTGGAATTGAACCTTCTTCAGCAAATAAGTGAACCTCTTTCGAGAATGCTTCCCCAGTTGTTGGGATGTTTATCTATAGTTGGACGTAAGTTTGGATCGTTAGAGTGGATCAAGAGTTTGTGGAAGTGCTCGGCTCTTTTGGCAGAAATATCACGTGAACATTTTTCCACCCTTTTTCCGCTTGCGAGTGATATCCTATTCCAAAGTTTGAAAACGACCAGAGCTAACCATGTAGTAAGACGTCAGAAGATTACGTTTCTTCAAGTTCATGGCGTTTAAAAAACTAATCTTCAGTTATTATCCCTTCAAAAACTTGGACTGCTGCCATCATCTGTGCACAGGATATTGAAATTTGATGCACCAATATCTCAGCTTAGACAGCATCCAAATCATTTGGTAACAGGAAAGTTCTGCTGCCACTTATTAACTCTTGCTCCAACATGGGAATAATGAAGTTGAACAAACAGTGACAATTATTGAAGCAATCTTGACAGTCTTTATGCTTGATATCTTGCACGAACTTACTTTGTTACTGACAGAGAAATTAGCATTGCTGAGCAAGTGGATTATCTACTTAAGCAAGCAACTAGTGTAGACAACCTGCGCAACATGTATAAAGGTTGGACTCCATGATGGACTGGAAATTTGAAGACCAAGGAATCTTGGATGCCTATACTGATGGTTAACTGTTCTTCAAGATTTAGACTGGCACCAGTTGCATTCATCAAAGACATGCTGGGATAATGTGAGAAGCTACAATGAATGCTCGAAAAGCTGAATGGTACGCCCCACAGCTGGATTTTATTTCGTCATATGGACTTCTCAGTCTGCTGCTGTGGGTATGAAATTGACAATTCTTCAGCCAGCTGCTTCTGGGCTGTTGGAATTGAACCTTCTTCAGCAAATAAGTGAACCTCTTTCGAGAATGCTTCCCCAGTTGTTGGGATGTTTATCTATAGTTGGACGTAAGTTTGGATCGTTAGAGTGGATCAAGAGTTTGTGGAAGTGCTCGGCTCTTTTGGCAGAAATATCACGTGAACATTTTTCCACCCTTTTTCCGCTTGCGAAAATTAGCATTGCTGAGCAAGTGGATTATCTACTTAAGCAAGCAACTAGTGTAGACAACCTGCGCAACATGTATAAAGACTGGCACCAGTTGCATTCATCAAAGACATGCTGGGATAATGTGAGAAGCTACAATGAATGCTCGAAAAGCTGA ATGGTACGCCCCACAGCTGGATTTTATTTCGTCATATGGACTTCTCAGTCTGCTGCTGTGGGTATGAAATTGACAATTCTTCAGCCAGCTGCTTCTGGGCTGTTGGAATTGAACCTTCTTCAGCAAATAAGTGAACCTCTTTCGAGAATGCTTCCCCAGTTGTTGGGATGTTTATCTATAGTTGGACGTAAGTTTGGATCGTTAGAGTGGATCAAGAGTTTGTGGAAGTGCTCGGCTCTTTTGGCAGAAATATCACGTGAACATTTTTCCACCCTTTTTCCGCTTGCGAAAATTAGCATTGCTGAGCAAGTGGATTATCTACTTAAGCAAGCAACTAGTGTAGACAACCTGCGCAACATGTATAAAGACTGGCACCAGTTGCATTCATCAAAGACATGCTGGGATAATGTGAGAAGCTACAATGAATGCTCGAAAAGCTGA MVRPTAGFYFVIWTSQSAAVGMKLTILQPAASGLLELNLLQQISEPLSRMLPQLLGCLSIVGRKFGSLEWIKSLWKCSALLAEISREHFSTLFPLAKISIAEQVDYLLKQATSVDNLRNMYKDWHQLHSSKTCWDNVRSYNECSKS Homology
BLAST of Spg001103.1 vs. NCBI nr
Match: XP_038901831.1 (serine/threonine-protein kinase SMG1-like isoform X2 [Benincasa hispida]) HSP 1 Score: 119.8 bits (299), Expect = 2.0e-23 Identity = 59/72 (81.94%), Postives = 65/72 (90.28%), Query Frame = 0
BLAST of Spg001103.1 vs. NCBI nr
Match: XP_038901832.1 (serine/threonine-protein kinase SMG1-like isoform X3 [Benincasa hispida]) HSP 1 Score: 119.8 bits (299), Expect = 2.0e-23 Identity = 59/72 (81.94%), Postives = 65/72 (90.28%), Query Frame = 0
BLAST of Spg001103.1 vs. NCBI nr
Match: XP_038901829.1 (serine/threonine-protein kinase SMG1-like isoform X1 [Benincasa hispida]) HSP 1 Score: 119.8 bits (299), Expect = 2.0e-23 Identity = 59/72 (81.94%), Postives = 65/72 (90.28%), Query Frame = 0
BLAST of Spg001103.1 vs. NCBI nr
Match: XP_008459237.1 (PREDICTED: serine/threonine-protein kinase SMG1-like [Cucumis melo]) HSP 1 Score: 117.1 bits (292), Expect = 1.3e-22 Identity = 59/72 (81.94%), Postives = 64/72 (88.89%), Query Frame = 0
BLAST of Spg001103.1 vs. NCBI nr
Match: KAA0045985.1 (serine/threonine-protein kinase SMG1-like [Cucumis melo var. makuwa] >TYK13599.1 serine/threonine-protein kinase SMG1-like [Cucumis melo var. makuwa]) HSP 1 Score: 117.1 bits (292), Expect = 1.3e-22 Identity = 59/72 (81.94%), Postives = 64/72 (88.89%), Query Frame = 0
BLAST of Spg001103.1 vs. ExPASy TrEMBL
Match: A0A5A7TX52 (Non-specific serine/threonine protein kinase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold299G00960 PE=3 SV=1) HSP 1 Score: 117.1 bits (292), Expect = 6.2e-23 Identity = 59/72 (81.94%), Postives = 64/72 (88.89%), Query Frame = 0
BLAST of Spg001103.1 vs. ExPASy TrEMBL
Match: A0A0A0LLV1 (Non-specific serine/threonine protein kinase OS=Cucumis sativus OX=3659 GN=Csa_2G237710 PE=3 SV=1) HSP 1 Score: 117.1 bits (292), Expect = 6.2e-23 Identity = 59/72 (81.94%), Postives = 64/72 (88.89%), Query Frame = 0
BLAST of Spg001103.1 vs. ExPASy TrEMBL
Match: A0A0A0LLV1 (Non-specific serine/threonine protein kinase OS=Cucumis sativus OX=3659 GN=Csa_2G237710 PE=3 SV=1) HSP 1 Score: 50.1 bits (118), Expect = 9.4e-03 Identity = 23/28 (82.14%), Postives = 26/28 (92.86%), Query Frame = 0
HSP 2 Score: 117.1 bits (292), Expect = 6.2e-23 Identity = 59/72 (81.94%), Postives = 64/72 (88.89%), Query Frame = 0
BLAST of Spg001103.1 vs. ExPASy TrEMBL
Match: A0A1S3CA93 (Non-specific serine/threonine protein kinase OS=Cucumis melo OX=3656 GN=LOC103498422 PE=3 SV=1) HSP 1 Score: 48.5 bits (114), Expect = 2.7e-02 Identity = 22/28 (78.57%), Postives = 25/28 (89.29%), Query Frame = 0
HSP 2 Score: 114.0 bits (284), Expect = 5.3e-22 Identity = 56/72 (77.78%), Postives = 63/72 (87.50%), Query Frame = 0
BLAST of Spg001103.1 vs. ExPASy TrEMBL
Match: A0A6J1D4B0 (Non-specific serine/threonine protein kinase OS=Momordica charantia OX=3673 GN=LOC111017174 PE=3 SV=1) HSP 1 Score: 50.1 bits (118), Expect = 9.4e-03 Identity = 23/28 (82.14%), Postives = 26/28 (92.86%), Query Frame = 0
HSP 2 Score: 113.6 bits (283), Expect = 6.9e-22 Identity = 57/72 (79.17%), Postives = 63/72 (87.50%), Query Frame = 0
The following BLAST results are available for this feature:
Pages
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01 Position : 0 Zoom : x 1
Relationships
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
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