Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGATTTGAGTTCTTGGAGCTGCTCCGGCGGCCATGGGTACTTGAAAAGAGGGTACTATACGTCTGTGCCGGTGGCTGTTTTGGCCTGCAGATCATCGGAGAAGACGACGGCGAGATGGAGAGTGCTGTGGAGGAGGCTGAAGAAGGAGAAGAAGAGAATCTTCAGCTTCAGCTGCGCTTCGACTCGGCCTCAGGTTCATGTGCCTTACGATCCCCAGACGTACTTGCAGAACTTTGATCAGGGGTCGTCGATGATGGCGGCGGCGGATCCCGACGCCATTTCTCGCTCTTTCTCGGCTCGCTTCGCCATTTCTTCAAACATTACTTTTCAGAAGGCTGATGAGTTTGTGGTAGAGAAAGTAGCAACTCGTTGA
mRNA sequence
ATGGATTTGAGTTCTTGGAGCTGCTCCGGCGGCCATGGGTACTTGAAAAGAGGGTACTATACGTCTGTGCCGGTGGCTGTTTTGGCCTGCAGATCATCGGAGAAGACGACGGCGAGATGGAGAGTGCTGTGGAGGAGGCTGAAGAAGGAGAAGAAGAGAATCTTCAGCTTCAGCTGCGCTTCGACTCGGCCTCAGGTTCATGTGCCTTACGATCCCCAGACGTACTTGCAGAACTTTGATCAGGGGTCGTCGATGATGGCGGCGGCGGATCCCGACGCCATTTCTCGCTCTTTCTCGGCTCGCTTCGCCATTTCTTCAAACATTACTTTTCAGAAGGCTGATGAGTTTGTGGTAGAGAAAGTAGCAACTCGTTGA
Coding sequence (CDS)
ATGGATTTGAGTTCTTGGAGCTGCTCCGGCGGCCATGGGTACTTGAAAAGAGGGTACTATACGTCTGTGCCGGTGGCTGTTTTGGCCTGCAGATCATCGGAGAAGACGACGGCGAGATGGAGAGTGCTGTGGAGGAGGCTGAAGAAGGAGAAGAAGAGAATCTTCAGCTTCAGCTGCGCTTCGACTCGGCCTCAGGTTCATGTGCCTTACGATCCCCAGACGTACTTGCAGAACTTTGATCAGGGGTCGTCGATGATGGCGGCGGCGGATCCCGACGCCATTTCTCGCTCTTTCTCGGCTCGCTTCGCCATTTCTTCAAACATTACTTTTCAGAAGGCTGATGAGTTTGTGGTAGAGAAAGTAGCAACTCGTTGA
Protein sequence
MDLSSWSCSGGHGYLKRGYYTSVPVAVLACRSSEKTTARWRVLWRRLKKEKKRIFSFSCASTRPQVHVPYDPQTYLQNFDQGSSMMAAADPDAISRSFSARFAISSNITFQKADEFVVEKVATR
Homology
BLAST of Sgr016225.1 vs. NCBI nr
Match:
KAG7036482.1 (hypothetical protein SDJN02_00099, partial [Cucurbita argyrosperma subsp. argyrosperma])
HSP 1 Score: 132.9 bits (333), Expect = 1.9e-27
Identity = 74/113 (65.49%), Postives = 86/113 (76.11%), Query Frame = 0
Query: 10 GGHGYLKRGYYTSVPVAVLACRSSEKTTARWRVLWRRLKKEKKRIFSFSCASTRPQVHVP 69
GG GY++RGYY++V VAVL EKTTARWRV+WRRLKKEKKR+F + R +VHVP
Sbjct: 11 GGIGYVERGYYSAVTVAVL-----EKTTARWRVVWRRLKKEKKRMFRCGMSGAR-EVHVP 70
Query: 70 YDPQTYLQNFDQGSSMMAA-ADPDAISRSFSARFAISSNITFQKADEFVVEKV 122
Y+P+TYLQNFD GS MM DPDAISRSFSARFAISS I + EFVV K+
Sbjct: 71 YNPKTYLQNFDDGSVMMVGDDDPDAISRSFSARFAISSAILRRPPPEFVVLKL 117
BLAST of Sgr016225.1 vs. NCBI nr
Match:
KAG6606769.1 (hypothetical protein SDJN03_00111, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 131.7 bits (330), Expect = 4.3e-27
Identity = 73/113 (64.60%), Postives = 86/113 (76.11%), Query Frame = 0
Query: 10 GGHGYLKRGYYTSVPVAVLACRSSEKTTARWRVLWRRLKKEKKRIFSFSCASTRPQVHVP 69
GG GY++RGYY++V VAVL EKTT+RWRV+WRRLKKEKKR+F + R +VHVP
Sbjct: 11 GGIGYVERGYYSAVTVAVL-----EKTTSRWRVVWRRLKKEKKRMFRCGMSGAR-EVHVP 70
Query: 70 YDPQTYLQNFDQGSSMMAA-ADPDAISRSFSARFAISSNITFQKADEFVVEKV 122
Y+P+TYLQNFD GS MM DPDAISRSFSARFAISS I + EFVV K+
Sbjct: 71 YNPKTYLQNFDDGSVMMVGDDDPDAISRSFSARFAISSAILRRPPPEFVVLKL 117
BLAST of Sgr016225.1 vs. NCBI nr
Match:
KDO51221.1 (hypothetical protein CISIN_1g044132mg [Citrus sinensis])
HSP 1 Score: 100.5 bits (249), Expect = 1.1e-17
Identity = 61/120 (50.83%), Postives = 73/120 (60.83%), Query Frame = 0
Query: 1 MDLSSWSCSGG------HGYLKRGYYTSVPVAVLACRSSEKTTARWRVLWRRLKKEKKRI 60
MDL+ W SG Y+KRGY + L S T RWR+LWR++K+EKKRI
Sbjct: 42 MDLNGWCNSGNQNMCCCQSYVKRGYDRVLSFNGLITGSK---TPRWRLLWRKIKREKKRI 101
Query: 61 FSFSCASTRPQVHVPYDPQTYLQNFDQGSSMMAAADPDAISRSFSARFAISSNITFQKAD 115
F C+S VHVPYDP TY QNFDQG ADPD SRSFSARFA+ S + FQK++
Sbjct: 102 --FDCSSGSTNVHVPYDPCTYSQNFDQG---YVWADPDNASRSFSARFAVPSRV-FQKSE 152
BLAST of Sgr016225.1 vs. NCBI nr
Match:
GAY51209.1 (hypothetical protein CUMW_132530 [Citrus unshiu])
HSP 1 Score: 99.8 bits (247), Expect = 1.8e-17
Identity = 60/120 (50.00%), Postives = 73/120 (60.83%), Query Frame = 0
Query: 1 MDLSSWSCSGG------HGYLKRGYYTSVPVAVLACRSSEKTTARWRVLWRRLKKEKKRI 60
MDL+ W SG Y+KRGY + L S T RWR+LWR++K++KKRI
Sbjct: 42 MDLNGWCNSGNQNMCCCQSYVKRGYDRVLSFNGLITGSK---TPRWRLLWRKIKRDKKRI 101
Query: 61 FSFSCASTRPQVHVPYDPQTYLQNFDQGSSMMAAADPDAISRSFSARFAISSNITFQKAD 115
F C+S VHVPYDP TY QNFDQG ADPD SRSFSARFA+ S + FQK++
Sbjct: 102 --FDCSSGGTDVHVPYDPYTYSQNFDQG---YVWADPDNASRSFSARFAVPSRV-FQKSE 152
BLAST of Sgr016225.1 vs. NCBI nr
Match:
ESR40256.1 (hypothetical protein CICLE_v10026796mg [Citrus clementina])
HSP 1 Score: 98.6 bits (244), Expect = 4.0e-17
Identity = 59/120 (49.17%), Postives = 73/120 (60.83%), Query Frame = 0
Query: 1 MDLSSWSCSGG------HGYLKRGYYTSVPVAVLACRSSEKTTARWRVLWRRLKKEKKRI 60
MDL+ W SG Y++RGY + L S T RWR+LWR++K+EK+RI
Sbjct: 1 MDLNGWCNSGNQNMCCCQSYVRRGYDRVLSFNGLITGSK---TPRWRLLWRKIKREKERI 60
Query: 61 FSFSCASTRPQVHVPYDPQTYLQNFDQGSSMMAAADPDAISRSFSARFAISSNITFQKAD 115
F C+S VHVPYDP TY QNFDQG ADPD SRSFSARFA+ S + FQK++
Sbjct: 61 --FDCSSGSTNVHVPYDPYTYSQNFDQG---YVWADPDNASRSFSARFAVPSRV-FQKSE 111
BLAST of Sgr016225.1 vs. ExPASy TrEMBL
Match:
A0A067EJZ4 (Uncharacterized protein OS=Citrus sinensis OX=2711 GN=CISIN_1g044132mg PE=4 SV=1)
HSP 1 Score: 100.5 bits (249), Expect = 5.1e-18
Identity = 61/120 (50.83%), Postives = 73/120 (60.83%), Query Frame = 0
Query: 1 MDLSSWSCSGG------HGYLKRGYYTSVPVAVLACRSSEKTTARWRVLWRRLKKEKKRI 60
MDL+ W SG Y+KRGY + L S T RWR+LWR++K+EKKRI
Sbjct: 42 MDLNGWCNSGNQNMCCCQSYVKRGYDRVLSFNGLITGSK---TPRWRLLWRKIKREKKRI 101
Query: 61 FSFSCASTRPQVHVPYDPQTYLQNFDQGSSMMAAADPDAISRSFSARFAISSNITFQKAD 115
F C+S VHVPYDP TY QNFDQG ADPD SRSFSARFA+ S + FQK++
Sbjct: 102 --FDCSSGSTNVHVPYDPCTYSQNFDQG---YVWADPDNASRSFSARFAVPSRV-FQKSE 152
BLAST of Sgr016225.1 vs. ExPASy TrEMBL
Match:
A0A2H5PFR9 (Uncharacterized protein OS=Citrus unshiu OX=55188 GN=CUMW_132530 PE=4 SV=1)
HSP 1 Score: 99.8 bits (247), Expect = 8.7e-18
Identity = 60/120 (50.00%), Postives = 73/120 (60.83%), Query Frame = 0
Query: 1 MDLSSWSCSGG------HGYLKRGYYTSVPVAVLACRSSEKTTARWRVLWRRLKKEKKRI 60
MDL+ W SG Y+KRGY + L S T RWR+LWR++K++KKRI
Sbjct: 42 MDLNGWCNSGNQNMCCCQSYVKRGYDRVLSFNGLITGSK---TPRWRLLWRKIKRDKKRI 101
Query: 61 FSFSCASTRPQVHVPYDPQTYLQNFDQGSSMMAAADPDAISRSFSARFAISSNITFQKAD 115
F C+S VHVPYDP TY QNFDQG ADPD SRSFSARFA+ S + FQK++
Sbjct: 102 --FDCSSGGTDVHVPYDPYTYSQNFDQG---YVWADPDNASRSFSARFAVPSRV-FQKSE 152
BLAST of Sgr016225.1 vs. ExPASy TrEMBL
Match:
V4ST02 (Uncharacterized protein OS=Citrus clementina OX=85681 GN=CICLE_v10026796mg PE=4 SV=1)
HSP 1 Score: 98.6 bits (244), Expect = 1.9e-17
Identity = 59/120 (49.17%), Postives = 73/120 (60.83%), Query Frame = 0
Query: 1 MDLSSWSCSGG------HGYLKRGYYTSVPVAVLACRSSEKTTARWRVLWRRLKKEKKRI 60
MDL+ W SG Y++RGY + L S T RWR+LWR++K+EK+RI
Sbjct: 1 MDLNGWCNSGNQNMCCCQSYVRRGYDRVLSFNGLITGSK---TPRWRLLWRKIKREKERI 60
Query: 61 FSFSCASTRPQVHVPYDPQTYLQNFDQGSSMMAAADPDAISRSFSARFAISSNITFQKAD 115
F C+S VHVPYDP TY QNFDQG ADPD SRSFSARFA+ S + FQK++
Sbjct: 61 --FDCSSGSTNVHVPYDPYTYSQNFDQG---YVWADPDNASRSFSARFAVPSRV-FQKSE 111
BLAST of Sgr016225.1 vs. ExPASy TrEMBL
Match:
A0A061GBI6 (Uncharacterized protein OS=Theobroma cacao OX=3641 GN=TCM_028719 PE=4 SV=1)
HSP 1 Score: 97.1 bits (240), Expect = 5.7e-17
Identity = 61/119 (51.26%), Postives = 74/119 (62.18%), Query Frame = 0
Query: 1 MDLSSWSCSG------GHGYLKRGYYTSVPVAVLACRSSEKTTARWRVLWRRLKKEKKRI 60
M+LS W SG GY K Y + VL RS RWR+LWRRL +EKK+I
Sbjct: 25 MELSKWCSSGTQDLRWSQGYAKSQYDRMHSINVLVTRSK---LPRWRMLWRRLMREKKKI 84
Query: 61 FSFSCASTRPQVHVPYDPQTYLQNFDQGSSMMAAADPDAISRSFSARFAISSNITFQKA 114
F S +STR VHV YDP TY QNFDQG + +ADPD +SRSFSARFA+ S + F+K+
Sbjct: 85 FDCS-SSTR--VHVSYDPYTYAQNFDQG---LMSADPDDLSRSFSARFAVPSRV-FEKS 133
BLAST of Sgr016225.1 vs. ExPASy TrEMBL
Match:
A0A6J1BGX9 (uncharacterized protein LOC110427535 OS=Herrania umbratica OX=108875 GN=LOC110427535 PE=4 SV=1)
HSP 1 Score: 96.7 bits (239), Expect = 7.4e-17
Identity = 58/114 (50.88%), Postives = 71/114 (62.28%), Query Frame = 0
Query: 1 MDLSSWSCSG------GHGYLKRGYYTSVPVAVLACRSSEKTTARWRVLWRRLKKEKKRI 60
M+LS W SG GY K Y + + VL RS RWR+LWR+L +EKK+I
Sbjct: 1 MELSKWCSSGTQDLRWSQGYAKSRYDRMLSIKVLVTRSK---LPRWRMLWRKLMREKKKI 60
Query: 61 FSFSCASTRPQVHVPYDPQTYLQNFDQGSSMMAAADPDAISRSFSARFAISSNI 109
F S +STR VHV YDP TY QNFDQG + +ADPD +SRSFSARFA+ S +
Sbjct: 61 FDCS-SSTR--VHVSYDPCTYAQNFDQG---LMSADPDDLSRSFSARFAVPSRV 105
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
KAG7036482.1 | 1.9e-27 | 65.49 | hypothetical protein SDJN02_00099, partial [Cucurbita argyrosperma subsp. argyro... | [more] |
KAG6606769.1 | 4.3e-27 | 64.60 | hypothetical protein SDJN03_00111, partial [Cucurbita argyrosperma subsp. sorori... | [more] |
KDO51221.1 | 1.1e-17 | 50.83 | hypothetical protein CISIN_1g044132mg [Citrus sinensis] | [more] |
GAY51209.1 | 1.8e-17 | 50.00 | hypothetical protein CUMW_132530 [Citrus unshiu] | [more] |
ESR40256.1 | 4.0e-17 | 49.17 | hypothetical protein CICLE_v10026796mg [Citrus clementina] | [more] |
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A067EJZ4 | 5.1e-18 | 50.83 | Uncharacterized protein OS=Citrus sinensis OX=2711 GN=CISIN_1g044132mg PE=4 SV=1 | [more] |
A0A2H5PFR9 | 8.7e-18 | 50.00 | Uncharacterized protein OS=Citrus unshiu OX=55188 GN=CUMW_132530 PE=4 SV=1 | [more] |
V4ST02 | 1.9e-17 | 49.17 | Uncharacterized protein OS=Citrus clementina OX=85681 GN=CICLE_v10026796mg PE=4 ... | [more] |
A0A061GBI6 | 5.7e-17 | 51.26 | Uncharacterized protein OS=Theobroma cacao OX=3641 GN=TCM_028719 PE=4 SV=1 | [more] |
A0A6J1BGX9 | 7.4e-17 | 50.88 | uncharacterized protein LOC110427535 OS=Herrania umbratica OX=108875 GN=LOC11042... | [more] |
Match Name | E-value | Identity | Description | |